Pregenerated sensors for CCNB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032218Ensembl transcript IDs: ENSMUST00000034742.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGTTCCGGCAGACCAGCTaGGCCTGCAGGAACCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQFRQTS*ACRNRS Trigger: GGACCGGTTCCTGCAGGCTCAGCTGGTCTGCCGGAA...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR TCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCTGGCCCAGCACCTTCTaGGACAGGCAAGAGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFWPSTF*DRQEAA Trigger: CGCTGCCTCTTGCCTGTCTCAGAAGGTGCTGGGCCA...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCGGCTCTCTTCCTTCATaGAGACATCCTCAGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFGSLPS*RHPQGR Trigger: CCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAGCC...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR TCA 90 bp | ATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGGATTGGCCATGTGCTGCATaGCTTCCAGGACTTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: IVGHSTFLQCRVYKHTQDWPCAA*LPGLHS Trigger: AGAGTGAAGTCCTGGAAGTCATGCAGCACATGGCCA...ATCCTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | TCAATACAGAGCAGAGTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATTTGGTGGGCAGAGCTaGTACTTTGGTGTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SIQSRVIVGHSTFLQCRVFGGQS*YFGVLR Trigger: CCTCAGAACACCAAAGTACCAGCTCTGCCCACCAAA...TACTCTACACTGAAGAAATGTAGAATGGCCTACAATAACTCTGCTCTGTATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | ATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGGATGCCAGTCCACCAGGATaGCACGCATACGTCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: IVGHSTFLQCRVYKHTQDASPPG*HAYVHL Trigger: TAAATGGACGTATGCGTGCCATCCTGGTGGACTGGC...ATCCTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGAACTTGGAATGGACTTaGACCAGCCAGTCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQNLEWT*TSQSTR Trigger: CCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTT...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCAGCCGAAACTTGGAATaGACTTGGACCAGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFSRNLE*TWTSQS Trigger: GGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCT...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR TCA 90 bp | TCAATACAGAGCAGAGTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTAGTTTCGGCTGCTTGTTaGCATTTGTCACTTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIQSRVIVGHSTFLQCRVVSAAC*HLSLWW Trigger: CCACCAAAGTGACAAATGTCAACAAGCAGCCGAAAC...TACTCTACACTGAAGAAATGTAGAATGGCCTACAATAACTCTGCTCTGTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR GCA 90 bp | TCAATACAGAGCAGAGTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATTCTTGGCCATGTGCTaGATGACTTCCAGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SIQSRVIVGHSTFLQCRVFLAMC*MTSRTS Trigger: TGAAGTCCTGGAAGTCATGCAGCACATGGCCAAGAA...TACTCTACACTGAAGAAATGTAGAATGGCCTACAATAACTCTGCTCTGTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR GCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCACGTTCTTGGCCATGTaGTGCATGACTTCCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFTFLAM*CMTSRT Trigger: AGTCCTGGAAGTCATGCAGCACATGGCCAAGAACGT...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | TCAATACAGAGCAGAGTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTAGCAGAGCTGGTACTTTaGTGTTCTGAGGTTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SIQSRVIVGHSTFLQCRVAELVL*CSEVSS Trigger: CGAAGAAACCTCAGAACACCAAAGTACCAGCTCTGC...TACTCTACACTGAAGAAATGTAGAATGGCCTACAATAACTCTGCTCTGTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCGCATCAGAGAAAGCTTaGCAGAGGCTCTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFASEKA*QRLSSF Trigger: GAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATGC...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR GCA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGCTATGTCCTCGATCTTaGAGAGCAGAGCATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQLCPRS*RAEHQR Trigger: TCTCTGATGCTCTGCTCTGCAAGATCGAGGACATAG...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCCGCCGGATAGTCACATaGCTCTTGGCTTTAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFRRIVT*LLALGI Trigger: TATTCCTAAAGCCAAGAGCCATGTGACTATCCGGCG...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CCA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCCATTTGTCACTTTGGTaGGCAGAGCTGGTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSIALFSFNTEQSYCRPFHLSLW*AELVLW Trigger: CCAAAGTACCAGCTCTGCCCACCAAAGTGACAAATG...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR GCA 90 bp | ATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGGATATGTACAGAGTTTCCTaGAGAAGCCGAAACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVGHSTFLQCRVYKHTQDMYRVS*RSRNLE Trigger: TTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACAT...ATCCTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS GCA 90 bp | TCCTCAGGGGCGGGAGGACGATCCTTGGGAGCTAGCGCCTCCATCTaGACTGGTTTCACAGAGGCTGTGGGTTTCGGCTGCTTGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: SSGAGGRSLGASASI*TGFTEAVGFGCLLT Trigger: TGTCAACAAGCAGCCGAAACCCACAGCCTCTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 90 bp | TCTCTTCCTTCATGGAGACATCCTCAGGGGCGGGAGGACGATCCTTaGGAGCTAGCGCCTCCATCTGCACTGGTTTCACAGAGGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SLPSWRHPQGREDDP*ELAPPSALVSQRLW Trigger: CCACAGCCTCTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 90 bp | AGAGCAGAGCATCAGAGAAAGCTTGGCAGAGGCTCTCTTCCTTCATaGAGACATCCTCAGGGGCGGGAGGACGATCCTTGGGAGCTAGCG | + |
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Preference number: 5 (lower is better) Translates to: RAEHQRKLGRGSLPS*RHPQGREDDPWELA Trigger: CGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATGCTCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS TCA 90 bp | AGAGCTGTGATCCCGACCAGCTGCAGTTTCTTCCGGCAGACCAGCTaGGCCTGCAGGAACCGGTCCATGATGGCAATGCACATGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: RAVIPTSCSFFRQTS*ACRNRSMMAMHMYR Trigger: TCTGTACATGTGCATTGCCATCATGGACCGGTTCCTGCAGGCTCAGCTGGTCTGCCGGAAGAAACTGCAGCTGGTCGGGATCACAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS TCA 90 bp | GCAGTTTCTTCCGGCAGACCAGCTGAGCCTGCAGGAACCGGTCCATaGTGGCAATGCACATGTACAGAGTTTCCTGCAGAAGCCGAAACT | + |
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Preference number: 5 (lower is better) Translates to: AVSSGRPAEPAGTGP*WQCTCTEFPAEAET Trigger: AGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCATTGCCATCATGGACCGGTTCCTGCAGGCTCAGCTGGTCTGCCGGAAGAAACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS GCA 90 bp | TGCAGGAACCGGTCCATGATGGCAATGCACATGTACAGAGTTTCCTaGAGAAGCCGAAACTTGGAATGGACTTGGACCAGCCAGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: CRNRSMMAMHMYRVS*RSRNLEWTWTSQST Trigger: GGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCATTGCCATCATGGACCGGTTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 90 bp | TTATCTATGTCCTCGATCTTGCAGAGCAGAGCATCAGAGAAAGCTTaGCAGAGGCTCTCTTCCTTCATGGAGACATCCTCAGGGGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: LSMSSILQSRASEKA*QRLSSFMETSSGAG Trigger: TCCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATGCTCTGCTCTGCAAGATCGAGGACATAGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 90 bp | CACATGTACAGAGTTTCCTGCAGAAGCCGAAACTTGGAATGGACTTaGACCAGCCAGTCCACCAGGATGGCACGCATACGTCCATTTATA | + |
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Preference number: 5 (lower is better) Translates to: HMYRVSCRSRNLEWT*TSQSTRMARIRPFI Trigger: TATAAATGGACGTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 90 bp | GAAGCCGAAACTTGGAATGGACTTGGACCAGCCAGTCCACCAGGATaGCACGCATACGTCCATTTATATCTCTTCCATCTAAGAAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: EAETWNGLGPASPPG*HAYVHLYLFHLRSV Trigger: CACACTTCTTAGATGGAAGAGATATAAATGGACGTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGGGGGAGGCCAGGTCTTaGATGATTTTGGAGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQGEARS*MILEFS Trigger: GCTGAACTCCAAAATCATCAAAGACCTGGCCTCCCC...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | TCAATACAGAGCAGAGTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTAGTGGGTTTCGGCTGCTaGTTGACATTTGTCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: SIQSRVIVGHSTFLQCRVVGFGC*LTFVTL Trigger: CAAAGTGACAAATGTCAACAAGCAGCCGAAACCCAC...TACTCTACACTGAAGAAATGTAGAATGGCCTACAATAACTCTGCTCTGTATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGCTGCTGCTGGCATACTaGTTCTTGACAGCGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQLLLAY*FLTAMN Trigger: GTTCATCGCTGTCAAGAACAAGTATGCCAGCAGCAG...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGTTGACATTTGTCACTTaGGTGGGCAGAGCTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQLTFVT*VGRAGT Trigger: AGTACCAGCTCTGCCCACCAAAGTGACAAATGTCAA...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGGGTTTCGGCTGCTTGTaGACATTTGTCACTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQGFGCL*TFVTLV Trigger: CACCAAAGTGACAAATGTCAACAAGCAGCCGAAACC...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | GTTATTGTAGGCCATTCTACATTTCTTCAGTGTAGAGTATACAAACATACACAGCTCCATTTCTCGGATTaGGGAACTGGTGTAAGCATT | + |
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Preference number: 5 (lower is better) Translates to: VIVGHSTFLQCRVYKHTQLHFSD*GTGVSI Trigger: AATGCTTACACCAGTTCCCAAATCCGAGAAATGGAG...CTGTGTATGTTTGTATACTCTACACTGAAGAAATGTAGAATGGCCTACAATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS-3UTR CAA 90 bp | AGATCAATAGCTTTATTTTCCTTCAATACAGAGCAGAGTTATTGTAGGCCATTCTTGGTACGGTTGTCATaGACTTTCACAACGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: RSIALFSFNTEQSYCRPFLVRLS*TFTTFL Trigger: CAAGAACGTTGTGAAAGTCAATGACAACCGTACCAA...GAATGGCCTACAATAACTCTGCTCTGTATTGAAGGAAAATAAAGCTATTGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS GCA 72 bp | GCGGGAGGACGATCCTTGGGAGCTAGCGCCTCCATCTaGACTGGTTTCACAGAGGCTGTGGGTTTCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AGGRSLGASASI*TGFTEAVGFGC Trigger: GCAGCCGAAACCCACAGCCTCTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 72 bp | TCATGGAGACATCCTCAGGGGCGGGAGGACGATCCTTaGGAGCTAGCGCCTCCATCTGCACTGGTTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SWRHPQGREDDP*ELAPPSALVSQ Trigger: CTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 90 bp | CTCTCTTCCTTCATGGAGACATCCTCAGGGGCGGGAGGACGATCCTaGGGAGCTAGCGCCTCCATCTGCACTGGTTTCACAGAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSSFMETSSGAGGRS*GASASICTGFTEAV Trigger: CACAGCCTCTGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | TTCATGGAGACATCCTCAGGGGCGGGAGGACGATCCTaGGGAGCTAGCGCCTCCATCTGCACTGGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: FMETSSGAGGRS*GASASICTGFT Trigger: TGTGAAACCAGTGCAGATGGAGGCGCTAGCTCCCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 72 bp | CATCAGAGAAAGCTTGGCAGAGGCTCTCTTCCTTCATaGAGACATCCTCAGGGGCGGGAGGACGATCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HQRKLGRGSLPS*RHPQGREDDPW Trigger: CCAAGGATCGTCCTCCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS TCA 72 bp | TCCGGCAGACCAGCTGAGCCTGCAGGAACCGGTCCATaGTGGCAATGCACATGTACAGAGTTTCCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SGRPAEPAGTGP*WQCTCTEFPAE Trigger: TTCTGCAGGAAACTCTGTACATGTGCATTGCCATCATGGACCGGTTCCTGCAGGCTCAGCTGGTCTGCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | CAGAGTTTCCTGCAGAAGCCGAAACTTGGAATGGACTaGGACCAGCCAGTCCACCAGGATGGCACGCATACG | + |
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Preference number: 6 (lower is better) Translates to: QSFLQKPKLGMD*DQPVHQDGTHT Trigger: CGTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 72 bp | AGAGTTTCCTGCAGAAGCCGAAACTTGGAATGGACTTaGACCAGCCAGTCCACCAGGATGGCACGCATACGT | + |
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Preference number: 6 (lower is better) Translates to: RVSCRSRNLEWT*TSQSTRMARIR Trigger: ACGTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 90 bp | GTTATCTATGTCCTCGATCTTGCAGAGCAGAGCATCAGAGAAAGCTaGGCAGAGGCTCTCTTCCTTCATGGAGACATCCTCAGGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VIYVLDLAEQSIRES*AEALFLHGDILRGG Trigger: CCCGCCCCTGAGGATGTCTCCATGAAGGAAGAGAGCCTCTGCCAAGCTTTCTCTGATGCTCTGCTCTGCAAGATCGAGGACATAGATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS GCA 72 bp | GGTTCTCCCTGTCCTCGTTATCTATGTCCTCGATCTTaGAGAGCAGAGCATCAGAGAAAGCTTGGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSPCPRYLCPRS*RAEHQRKLGRG Trigger: GCCTCTGCCAAGCTTTCTCTGATGCTCTGCTCTGCAAGATCGAGGACATAGATAACGAGGACAGGGAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 72 bp | TGCACATGTACAGAGTTTCCTGCAGAAGCCGAAACTTaGAATGGACTTGGACCAGCCAGTCCACCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: CTCTEFPAEAET*NGLGPASPPGW Trigger: CCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | GGGTTCTCCCTGTCCTCGTTATCTATGTCCTCGATCTaGCAGAGCAGAGCATCAGAGAAAGCTTGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFSLSSLSMSSI*QSRASEKAWQR Trigger: CCTCTGCCAAGCTTTCTCTGATGCTCTGCTCTGCAAGATCGAGGACATAGATAACGAGGACAGGGAGAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 90 bp | GCACATGTACAGAGTTTCCTGCAGAAGCCGAAACTTGGAATGGACTaGGACCAGCCAGTCCACCAGGATGGCACGCATACGTCCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: AHVQSFLQKPKLGMD*DQPVHQDGTHTSIY Trigger: ATAAATGGACGTATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 90 bp | ATGATGGCAATGCACATGTACAGAGTTTCCTGCAGAAGCCGAAACTaGGAATGGACTTGGACCAGCCAGTCCACCAGGATGGCACGCATA | + |
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Preference number: 6 (lower is better) Translates to: MMAMHMYRVSCRSRN*EWTWTSQSTRMARI Trigger: TATGCGTGCCATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCATTGCCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS GCA 72 bp | CGGTCCATGATGGCAATGCACATGTACAGAGTTTCCTaGAGAAGCCGAAACTTGGAATGGACTTGGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSMMAMHMYRVS*RSRNLEWTWTS Trigger: GCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCATTGCCATCATGGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | ACTGGTTTCACAGAGGCTGTGGGTTTCGGCTGCTTGTaGACATTTGTCACTTTGGTGGGCAGAGCTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: TGFTEAVGFGCL*TFVTLVGRAGT Trigger: AGTACCAGCTCTGCCCACCAAAGTGACAAATGTCAACAAGCAGCCGAAACCCACAGCCTCTGTGAAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | ATGCACATGTACAGAGTTTCCTGCAGAAGCCGAAACTaGGAATGGACTTGGACCAGCCAGTCCACCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: MHMYRVSCRSRN*EWTWTSQSTRM Trigger: CATCCTGGTGGACTGGCTGGTCCAAGTCCATTCCAAGTTTCGGCTTCTGCAGGAAACTCTGTACATGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 90 bp | TTCAGGAGTCTGCTGCTGGCATACTTGTTCTTGACAGCGATGAACTaGGTACGGTTGTCATTGACTTTCACAACGTTCTTGGCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: FRSLLLAYLFLTAMN*VRLSLTFTTFLAMC Trigger: GCACATGGCCAAGAACGTTGTGAAAGTCAATGACAACCGTACCAAGTTCATCGCTGTCAAGAACAAGTATGCCAGCAGCAGACTCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | TTGTTCTTGACAGCGATGAACTTGGTACGGTTGTCATaGACTTTCACAACGTTCTTGGCCATGTGCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: LFLTAMNLVRLS*TFTTFLAMCCM Trigger: CATGCAGCACATGGCCAAGAACGTTGTGAAAGTCAATGACAACCGTACCAAGTTCATCGCTGTCAAGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | GCATACTTGTTCTTGACAGCGATGAACTTGGTACGGTaGTCATTGACTTTCACAACGTTCTTGGCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: AYLFLTAMNLVR*SLTFTTFLAMC Trigger: GCACATGGCCAAGAACGTTGTGAAAGTCAATGACAACCGTACCAAGTTCATCGCTGTCAAGAACAAGTATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CAA 72 bp | CTGCTGCTGGCATACTTGTTCTTGACAGCGATGAACTaGGTACGGTTGTCATTGACTTTCACAACGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLAYLFLTAMN*VRLSLTFTTFL Trigger: CAAGAACGTTGTGAAAGTCAATGACAACCGTACCAAGTTCATCGCTGTCAAGAACAAGTATGCCAGCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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| CDS CCA 72 bp | CCAATTTCTTCTAAAACTGCCCGCCGGATAGTCACATaGCTCTTGGCTTTAGGAATAACTTCTGTGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: PISSKTARRIVT*LLALGITSVSI Trigger: TATTGACACAGAAGTTATTCCTAAAGCCAAGAGCCATGTGACTATCCGGCGGGCAGTTTTAGAAGAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034742.8 |
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