Pregenerated sensors for CCM2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027474Ensembl transcript IDs: ENSMUST00000109800.2, ENSMUST00000127898.9, ENSMUST00000129377.8, ENSMUST00000238488.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGGGGATCCAGCGGGTTGGGGCCCGGGTGGCGTCGCTCCCAGCTaGCGCCGACGCCGCCACTCGCCTGCCGCCGCTCCCAGCTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SGDPAGWGPGGVAPS*RRRRHSPAAAPSCH Trigger: GTGGCAGCTGGGAGCGGCGGCAGGCGAGTGGCGGCGTCGGCGGCAGCTGGGAGCGACGCCACCCGGGCCCCAACCCGCTGGATCCCCAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | GGTTGCAGTAGGCGTCGGGGCTGTGGTTCTGGGGATCCAGCGGGTTaGGGCCCGGGTGGCGTCGCTCCCAGCTGCCGCCGACGCCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GCSRRRGCGSGDPAG*GPGGVAPSCRRRRH Trigger: GTGGCGGCGTCGGCGGCAGCTGGGAGCGACGCCACCCGGGCCCCAACCCGCTGGATCCCCAGAACCACAGCCCCGACGCCTACTGCAACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | GCCGCAGAGCTACAGGTAGTTGTCTTCAACCTGGTCGCCCCCGCTTaGGGAGACATCCTCATAGACGTCGTCGTCGTCAGGGGCCAGCGC | + |
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Preference number: 1 (lower is better) Translates to: AAELQVVVFNLVAPA*GDILIDVVVVRGQR Trigger: GCGCTGGCCCCTGACGACGACGACGTCTATGAGGATGTCTCCCCAAGCGGGGGCGACCAGGTTGAAGACAACTACCTGTAGCTCTGCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR TCA 90 bp | CATAGACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTaGTGTCGGCTAGCAGCTGGTGGAAGGTCTGCACCTCGGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HRRRRRQGPAPQCHE*CRLAAGGRSAPRAS Trigger: AGAGGCCCGAGGTGCAGACCTTCCACCAGCTGCTAGCCGACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGTCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR TCA 90 bp | GCGCACAGGATTCCTCAGCGGCATCCCTGTTTGCCACAGCCAGAATaGCCAGGTTGCAGTAGGCGTCGGGGCTGTGGTTCTGGGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: AHRIPQRHPCLPQPE*PGCSRRRGCGSGDP Trigger: TGGATCCCCAGAACCACAGCCCCGACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAAACAGGGATGCCGCTGAGGAATCCTGTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | AAACGTCCCGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATaGCCGCTTTGGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: KRPVRTTALTAAGEP*PLWCGSVVVAGPVY Trigger: GTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR GCA 90 bp | AATCCTGTAGCTGCTCGAAGGCCCAGCTGCTGTGGTCGATACTGCTaGAGTGGGAGCCGTGGAAAGACGGTGTGGATGCGCCACTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: NPVAARRPSCCGRYC*SGSRGKTVWMRHCS Trigger: GCTACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTTCGAGCAGCTACAGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | GTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGAT | + |
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Preference number: 1 (lower is better) Translates to: VRTTALTAAGEPWPL*CGSVVVAGPVYTLD Trigger: ATCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR GCA 90 bp | TGTAATCCTGTAGCTGCTCGAAGGCCCAGCTGCTGTGGTCGATACTaGTGCAGTGGGAGCCGTGGAAAGACGGTGTGGATGCGCCACTGT | + |
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Preference number: 1 (lower is better) Translates to: CNPVAARRPSCCGRY*CSGSRGKTVWMRHC Trigger: ACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTTCGAGCAGCTACAGGATTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | TACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: YDSSHCSWRAMAALV*ICSGSRPGLHTRCS Trigger: AGAGCATCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 90 bp | TGCTGTGGTCGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGTaGATGCGCCACTGTAGCACGCTTCAAATGTGTCCTGGGAGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: CCGRYCCSGSRGKTV*MRHCSTLQMCPGSH Trigger: ATGGCTCCCAGGACACATTTGAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR GCA 90 bp | GTGGTCGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGTGGATaGGCCACTGTAGCACGCTTCAAATGTGTCCTGGGAGCCATTGAA | + |
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Preference number: 1 (lower is better) Translates to: VVDTAAVGAVERRCG*ATVARFKCVLGAIE Trigger: TTCAATGGCTCCCAGGACACATTTGAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR TCA 90 bp | ACTGACTATCCCGCCCTCTGCAGGATCTTCTCGGTATTGCAGGACTaGAGCCCTAGGAACCCATTTGCAAGGGAACCCATTTGCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TDYPALCRIFSVLQD*SPRNPFAREPICKE Trigger: TTCCTTGCAAATGGGTTCCCTTGCAAATGGGTTCCTAGGGCTTCAGTCCTGCAATACCGAGAAGATCCTGCAGAGGGCGGGATAGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR CCA 90 bp | TGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATaGGAACCCAGGAGTCTAGGCATACTGGGGATGATGTCGTATGGG | + |
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Preference number: 1 (lower is better) Translates to: CKGTHLQGKKPRRYR*EPRSLGILGMMSYG Trigger: CCCATACGACATCATCCCCAGTATGCCTAGACTCCTGGGTTCCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR CAA 90 bp | CCGACGCCGCCACTCGCCTGCCGCCGCTCCCAGCTGCCACCCGGCTaGCCCGCACCTCCGCCCGCGTGCCGTCGCTCCCAGCTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: PTPPLACRRSQLPPG*PAPPPACRRSQLPL Trigger: CAGTGGCAGCTGGGAGCGACGGCACGCGGGCGGAGGTGCGGGCAAGCCGGGTGGCAGCTGGGAGCGGCGGCAGGCGAGTGGCGGCGTCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGTCTGCACCTCGGGCCTCTGGGCCGCCCCGTCGTAACTGCGCACAGCAGAGCGCCTCAATGTCATaGGTGATGTCGGCTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRSAPRASGPPRRNCAQQSASMS*VMSASS Trigger: GCTGCTAGCCGACATCACTCATGACATTGAGGCGCT...CTGCTGTGCGCAGTTACGACGGGGCGGCCCAGAGGCCCGAGGTGCAGACCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | CGGCCAAAGCTGTCAGTGAGGATTCCGCCCTCGCGGATACCCATACTCTCCAGGCGCGCCAGTCCAGGCTaGAGATGGTGTGGCGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: RPKLSVRIPPSRIPILSRRASPG*RWCGVA Trigger: AGCGACGCCACACCATCTGCAGCCTGGACTGGCGCG...CCTGGAGAGTATGGGTATCCGCGAGGGCGGAATCCTCACTGACAGCTTTGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCAGCTGCTGTGGTCGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGTCGGCTAGCAGCTGGTaGAAGGTCTGCACCTCGGGC | + |
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Preference number: 2 (lower is better) Translates to: RPSCCGRYCCSGSRGKTVSASSW*KVCTSG Trigger: GCCCGAGGTGCAGACCTTCCACCAGCTGCTAGCCGA...CACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CAA 90 bp | CGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTaGGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGA | + |
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Preference number: 2 (lower is better) Translates to: RPYDSSHCSWRAMAA*VWICSGSRPGLHTR Trigger: TCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAACGTCCCGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCCCCAGAAGGTACAGATaGGAACCCAGGAGTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: ANVPSVRQLSLQLESHGRPRRYR*EPRSLG Trigger: GCCTAGACTCCTGGGTTCCCATCTGTACCTTCTGGG...GCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTCTGCACCTCGGGCCTCTGGGCCGCCCCGTCGTAACTGCGCACAGCAGCAGGTTTGCAGAAAGTaGGGCGTGAATTGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GRSAPRASGPPRRNCAQQQVCRK*GVNWKS Trigger: AGATTTCCAATTCACGCCCCACTTTCTGCAAACCTG...CTGCTGTGCGCAGTTACGACGGGGCGGCCCAGAGGCCCGAGGTGCAGACCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCAGCTGCTGTGGTCGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGGGATCTTCTCGGTATTaGAGGACTGAAGCCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RPSCCGRYCCSGSRGKTVGSSRY*RTEALG Trigger: TCCTAGGGCTTCAGTCCTGCAATACCGAGAAGATCC...CACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR TCA 90 bp | CGCGGATACCCATACTCTCCAGGAAGCCCTCGAAGTAGCCGATGTCCTGATCTGAGCGCCTCAATGTCATaGGTGATGTCGGCTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RGYPYSPGSPRSSRCPDLSASMS*VMSASS Trigger: GCTGCTAGCCGACATCACTCATGACATTGAGGCGCT...CAGATCAGGACATCGGCTACTTCGAGGGCTTCCTGGAGAGTATGGGTATCCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTGGATCTGGTCCCCGTAGATaGTCTGGAAGACTTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VRTTALTAAGEPWPLWCGSGPRR*SGRLDR Trigger: TCTGTCAAGTCTTCCAGATCATCTACGGGGACCAGA...TCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTAGTCCAGGCTGCAGATaGTGTGGCGTCGCTCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRSPGCR*CGVARL Trigger: CAGCCGAGCGACGCCACACCATCTGCAGCCTGGACT...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CAA 90 bp | GTCTACACACTCGATGCTCTGGTCCCCGTAGATGATCTGGAAGACTaGACAGATGAGCGCACAGGATTCCTCAGCGGCATCCCTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VYTLDALVPVDDLED*TDERTGFLSGIPVC Trigger: GCAAACAGGGATGCCGCTGAGGAATCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCATCTACGGGGACCAGAGCATCGAGTGTGTAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCCCAGAAGGTACAGATaGGAACCCAGGAGTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: GWAGLQKVGRELEIFSVRPRRYR*EPRSLG Trigger: GCCTAGACTCCTGGGTTCCCATCTGTACCTTCTGGG...GCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCCCTCAATGTCATGAGTaGTGTCGGCTAGCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RFWKCFWFGVGQVCRKWGPQCHE*CRLAAG Trigger: ACCAGCTGCTAGCCGACATCACTCATGACATTGAGG...GCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGTTGCCACAGCCAGAATaGCCAGGTTGCAGTAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: PFAREPICKERSPEGTDGLPQPE*PGCSRR Trigger: ACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAA...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCAGCTGGTGGAAGGTCTaGACCTCGGGCCTCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFSWWKV*TSGLWA Trigger: GGCCCAGAGGCCCGAGGTGCAGACCTTCCACCAGCT...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTAAAAACAAACAAACAAGCTGGTGGAAGGTCTaGACCTCGGGCCTCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GNGNLVFPQIHSLKNKQTSWWKV*TSGLWA Trigger: GGCCCAGAGGCCCGAGGTGCAGACCTTCCACCAGCT...TGTTTGTTTGTTTTTAAGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTAAAAACAAATCGGGGCTGTGGTTCTaGGGATCCAGCGGGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RCGNGNLVFPQIHSLKNKSGLWF*GSSGLG Trigger: CCCCAACCCGCTGGATCCCCAGAACCACAGCCCCGA...TTTGTTTTTAAGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGAGCAATGCAAACTGCTaGATCTCAGGAGGACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PFAREPICKERSPEGTDGSNANC*ISGGPS Trigger: GCTGGGTCCTCCTGAGATCCAGCAGTTTGCATTGCT...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR TCA 90 bp | CGATTCTTTATCTTGAAGAACACTGACTATCCCGCCCTCTGCAGGATCTTCTCGCCTCAATGTCATGAGTaGTGTCGGCTAGCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RFFILKNTDYPALCRIFSPQCHE*CRLAAG Trigger: ACCAGCTGCTAGCCGACATCACTCATGACATTGAGG...CGAGAAGATCCTGCAGAGGGCGGGATAGTCAGTGTTCTTCAAGATAAAGAATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCGCAAGGGAACCCATTTaGAAGGAAAGAAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VGGAEIIVEMWKWEPGVPAREPI*KERSPE Trigger: TTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGC...GGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTTTCTGGTTTGGGGTTaGGCAGGTTTGCAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VGGAEIIVEMWKWEPGVPFLVWG*AGLQKV Trigger: CACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA...GGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGTTTCTGGTTTGGGGTTaGGCAGGTTTGCAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PFAREPICKERSPEGTDGFLVWG*AGLQKV Trigger: CACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTTTCTGGTTTGGGGTTaGGCAGGTTTGCAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKFLVWG*AGLQKV Trigger: CACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGGTGGAAATGGGAACCTaGTGTTCCCTCAAATCCATT | + |
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Preference number: 2 (lower is better) Translates to: PFAREPICKERSPEGTDGVEMGT*CSLKSI Trigger: AATGGATTTGAGGGAACACCAGGTTCCCATTTCCAC...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: IIVEMWKWEPGVPSNPFPEPWPL*CGSVVV Trigger: TACCACTACAGATCCACACCAAAGCGGCCATGGCTC...AGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR-3UTR GCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCGCAAGGGAACCCATTTaGAAGGAAAGAAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFAREPI*KERSPE Trigger: TTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGC...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCAGGTTTGCAGAAAGTaGGGCGTGAATTGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFQVCRK*GVNWKS Trigger: AGATTTCCAATTCACGCCCCACTTTCTGCAAACCTG...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTATTATCGTAGAGATGTaGAAATGGGAACCTGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IIVEMWKWEPGVPSNPFPIIVEM*KWEPGV Trigger: AACACCAGGTTCCCATTTCCACATCTCTACGATAAT...AGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| 3UTR GCA 72 bp | CACTCGCCTGCCGCCGCTCCCAGCTGCCACCCGGCTTaGCCGCACCTCCGCCCGCGTGCCGTCGCTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: HSPAAAPSCHPA*PHLRPRAVAPS Trigger: GCTGGGAGCGACGGCACGCGGGCGGAGGTGCGGGCAAGCCGGGTGGCAGCTGGGAGCGGCGGCAGGCGAGTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
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| 3UTR CCA 72 bp | AGGCGTCGGGGCTGTGGTTCTGGGGATCCAGCGGGTTaGGGCCCGGGTGGCGTCGCTCCCAGCTGCCGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRRGCGSGDPAG*GPGGVAPSCRR Trigger: TCGGCGGCAGCTGGGAGCGACGCCACCCGGGCCCCAACCCGCTGGATCCCCAGAACCACAGCCCCGACGCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR GCA 72 bp | CAGCTGCCACCCGGCTTGCCCGCACCTCCGCCCGCGTaGCGTCGCTCCCAGCTGCCACTGAACGTCTGTCGC | + |
|
Preference number: 3 (lower is better) Translates to: QLPPGLPAPPPA*RRSQLPLNVCR Trigger: GCGACAGACGTTCAGTGGCAGCTGGGAGCGACGGCACGCGGGCGGAGGTGCGGGCAAGCCGGGTGGCAGCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR GCA 72 bp | GCTGCTCGAAGGCCCAGCTGCTGTGGTCGATACTGCTaGAGTGGGAGCCGTGGAAAGACGGTGTGGATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: AARRPSCCGRYC*SGSRGKTVWMR Trigger: GCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTTCGAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR TCA 72 bp | CGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTaGTGTCGGCTAGCAGCTGGTGGAAGGTCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RRRQGPAPQCHE*CRLAAGGRSAP Trigger: AGGTGCAGACCTTCCACCAGCTGCTAGCCGACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| 3UTR TCA 72 bp | ACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATaGGTGATGTCGGCTAGCAGCTGGTGGAAGGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSSSSGASASMS*VMSASSWWKVC Trigger: GCAGACCTTCCACCAGCTGCTAGCCGACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| 3UTR GCA 72 bp | GTAGCTGCTCGAAGGCCCAGCTGCTGTGGTCGATACTaGTGCAGTGGGAGCCGTGGAAAGACGGTGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VAARRPSCCGRY*CSGSRGKTVWM Trigger: CATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTTCGAGCAGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | ACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TALTAAGEPWPL*CGSVVVAGPVY Trigger: GTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR GCA 72 bp | CATAGGCAAACGTCCCGTCCGTACGACAGCTCTCACTaGAGCTGGAGAGCCATGGCCGCTTTGGTGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: HRQTSRPYDSSH*SWRAMAALVWI Trigger: GATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTTGCCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | TCTCACTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGGCCCGGTCTACACACT | + |
|
Preference number: 3 (lower is better) Translates to: SHCSWRAMAALV*ICSGSRPGLHT Trigger: AGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR TCA 72 bp | ATTCCTCAGCGGCATCCCTGTTTGCCACAGCCAGAATaGCCAGGTTGCAGTAGGCGTCGGGGCTGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPQRHPCLPQPE*PGCSRRRGCGS Trigger: AGAACCACAGCCCCGACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAAACAGGGATGCCGCTGAGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR GCA 72 bp | GATGAGCGCACAGGATTCCTCAGCGGCATCCCTGTTTaGCACAGCCAGAATGACCAGGTTGCAGTAGGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: DERTGFLSGIPV*HSQNDQVAVGV Trigger: GACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAAACAGGGATGCCGCTGAGGAATCCTGTGCGCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | CTACAGGTAGTTGTCTTCAACCTGGTCGCCCCCGCTTaGGGAGACATCCTCATAGACGTCGTCGTCGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQVVVFNLVAPA*GDILIDVVVVR Trigger: CCTGACGACGACGACGTCTATGAGGATGTCTCCCCAAGCGGGGGCGACCAGGTTGAAGACAACTACCTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | CAAACGTCCCGTCCGTACGACAGCTCTCACTGCAGCTaGAGAGCCATGGCCGCTTTGGTGTGGATCTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTSRPYDSSHCS*RAMAALVWICS Trigger: ACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | CGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGTaGATGCGCCACTGTAGCACGCTTCAAATGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RYCCSGSRGKTV*MRHCSTLQMCP Trigger: AGGACACATTTGAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR TCA 72 bp | CCCGCCCTCTGCAGGATCTTCTCGGTATTGCAGGACTaGAGCCCTAGGAACCCATTTGCAAGGGAACCCATT | + |
|
Preference number: 3 (lower is better) Translates to: PALCRIFSVLQD*SPRNPFAREPI Trigger: AATGGGTTCCCTTGCAAATGGGTTCCTAGGGCTTCAGTCCTGCAATACCGAGAAGATCCTGCAGAGGGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR GCA 72 bp | CTGACTATCCCGCCCTCTGCAGGATCTTCTCGGTATTaGAGGACTGAAGCCCTAGGAACCCATTTGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTIPPSAGSSRY*RTEALGTHLQG Trigger: CCCTTGCAAATGGGTTCCTAGGGCTTCAGTCCTGCAATACCGAGAAGATCCTGCAGAGGGCGGGATAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR GCA 72 bp | GAACTTCCGTCGGTCCCCATAGAGTTTCTGCAGACCTaGACAGTAGTCCTGGATAGGCAGCCCCAGACGATA | + |
|
Preference number: 3 (lower is better) Translates to: ELPSVPIEFLQT*TVVLDRQPQTI Trigger: TATCGTCTGGGGCTGCCTATCCAGGACTACTGTGCAGGTCTGCAGAAACTCTATGGGGACCGACGGAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAAGTGTCCTGGGAGCCATaGAAGGAGCTGCAGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PMTTCEVGGAEIIVEMWKVSWEP*KELQQL Trigger: GAGCTGCTGCAGCTCCTTCAATGGCTCCCAGGACAC...TTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGATGATCTGGAAGACTaGACAGATGAGCGCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRDDLED*TDERTG Trigger: TCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCATC...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| 3UTR CCA 72 bp | ACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATaGGAACCCAGGAGTCTAGGCATACTGGGGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: THLQGKKPRRYR*EPRSLGILGMM Trigger: CATCATCCCCAGTATGCCTAGACTCCTGGGTTCCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCTGCAAGGGAACCCATTaGCAAGGAAAGAAGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: REVSRFWKCFWFGVGQVCCKGTH*QGKKPR Trigger: TCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCA...GCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTGGGGTTGGGCAGGTTaGCAGAAAGTGGGGCGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: IIVEMWKWEPGVPSNPFPWGWAG*QKVGRE Trigger: TTCACGCCCCACTTTCTGCAAACCTGCCCAACCCCA...AGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGCAAGGGAACCCATTaGCAAGGAAAGAAGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKCKGTH*QGKKPR Trigger: TCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCA...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR CCA 72 bp | TGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTaGAAATGGGAACCTGGTGTTCCCTCAAATCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: CEVGGAEIIVEM*KWEPGVPSNPF Trigger: GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGGAGAAACAGCATTTATaGAGCACCTACAGCATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKEKQHL*STYSML Trigger: TAGCATGCTGTAGGTGCTCAATAAATGCTGTTTCTC...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCTTCAGTTTCTTAGCCTGTAAAATTGAAGAGAGGTCTCTAGGTTCTGGAGTTTCTGGTTTGGGGTaGGGCAGGTTTGCAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLFSFLACKIEERSLGSGVSGLG*GRFAES Trigger: ACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAAC...TCCAGAACCTAGAGACCTCTCTTCAATTTTACAGGCTAAGAAACTGAAGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| 3UTR CAA 72 bp | CCACTCGCCTGCCGCCGCTCCCAGCTGCCACCCGGCTaGCCCGCACCTCCGCCCGCGTGCCGTCGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLACRRSQLPPG*PAPPPACRRSQ Trigger: CTGGGAGCGACGGCACGCGGGCGGAGGTGCGGGCAAGCCGGGTGGCAGCTGGGAGCGGCGGCAGGCGAGTGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR CCA 90 bp | TGCCGCCGACGCCGCCACTCGCCTGCCGCCGCTCCCAGCTGCCACCCGGCTTGCACTCCTTCAGCTGCCTaGCAGTGTCCAGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRRRRHSPAAAPSCHPACTPSAA*QCPEAA Trigger: TGCAGCTTCTGGACACTGCCAGGCAGCTGAAGGAGT...GCAAGCCGGGTGGCAGCTGGGAGCGGCGGCAGGCGAGTGGCGGCGTCGGCGGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTCTGGGGATCCAGCGGGTTGGGGCCCGGGTGGCGTCGCTCCCAGCTGCCGGACAGGCTCAGGATaGTGTCCTGCTCTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSGDPAGWGPGGVAPSCRTGSG*CPALAW Trigger: CCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCG...GCAGCTGGGAGCGACGCCACCCGGGCCCCAACCCGCTGGATCCCCAGAACCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTCTGCACCTCGGGCCTCTGGGCCGCCCCGTCGTAACTGCGCACAGCAGTCGGGGCTGTGGTTCTaGGGATCCAGCGGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSAPRASGPPRRNCAQQSGLWF*GSSGLG Trigger: CCCCAACCCGCTGGATCCCCAGAACCACAGCCCCGA...CTGCTGTGCGCAGTTACGACGGGGCGGCCCAGAGGCCCGAGGTGCAGACCTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTCTGCACCTCGGGCCTCTGGGCCGCCCCGTCGTAACTGCGCACAGCAGAGGCTGCAGATGGTGTaGCGTCGCTCGGCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSAPRASGPPRRNCAQQRLQMV*RRSAVP Trigger: AGGCACAGCCGAGCGACGCCACACCATCTGCAGCCT...CTGCTGTGCGCAGTTACGACGGGGCGGCCCAGAGGCCCGAGGTGCAGACCTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGAGGATTCCGCCCTCGCGGATACCCATACTCTCCAGGAAGCCCTCGAACATTGTCGCGCCAGGTaGGCAGCAGGCAGCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEDSALADTHTLQEALEHCRAR*AAGSVR Trigger: CCGCACGCTGCCTGCTGCTCACCTGGCGCGACAATG...TTCGAGGGCTTCCTGGAGAGTATGGGTATCCGCGAGGGCGGAATCCTCACTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | GCCGCAGAGCTACAGGTAGTTGTCTTCAACCTGGTCGCCCCCGCTTGGGGAGACTCGGGATGCGCAGGATaGGCTCCTCATTGTCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAELQVVVFNLVAPAWGDSGCAG*APHCRA Trigger: GGCGCGACAATGAGGAGCTCATCCTGCGCATCCCGA...GTCTCCCCAAGCGGGGGCGACCAGGTTGAAGACAACTACCTGTAGCTCTGCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCAGAGCTACAGGTAGTTGTCTTCAACCTGGTCGCCCCCGCTTGGGGAGACAAGGCCCAGCTGCTGTaGTCGATACTGCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAELQVVVFNLVAPAWGDKAQLL*SILLQW Trigger: CCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTT...GTCTCCCCAAGCGGGGGCGACCAGGTTGAAGACAACTACCTGTAGCTCTGCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
||
| 3UTR CAA 72 bp | GACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTaGGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DSSHCSWRAMAA*VWICSGSRPGL Trigger: TAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | CATCATAGGCAAACGTCCCGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCGTCACCCAGGTGAGGTaGCCCAGGAACTTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHRQTSRPYDSSHCSWRAVTQVR*PRNLTS Trigger: AGAGGTCAAGTTCCTGGGTCACCTCACCTGGGTGAC...GGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTTGCCTATGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR GCA 90 bp | TCCCGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTTAAGCACTAGCAGATaGAGAGCGTCGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPYDSSHCSWRAMAALVLSTSR*RASSCR Trigger: CCTGCAGGACGACGCTCTGCATCTGCTAGTGCTTAA...CACCAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | CATCATAGGCAAACGTCCCGTCCGTACGACAGCTCTCACTGCAGCTGGAGAGCCGGATGTGGGGGTCGATaGGGTAGTCAGGGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHRQTSRPYDSSHCSWRAGCGGR*GSQGDK Trigger: TTTATCCCCCTGACTACCTCATCGACCCCCACATCC...GGCTCTCCAGCTGCAGTGAGAGCTGTCGTACGGACGGGACGTTTGCCTATGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | CTCATAGACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTGATGTCGTCACCCAGGTGAGGTaGCCCAGGAACTTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIDVVVVRGQRLNVMSDVVTQVR*PRNLTS Trigger: AGAGGTCAAGTTCCTGGGTCACCTCACCTGGGTGAC...GACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGTCTATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCCATTGTCGCGCCAGGTaGGCAGCAGGCAGCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGAEIIVEMWKWEPGVPHCRAR*AAGSVR Trigger: CCGCACGCTGCCTGCTGCTCACCTGGCGCGACAATG...GGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGCGCGCCAGTCCAGGCTaGAGATGGTGTGGCGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGLQKVGRELEIFSVRQRASPG*RWCGVA Trigger: AGCGACGCCACACCATCTGCAGCCTGGACTGGCGCG...CTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTGATGTCGGCGAAAGACGGTGTGGATaGGCCACTGTAGCACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDVVVVRGQRLNVMSDVGERRCG*ATVARF Trigger: GAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTC...GCCGACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
||
| CDS-3UTR CCA 90 bp | CTCATAGACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTGATGTCGCCGATGTCCTGATCTaGGATGAAGGGCCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIDVVVVRGQRLNVMSDVADVLI*DEGPHS Trigger: GGAATGCGGCCCTTCATCCCAGATCAGGACATCGGC...GACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGTCTATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
||
| 3UTR CAA 72 bp | GCTACAGGTAGTTGTCTTCAACCTGGTCGCCCCCGCTaGGGGAGACATCCTCATAGACGTCGTCGTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATGSCLQPGRPR*GRHPHRRRRRQ Trigger: CTGACGACGACGACGTCTATGAGGATGTCTCCCCAAGCGGGGGCGACCAGGTTGAAGACAACTACCTGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGCATTGTCGCGCCAGGTaGGCAGCAGGCAGCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKHCRAR*AAGSVR Trigger: CCGCACGCTGCCTGCTGCTCACCTGGCGCGACAATG...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCGGCCAAAGCTGTCAGTaGGGATTCCGCCCTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWAGLQKVGRELEIFSVRGQSCQ*GFRPRG Trigger: TCCGCGAGGGCGGAATCCTCACTGACAGCTTTGGCC...GCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGTAGGTGGAGCTGGTGGAAGGTCTaGACCTCGGGCCTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCRKWGVNWKSFLSASRWSWWKV*TSGLWA Trigger: GGCCCAGAGGCCCGAGGTGCAGACCTTCCACCAGCT...CCACCTACTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCGGCCAAAGCTGTCAGTaGGGATTCCGCCCTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLVWGWAGLQKVGRELEIGQSCQ*GFRPRG Trigger: TCCGCGAGGGCGGAATCCTCACTGACAGCTTTGGCC...GATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGTAGGTGGCGGACAGGCTCAGGATaGTGTCCTGCTCTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCRKWGVNWKSFLSASRWRTGSG*CPALAW Trigger: CCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCG...CCACCTACTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGCGGACAGGCTCAGGATaGTGTCCTGCTCTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPMTTCEVGGAEIIVEMWRTGSG*CPALAW Trigger: CCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCG...CCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | CCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAACGCGCCAGTCCAGGCTaGAGATGGTGTGGCGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PMTTCEVGGAEIIVEMWKRASPG*RWCGVA Trigger: AGCGACGCCACACCATCTGCAGCCTGGACTGGCGCG...TTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGATCGGGGCTGTGGTTCTaGGGATCCAGCGGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQGNPFARKEAQKVQMGSGLWF*GSSGLG Trigger: CCCCAACCCGCTGGATCCCCAGAACCACAGCCCCGA...TCCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTCTGCAGTGGGAGCCGTaGAAAGACGGTGTGGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRLQWEP*KDGVDA Trigger: CGCATCCACACCGTCTTTCCACGGCTCCCACTGCAG...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCATCGGCTAGCAGCTGGTaGAAGGTCTGCACCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERSLGSGNVSGLGLGRFASASSW*KVCTSG Trigger: GCCCGAGGTGCAGACCTTCCACCAGCTGCTAGCCGA...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCGGCAACTCCTTCAGCTaGCTGGCAGTGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWAGLQKVGRELEIFSVRGNSFS*LAVSRS Trigger: GCTTCTGGACACTGCCAGGCAGCTGAAGGAGTTGCC...GCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTTACGACAGCTCTCACTaGAGCTGGAGAGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRYDSSH*SWRAMA Trigger: GGCCATGGCTCTCCAGCTGCAGTGAGAGCTGTCGTA...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGCTTCTGAAGGCAGCCTaGCGTGCAGCCTTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPMTTCEVGGAEIIVEMWLLKAA*RAAFGN Trigger: GTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAG...CCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGCTTCTGAAGGCAGCCTaGCGTGCAGCCTTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFAREPICKERSPEGTDGLLKAA*RAAFGN Trigger: GTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAG...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGGGAGCTCGTCTCGGCTaGAGGGGTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPMTTCEVGGAEIIVEMWGARLG*RGSVRK Trigger: CTTCCTCACTGAACCCCTCCAGCCGAGACGAGCTCC...CCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGAGGCTGCAGATGGTGTaGCGTCGCTCGGCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MTTCEVGGAEIIVEMWKWRLQMV*RRSAVP Trigger: AGGCACAGCCGAGCGACGCCACACCATCTGCAGCCT...CCATTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGAGTCCAGGCTGCAGATaGTGTGGCGTCGCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKSPGCR*CGVARL Trigger: CAGCCGAGCGACGCCACACCATCTGCAGCCTGGACT...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | CCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAAAGTCCAGGCTGCAGATaGTGTGGCGTCGCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PMTTCEVGGAEIIVEMWKSPGCR*CGVARL Trigger: CAGCCGAGCGACGCCACACCATCTGCAGCCTGGACT...TTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGGATGTGGGGGTCGATaGGGTAGTCAGGGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFWKCFWFGVGQVCRKWGGCGGR*GSQGDK Trigger: TTTATCCCCCTGACTACCTCATCGACCCCCACATCC...GCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCATGTCCTGGGAGCCATTaGAGGAGCTGCAGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERSLGSGNVSGLGLGRFACPGSH*RSCSSS Trigger: TGAGCTGCTGCAGCTCCTTCAATGGCTCCCAGGACA...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | CCCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGAGCTCATGCTGCGCTTaGTGCGGCCAAAGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PICKGTHLQGKKPRRYRWSSCCA*CGQSCQ Trigger: CTGACAGCTTTGGCCGCATCAAGCGCAGCATGAGCT...CCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCGGCAACTCCTTCAGCTaGCTGGCAGTGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: REVSRFWKCFWFGVGQVCGNSFS*LAVSRS Trigger: GCTTCTGGACACTGCCAGGCAGCTGAAGGAGTTGCC...GCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGTGCTGTGGTCGATACTaGTGCAGTGGGAGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFAREPICKERSPEGTDGCCGRY*CSGSRG Trigger: TCCACGGCTCCCACTGCAGCAGTATCGACCACAGCA...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCATGCTGTGGTCGATACTaGTGCAGTGGGAGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSLGSGNVSGLGLGRFACCGRY*CSGSRG Trigger: TCCACGGCTCCCACTGCAGCAGTATCGACCACAGCA...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCTGTCCTGCTCTGGCGTaGTCTTCAGAGGCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFWKCFWFGVGQVCRKWGCPALA*SSEATP Trigger: AGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACA...GCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRMAALV*ICSGSR Trigger: CCGGCTACCACTACAGATCCACACCAAAGCGGCCAT...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGTATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVCRKWGVNWKSFLSASMAALV*ICSGSR Trigger: CCGGCTACCACTACAGATCCACACCAAAGCGGCCAT...ACTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGTCGATACTGCTGCAGTaGGAGCCGTGGAAAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGLQKVGRELEIFSVRQSILLQ*EPWKDG Trigger: ACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGA...CTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | GTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCGCCGATGTCCTGATCTaGGATGAAGGGCCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGAEIIVEMWKWEPGVPADVLI*DEGPHS Trigger: GGAATGCGGCCCTTCATCCCAGATCAGGACATCGGC...GGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | AAAATTGAAGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCTCGGGATGCGCAGGATaGGCTCCTCATTGTCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIEERSLGSGNVSGLGLGSGCAG*APHCRA Trigger: GGCGCGACAATGAGGAGCTCATCCTGCGCATCCCGA...GCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCTTCAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | AGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCTTGCCACAGCCAGAATaGCCAGGTTGCAGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: REVSRFWKCFWFGVGQVCLPQPE*PGCSRR Trigger: ACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAA...GCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTTTTCTGTCCGCCAGCCTCAATGTCATGAGTaGTGTCGGCTAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGLQKVGRELEIFSVRQPQCHE*CRLAAG Trigger: ACCAGCTGCTAGCCGACATCACTCATGACATTGAGG...CTGGCGGACAGAAAAGATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCACTCAGGATGCTGTCCTaGTCTGGCGTGGTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSLGSGNVSGLGLGRFALRMLS*SGVVFR Trigger: TCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAG...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | GGAACCCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGCTCAGGATGCTGTCCTaGTCTGGCGTGGTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTHLQGNPFARKEAQKVQLRMLS*SGVVFR Trigger: TCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAG...CTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGGGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGAAAGACGGTGTGGATaGGCCACTGTAGCACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PICKGTHLQGKKPRRYRWERRCG*ATVARF Trigger: GAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTC...CCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTGTCCTGCTCTGGCGTaGTCTTCAGAGGCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVWGWAGLQKVGRELEICPALA*SSEATP Trigger: AGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACA...GATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | CCCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGTGTCCTGCTCTGGCGTaGTCTTCAGAGGCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PICKGTHLQGKKPRRYRWCPALA*SSEATP Trigger: AGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACA...CCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGAAGGCCCAGCTGCTGTaGTCGATACTGCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRFWKCFWFGVGQVCRKKAQLL*SILLQW Trigger: CCACTGCAGCAGTATCGACCACAGCAGCTGGGCCTT...CTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGAGGATGTGGGGGTCGATaGGGTAGTCAGGGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLQGNPFARKEAQKVQMGGCGGR*GSQGDK Trigger: TTTATCCCCCTGACTACCTCATCGACCCCCACATCC...TCCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCTCGGGATGCGCAGGATaGGCTCCTCATTGTCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFSGCAG*APHCRA Trigger: GGCGCGACAATGAGGAGCTCATCCTGCGCATCCCGA...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | ATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGTTGCCACAGCCAGAATaGCCAGGTTGCAGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MTTCEVGGAEIIVEMWKWLPQPE*PGCSRR Trigger: ACGCCTACTGCAACCTGGTCATTCTGGCTGTGGCAA...CCATTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFAREPICKERSPEGTDGEPWPL*CGSVVV Trigger: TACCACTACAGATCCACACCAAAGCGGCCATGGCTC...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ERSLGSGNVSGLGLGRFAEPWPL*CGSVVV Trigger: TACCACTACAGATCCACACCAAAGCGGCCATGGCTC...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGACCACCTGTGAGGTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATCGATACTGCTGCAGTaGGAGCCGTGGAAAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PMTTCEVGGAEIIVEMWKSILLQ*EPWKDG Trigger: ACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGA...TTTCCACATCTCTACGATAATTTCAGCTCCACCCACCTCACAGGTGGTCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTATGATCTGGAAGACTTaGCAGATGAGCGCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLEMFLVWGWAGLQKVGRMIWKT*QMSAQD Trigger: ATCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCAT...ACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAAAGTGGGGCGTGAATTGGAAATCTCTGGTCCCCGTAGATaGTCTGGAAGACTTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLVWGWAGLQKVGRELEISGPRR*SGRLDR Trigger: TCTGTCAAGTCTTCCAGATCATCTACGGGGACCAGA...GATTTCCAATTCACGCCCCACTTTCTGCAAACCTGCCCAACCCCAAACCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | AAAATTGAAGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCGGCAACTCCTTCAGCTaGCTGGCAGTGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIEERSLGSGNVSGLGLGGNSFS*LAVSRS Trigger: GCTTCTGGACACTGCCAGGCAGCTGAAGGAGTTGCC...GCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCTTCAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | CGATTCTTTATCTTGAAGAACACTGACTATCCCGCCCTCTGCAGGATCTTCTCGTTAAGCACTAGCAGATaGAGAGCGTCGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFFILKNTDYPALCRIFSLSTSR*RASSCR Trigger: CCTGCAGGACGACGCTCTGCATCTGCTAGTGCTTAA...CGAGAAGATCCTGCAGAGGGCGGGATAGTCAGTGTTCTTCAAGATAAAGAATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | ATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTGAGCCATTGTGCAGCTaGAGAGCCATGGCCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IIVEMWKWEPGVPSNPFPEPLCS*RAMAAL Trigger: CAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTC...AGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS-3UTR CCA 90 bp | AAAATTGAAGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGCTCTCACTGCAGCTaGAGAGCCATGGCCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KIEERSLGSGNVSGLGLGSSHCS*RAMAAL Trigger: CAAAGCGGCCATGGCTCTCCAGCTGCAGTGAGAGCT...GCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCTTCAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | CCATTTGCAAGGGAACCCATTTGCAAGGAAAGAAGCCCAGAAGGTACAGATGGGATGATCTGGAAGACTTaGCAGATGAGCGCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFAREPICKERSPEGTDGMIWKT*QMSAQD Trigger: ATCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCAT...CCCATCTGTACCTTCTGGGCTTCTTTCCTTGCAAATGGGTTCCCTTGCAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTTCAGTTTCTTAGCCTGTAAAATTGAAGAGAGGTCTCTAGGTTCTGGACTTCTGAAGGCAGCCTaGCGTGCAGCCTTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFSFLACKIEERSLGSGLLKAA*RAAFGN Trigger: GTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAG...TCCAGAACCTAGAGACCTCTCTTCAATTTTACAGGCTAAGAAACTGAAGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTTCAGTTTCTTAGCCTGTAAAATTGAAGAGAGGTCTCTAGGTTCTGGAGGAGCTCGTCTCGGCTaGAGGGGTTCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFSFLACKIEERSLGSGGARLG*RGSVRK Trigger: CTTCCTCACTGAACCCCTCCAGCCGAGACGAGCTCC...TCCAGAACCTAGAGACCTCTCTTCAATTTTACAGGCTAAGAAACTGAAGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AAAATTGAAGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCACTCCTTCAGCTGCCTaGCAGTGTCCAGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KIEERSLGSGNVSGLGLGTPSAA*QCPEAA Trigger: TGCAGCTTCTGGACACTGCCAGGCAGCTGAAGGAGT...GCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCTTCAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCAGCGCCTCAATGTCATaGGTGATGTCGGCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFSASMS*VMSASS Trigger: GCTGCTAGCCGACATCACTCATGACATTGAGGCGCT...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
||
| CDS-3UTR CCA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCACTCCTTCAGCTGCCTaGCAGTGTCCAGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFTPSAA*QCPEAA Trigger: TGCAGCTTCTGGACACTGCCAGGCAGCTGAAGGAGT...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AAAATTGAAGAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGCAATGCAAACTGCTaGATCTCAGGAGGACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIEERSLGSGNVSGLGLGSNANC*ISGGPS Trigger: GCTGGGTCCTCCTGAGATCCAGCAGTTTGCATTGCT...GCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTCTTCAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTAAAAACAAACAAACATTAAGCACTAGCAGATaGAGAGCGTCGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNGNLVFPQIHSLKNKQTLSTSR*RASSCR Trigger: CCTGCAGGACGACGCTCTGCATCTGCTAGTGCTTAA...TGTTTGTTTGTTTTTAAGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTTCAGTTTCTTAGCCTGTAAAATTGAAGAGAGGTCTCTAGGTTCTGGAAGCAATGCAAACTGCTaGATCTCAGGAGGACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFSFLACKIEERSLGSGSNANC*ISGGPS Trigger: GCTGGGTCCTCCTGAGATCCAGCAGTTTGCATTGCT...TCCAGAACCTAGAGACCTCTCTTCAATTTTACAGGCTAAGAAACTGAAGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR TCA 90 bp | AGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTAAAAACAAATCTGGTCCCCGTAGATaGTCTGGAAGACTTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCGNGNLVFPQIHSLKNKSGPRR*SGRLDR Trigger: TCTGTCAAGTCTTCCAGATCATCTACGGGGACCAGA...TTTGTTTTTAAGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS CCA 90 bp | GCGCCCCCGCCCCACGCCACGCGCCAGTCCAGGCTGCAGATGGTGTaGCGTCGCTCGGCTGTGCCTACCCGTCGTTTCTCGGGCGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APPPHATRQSRLQMV*RRSAVPTRRFSGAA Trigger: CGCCGCGCCCGAGAAACGACGGGTAGGCACAGCCGAGCGACGCCACACCATCTGCAGCCTGGACTGGCGCGTGGCGTGGGGCGGGGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS GCA 90 bp | GTGCAGGGGCCTGCGACTGACACTGCTTCTGAAGGCAGCCTGGCGTaGAGCCTTCGGGAACACCAGTCTTCGGATGGGGGACACAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQGPATDTASEGSLA*SLREHQSSDGGHKA Trigger: GGCTTTGTGTCCCCCATCCGAAGACTGGTGTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAGCAGTGTCAGTCGCAGGCCCCTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS GCA 90 bp | CAGGTGAGCAGCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTaGTCTGGCGTGGTCTTCAGAGGCAACTCCTTCAGCTGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVSSRQRADRLRMLS*SGVVFRGNSFSCLA Trigger: TGCCAGGCAGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGCTGCTCACCTG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS GCA 90 bp | CAGGTGAGCAGCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTaGTCTGGCGTGGTCTTCAGAGGCAACTCCTTCAGCCTGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSSRQRADRLRMLS*SGVVFRGNSFSLAV Trigger: CACTGCCAGGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGCTGCTCACCTG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129377.8 |
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| CDS CCA 90 bp | GAGCAGCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTGCTCTaGCGTGGTCTTCAGAGGCAACTCCTTCAGCTGCCTGGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EQQAACGQAQDAVLL*RGLQRQLLQLPGSV Trigger: GACACTGCCAGGCAGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGCTGCTC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS CCA 90 bp | GAGCAGCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTGCTCTaGCGTGGTCTTCAGAGGCAACTCCTTCAGCCTGGCAGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EQQAACGQAQDAVLL*RGLQRQLLQPGSVQ Trigger: CTGGACACTGCCAGGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGCTGCTC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129377.8 |
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| CDS CCA 90 bp | GCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTGCTCTGGCGTaGTCTTCAGAGGCAACTCCTTCAGCCTGGCAGTGTCCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSVRTGSGCCPALA*SSEATPSAWQCPEA Trigger: AGCTTCTGGACACTGCCAGGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129377.8 |
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| CDS CCA 90 bp | ATAGAGTGCAGGGGCCTGCGACTGACACTGCTTCTGAAGGCAGCCTaGCGTGCAGCCTTCGGGAACACCAGTCTTCGGATGGGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: IECRGLRLTLLLKAA*RAAFGNTSLRMGDT Trigger: TGTGTCCCCCATCCGAAGACTGGTGTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAGCAGTGTCAGTCGCAGGCCCCTGCACTCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS CCA 90 bp | TCCTGGGAGCCATTGTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWEPLCSWRAMAALV*ICSGSRPGLHTRCS Trigger: AGAGCATCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CCA 90 bp | ATGTGTCCTGGGAGCCATTGTGCAGCTGGAGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MCPGSHCAAGEPWPL*CGSVVVAGPVYTLD Trigger: ATCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCCAGGACACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS-3UTR CAA 90 bp | CTCATAGACGTCGTCGTCGTCAGGGGCCAGCGCCTCAATGTCATGAGTGATGTCAGGATGAGCTCCTCATaGTCGCGCCAGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIDVVVVRGQRLNVMSDVRMSSS*SRQVSS Trigger: GCTGCTCACCTGGCGCGACAATGAGGAGCTCATCCT...GACATCACTCATGACATTGAGGCGCTGGCCCCTGACGACGACGACGTCTATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 |
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| CDS GCA 90 bp | GTGGTCGATACTGCTGCAGTGGGAGCCGTGGAAAGACGGTGTGGATaGGCCACTGTAGCACGCTTCAAATGTGTCCTGGGAGCCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVDTAAVGAVERRCG*ATVARFKCVLGAIV Trigger: CACAATGGCTCCCAGGACACATTTGAAGCGTGCTACAGTGGCGCATCCACACCGTCTTTCCACGGCTCCCACTGCAGCAGTATCGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGAGCTGAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCAGGATGAGCTCCTCATaGTCGCGCCAGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGGAEIIVEMWKWEPGVPRMSSS*SRQVSS Trigger: GCTGCTCACCTGGCGCGACAATGAGGAGCTCATCCT...GGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTCAGCTCCACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGTCTCTAGGTTCTGGAAATGTTTCTGGTTTGGGGTTGGGCAGGTTTGCAGAGCTCATGCTGCGCTaGATGCGGCCAAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERSLGSGNVSGLGLGRFAELMLR*MRPKLS Trigger: TGACAGCTTTGGCCGCATCAAGCGCAGCATGAGCTC...TGCAAACCTGCCCAACCCCAAACCAGAAACATTTCCAGAACCTAGAGACCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
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| CDS-3UTR CAA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCAGGATGAGCTCCTCATaGTCGCGCCAGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFRMSSS*SRQVSS Trigger: GCTGCTCACCTGGCGCGACAATGAGGAGCTCATCCT...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS-3UTR CAA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCGTGTCCTGGGAGCCATaGAAGGAGCTGCAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFVSWEP*KELQQL Trigger: GAGCTGCTGCAGCTCCTTCAATGGCTCCCAGGACAC...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238488.2 |
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| CDS-3UTR CAA 90 bp | GAAATTATCGTAGAGATGTGGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCGATGATCTGGAAGACTaGACAGATGAGCGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EIIVEMWKWEPGVPSNPFDDLED*TDERTG Trigger: TCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCATC...GAATGGATTTGAGGGAACACCAGGTTCCCATTTCCACATCTCTACGATAATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS-3UTR CAA 90 bp | GGAAATGGGAACCTGGTGTTCCCTCAAATCCATTCCCTTAAAAACAAACAAACAGATGATCTGGAAGACTaGACAGATGAGCGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GNGNLVFPQIHSLKNKQTDDLED*TDERTG Trigger: TCCTGTGCGCTCATCTGTCAAGTCTTCCAGATCATC...TGTTTGTTTGTTTTTAAGGGAATGGATTTGAGGGAACACCAGGTTCCCATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS GCA 72 bp | CCGGAGGGCCGGGATCGCGACCCGAACCTCCCGGGCTaGCATCCATGCCCGCGGGCACAGGGTCCACCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PEGRDRDPNLPG*HPCPRAQGPPP Trigger: TGGGGGTGGACCCTGTGCCCGCGGGCATGGATGGCAGCCCGGGAGGTTCGGGTCGCGATCCCGGCCCTCCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS GCA 72 bp | CCGCGCCCCCGCCCCACGCCACGCGCCAGTCCAGGCTaGAGATGGTGTGGCGTCGCTCGGCTGTGCCTACCC | + |
|
Preference number: 6 (lower is better) Translates to: PRPRPTPRASPG*RWCGVARLCLP Trigger: GGGTAGGCACAGCCGAGCGACGCCACACCATCTGCAGCCTGGACTGGCGCGTGGCGTGGGGCGGGGGCGCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | CCCCGCCCCACGCCACGCGCCAGTCCAGGCTGCAGATaGTGTGGCGTCGCTCGGCTGTGCCTACCCGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PRPTPRASPGCR*CGVARLCLPVV Trigger: AACGACGGGTAGGCACAGCCGAGCGACGCCACACCATCTGCAGCCTGGACTGGCGCGTGGCGTGGGGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | CCCCACGCCACGCGCCAGTCCAGGCTGCAGATGGTGTaGCGTCGCTCGGCTGTGCCTACCCGTCGTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PHATRQSRLQMV*RRSAVPTRRFS Trigger: CGAGAAACGACGGGTAGGCACAGCCGAGCGACGCCACACCATCTGCAGCCTGGACTGGCGCGTGGCGTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109800.2 ENSMUST00000238488.2 |
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| CDS CAA 90 bp | GCAGCAGCAATCTCGTGCGTCGGGATGCGCAGGATGAGCTCCTCATaGTCGCGCCAGGTGAGCAGCAGGCAGCGTGCGGACAGGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAISCVGMRRMSSS*SRQVSSRQRADRLR Trigger: CCTGAGCCTGTCCGCACGCTGCCTGCTGCTCACCTGGCGCGACAATGAGGAGCTCATCCTGCGCATCCCGACGCACGAGATTGCTGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS CAA 72 bp | ATCTCGTGCGTCGGGATGCGCAGGATGAGCTCCTCATaGTCGCGCCAGGTGAGCAGCAGGCAGCGTGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISCVGMRRMSSS*SRQVSSRQRAD Trigger: GTCCGCACGCTGCCTGCTGCTCACCTGGCGCGACAATGAGGAGCTCATCCTGCGCATCCCGACGCACGAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | GCAGCGTGCGGACAGGCTCAGGATGCTGTCCTGCTCTaGCGTGGTCTTCAGAGGCAACTCCTTCAGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AACGQAQDAVLL*RGLQRQLLQPG Trigger: GCCAGGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129377.8 |
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| CDS GCA 72 bp | CCTGCGACTGACACTGCTTCTGAAGGCAGCCTGGCGTaGAGCCTTCGGGAACACCAGTCTTCGGATGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PATDTASEGSLA*SLREHQSSDGG Trigger: TCCCCCATCCGAAGACTGGTGTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAGCAGTGTCAGTCGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS GCA 72 bp | AGCAGGCAGCGTGCGGACAGGCTCAGGATGCTGTCCTaGTCTGGCGTGGTCTTCAGAGGCAACTCCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRQRADRLRMLS*SGVVFRGNSFS Trigger: GCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGCCTGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | AGGGGCCTGCGACTGACACTGCTTCTGAAGGCAGCCTaGCGTGCAGCCTTCGGGAACACCAGTCTTCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RGLRLTLLLKAA*RAAFGNTSLRM Trigger: CATCCGAAGACTGGTGTTCCCGAAGGCTGCACGCCAGGCTGCCTTCAGAAGCAGTGTCAGTCGCAGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | GCAGCGTGCGGACAGGCTCAGGATGCTGTCCTGCTCTaGCGTGGTCTTCAGAGGCAACTCCTTCAGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: AACGQAQDAVLL*RGLQRQLLQLP Trigger: AGGCAGCTGAAGGAGTTGCCTCTGAAGACCACGCCAGAGCAGGACAGCATCCTGAGCCTGTCCGCACGCTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000238488.2 |
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| CDS CCA 72 bp | GGGAGCCATTGTGCAGCTGGAGAGCCATGGCCGCTTTaGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: GSHCAAGEPWPL*CGSVVVAGPVY Trigger: GTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CAA 72 bp | TGGGAGCCATTGTGCAGCTGGAGAGCCATGGCCGCTTaGGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: WEPLCSWRAMAA*VWICSGSRPGL Trigger: TAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CCA 72 bp | CCATTGTGCAGCTGGAGAGCCATGGCCGCTTTGGTGTaGATCTGTAGTGGTAGCCGGCCCGGTCTACACACT | + |
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Preference number: 6 (lower is better) Translates to: PLCSWRAMAALV*ICSGSRPGLHT Trigger: AGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CCA 72 bp | ATGTGTCCTGGGAGCCATTGTGCAGCTGGAGAGCCATaGCCGCTTTGGTGTGGATCTGTAGTGGTAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: MCPGSHCAAGEP*PLWCGSVVVAG Trigger: GCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCCAGGACACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CAA 90 bp | AATGTGTCCTGGGAGCCATTGTGCAGCTGGAGAGCCATGGCCGCTTaGGTGTGGATCTGTAGTGGTAGCCGGCCCGGTCTACACACTCGA | + |
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Preference number: 6 (lower is better) Translates to: NVSWEPLCSWRAMAA*VWICSGSRPGLHTR Trigger: TCGAGTGTGTAGACCGGGCCGGCTACCACTACAGATCCACACCAAAGCGGCCATGGCTCTCCAGCTGCACAATGGCTCCCAGGACACATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109800.2 |
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| CDS CCA 72 bp | CCTGGCGTGCAGCCTTCGGGAACACCAGTCTTCGGATaGGGGACACAAAGCCCTTCTTCCCTTTCTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PGVQPSGTPVFG*GTQSPSSLSWL Trigger: AAGCCAAGAAAGGGAAGAAGGGCTTTGTGTCCCCCATCCGAAGACTGGTGTTCCCGAAGGCTGCACGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109800.2 ENSMUST00000127898.9 ENSMUST00000129377.8 ENSMUST00000238488.2 |
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