Pregenerated sensors for CCNB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041431Ensembl transcript IDs: ENSMUST00000072119.15, ENSMUST00000091295.14, ENSMUST00000174038.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTTCCAGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTaGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCT | + |
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Preference number: 1 (lower is better) Translates to: LFQVALQDRSGALVW*QPHPSGCQNSKHTP Trigger: AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTaGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTACTATGAA | + |
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Preference number: 1 (lower is better) Translates to: TRQEWRLGMVAATPI*LSEFKAHPWKSYYE Trigger: TTCATAGTAGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 90 bp | ATTCTTTTCCAGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATaGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACC | + |
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Preference number: 1 (lower is better) Translates to: ILFQVALQDRSGALV*WQPHPSGCQNSKHT Trigger: GGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 90 bp | CAAATGAGACAGGATTCTTTTCCAGGTGGCATTACAAGACAGGAGTaGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: QMRQDSFPGGITRQE*RLGMVAATPIWLSE Trigger: TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAAGAATCCTGTCTCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAAGGTGCCAACTGCATCTaGAGATGTAGCAGTCTATTG | + |
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Preference number: 2 (lower is better) Translates to: RQEWRLGMVAATPIWLSEGANCI*RCSSLL Trigger: CAATAGACTGCTACATCTGCAGATGCAGTTGGCACC...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCACATGGTGCCAACTaGATCTGCAGATGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: WWQPHPSGCQNSKHTPGRAHGAN*ICRCSS Trigger: ACTGCTACATCTGCAGATGCAGTTGGCACCATGTGC...TCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAACATTTAAGAACACTGTaGAGGGCACTGAGAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: RQEWRLGMVAATPIWLSEHLRTL*RALREC Trigger: GCATTCTCTCAGTGCCCTCCACAGTGTTCTTAAATG...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAAAAAGGTGGCAACCACTaGAAAATGGAACAAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: RQEWRLGMVAATPIWLSEKGGNH*KMEQRT Trigger: AGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTT...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAACTTGGTTTCAGATCTaGAAGTTGACAAACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TRQEWRLGMVAATPIWLSTWFQI*KLTNQE Trigger: CTCTTGGTTTGTCAACTTTCAGATCTGAAACCAAGT...TGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAAACTTGGTTTCAGATCTaGAAGTTGACAAACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RQEWRLGMVAATPIWLSETWFQI*KLTNQE Trigger: CTCTTGGTTTGTCAACTTTCAGATCTGAAACCAAGT...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACTGGAAGAGCTACTATaGATGAAGCCAAGCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: WRLGMVAATPIWLSEFKALEELL*MKPSKT Trigger: TGTCTTGCTTGGCTTCATTCATAGTAGCTCTTCCAG...TGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATAAAGGTGGCAACCACTaGAAAATGGAACAAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: RWHYKTGVAPWYGGSHTHKGGNH*KMEQRT Trigger: AGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTT...ATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTTTCAGATCTGAAAGTTaGCAAACCAAGAGACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAFRSES*QTKRQW Trigger: CCACTGTCTCTTGGTTTGTCAACTTTCAGATCTGAA...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCAAGTCACAACCTTTATTaGAGAGCAAGTAAACACGGT | + |
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Preference number: 2 (lower is better) Translates to: WRLGMVAATPIWLSEFKASHNLY*RASKHG Trigger: ACCGTGTTTACTTGCTCTTCAATAAAGGTTGTGACT...TGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGAGTTTAAACTAGAGTaGGGCAGAAGACATGATGAT | + |
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Preference number: 2 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPEFKLE*GRRHDD Trigger: ATCATCATGTCTTCTGCCTCACTCTAGTTTAAACTC...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTGTTCACACTAGGAAATaGAATATAGGCATTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAVHTRK*NIGIER Trigger: CCTTTCAATGCCTATATTGCATTTCCTAGTGTGAAC...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | TGGTTAAAGGTGGCAACCACTGGAAAATGGAACAAAGGACTAGCTGGTAGATTTGCACATGGTGCCAACTaGATCTGCAGATGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: WLKVATTGKWNKGLAGRFAHGAN*ICRCSS Trigger: ACTGCTACATCTGCAGATGCAGTTGGCACCATGTGC...AAATCTACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTCTCCTTGGGAGTATATaGATGATTATATCTATACAG | + |
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Preference number: 2 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPLLGSI*MIISIQ Trigger: CTGTATAGATATAATCATGCATATACTCCCAAGGAG...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CCA 90 bp | ATGCACTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACGCAACCACTGGAAAATaGAACAAAGGACTAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MHLNPTEGMTMLHTVCSHATTGK*NKGLAG Trigger: ACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGC...GTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | AGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAACAGGCGGCACATGGTaGCAACTGCATCTGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: RIHPYLLIVRLGGKFFLKTGGTW*QLHLQM Trigger: CATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGT...TTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | AGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAGGTGCCAACTGCATCTaGAGATGTAGCAGTCTATTG | + |
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Preference number: 2 (lower is better) Translates to: RIHPYLLIVRLGGKFFLKGANCI*RCSSLL Trigger: CAATAGACTGCTACATCTGCAGATGCAGTTGGCACC...TTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR GCA 90 bp | ATGCACTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACCTCCTTGGGAGTATATaGATGATTATATCTATACAG | + |
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Preference number: 2 (lower is better) Translates to: MHLNPTEGMTMLHTVCSHLLGSI*MIISIQ Trigger: CTGTATAGATATAATCATGCATATACTCCCAAGGAG...GTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CCA 90 bp | AGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAGCAACCACTGGAAAATaGAACAAAGGACTAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RIHPYLLIVRLGGKFFLKATTGK*NKGLAG Trigger: ACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGC...TTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | AAGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAATTCAGATCTGAAAGTTaGCAAACCAAGAGACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KNTPLSVDSETWGQILFKFRSES*QTKRQW Trigger: CCACTGTCTCTTGGTTTGTCAACTTTCAGATCTGAA...TTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR TCA 90 bp | AGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAAGTCACAACCTTTATTaGAGAGCAAGTAAACACGGT | + |
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Preference number: 2 (lower is better) Translates to: RIHPYLLIVRLGGKFFLKSHNLY*RASKHG Trigger: ACCGTGTTTACTTGCTCTTCAATAAAGGTTGTGACT...TTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 72 bp | GAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTaGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: EWRLGMVAATPI*LSEFKAHPWKS Trigger: GCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 72 bp | CAGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATaGTGGCAGCCACACCCATCTGGCTGTCAGAATTCA | + |
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Preference number: 3 (lower is better) Translates to: QVALQDRSGALV*WQPHPSGCQNS Trigger: TGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 72 bp | TTTTCCAGGTGGCATTACAAGACAGGAGTGGCGCCTTaGTATGGTGGCAGCCACACCCATCTGGCTGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: FSRWHYKTGVAP*YGGSHTHLAVR Trigger: TCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CCA 72 bp | GTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTaGCAGCCACACCCATCTGGCTGTCAGAATTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VALQDRSGALVW*QPHPSGCQNSK Trigger: CTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCATACACCCTTATCTGTaGATAGTGAGACTTGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: LGMVAATPIWLSEFKAHPIHPYL*IVRLGG Trigger: GCCCCCAAGTCTCACTATCAACAGATAAGGGTGTAT...GGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR-3UTR CAA 90 bp | CTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACTAGGAATACACCCTTATCTGTaGATAGTGAGACTTGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: LESHRGNDYVTHSLFTLGIHPYL*IVRLGG Trigger: GCCCCCAAGTCTCACTATCAACAGATAAGGGTGTAT...TCCTAGTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR TCA 72 bp | GTTAAGCTATGTAAAATGAGAAGTCACAACCTTTATTaGAGAGCAAGTAAACACGGTAGGTATCCTATGTAC | + |
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Preference number: 3 (lower is better) Translates to: VKLCKMRSHNLY*RASKHGRYPMY Trigger: GTACATAGGATACCTACCGTGTTTACTTGCTCTTCAATAAAGGTTGTGACTTCTCATTTTACATAGCTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR TCA 72 bp | TCCGTTAGCCTAAACTCAGAAGCAACAACATTCAAATaGGTTAAGCTATGTAAAATGAGAAGTCACAACCTT | + |
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Preference number: 3 (lower is better) Translates to: SVSLNSEATTFK*VKLCKMRSHNL Trigger: AAGGTTGTGACTTCTCATTTTACATAGCTTAACTCATTTGAATGTTGTTGCTTCTGAGTTTAGGCTAACGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | TATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGCTCTACGGAGGAAGTaGAGAGGCAGAGGGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: YGGSHTHLAVRIQSTPLEALRRK*RGRGRP Trigger: GGGTCGCCCTCTGCCTCTGCACTTCCTCCGTAGAGC...TTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR TCA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCATGGCGCCTGCCATACTaGCCTTGGCCTTATTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TRQEWRLGMVAATPIWLSWRLPY*PWPYFL Trigger: CAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCA...TGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CAA 72 bp | CTTTTCCAGGTGGCATTACAAGACAGGAGTGGCGCCTaGGTATGGTGGCAGCCACACCCATCTGGCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LFQVALQDRSGA*VWWQPHPSGCQ Trigger: CTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR TCA 90 bp | AGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATGCCCCAGCTGCAATTTaGGAAGGAGCAAAATGCACC | + |
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Preference number: 4 (lower is better) Translates to: RWHYKTGVAPWYGGSHTHAPAAI*EGAKCT Trigger: GGTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGC...ATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATGTACAGTTCAGCTGTaGCAGCGTGCTGATCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: RQEWRLGMVAATPIWLSECTVQL*QRADLS Trigger: GCTAAGATCAGCACGCTGGCACAGCTGAACTGTACA...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CCA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAAGCAAGTTCCACCTCTaGTTCACACACAGGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: TRQEWRLGMVAATPIWLSSKFHL*FTHRHL Trigger: AAGGTGCCTGTGTGTGAACCAGAGGTGGAACTTGCT...TGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR TCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTGCCCCAGCTGCAATTTaGGAAGGAGCAAAATGCACC | + |
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Preference number: 4 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAAPAAI*EGAKCT Trigger: GGTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGC...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCATATTTGGCCAAAGTGTaGTGCTCGACGTCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TRQEWRLGMVAATPIWLSYLAKV*CSTSTS Trigger: AGAGGTTGACGTCGAGCAGCACACTTTGGCCAAATA...TGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | CAGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCAACATTCTTAGCCAGGTaGTGCATAACAGGAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVALQDRSGALVWWQPHPTFLAR*CITGSR Trigger: CCTGCTTCCTGTTATGCAGCACCTGGCTAAGAATGT...TGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | TGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCATTCTTAGCCAGGTGCTaGATAACAGGAAGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: WRLGMVAATPIWLSEFKAFLARC*ITGSRE Trigger: CTCCCTGCTTCCTGTTATGCAGCACCTGGCTAAGAA...TGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTTGTACAGTTCAGCTGTaGCAGCGTGCTGATCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQPHPSGCQNSKHTPGRACTVQL*QRADLS Trigger: GCTAAGATCAGCACGCTGGCACAGCTGAACTGTACA...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR TCA 90 bp | AAACACGGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCATGGCGCCTGCCATACTaGCCTTGGCCTTATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHGRYPMYRRHMVPTASAWRLPY*PWPYFL Trigger: CAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCA...TGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACCGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTTTTGGTCTAACTGACTaGTCTTCCTCCAGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAFGLTD*SSSSCR Trigger: CCGACAACTGGAGGAAGAGCAGTCAGTTAGACCAAA...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
||
| CDS-3UTR GCA 90 bp | ATGCACTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACGCTCTACGGAGGAAGTaGAGAGGCAGAGGGCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MHLNPTEGMTMLHTVCSHALRRK*RGRGRP Trigger: GGGTCGCCCTCTGCCTCTGCACTTCCTCCGTAGAGC...GTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | CGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACGCAGAAAGCCCCAGCTaGAATTTGAGAAGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGMVAATPIWLSEFKAHAESPS*NLRRSK Trigger: TTTGCTCCTTCTCAAATTGCAGCTGGGGCTTTCTGC...GTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CCA 90 bp | CTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCGCTGTAGCATCTTCTTaGGCACACAACTGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMVAATPIWLSEFKAHPAVASS*AHNCSA Trigger: TGCAGAACAGTTGTGTGCCCAAGAAGATGCTACAGC...GGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR TCA 90 bp | TGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCAACATCAGAGAAAGCCTaGCACAGATACTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRLGMVAATPIWLSEFKATSEKA*HRYSSA Trigger: TGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGT...TGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
||
| CDS-3UTR TCA 90 bp | TGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGTATTTTGGTCTAACTaGCTGCTCTTCCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WWQPHPSGCQNSKHTPGRVFWSN*LLFLQL Trigger: CAACTGGAGGAAGAGCAGTCAGTTAGACCAAAATAC...TCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
||
| CDS-3UTR GCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTACACAGATACTCTTCTaGAGGCGCACATCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPTQILF*RRTSRC Trigger: ACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGT...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
||
| CDS-3UTR GCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTTATTTGGCCAAAGTGTaGTGCTCGACGTCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPYLAKV*CSTSTS Trigger: AGAGGTTGACGTCGAGCAGCACACTTTGGCCAAATA...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGCATTACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCACTTAGCATGCTTAGATaGTGCATACTTGTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVALQDRSGALVWWQPHPLSMLR*CILVLD Trigger: GTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAG...TGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCAGATGTAACATTCTTAGCCAGGTaGTGCATAACAGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRYPMYRRHMVPTASADVTFLAR*CITGSR Trigger: CCTGCTTCCTGTTATGCAGCACCTGGCTAAGAATGT...TACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | AGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTTGGTCTAACTGACTaGTCTTCCAAAATAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQEWRLGMVAATPIWLSEFGLTD*SSKIGS Trigger: TGAACCTATTTTGGAAGAGCAGTCAGTTAGACCAAA...TTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091295.14 |
||
| CDS-3UTR TCA 90 bp | CAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTACTATGTACATGGTCTCCTaGAGCAGCCTAAATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPHPSGCQNSKHTPGRATMYMVS*SSLNFI Trigger: GATGAAATTTAGGCTGCTTCAGGAGACCATGTACAT...AGTAGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | TGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAATCTGTCTGATCTGGTaGTTAGTGTACGTGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WWQPHPSGCQNSKHTPGRICLIW*LVYVLL Trigger: TAACAACACGTACACTAAGCACCAGATCAGACAGAT...TCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTATCTGTCTGATCTGGTaGTTAGTGTACGTGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAICLIW*LVYVLL Trigger: TAACAACACGTACACTAAGCACCAGATCAGACAGAT...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCAGATGTATTCTTGACAGTCATGTaGTTTGTGAGGCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRYPMYRRHMVPTASADVFLTVM*FVRPQF Trigger: GAACTGTGGCCTCACAAAGCACATGACTGTCAAGAA...TACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGTGCTGATCTTAGCATaGTTAGATGCTGCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPVLILA*LDAAYL Trigger: CAAGTATGCAGCATCTAAGCATGCTAAGATCAGCAC...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR TCA 90 bp | GGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCAGATGTAGCCTTAGACAAATTCTaGACTAGTGTACAGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRYPMYRRHMVPTASADVALDKF*TSVQFS Trigger: GCTGAACTGTACACTAGTTCAGAATTTGTCTAAGGC...TACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | CAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTACTAGCATGCTTAGATGCTaGATACTTGTTCTTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPHPSGCQNSKHTPGRATSMLRC*ILVLDS Trigger: ACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCT...AGTAGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTAGCATGCTTAGATGCTaGATACTTGTTCTTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPSMLRC*ILVLDS Trigger: ACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCT...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CCA 90 bp | CTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACTAGGATTCACTACAGAGGTTTaGGTCAGCCCCATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LESHRGNDYVTHSLFTLGFTTEV*VSPIIC Trigger: GCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAA...TCCTAGTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
||
| CDS-3UTR GCA 90 bp | AAACACGGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCACTTGGCCTTATTTTCTaGGTTAATTTTCGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KHGRYPMYRRHMVPTASALGLIF*VNFRVP Trigger: AGGAACACGAAAATTAACGCAGAAAATAAGGCCAAG...TGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACCGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | GCCAAGCAAGACATTAAACATCATTTAAGAACACTGTGGAGGGCACTGAGAGAATTCTTAGCCAGGTGCTaGATAACAGGAAGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQDIKHHLRTLWRALREFLARC*ITGSRE Trigger: CTCCCTGCTTCCTGTTATGCAGCACCTGGCTAAGAA...TTCTCTCAGTGCCCTCCACAGTGTTCTTAAATGATGTTTAATGTCTTGCTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CCA 90 bp | TGGTTAAAGGTGGCAACCACTGGAAAATGGAACAAAGGACTAGCTGGTAGATTTAGCAAGTTCCACCTCTaGTTCACACACAGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKVATTGKWNKGLAGRFSKFHL*FTHRHL Trigger: AAGGTGCCTGTGTGTGAACCAGAGGTGGAACTTGCT...AAATCTACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| 3UTR CAA 72 bp | TTTAAGAACACTGTGGAGGGCACTGAGAGAATGCACTaGAATCCCACCGAGGGAATGACTATGTTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: FKNTVEGTERMH*NPTEGMTMLHT Trigger: TGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCATTCTCTCAGTGCCCTCCACAGTGTTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | GCCAAGCAAGACATTAAACATCATTTAAGAACACTGTGGAGGGCACTGAGAGAAGCAGAAAGCCCCAGCTaGAATTTGAGAAGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQDIKHHLRTLWRALREAESPS*NLRRSK Trigger: TTTGCTCCTTCTCAAATTGCAGCTGGGGCTTTCTGC...TTCTCTCAGTGCCCTCCACAGTGTTCTTAAATGATGTTTAATGTCTTGCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | ATGCACTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACGTGCTGATCTTAGCATaGTTAGATGCTGCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: MHLNPTEGMTMLHTVCSHVLILA*LDAAYL Trigger: CAAGTATGCAGCATCTAAGCATGCTAAGATCAGCAC...GTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR TCA 90 bp | TGGTTAAAGGTGGCAACCACTGGAAAATGGAACAAAGGACTAGCTGGTAGATTTGCCTTAGACAAATTCTaGACTAGTGTACAGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVATTGKWNKGLAGRFALDKF*TSVQFS Trigger: GCTGAACTGTACACTAGTTCAGAATTTGTCTAAGGC...AAATCTACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTTAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR GCA 90 bp | GCCAAGCAAGACATTAAACATCATTTAAGAACACTGTGGAGGGCACTGAGAGAACTCCTCATATTTGCTTaGAATAAACATGGCCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQDIKHHLRTLWRALRELLIFA*NKHGRY Trigger: GTAACGGCCATGTTTATTGCAAGCAAATATGAGGAG...TTCTCTCAGTGCCCTCCACAGTGTTCTTAAATGATGTTTAATGTCTTGCTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | GCCAAGCAAGACATTAAACATCATTTAAGAACACTGTGGAGGGCACTGAGAGAACTTGGCCTTATTTTCTaGGTTAATTTTCGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQDIKHHLRTLWRALRELGLIF*VNFRVP Trigger: AGGAACACGAAAATTAACGCAGAAAATAAGGCCAAG...TTCTCTCAGTGCCCTCCACAGTGTTCTTAAATGATGTTTAATGTCTTGCTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CCA 90 bp | AAGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAGCTGTAGCATCTTCTTaGGCACACAACTGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNTPLSVDSETWGQILFKAVASS*AHNCSA Trigger: TGCAGAACAGTTGTGTGCCCAAGAAGATGCTACAGC...TTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR GCA 90 bp | AAGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAACTTAGCATGCTTAGATaGTGCATACTTGTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNTPLSVDSETWGQILFKLSMLR*CILVLD Trigger: GTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAG...TTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | TGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCAAGCTCCATGAGGTATTaGGCCAAAGTGTGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRLGMVAATPIWLSEFKASSMRY*AKVCCS Trigger: CGAGCAGCACACTTTGGCCAAATACCTCATGGAGCT...TGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTGGTAGTGCTGCAGAGTaGGTGTCCATTCACCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAGSAAE*VSIHRC Trigger: ACAACGGTGAATGGACACCAACTCTGCAGCACTACC...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | CGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACAGCCCCAGCTGCAATTaGAGAAGGAGCAAAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLGMVAATPIWLSEFKAHSPSCN*RRSKMH Trigger: GTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGCT...GTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTAGCCCCAGCTGCAATTaGAGAAGGAGCAAAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WQPHPSGCQNSKHTPGRASPSCN*RRSKMH Trigger: GTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGCT...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | TTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGTAGTGCTGCAGAGTaGGTGTCCATTCACCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVWWQPHPSGCQNSKHTPGSAAE*VSIHRC Trigger: ACAACGGTGAATGGACACCAACTCTGCAGCACTACC...AGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | ACAAGACAGGAGTGGCGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCATTAGATGCTGCATACTaGTTCTTGACAGTCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRQEWRLGMVAATPIWLSLDAAY*FLTVMC Trigger: GCACATGACTGTCAAGAACAAGTATGCAGCATCTAA...TGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | CTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACTAGGAGGTCTCAGCCCGGGCTaGGAAGCAGCAGTAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LESHRGNDYVTHSLFTLGGLSPG*EAAVTV Trigger: GACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACC...TCCTAGTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | TATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAACAGTACCTAGCGTTTTaGCTTCCCTTTTCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YGGSHTHLAVRIQSTPLEQYLAF*LPFSEA Trigger: TGCCTCTGAAAAGGGAAGCAAAAACGCTAGGTACTG...TTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS-3UTR CAA 90 bp | AAACACGGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCAAGCTGTAGCATCTTCTaGGGCACACAACTGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KHGRYPMYRRHMVPTASASCSIF*GTQLFC Trigger: GCAGAACAGTTGTGTGCCCAAGAAGATGCTACAGCT...TGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACCGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS GCA 90 bp | CACTGCAAGGATTACATCAGAGAAAGCCTGACACAGATACTCTTCTaGAGGCGCACATCCAGATGTTTCCATCGGGCTTGGAGAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: HCKDYIRESLTQILF*RRTSRCFHRAWRGI Trigger: AATCCCTCTCCAAGCCCGATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
||
| CDS GCA 90 bp | ACAGAGGTTTGGGTCAGCCCCATCATCTGCGTCTACGTCACTCACTaGAAGGATTACATCAGAGAAAGCCTGACACAGATACTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEVWVSPIICVYVTH*KDYIRESLTQILFC Trigger: GCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS TCA 90 bp | TCTGCGTCTACGTCACTCACTGCAAGGATTACATCAGAGAAAGCCTaGCACAGATACTCTTCTGCAGGCGCACATCCAGATGTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SASTSLTARITSEKA*HRYSSAGAHPDVSI Trigger: GATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
||
| CDS-3UTR CAA 90 bp | CGCCTTGGTATGGTGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACTACATCTCCTCATATTaGCTTGCAATAAACATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLGMVAATPIWLSEFKAHYISSY*LAINMA Trigger: GGCCATGTTTATTGCAAGCAAATATGAGGAGATGTA...GTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CAA 90 bp | TGGCAGCCACACCCATCTGGCTGTCAGAATTCAAAGCACACCCCTGGAAGAGCTTACATCTCCTCATATTaGCTTGCAATAAACATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WQPHPSGCQNSKHTPGRAYISSY*LAINMA Trigger: GGCCATGTTTATTGCAAGCAAATATGAGGAGATGTA...AGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CAA 90 bp | AAACACGGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCATGCTTAGTGTACGTGTaGTTAGTCACAAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KHGRYPMYRRHMVPTASACLVYV*LVTKAK Trigger: CTTCGCCTTTGTGACTAACAACACGTACACTAAGCA...TGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACCGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS TCA 90 bp | TTTTTGCTTCCCTTTTCAGAGGCACTCTTGCCTGTAGCTCTTCGCTaGCTTTATTACCAATGTCTCCAAGAGCAGTTCTCGGTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLLPFSEALLPVALR*LYYQCLQEQFSVSA Trigger: GGCTGAGACCGAGAACTGCTCTTGGAGACATTGGTAATAAAGTCAGCGAAGAGCTACAGGCAAGAGTGCCTCTGAAAAGGGAAGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS GCA 90 bp | ACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATGCTaGATACTTGTTCTTGACAGTCATGTGCTTTGTGAGGCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVQLCQRADLSMLRC*ILVLDSHVLCEATV Trigger: AACTGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS GCA 90 bp | TGTACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATaGTGCATACTTGTTCTTGACAGTCATGTGCTTTGTGAGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CTVQLCQRADLSMLR*CILVLDSHVLCEAT Trigger: TGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS CCA 90 bp | CAGATACTCTTCTGCAGGCGCACATCCAGATGTTTCCATCGGGCTTaGAGAGGGATTATCAACCAAAATAGGTTCAGGAGAAAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QILFCRRTSRCFHRA*RGIINQNRFRRKLL Trigger: GAGAAGCTTTCTCCTGAACCTATTTTGGTTGATAATCCCTCTCCAAGCCCGATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGGTATCCTATGTACAGGCGGCACATGGTGCCAACTGCATCTGCAGATGTATTAGATGCTGCATACTaGTTCTTGACAGTCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRYPMYRRHMVPTASADVLDAAY*FLTVMC Trigger: GCACATGACTGTCAAGAACAAGTATGCAGCATCTAA...TACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS-3UTR CAA 90 bp | ATGCACTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACATTCACTACAGAGGTTaGGGTCAGCCCCATCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: MHLNPTEGMTMLHTVCSHIHYRG*GQPHHL Trigger: CAGATGATGGGGCTGACCCAAACCTCTGTAGTGAAT...GTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072119.15 |
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| CDS GCA 90 bp | TGTACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATaGTGCATACTTGTTCTTGACAGTCCATTCACCGTTGTCAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTVQLCQRADLSMLR*CILVLDSPFTVVKN Trigger: ATTCTTGACAACGGTGAATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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| CDS CCA 90 bp | TCGGAGATAAGCATAGATATCTTTCACATATTCACTACAGAGGTTTaGGTCAGCCCCATCATCTGCGTCTACGTCACTCACTGCAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SEISIDIFHIFTTEV*VSPIICVYVTHCKD Trigger: ATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCTTATCTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS-3UTR CAA 90 bp | AGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAGGTCTCAGCCCGGGCTaGGAAGCAGCAGTAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHPYLLIVRLGGKFFLKGLSPG*EAAVTV Trigger: GACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACC...TTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS GCA 90 bp | ACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATGCTaGATACTTGTTCTTGACAGTCCATTCACCGTTGTCAAGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVQLCQRADLSMLRC*ILVLDSPFTVVKNF Trigger: AAAATTCTTGACAACGGTGAATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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| CDS CCA 90 bp | CTGAAGTTCAGAACTCTGAGAATCTTCATCTCCATCTGTCTGATCTaGTGCTTAGTGTACGTGTTGTTAGTCACAAAGGCGAAGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LKFRTLRIFISICLI*CLVYVLLVTKAKSP Trigger: AGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAGCACCAGATCAGACAGATGGAGATGAAGATTCTCAGAGTTCTGAACTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS-3UTR CAA 90 bp | CTTGAATCCCACCGAGGGAATGACTATGTTACACACAGTTTGTTCACACTAGGATGCTTAGTGTACGTGTaGTTAGTCACAAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LESHRGNDYVTHSLFTLGCLVYV*LVTKAK Trigger: CTTCGCCTTTGTGACTAACAACACGTACACTAAGCA...TCCTAGTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS CCA 90 bp | CTTAGTGTACGTGTTGTTAGTCACAAAGGCGAAGTCACCTATTTCTaGAGGGTACATCTCCTCATATTTGCTTGCAATAAACATGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVRVVSHKGEVTYF*RVHLLIFACNKHGR Trigger: ACGGCCATGTTTATTGCAAGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS-3UTR CAA 90 bp | AAGAATACACCCTTATCTGTTGATAGTGAGACTTGGGGGCAAATTCTTTTTAAAAGCTCCATGAGGTATTaGGCCAAAGTGTGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KNTPLSVDSETWGQILFKSSMRY*AKVCCS Trigger: CGAGCAGCACACTTTGGCCAAATACCTCATGGAGCT...TTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS GCA 72 bp | AGTGTGCTGCTCGACGTCAACCTCTCCGACTTTAGATaGTCTACGGAGGAAGTGCAGAGGCAGAGGGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLDVNLSDFR*STEEVQRQRAT Trigger: GGTCGCCCTCTGCCTCTGCACTTCCTCCGTAGAGCATCTAAAGTCGGAGAGGTTGACGTCGAGCAGCACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | TTATTACCAATGTCTCCAAGAGCAGTTCTCGGTCTCAGCCCGGGCTaGGAAGCAGCAGTAACTGTCACAGGCACACGCTTGGCGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPMSPRAVLGLSPG*EAAVTVTGTRLAPA Trigger: GGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACCGAGAACTGCTCTTGGAGACATTGGTAATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | ATGTCTCCAAGAGCAGTTCTCGGTCTCAGCCCGGGCTaGGAAGCAGCAGTAACTGTCACAGGCACACGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MSPRAVLGLSPG*EAAVTVTGTRL Trigger: CAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACCGAGAACTGCTCTTGGAGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | CTCAGCCCGGGCTTGGAAGCAGCAGTAACTGTCACAGGCACACGCTaGGCGCCTGCCATACTGACCTTGGCCTTATTTTCTGCGTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: LSPGLEAAVTVTGTR*APAILTLALFSALI Trigger: AATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | GGCTTGGAAGCAGCAGTAACTGTCACAGGCACACGCTaGGCGCCTGCCATACTGACCTTGGCCTTATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLEAAVTVTGTR*APAILTLALFS Trigger: AGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | GCAGTAACTGTCACAGGCACACGCTTGGCGCCTGCCATACTGACCTaGGCCTTATTTTCTGCGTTAATTTTCGTGTTCCTAGTGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVTVTGTRLAPAILT*ALFSALIFVFLVTL Trigger: CAGGGTCACTAGGAACACGAAAATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | AGCAGCAGTAACTGTCACAGGCACACGCTTGGCGCCTaGCATACTGACCTTGGCCTTATTTTCTGCGTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSNCHRHTLGA*HTDLGLIFCVN Trigger: ATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | AGCATGGAGAGCTCCATGAGGTATTTGGCCAAAGTGTaGTGCTCGACGTCAACCTCTCCGACTTTAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SMESSMRYLAKV*CSTSTSPTLDA Trigger: AGCATCTAAAGTCGGAGAGGTTGACGTCGAGCAGCACACTTTGGCCAAATACCTCATGGAGCTCTCCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | GATTACATCAGAGAAAGCCTGACACAGATACTCTTCTaGAGGCGCACATCCAGATGTTTCCATCGGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DYIRESLTQILF*RRTSRCFHRAW Trigger: CCAAGCCCGATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | TGGGTCAGCCCCATCATCTGCGTCTACGTCACTCACTaGAAGGATTACATCAGAGAAAGCCTGACACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: WVSPIICVYVTH*KDYIRESLTQI Trigger: TATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | ATGGAGAGCTCCATGAGGTATTTGGCCAAAGTGTGCTaGTCGACGTCAACCTCTCCGACTTTAGATGCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: MESSMRYLAKVC*STSTSPTLDAL Trigger: TAGAGCATCTAAAGTCGGAGAGGTTGACGTCGAGCAGCACACTTTGGCCAAATACCTCATGGAGCTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | GTCACAGGCACACGCTTGGCGCCTGCCATACTGACCTaGGCCTTATTTTCTGCGTTAATTTTCGTGTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: VTGTRLAPAILT*ALFSALIFVFL Trigger: TAGGAACACGAAAATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | CAGGAAGCAGGGAGTCTTCACTGTAGGATAGGTAGTGCTGCAGAGTaGGTGTCCATTCACCGTTGTCAAGAATTTTCAGCGCTAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QEAGSLHCRIGSAAE*VSIHRCQEFSALSR Trigger: TCTGCTTAGCGCTGAAAATTCTTGACAACGGTGAATGGACACCAACTCTGCAGCACTACCTATCCTACAGTGAAGACTCCCTGCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS CAA 90 bp | AGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATGCTGCATACTaGTTCTTGACAGTCATGTGCTTTGTGAGGCCACAGTTCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SCASVLILACLDAAY*FLTVMCFVRPQFTM Trigger: CATGGTGAACTGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS TCA 72 bp | CCCTTTTCAGAGGCACTCTTGCCTGTAGCTCTTCGCTaGCTTTATTACCAATGTCTCCAAGAGCAGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PFSEALLPVALR*LYYQCLQEQFS Trigger: CGAGAACTGCTCTTGGAGACATTGGTAATAAAGTCAGCGAAGAGCTACAGGCAAGAGTGCCTCTGAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS TCA 72 bp | ACGTCACTCACTGCAAGGATTACATCAGAGAAAGCCTaGCACAGATACTCTTCTGCAGGCGCACATCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TSLTARITSEKA*HRYSSAGAHPD Trigger: ATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | CAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATaGTGCATACTTGTTCTTGACAGTCCATTCACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QLCQRADLSMLR*CILVLDSPFTV Trigger: AACGGTGAATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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| CDS CCA 72 bp | TTCTGCAGGCGCACATCCAGATGTTTCCATCGGGCTTaGAGAGGGATTATCAACCAAAATAGGTTCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FCRRTSRCFHRA*RGIINQNRFRR Trigger: TCTCCTGAACCTATTTTGGTTGATAATCCCTCTCCAAGCCCGATGGAAACATCTGGATGTGCGCCTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | GCCAGCGTGCTGATCTTAGCATGCTTAGATGCTGCATACTTGTTCTaGACAGTCATGTGCTTTGTGAGGCCACAGTTCACCATGACTACA | + |
|
Preference number: 6 (lower is better) Translates to: ASVLILACLDAAYLF*TVMCFVRPQFTMTT Trigger: TGTAGTCATGGTGAACTGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS CAA 90 bp | GTCGGAGATAAGCATAGATATCTTTCACATATTCACTACAGAGGTTaGGGTCAGCCCCATCATCTGCGTCTACGTCACTCACTGCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VGDKHRYLSHIHYRG*GQPHHLRLRHSLQG Trigger: TCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCTTATCTCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS CAA 90 bp | ACAAAGGCGAAGTCACCTATTTCTGGAGGGTACATCTCCTCATATTaGCTTGCAATAAACATGGCCGTTACACCGACCAGCTGTAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TKAKSPISGGYISSY*LAINMAVTPTSCSI Trigger: GATGCTACAGCTGGTCGGTGTAACGGCCATGTTTATTGCAAGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | ATATTCACTACAGAGGTTTGGGTCAGCCCCATCATCTaGGTCTACGTCACTCACTGCAAGGATTACATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IFTTEVWVSPII*VYVTHCKDYIR Trigger: TCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS GCA 72 bp | CTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATGCTaGATACTTGTTCTTGACAGTCATGTGCTTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCQRADLSMLRC*ILVLDSHVLCE Trigger: CTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS GCA 72 bp | CAGCTGTGCCAGCGTGCTGATCTTAGCATGCTTAGATaGTGCATACTTGTTCTTGACAGTCATGTGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLCQRADLSMLR*CILVLDSHVLC Trigger: ACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS GCA 72 bp | GTACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATaGTTAGATGCTGCATACTTGTTCTTGACAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: VQFSCASVLILA*LDAAYLFLTVM Trigger: CATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
||
| CDS GCA 72 bp | GTACAGTTCAGCTGTGCCAGCGTGCTGATCTTAGCATaGTTAGATGCTGCATACTTGTTCTTGACAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VQFSCASVLILA*LDAAYLFLTVH Trigger: ATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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| CDS CAA 72 bp | AGCGTGCTGATCTTAGCATGCTTAGATGCTGCATACTaGTTCTTGACAGTCATGTGCTTTGTGAGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: SVLILACLDAAY*FLTVMCFVRPQ Trigger: CTGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS CCA 72 bp | AGCATAGATATCTTTCACATATTCACTACAGAGGTTTaGGTCAGCCCCATCATCTGCGTCTACGTCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SIDIFHIFTTEV*VSPIICVYVTH Trigger: GTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | AAGTCACCTATTTCTGGAGGGTACATCTCCTCATATTaGCTTGCAATAAACATGGCCGTTACACCGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSPISGGYISSY*LAINMAVTPTS Trigger: GCTGGTCGGTGTAACGGCCATGTTTATTGCAAGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | CTGATCTTAGCATGCTTAGATGCTGCATACTTGTTCTaGACAGTCATGTGCTTTGTGAGGCCACAGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: LILACLDAAYLF*TVMCFVRPQFT Trigger: GGTGAACTGTGGCCTCACAAAGCACATGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 |
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| CDS CAA 90 bp | AGAATCTTCATCTCCATCTGTCTGATCTGGTGCTTAGTGTACGTGTaGTTAGTCACAAAGGCGAAGTCACCTATTTCTGGAGGGTACATC | + |
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Preference number: 6 (lower is better) Translates to: RIFISICLIWCLVYV*LVTKAKSPISGGYI Trigger: GATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAGCACCAGATCAGACAGATGGAGATGAAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | AAGCATAGATATCTTTCACATATTCACTACAGAGGTTaGGGTCAGCCCCATCATCTGCGTCTACGTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: KHRYLSHIHYRG*GQPHHLRLRHS Trigger: TGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072119.15 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | ATCTCCATCTGTCTGATCTGGTGCTTAGTGTACGTGTaGTTAGTCACAAAGGCGAAGTCACCTATTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ISICLIWCLVYV*LVTKAKSPISG Trigger: TCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAGCACCAGATCAGACAGATGGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | AGCGTGCTGATCTTAGCATGCTTAGATGCTGCATACTaGTTCTTGACAGTCCATTCACCGTTGTCAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: SVLILACLDAAY*FLTVHSPLSRI Trigger: AATTCTTGACAACGGTGAATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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| CDS CCA 72 bp | CGTGTTGTTAGTCACAAAGGCGAAGTCACCTATTTCTaGAGGGTACATCTCCTCATATTTGCTTGCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: RVVSHKGEVTYF*RVHLLIFACNK Trigger: TTTATTGCAAGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072119.15 ENSMUST00000091295.14 ENSMUST00000174038.2 |
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| CDS CAA 72 bp | CTGATCTTAGCATGCTTAGATGCTGCATACTTGTTCTaGACAGTCCATTCACCGTTGTCAAGAATTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LILACLDAAYLF*TVHSPLSRIFS Trigger: GCTGAAAATTCTTGACAACGGTGAATGGACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174038.2 |
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