Pregenerated sensors for CCN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027656Ensembl transcript IDs: ENSMUST00000029188.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCAGAAGCCTGGGTCAGAATCCAGAGAAATGGAGCTGGTCACCTaGTTCCCCCACCTCAGACAGAGCAGGGATCGCTCAGAGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TQKPGSESREMELVT*FPHLRQSRDRSEAL Trigger: CAGAGCCTCTGAGCGATCCCTGCTCTGTCTGAGGTGGGGGAAGCAGGTGACCAGCTCCATTTCTCTGGATTCTGACCCAGGCTTCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR GCA 90 bp | ATCGCTCAGAGGCTCTGGACACTGAATCCACCCAGGACAGTTAACTaGAGCCAAGAGCATGGAGAGGGGCATCTACCATCAGTCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: IAQRLWTLNPPRTVN*SQEHGEGHLPSVQG Trigger: GCCCTGGACTGATGGTAGATGCCCCTCTCCATGCTCTTGGCTGCAGTTAACTGTCCTGGGTGGATTCAGTGTCCAGAGCCTCTGAGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR TCA 90 bp | GTCCTCCAGAGGAGGGTACTCTACTGTTCCTTGTCTCTCTCATGCTaGAGAGAAAGGCCCTGGCCTGCCAGAAGTGTGGAGCCTCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: VLQRRVLYCSLSLSC*RERPWPARSVEPLA Trigger: AGCAAGAGGCTCCACACTTCTGGCAGGCCAGGGCCTTTCTCTTCAGCATGAGAGAGACAAGGAACAGTAGAGTACCCTCCTCTGGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR GCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTaGTGCCTGGTACCTATTACTGTCACTATCCCCAGCATGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: KHIEVQEGTWMFQAI*CLVPITVTIPSMVA Trigger: GGCCACCATGCTGGGGATAGTGACAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CCA 90 bp | ACCCATAATCTTTGGGACAAGCACATAGAAGTCCAAGAAGGGACCTaGATGTTTCAGGCAATCTGCTGCCTGGTACCTATTACTGTCACT | + |
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Preference number: 1 (lower is better) Translates to: THNLWDKHIEVQEGT*MFQAICCLVPITVT Trigger: AGTGACAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTTGTCCCAAAGATTATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CCA 90 bp | TGTCTCTCTCATGCTGAAGAGAAAGGCCCTGGCCTGCCAGAAGTGTaGAGCCTCTTGCTTTGTGAGCATTTAAGAGATGTGTATTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: CLSHAEEKGPGLPEV*SLLLCEHLRDVYFY Trigger: GTAAAAATACACATCTCTTAAATGCTCACAAAGCAAGAGGCTCCACACTTCTGGCAGGCCAGGGCCTTTCTCTTCAGCATGAGAGAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAGAATCCAGAGAAATGGAGCCTAGGGACATTTGCTaGGAATGGCAGGCCCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: EELARRTQKPGSESREMEPRDIC*EWQALY Trigger: ATACAGGGCCTGCCATTCTCAGCAAATGTCCCTAGG...CTCCATTTCTCTGGATTCTGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATACAGGGAAGTTTTGAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAATGGAGCTGGTCACCTaGTTCCCCCACCTCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: FIQGSFEELARRTQKPGSMELVT*FPHLRQ Trigger: CTGTCTGAGGTGGGGGAAGCAGGTGACCAGCTCCAT...TGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTCAAAACTTCCCTGTATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGTCACTATCCCCAGCATaGTGGCCAGGCTTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KHIEVQEGTWMFQAICCLSLSPA*WPGLPS Trigger: ACTGGGCAAGCCTGGCCACCATGCTGGGGATAGTGA...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGCATACAGGGAAGTTTTaGGGAACTAGCCAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KHIEVQEGTWMFQAICCLHTGKF*GTSQEN Trigger: GTTCTCCTGGCTAGTTCCTCAAAACTTCCCTGTATG...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CAA 90 bp | ATGGTGGCCAGGCTTGCCCAGTACAGCTTAGCTTTAAAGGTCCTTTaGGTTGTCCTTTTCATACAGGGAAGTTTTGAGGAACTAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: MVARLAQYSLALKVL*VVLFIQGSFEELAR Trigger: CCTGGCTAGTTCCTCAAAACTTCCCTGTATGAAAAGGACAACCAAAAGGACCTTTAAAGCTAAGCTGTACTGGGCAAGCCTGGCCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR CCA 90 bp | GCATTTAAGAGATGTGTATTTTTACAAATACAAAGGTCAAGTTCCTGGACTTGGCTATCCCCAGCATGGTaGCCAGGCTTGCCCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: AFKRCVFLQIQRSSSWTWLSPAW*PGLPST Trigger: TGTACTGGGCAAGCCTGGCCACCATGCTGGGGATAG...CCAAGTCCAGGAACTTGACCTTTGTATTTGTAAAAATACACATCTCTTAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATAGTGTGATTCCATCTCTTCATGTTCCCAGAAAATTCTTCCCAGCCGGGAGGCAATCTGCTGCCTaGTACCTATTACTGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: KNSVIPSLHVPRKFFPAGRQSAA*YLLLSL Trigger: TAGTGACAGTAATAGGTACCAGGCAGCAGATTGCCT...CCCGGCTGGGAAGAATTTTCTGGGAACATGAAGAGATGGAATCACACTATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGAATAGTGTGATTCCATCTCTTCATGTTCCCAGAAAATTCTTCCCAGCCATGTTTCAGGCAATCTaGTGCCTGGTACCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: LKNSVIPSLHVPRKFFPAMFQAI*CLVPIT Trigger: AGTAATAGGTACCAGGCAGCAGATTGCCTGAAACAT...GGCTGGGAAGAATTTTCTGGGAACATGAAGAGATGGAATCACACTATTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR TCA 72 bp | ACCATCAGTCCAGGGCCTGGTCCTAGGGACATTTGCTaGGAATGGCAGGCCCTGTATCCACATCCCCGCAAT | + |
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Preference number: 3 (lower is better) Translates to: TISPGPGPRDIC*EWQALYPHPRN Trigger: ATTGCGGGGATGTGGATACAGGGCCTGCCATTCTCAGCAAATGTCCCTAGGACCAGGCCCTGGACTGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR GCA 72 bp | AGGCTCTGGACACTGAATCCACCCAGGACAGTTAACTaGAGCCAAGAGCATGGAGAGGGGCATCTACCATCA | + |
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Preference number: 3 (lower is better) Translates to: RLWTLNPPRTVN*SQEHGEGHLPS Trigger: TGATGGTAGATGCCCCTCTCCATGCTCTTGGCTGCAGTTAACTGTCCTGGGTGGATTCAGTGTCCAGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR GCA 72 bp | GTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTaGCTGGTACCTATTACTGTCACTATCCCCAGCATG | + |
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Preference number: 3 (lower is better) Translates to: VQEGTWMFQAIC*LVPITVTIPSM Trigger: CATGCTGGGGATAGTGACAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR GCA 72 bp | GAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTaGTGCCTGGTACCTATTACTGTCACTATCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: EVQEGTWMFQAI*CLVPITVTIPS Trigger: GCTGGGGATAGTGACAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CCA 72 bp | AAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTaGTACCTATTACTGTCACTATCCCCAGCATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KKGPGCFRQSAA*YLLLSLSPAWW Trigger: CCACCATGCTGGGGATAGTGACAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CCA 72 bp | CATGCTGAAGAGAAAGGCCCTGGCCTGCCAGAAGTGTaGAGCCTCTTGCTTTGTGAGCATTTAAGAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: HAEEKGPGLPEV*SLLLCEHLRDV Trigger: CACATCTCTTAAATGCTCACAAAGCAAGAGGCTCCACACTTCTGGCAGGCCAGGGCCTTTCTCTTCAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CCA 72 bp | CTTTGGGACAAGCACATAGAAGTCCAAGAAGGGACCTaGATGTTTCAGGCAATCTGCTGCCTGGTACCTATT | + |
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Preference number: 3 (lower is better) Translates to: LWDKHIEVQEGT*MFQAICCLVPI Trigger: AATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTTGTCCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | GAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAGAATCCAGAGAAATGGAGGCCGTGGCTCCTGGATaGCAGGCAGGGTCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: EELARRTQKPGSESREMEAVAPG*QAGSGQ Trigger: CTGTCCAGACCCTGCCTGGCATCCAGGAGCCACGGC...CTCCATTTCTCTGGATTCTGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | GAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAGAATCCAGAGAAATGGAGATGAGCCGTGGCTCCTaGATGCCAGGCAGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EELARRTQKPGSESREMEMSRGS*MPGRVW Trigger: CCAGACCCTGCCTGGCATCCAGGAGCCACGGCTCAT...CTCCATTTCTCTGGATTCTGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGACGGCCACTGGGGCCTaGCCCAGGCTGACAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: KHIEVQEGTWMFQAICCLTATGA*PRLTNQ Trigger: CTGGTTTGTCAGCCTGGGGCAGGCCCCAGTGGCCGT...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | ATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGGTACCTGTGGGCAGTCCCAGCTaGGCAGCCGCACATCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: IEVQEGTWMFQAICCLVPVGSPS*AAAHPH Trigger: GTGAGGATGTGCGGCTGCCCAGCTGGGACTGCCCAC...AGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCAGAAGTGTGGAGCCTCTTGCTTTGTGAGCATTTAAGAGATGTGTATCTCCCCCAGCCTCCGTaGACACACTCGACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLPEVWSLLLCEHLRDVYLPQPP*THSTAA Trigger: GGCTGCTGTCGAGTGTGTGCACGGAGGCTGGGGGAG...ATACACATCTCTTAAATGCTCACAAAGCAAGAGGCTCCACACTTCTGGCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | CCTCCAGAGGAGGGTACTCTACTGTTCCTTGTCTCTCTCATGCTGAAGAGAAAGCGGTGGGCACTGGGGTaGTGTCCAAGGACAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: PPEEGTLLFLVSLMLKRKRWALG*CPRTGT Trigger: TGTGCCTGTCCTTGGACACCACCCCAGTGCCCACCG...CTTTCTCTTCAGCATGAGAGAGACAAGGAACAGTAGAGTACCCTCCTCTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGTATTCTCCTGGGGCGTaGGCAGTCCCAGCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KHIEVQEGTWMFQAICCLYSPGA*AVPAGQ Trigger: CTGCCCAGCTGGGACTGCCCACGCCCCAGGAGAATA...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | TCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGGTACCTATTACTGGGCTGCATCACTGCCTaGTCACACACCCACTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKKGPGCFRQSAAWYLLLGCITA*SHTHSG Trigger: CCCCGAGTGGGTGTGTGACCAGGCAGTGATGCAGCC...CAGTAATAGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGGTACCTAGGACAGGCACAGGGTaGTGGGCACAGCTGGGCATA | + |
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Preference number: 4 (lower is better) Translates to: IEVQEGTWMFQAICCLVPRTGTG*WAQLGI Trigger: TATGCCCAGCTGTGCCCAGCACCCTGTGCCTGTCCT...AGGTACCAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | TTCATACAGGGAAGTTTTGAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAGGGGCCATCGGCAGATaGAGGAGTGACAAGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FIQGSFEELARRTQKPGSGAIGR*RSDKGR Trigger: TCTGCCCTTGTCACTCCTGCATCTGCCGATGGCCCC...TGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTCAAAACTTCCCTGTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | GAGGAACTAGCCAGGAGAACCCAGAAGCCTGGGTCAGAATCCAGAGAAATGGAGGAAAGTTGGTGTCCTTaGGCTGAGGAGGGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: EELARRTQKPGSESREMEESWCP*AEEGWI Trigger: AATCCAGCCCTCCTCAGCCCAAGGACACCAACTTTC...CTCCATTTCTCTGGATTCTGACCCAGGCTTCTGGGTTCTCCTGGCTAGTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCTGGACACTGAATCCACCCAGGACAGTTAACTGCAGCCAAGAGCATGGAACAAGGGCAGAAAGTTaGTGTCCTTGGGCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLWTLNPPRTVNCSQEHGTRAES*CPWAEE Trigger: CTCCTCAGCCCAAGGACACCAACTTTCTGCCCTTGT...TCCATGCTCTTGGCTGCAGTTAACTGTCCTGGGTGGATTCAGTGTCCAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCTGGACACTGAATCCACCCAGGACAGTTAACTGCAGCCAAGAGCATGGACGCTGGATCTCCAGTTaGCAGAATCGGTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RLWTLNPPRTVNCSQEHGRWISS*QNRFWL Trigger: CAACCAGAACCGATTCTGCCAACTGGAGATCCAGCG...TCCATGCTCTTGGCTGCAGTTAACTGTCCTGGGTGGATTCAGTGTCCAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR TCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGCGGCAGATGCAGGAGTaGCAAGGGCAGAAAGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: KHIEVQEGTWMFQAICCLRQMQE*QGQKVG Trigger: ACCAACTTTCTGCCCTTGTCACTCCTGCATCTGCCG...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGCACACTTACAAGGTCACCCATAATCTTTGGGACAAGCACATAGAAGGGGCAGCACCTTCCTaGCACCTGTATTCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QERHTYKVTHNLWDKHIEGAAPS*HLYSPG Trigger: CCCAGGAGAATACAGGTGCCAGGAAGGTGCTGCCCC...TTCTATGTGCTTGTCCCAAAGATTATGGGTGACCTTGTAAGTGTGCCTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGCACACTTACAAGGTCACCCATAATCTTTGGGACAAGCACATAGAAATGCCAGGCAGGGTCTaGACAGACACAGGCGACGCT | + |
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Preference number: 4 (lower is better) Translates to: QERHTYKVTHNLWDKHIEMPGRV*TDTGDA Trigger: AGCGTCGCCTGTGTCTGTCCAGACCCTGCCTGGCAT...TTCTATGTGCTTGTCCCAAAGATTATGGGTGACCTTGTAAGTGTGCCTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR TCA 90 bp | AAGCACATAGAAGTCCAAGAAGGGACCTGGATGTTTCAGGCAATCTGCTGCCTGCTGGGCATACACCATTaGGAGAATGCAGAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KHIEVQEGTWMFQAICCLLGIHH*ENAEEG Trigger: TCCTTCCTCTGCATTCTCTCAATGGTGTATGCCCAG...CAGGCAGCAGATTGCCTGAAACATCCAGGTCCCTTCTTGGACTTCTATGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | GCTTGCCCAGTACAGCTTAGCTTTAAAGGTCCTTTTGGTTGTCCTTTTCATACATGCCGGCTGCATCACTaGCTGGTCACACACCCACTC | + |
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Preference number: 4 (lower is better) Translates to: ACPVQLSFKGPFGCPFHTCRLHH*LVTHPL Trigger: GAGTGGGTGTGTGACCAGGCAGTGATGCAGCCGGCA...TGTATGAAAAGGACAACCAAAAGGACCTTTAAAGCTAAGCTGTACTGGGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR TCA 90 bp | CTTAAGAATAGTGTGATTCCATCTCTTCATGTTCCCAGAAAATTCTTCCCAGCCGAAGGCACTGTTCCATaGGCCGTGGCTCCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LKNSVIPSLHVPRKFFPAEGTVP*AVAPGC Trigger: GCATCCAGGAGCCACGGCTCATGGAACAGTGCCTTC...GGCTGGGAAGAATTTTCTGGGAACATGAAGAGATGGAATCACACTATTCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | TACAGCTTAGCTTTAAAGGTCCTTTTGGTTGTCCTTTTCATACAGGGAAGTTTTTGCCCAACCCACAGGTaGTTGAGCAGGGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YSLALKVLLVVLFIQGSFCPTHR*LSRGPR Trigger: CCTGGGGCCCCTGCTCAACCACCTGTGGGTTGGGCA...AAAACTTCCCTGTATGAAAAGGACAACCAAAAGGACCTTTAAAGCTAAGCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | AGGCACACTTACAAGGTCACCCATAATCTTTGGGACAAGCACATAGAAGTCCAAAGAATCGGTTCTGGTTaGATACTCGGGTGGCTATGC | + |
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Preference number: 4 (lower is better) Translates to: RHTYKVTHNLWDKHIEVQRIGSG*ILGWLC Trigger: GCATAGCCACCCGAGTATCCAACCAGAACCGATTCT...TTGGACTTCTATGTGCTTGTCCCAAAGATTATGGGTGACCTTGTAAGTGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR GCA 90 bp | TGTGTATTTTTACAAATACAAAGGTCAAGTTCCTGGACTTGGCAAACGCTCTTAATACTCGGGTGGCTATaGCCAACCCACAGGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: CVFLQIQRSSSWTWQTLLILGWL*PTHRWL Trigger: CAACCACCTGTGGGTTGGGCATAGCCACCCGAGTAT...TAAGAGCGTTTGCCAAGTCCAGGAACTTGACCTTTGTATTTGTAAAAATACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CCA 90 bp | TGTGTATTTTTACAAATACAAAGGTCAAGTTCCTGGACTTGGCAAACGCTCTTATGGCAGAATCGGTTCTaGTTGGATACTCGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CVFLQIQRSSSWTWQTLLWQNRF*LDTRVA Trigger: AGCCACCCGAGTATCCAACCAGAACCGATTCTGCCA...TAAGAGCGTTTGCCAAGTCCAGGAACTTGACCTTTGTATTTGTAAAAATACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| 3UTR CAA 72 bp | TGTATTTTTACAAATACAAAGGTCAAGTTCCTGGACTaGGCAAACGCTCTTAAGAATAGTGTGATTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: CIFTNTKVKFLD*ANALKNSVIPS Trigger: AGATGGAATCACACTATTCTTAAGAGCGTTTGCCAAGTCCAGGAACTTGACCTTTGTATTTGTAAAAATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | CAGCAGCCACAGCCATCCAGCACCAGGGGTACCCCCGGTGGGCACTaGGGTGGTGTCCAAGGACAGGCACAGGGTGCTGGGCACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQPQPSSTRGTPGGH*GGVQGQAQGAGHSW Trigger: CCAGCTGTGCCCAGCACCCTGTGCCTGTCCTTGGACACCACCCCAGTGCCCACCGGGGGTACCCCTGGTGCTGGATGGCTGTGGCTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | AGCTCCCGTCATCCTCTTCGAAGAGGCACACAGCACCACGGCCACTaGGGCCTGCCCCAGGCTGACAAACCAGGCCCTGGCTGGGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: SSRHPLRRGTQHHGH*GLPQADKPGPGWGR Trigger: GCGACCCCAGCCAGGGCCTGGTTTGTCAGCCTGGGGCAGGCCCCAGTGGCCGTGGTGCTGTGTGCCTCTTCGAAGAGGATGACGGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | CCACTCGGGGCAGCACCTTCCTGGCACCTGTATTCTCCTGGGGCGTaGGCAGTCCCAGCTGGGCAGCCGCACATCCTCACTGCACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: PLGAAPSWHLYSPGA*AVPAGQPHILTAQR Trigger: CCGCTGTGCAGTGAGGATGTGCGGCTGCCCAGCTGGGACTGCCCACGCCCCAGGAGAATACAGGTGCCAGGAAGGTGCTGCCCCGAGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS TCA 90 bp | CCCAGCTGGGCAGCCGCACATCCTCACTGCACAGCGGCAGGCAGGTaGAACCACCGTCATCACAGCGGCACAAAACCCTGCAATTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PSWAAAHPHCTAAGR*NHRHHSGTKPCNWV Trigger: AACCCAATTGCAGGGTTTTGTGCCGCTGTGATGACGGTGGTTTCACCTGCCTGCCGCTGTGCAGTGAGGATGTGCGGCTGCCCAGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS GCA 90 bp | TCTCCAGTTGGCAGAATCGGTTCTGGTTGGATACTCGGGTGGCTATaGCCAACCCACAGGTGGTTGAGCAGGGGCCCCAGGCTGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SPVGRIGSGWILGWL*PTHRWLSRGPRLCS Trigger: GGAGCACAGCCTGGGGCCCCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | GCTGGATCTCCAGTTGGCAGAATCGGTTCTGGTTGGATACTCGGGTaGCTATGCCCAACCCACAGGTGGTTGAGCAGGGGCCCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AGSPVGRIGSGWILG*LCPTHRWLSRGPRL Trigger: CAGCCTGGGGCCCCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | AGGCACTGTTCCATGAGCCGTGGCTCCTGGATGCCAGGCAGGGTCTaGACAGACACAGGCGACGCTGGATCTCCAGTTGGCAGAATCGGT | + |
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Preference number: 5 (lower is better) Translates to: RHCSMSRGSWMPGRV*TDTGDAGSPVGRIG Trigger: ACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCTGTCCAGACCCTGCCTGGCATCCAGGAGCCACGGCTCATGGAACAGTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS TCA 90 bp | AGGCTGTGCTCCAGTTTGGACAGGGGCCATCGGCAGATGCAGGAGTaGCAAGGGCAGAAAGTTGGTGTCCTTGGGCTGAGGAGGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RLCSSLDRGHRQMQE*QGQKVGVLGLRRAG Trigger: TCCAGCCCTCCTCAGCCCAAGGACACCAACTTTCTGCCCTTGTCACTCCTGCATCTGCCGATGGCCCCTGTCCAAACTGGAGCACAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | TGGCTCCTGGATGCCAGGCAGGGTCTGGACAGACACAGGCGACGCTaGATCTCCAGTTGGCAGAATCGGTTCTGGTTGGATACTCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: WLLDARQGLDRHRRR*ISSWQNRFWLDTRV Trigger: CACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCTGTCCAGACCCTGCCTGGCATCCAGGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | GACACAGGCGACGCTGGATCTCCAGTTGGCAGAATCGGTTCTGGTTaGATACTCGGGTGGCTATGCCCAACCCACAGGTGGTTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: DTGDAGSPVGRIGSG*ILGWLCPTHRWLSR Trigger: CCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CAA 90 bp | GTCACCTGCTTCCCCCACCTCAGACAGAGCAGGGATCGCTCAGAGGCTCTGGACACGCTGGATCTCCAGTaGGCAGAATCGGTTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VTCFPHLRQSRDRSEALDTLDLQ*AESVLV Trigger: AACCAGAACCGATTCTGCCAACTGGAGATCCAGCGT...GTCCAGAGCCTCTGAGCGATCCCTGCTCTGTCTGAGGTGGGGGAAGCAGGTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 90 bp | GACAGACACAGGCGACGCTGGATCTCCAGTTGGCAGAATCGGTTCTaGTTGGATACTCGGGTGGCTATGCCCAACCCACAGGTGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: DRHRRRWISSWQNRF*LDTRVAMPNPQVVE Trigger: CTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS TCA 90 bp | CCAAGGACAGGCACAGGGTGCTGGGCACAGCTGGGCATACACCATTaGGAGAATGCAGAGGAAGGAAATGGCCAGAAGATGGATCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRTGTGCWAQLGIHH*ENAEEGNGQKMDQW Trigger: CCACTGATCCATCTTCTGGCCATTTCCTTCCTCTGCATTCTCTCAATGGTGTATGCCCAGCTGTGCCCAGCACCCTGTGCCTGTCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS-3UTR CAA 90 bp | AGGCTCTGGACACTGAATCCACCCAGGACAGTTAACTGCAGCCAAGAGCATGGAGCTGGGCATACACCATaGAGAGAATGCAGAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RLWTLNPPRTVNCSQEHGAGHTP*RECRGR Trigger: CCTTCCTCTGCATTCTCTCAATGGTGTATGCCCAGC...TCCATGCTCTTGGCTGCAGTTAACTGTCCTGGGTGGATTCAGTGTCCAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | CAGCCATCCAGCACCAGGGGTACCCCCGGTGGGCACTaGGGTGGTGTCCAAGGACAGGCACAGGGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPSSTRGTPGGH*GGVQGQAQGAG Trigger: CCCAGCACCCTGTGCCTGTCCTTGGACACCACCCCAGTGCCCACCGGGGGTACCCCTGGTGCTGGATGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS GCA 72 bp | TGGTGTCCTTGGGCTGAGGAGGGCTGGATTGCCGGCTaGATCACTGCCTGGTCACACACCCACTCGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WCPWAEEGWIAG*ITAWSHTHSGQ Trigger: CTGCCCCGAGTGGGTGTGTGACCAGGCAGTGATGCAGCCGGCAATCCAGCCCTCCTCAGCCCAAGGACACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | GCAGCACCTTCCTGGCACCTGTATTCTCCTGGGGCGTaGGCAGTCCCAGCTGGGCAGCCGCACATCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: AAPSWHLYSPGA*AVPAGQPHILT Trigger: AGTGAGGATGTGCGGCTGCCCAGCTGGGACTGCCCACGCCCCAGGAGAATACAGGTGCCAGGAAGGTGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS TCA 72 bp | GCAGCCGCACATCCTCACTGCACAGCGGCAGGCAGGTaGAACCACCGTCATCACAGCGGCACAAAACCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AAAHPHCTAAGR*NHRHHSGTKPC Trigger: GCAGGGTTTTGTGCCGCTGTGATGACGGTGGTTTCACCTGCCTGCCGCTGTGCAGTGAGGATGTGCGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS GCA 72 bp | GGCAGAATCGGTTCTGGTTGGATACTCGGGTGGCTATaGCCAACCCACAGGTGGTTGAGCAGGGGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRIGSGWILGWL*PTHRWLSRGPR Trigger: CCTGGGGCCCCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | GGTTGGATACTCGGGTGGCTATGCCCAACCCACAGGTaGTTGAGCAGGGGCCCCAGGCTGTGCTCCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GWILGWLCPTHR*LSRGPRLCSSL Trigger: CAAACTGGAGCACAGCCTGGGGCCCCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | CCAGTTGGCAGAATCGGTTCTGGTTGGATACTCGGGTaGCTATGCCCAACCCACAGGTGGTTGAGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PVGRIGSGWILG*LCPTHRWLSRG Trigger: GCCCCTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CAA 72 bp | CAGAAAGTTGGTGTCCTTGGGCTGAGGAGGGCTGGATaGCCGGCTGCATCACTGCCTGGTCACACACCCACT | + |
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Preference number: 6 (lower is better) Translates to: QKVGVLGLRRAG*PAASLPGHTPT Trigger: AGTGGGTGTGTGACCAGGCAGTGATGCAGCCGGCAATCCAGCCCTCCTCAGCCCAAGGACACCAACTTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CAA 72 bp | GGGTCTGGACAGACACAGGCGACGCTGGATCTCCAGTaGGCAGAATCGGTTCTGGTTGGATACTCGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSGQTQATLDLQ*AESVLVGYSGG Trigger: GCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCTGTCCAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CAA 90 bp | AGACACAGGCGACGCTGGATCTCCAGTTGGCAGAATCGGTTCTGGTaGGATACTCGGGTGGCTATGCCCAACCCACAGGTGGTTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RHRRRWISSWQNRFW*DTRVAMPNPQVVEQ Trigger: CTGCTCAACCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | GACGCTGGATCTCCAGTTGGCAGAATCGGTTCTGGTTaGATACTCGGGTGGCTATGCCCAACCCACAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: DAGSPVGRIGSG*ILGWLCPTHRW Trigger: CCACCTGTGGGTTGGGCATAGCCACCCGAGTATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | GATGCCAGGCAGGGTCTGGACAGACACAGGCGACGCTaGATCTCCAGTTGGCAGAATCGGTTCTGGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: DARQGLDRHRRR*ISSWQNRFWLD Trigger: ATCCAACCAGAACCGATTCTGCCAACTGGAGATCCAGCGTCGCCTGTGTCTGTCCAGACCCTGCCTGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CCA 72 bp | GGTGTCCAAGGACAGGCACAGGGTGCTGGGCACAGCTaGGCATACACCATTGAGAGAATGCAGAGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GVQGQAQGAGHS*AYTIERMQRKE Trigger: TTCCTTCCTCTGCATTCTCTCAATGGTGTATGCCCAGCTGTGCCCAGCACCCTGTGCCTGTCCTTGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CAA 90 bp | AGGCAGGTGAAACCACCGTCATCACAGCGGCACAAAACCCTGCAATaGGGTTTAAAGGTCTCCCCATCCAGGTACCTGCGGCCATTCACC | + |
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Preference number: 6 (lower is better) Translates to: RQVKPPSSQRHKTLQ*GLKVSPSRYLRPFT Trigger: GGTGAATGGCCGCAGGTACCTGGATGGGGAGACCTTTAAACCCAATTGCAGGGTTTTGTGCCGCTGTGATGACGGTGGTTTCACCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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| CDS CAA 72 bp | AAACCACCGTCATCACAGCGGCACAAAACCCTGCAATaGGGTTTAAAGGTCTCCCCATCCAGGTACCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: KPPSSQRHKTLQ*GLKVSPSRYLR Trigger: CCGCAGGTACCTGGATGGGGAGACCTTTAAACCCAATTGCAGGGTTTTGTGCCGCTGTGATGACGGTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029188.8 |
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