Pregenerated sensors for CCN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062074Ensembl transcript IDs: ENSMUST00000076713.6
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTATCCTTATGGCATGAATaGCTTAGCCTTAACCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: CHKYSKLRMVTISVLSPLSLWHE*LSLNLA Trigger: GGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGA...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGCTTGCTGAGTTCTGCTaGTGCAGGGTTCCCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGFPYGMNDLALTLPPCLLAEFC*CRVPRP Trigger: TGGCCGGGGAACCCTGCAGCAGCAGAACTCAGCAAG...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGCTGAGTTCTGCTGCTaGAGGGTTCCCCGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFAAEFCC*RVPRPQ Trigger: CTGTGGCCGGGGAACCCTGCAGCAGCAGAACTCAGC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGTCCCCGGCCACAGTTTaGGGGATCAGTCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGFPYGMNDLALTLPPCLSPATV*GISLPS Trigger: AGAAGGAAGACTGATCCCCCAAACTGTGGCCGGGGA...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGGTCGAGTCTTGTGGTaGACTGCCCTGTGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFAGRVLW*TALCPA Trigger: TGCAGGACACAGGGCAGTGCACCACAAGACTCGACC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGTATCTCCTGGTTCTCTaGAGTCCCTCTGACACACAC | + |
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Preference number: 4 (lower is better) Translates to: QGFPYGMNDLALTLPPCLYLLVL*SPSDTH Trigger: GTGTGTGTCAGAGGGACTGCAGAGAACCAGGAGATA...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTACAGCCAGCTTGGGGATaGAGAGGGGCGTGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLQPAWG*RGACIQ Trigger: TTGGATGCACGCCCCTCTTCATCCCCAAGCTGGCTG...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCCAGGTGTCCCCTGGTTaGTTGGCACAGACTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFAQVSPG*LAQTLQ Trigger: CTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTG...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGGGGGCGTGCATCCAATaGCCCCACTCACACAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKGACIQ*PHSHRG Trigger: GCCTCTGTGTGAGTGGGGCCATTGGATGCACGCCCC...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCTGTCTTGTAGCTTGCTaGGTTCTGCTGCTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFACLVAC*VLLLQG Trigger: ACCCTGCAGCAGCAGAACTCAGCAAGCTACAAGACA...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGACACACACAAGATGTaGCCCACAGCATCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFADTHKM*PTASAT Trigger: AGTGGCAGATGCTGTGGGTCACATCTTGTGTGTGTC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCACTGCCCTGTGTCCTaGAGCAGAGCTGTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKHCPVS*SRAVSA Trigger: GGCTGACACAGCTCTGCTGCAGGACACAGGGCAGTG...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGATACACCTCCAATGCTaGTCCAGGCCGCCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKIHLQC*SRPPSR Trigger: CCTGGAGGGCGGCCTGGAGCAGCATTGGAGGTGTAT...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTCACACAGAGGCAGCTaGACAGTGGGTGGGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKSHRGS*TVGGAE Trigger: TTCAGCCCCACCCACTGTTCAGCTGCCTCTGTGTGA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTCTTGTGGTGCACTaGCCTGTGTCCTGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLSLVVH*PVSCSR Trigger: TCTGCTGCAGGACACAGGGCAGTGCACCACAAGACT...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGGCTTGGCACAGACTTTaGAGCATCCACAGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKAWHRL*SIHSRP Trigger: GGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGC...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCAGCAGGGAGTCCACTTaGTTGCTTGCACGAGACATT | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFASREST*LLARDI Trigger: AATGTCTCGTGCAAGCAACCAAGTGGACTCCCTGCT...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGTTCTCATTTCACAGTTaGCGTTATCGTTGGTTACCC | + |
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Preference number: 4 (lower is better) Translates to: QGFPYGMNDLALTLPPCLFSFHS*RYRWLP Trigger: GGGTAACCAACGATAACGCCAACTGTGAAATGAGAA...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAACAGTGGGTGGGGCTaGAATACTTGGCCATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLNSGWG*NTWPFW Trigger: CCAGAATGGCCAAGTATTTCAGCCCCACCCACTGTT...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTATCTCTGCAGTCCCTCTaGCACACACAAGATGTGACC | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLSLQSL*HTQDVT Trigger: GGTCACATCTTGTGTGTGTCAGAGGGACTGCAGAGA...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAGTGATGTGTTCCTGCTaGAGGGCTGGATGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLVMCSC*RAGCST Trigger: TGTGCTACATCCAGCCCTGCAGCAGGAACACATCAC...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR GCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGTGACCCACAGCATCTaGCACTTAAATGACCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFAVTHSI*HLNDPS Trigger: TGAAGGGTCATTTAAGTGGCAGATGCTGTGGGTCAC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGGTGTCAGCCCAGTCATaGGCAGAGTGCAAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKVSAQS*AECKRG Trigger: TCCTCTTTTGCACTCTGCTCATGACTGGGCTGACAC...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTGTCCCCTGGTTGCTTaGCACAGACTTTGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKCPLVA*HRLCSI Trigger: GATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAGTTACAGGTGTCCCCTaGTTGCTTGGCACAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLVTGVP*LLGTDF Trigger: AAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAAC...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGGAGGCAGCTGAACAGTaGGTGGGGCTGAAATACTTG | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKEAAEQ*VGLKYL Trigger: CAAGTATTTCAGCCCCACCCACTGTTCAGCTGCCTC...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR TCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGAGTTGGAAAGTGGGTTaGCATGTTTCTCCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKSWKVG*HVSPLG Trigger: CCCCAGAGGAGAAACATGTCAACCCACTTTCCAACT...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTGGGGAGTTGGAAAGTaGGTTGACATGTTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKWGVGK*VDMFLL Trigger: GAGGAGAAACATGTCAACCCACTTTCCAACTCCCCA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCCAAATTTTTCAGCTTTaGGGAGTTGGAAAGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: KLRMVTISVLSPLSKLFAQIFQL*GVGKWV Trigger: AACCCACTTTCCAACTCCCCAAAGCTGAAAAATTTG...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAATATTCCACAGAAAGTaGGTCTGTAACTCTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CHKYSKLRMVTISVLSPLIFHRK*VCNSEC Trigger: GCACTCAGAGTTACAGACCCACTTTCTGTGGAATAT...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CCA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGAGAAAATATATCTCCTaGTTCTCTGCAGTCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KYSKLRMVTISVLSPLSKRKYIS*FSAVPL Trigger: CAGAGGGACTGCAGAGAACCAGGAGATATATTTTCT...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 90 bp | GCCTTTGTGGGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTaGTTGCTTGGCACAGACTTTGCAGCATCCACAGCCGTCCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: AFVGVADLGFVTGVP*LLGTDFAASTAVPH Trigger: GTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCCCACAAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 90 bp | TCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTTGGCACAGACTTTaGAGCATCCACAGCCGTCCCTCACCAAACTCACCCCAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SRLRYRCPLVAWHRL*SIHSRPSPNSPQED Trigger: GTCCTCCTGGGGTGAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 90 bp | GGGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTTaGCACAGACTTTGCAGCATCCACAGCCGTCCCTCACCAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: GGRRSRLRYRCPLVA*HRLCSIHSRPSPNS Trigger: TGAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 90 bp | TTGTGGGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTaGTTGGCACAGACTTTGCAGCATCCACAGCCGTCCCTCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: LWGSQISASLQVSPG*LAQTLQHPQPSLTK Trigger: TTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 90 bp | GGGCGTGCATCCAATGGCCCCACTCACACAGAGGCAGCTGAACAGTaGGTGGGGCTGAAATACTTGGCCATTCTGGTAATAGACCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GRASNGPTHTEAAEQ*VGLKYLAILVIDPV Trigger: AACAGGGTCTATTACCAGAATGGCCAAGTATTTCAGCCCCACCCACTGTTCAGCTGCCTCTGTGTGAGTGGGGCCATTGGATGCACGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 90 bp | GAAAGTGGGTTGACATGTTTCTCCTCTGGGGATCTTCACTGCCTGTaGTGTGTTCCTGCTGCAGGGCTGGATGTAGCACAGCCTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ESGLTCFSSGDLHCL*CVPAAGLDVAQPPL Trigger: GAGAGGAGGCTGTGCTACATCCAGCCCTGCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAGAAACATGTCAACCCACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 90 bp | CTGGTAATAGACCCTGTTGAACTCACATCCAACTGCCACAAGATATaGGCACACGCCTGTCTCGTACCTAGGCGTGTCCCCGGAGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: LVIDPVELTSNCHKI*AHACLVPRRVPGVV Trigger: GACTACTCCGGGGACACGCCTAGGTACGAGACAGGCGTGTGCGCATATCTTGTGGCAGTTGGATGTGAGTTCAACAGGGTCTATTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 90 bp | ATGTTTCTCCTCTGGGGATCTTCACTGCCTGTGATGTGTTCCTGCTaGAGGGCTGGATGTAGCACAGCCTCCTCTCCTTTCTCATTTCAC | + |
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Preference number: 5 (lower is better) Translates to: MFLLWGSSLPVMCSC*RAGCSTASSPFSFH Trigger: GTGAAATGAGAAAGGAGAGGAGGCTGTGCTACATCCAGCCCTGCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAGAAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 90 bp | GACATGTTTCTCCTCTGGGGATCTTCACTGCCTGTGATGTGTTCCTaGTGCAGGGCTGGATGTAGCACAGCCTCCTCTCCTTTCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: DMFLLWGSSLPVMCS*CRAGCSTASSPFSF Trigger: AAATGAGAAAGGAGAGGAGGCTGTGCTACATCCAGCCCTGCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAGAAACATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 90 bp | TTTCAGCTTTGGGGAGTTGGAAAGTGGGTTGACATGTTTCTCCTCTaGGGATCTTCACTGCCTGTGATGTGTTCCTGCTGCAGGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: FQLWGVGKWVDMFLL*GSSLPVMCSCCRAG Trigger: TCCAGCCCTGCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAGAAACATGTCAACCCACTTTCCAACTCCCCAAAGCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 90 bp | GTGGGTGGGGCTGAAATACTTGGCCATTCTGGTAATAGACCCTGTTaGACTCACATCCAACTGCCACAAGATATGCGCACACGCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: VGGAEILGHSGNRPC*THIQLPQDMRTRLS Trigger: AGACAGGCGTGTGCGCATATCTTGTGGCAGTTGGATGTGAGTTCAACAGGGTCTATTACCAGAATGGCCAAGTATTTCAGCCCCACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGTCACAGTACAGGCCTTaGTGGGGGTCGCAGATCTCG | + |
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Preference number: 5 (lower is better) Translates to: QGFPYGMNDLALTLPPCLSQYRP*WGSQIS Trigger: CGAGATCTGCGACCCCCACAAAGGCCTGTACTGTGA...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGTGTCCCCTGGTTGCTaGGCACAGACTTTGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAVSPGC*AQTLQH Trigger: ATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACAC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCACAGGTGTCCCCTGGTaGCTTGGCACAGACTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFATGVPW*LGTDFA Trigger: TGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGT...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGGTGGGGCTGAAATACTaGGCCATTCTGGTAATAGAC | + |
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Preference number: 5 (lower is better) Translates to: QGFPYGMNDLALTLPPCLVGLKY*AILVID Trigger: GTCTATTACCAGAATGGCCAAGTATTTCAGCCCCAC...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTTGCTGCCAGCCAGCTaGGGGATGAAGAGGGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: KYSKLRMVTISVLSPLSKLLPAS*GMKRGV Trigger: CACGCCCCTCTTCATCCCCAAGCTGGCTGGCAGCAA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTTCCTTATGGCATGAATGACTTAGCCTTAACCTTGCCTCCCTGTTTGACATTGTCTTGTAGCTaGCTGAGTTCTGCTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QGFPYGMNDLALTLPPCLTLSCS*LSSAAA Trigger: TGCAGCAGCAGAACTCAGCAAGCTACAAGACAATGT...CAAACAGGGAGGCAAGGTTAAGGCTAAGTCATTCATGCCATAAGGAAAACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGAGCAGGGAGTCCACTaGGTTGCTTGCACGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAEQGVH*VACTRH Trigger: ATGTCTCGTGCAAGCAACCAAGTGGACTCCCTGCTC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 90 bp | CCTCTGACACACACAAGATGTGACCCACAGCATCTGCCACTTAAATaGCCCTTCACTGGGGCAGTCAAACCTAACAGTAATCATTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: PLTHTRCDPQHLPLK*PFTGAVKPNSNHFR Trigger: TCTAAAATGATTACTGTTAGGTTTGACTGCCCCAGTGAAGGGTCATTTAAGTGGCAGATGCTGTGGGTCACATCTTGTGTGTGTCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTATGCTTGGCACAGACTTaGCAGCATCCACAGCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: CHKYSKLRMVTISVLSPLCLAQT*QHPQPS Trigger: GGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCA...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTATTCCCCGGCCACAGTTaGGGGGATCAGTCTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CHKYSKLRMVTISVLSPLFPGHS*GDQSSF Trigger: GAAGGAAGACTGATCCCCCAAACTGTGGCCGGGGAA...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTTAGCTGCAGAACAGTaGCTGCCAGCCAGCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KYSKLRMVTISVLSPLSKLAAEQ*LPASLG Trigger: CCCCAAGCTGGCTGGCAGCAACTGTTCTGCAGCTAA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGAGTTGGAAAGTGGGTaGACATGTTTCTCCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAELESG*TCFSSG Trigger: CCCAGAGGAGAAACATGTCAACCCACTTTCCAACTC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCTTCAGCTTTGGGGAGTaGGAAAGTGGGTTGACATGT | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAFSFGE*ESGLTC Trigger: ACATGTCAACCCACTTTCCAACTCCCCAAAGCTGAA...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | TGTCACAAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAGGGACACAGCATCTCTaGTCCAGGCATATTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: CHKYSKLRMVTISVLSPLGTQHL*SRHIPQ Trigger: CTGTGGAATATGCCTGGACAAGAGATGCTGTGTCCC...TAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCATCATTTTAGATTTGTaGGGGACACAGCATCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAIILDL*GTQHLL Trigger: CAAGAGATGCTGTGTCCCCAACAAATCTAAAATGAT...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGCTTTTCGCCGTAATCATTTTAGATTaGTTGGGGACACAGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: KLRMVTISVLSPLSKLFAVIILD*LGTQHL Trigger: GAGATGCTGTGTCCCCAACAAATCTAAAATGATTAC...GGCGAAAAGCTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTCCTATAAGCTGACATaGTCTTGTAGCTTGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KYSKLRMVTISVLSPLSKSYKLT*SCSLLS Trigger: ACTCAGCAAGCTACAAGACAATGTCAGCTTATAGGA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGTTTCTCATTTCACAGTaGGCGTTATCGTTGGTTACC | + |
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Preference number: 5 (lower is better) Translates to: KYSKLRMVTISVLSPLSKFLISQ*ALSLVT Trigger: GGTAACCAACGATAACGCCAACTGTGAAATGAGAAA...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS-3UTR CAA 90 bp | AAATATAGCAAGCTAAGAATGGTCACTATCTCTGTGTTAAGTCCCTTAAGTAAGACAAATTTTTCAGCTTaGGGGAGTTGGAAAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: KYSKLRMVTISVLSPLSKTNFSA*GSWKVG Trigger: ACCCACTTTCCAACTCCCCAAAGCTGAAAAATTTGT...CTTACTTAAGGGACTTAACACAGAGATAGTGACCATTCTTAGCTTGCTATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 72 bp | GGGCATCTGCAGGGCCAGCGGCAGACCTCTGTACGCTaGTACACCTCCAATGCTGCTCCAGGCCGCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GHLQGQRQTSVR*YTSNAAPGRPP Trigger: TGGAGGGCGGCCTGGAGCAGCATTGGAGGTGTATCAGCGTACAGAGGTCTGCCGCTGGCCCTGCAGATGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 72 bp | TGCTCCAGGCCGCCCTCCAGGGGTCGAGTCTTGTGGTaGACTGCCCTGTGTCCTGCAGCAGAGCTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: CSRPPSRGRVLW*TALCPAAELCQ Trigger: CTGACACAGCTCTGCTGCAGGACACAGGGCAGTGCACCACAAGACTCGACCCCTGGAGGGCGGCCTGGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 72 bp | GGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTaGTTGCTTGGCACAGACTTTGCAGCATCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVADLGFVTGVP*LLGTDFAASTA Trigger: GGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 90 bp | TGGGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTaGGCACAGACTTTGCAGCATCCACAGCCGTCCCTCACCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: WGSQISASLQVSPGC*AQTLQHPQPSLTKL Trigger: GAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 90 bp | ATCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTTGGCACAGACTTaGCAGCATCCACAGCCGTCCCTCACCAAACTCACCCCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ISASLQVSPGCLAQT*QHPQPSLTKLTPGG Trigger: TCCTCCTGGGGTGAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 90 bp | TTTGTGGGGGTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTaGCTTGGCACAGACTTTGCAGCATCCACAGCCGTCCCTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: FVGVADLGFVTGVPW*LGTDFAASTAVPHQ Trigger: TTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGACCCCCACAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 72 bp | CGTTACAGGTGTCCCCTGGTTGCTTGGCACAGACTTTaGAGCATCCACAGCCGTCCCTCACCAAACTCACCC | + |
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Preference number: 6 (lower is better) Translates to: RYRCPLVAWHRL*SIHSRPSPNSP Trigger: GGGTGAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 72 bp | TCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTaGTTGGCACAGACTTTGCAGCATCCACAGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SQISASLQVSPG*LAQTLQHPQPS Trigger: GGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 72 bp | CTCCTCTGGGGATCTTCACTGCCTGTGATGTGTTCCTaGTGCAGGGCTGGATGTAGCACAGCCTCCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLWGSSLPVMCS*CRAGCSTASSP Trigger: AGGAGAGGAGGCTGTGCTACATCCAGCCCTGCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 72 bp | CAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTaGGCACAGACTTTGCAGCATCCACAGCCGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QISASLQVSPGC*AQTLQHPQPSL Trigger: GAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 72 bp | GTCGCAGATCTCGGCTTCGTTACAGGTGTCCCCTGGTaGCTTGGCACAGACTTTGCAGCATCCACAGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: VADLGFVTGVPW*LGTDFAASTAV Trigger: GACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCTGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 72 bp | AGATCTCGGCTTCGTTACAGGTGTCCCCTGGTTGCTTaGCACAGACTTTGCAGCATCCACAGCCGTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSRLRYRCPLVA*HRLCSIHSRPS Trigger: TGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGAAGCCGAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 72 bp | TCGTTACAGGTGTCCCCTGGTTGCTTGGCACAGACTTaGCAGCATCCACAGCCGTCCCTCACCAAACTCACC | + |
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Preference number: 6 (lower is better) Translates to: SLQVSPGCLAQT*QHPQPSLTKLT Trigger: GGTGAGTTTGGTGAGGGACGGCTGTGGATGCTGCAAAGTCTGTGCCAAGCAACCAGGGGACACCTGTAACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 72 bp | GGATCAGTCTTCCTTCTTCCTTTAGCTGCAGAACAGTaGCTGCCAGCCAGCTTGGGGATGAAGAGGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GSVFLLPLAAEQ*LPASLGMKRGV Trigger: CACGCCCCTCTTCATCCCCAAGCTGGCTGGCAGCAACTGTTCTGCAGCTAAAGGAAGAAGGAAGACTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CCA 72 bp | TGGGGAGTTGGAAAGTGGGTTGACATGTTTCTCCTCTaGGGATCTTCACTGCCTGTGATGTGTTCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WGVGKWVDMFLL*GSSLPVMCSCC Trigger: GCAGCAGGAACACATCACAGGCAGTGAAGATCCCCAGAGGAGAAACATGTCAACCCACTTTCCAACTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 90 bp | CCCACTCACACAGAGGCAGCTGAACAGTGGGTGGGGCTGAAATACTaGGCCATTCTGGTAATAGACCCTGTTGAACTCACATCCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: PTHTEAAEQWVGLKY*AILVIDPVELTSNC Trigger: GCAGTTGGATGTGAGTTCAACAGGGTCTATTACCAGAATGGCCAAGTATTTCAGCCCCACCCACTGTTCAGCTGCCTCTGTGTGAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS GCA 72 bp | ATTCTGGTAATAGACCCTGTTGAACTCACATCCAACTaGCACAAGATATGCGCACACGCCTGTCTCGTACCT | + |
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Preference number: 6 (lower is better) Translates to: ILVIDPVELTSN*HKICAHACLVP Trigger: AGGTACGAGACAGGCGTGTGCGCATATCTTGTGGCAGTTGGATGTGAGTTCAACAGGGTCTATTACCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 72 bp | CACACAAGATGTGACCCACAGCATCTGCCACTTAAATaGCCCTTCACTGGGGCAGTCAAACCTAACAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HTRCDPQHLPLK*PFTGAVKPNSN Trigger: ATTACTGTTAGGTTTGACTGCCCCAGTGAAGGGTCATTTAAGTGGCAGATGCTGTGGGTCACATCTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS CAA 72 bp | CTCCTCTCCTTTCTCATTTCACAGTTGGCGTTATCGTaGGTTACCCGGTTAGAAATTCCCATTCCGCACGTT | + |
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Preference number: 6 (lower is better) Translates to: LLSFLISQLALS*VTRLEIPIPHV Trigger: AACGTGCGGAATGGGAATTTCTAACCGGGTAACCAACGATAACGCCAACTGTGAAATGAGAAAGGAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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| CDS TCA 72 bp | GCTGAAATACTTGGCCATTCTGGTAATAGACCCTGTTaGACTCACATCCAACTGCCACAAGATATGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: AEILGHSGNRPC*THIQLPQDMRT Trigger: TGTGCGCATATCTTGTGGCAGTTGGATGTGAGTTCAACAGGGTCTATTACCAGAATGGCCAAGTATTTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076713.6 |
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