Pregenerated sensors for CCM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000378Ensembl transcript IDs: ENSMUST00000000388.15, ENSMUST00000109721.3, ENSMUST00000109722.9, ENSMUST00000159007.8, ENSMUST00000160633.8, ENSMUST00000161501.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTaGCCTGTGGGGCACATGTCCTGTGGCAGCTCTCCACTCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ATGIAEPLRNRHRGF*PVGHMSCGSSPLLH Trigger: GTGAAGGAGTGGAGAGCTGCCACAGGACATGTGCCCCACAGGGCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR CCA 90 bp | ATGTCCACTTTCGTGGAAGAGTCATCACTGTGCAGCGACAGGTGGTaGGTAGGTGTGGAAGCCCCATCAAATATTGCTCGGTCCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: MSTFVEESSLCSDRW*VGVEAPSNIARSRK Trigger: CTTTCTGGACCGAGCAATATTTGATGGGGCTTCCACACCTACCCACCACCTGTCGCTGCACAGTGATGACTCTTCCACGAAAGTGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCCCTGGGATGGCTGTGTaGGACAAGTGTGTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PLPSSKLGKAGTQVWALLPGMAV*DKCVLS Trigger: GGACAGCACACACTTGTCTCACACAGCCATCCCAGG...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCCAGGAAGGCCTGGGATaGCTGTGTGAGACAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSLAPSWERLALRSGHSQEGLG*LCETSV Trigger: CACACTTGTCTCACACAGCCATCCCAGGCCTTCCTG...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGGCTGGCACTCAGGTCTaGGCACTCCTCCCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKAGTQV*ALLPGR Trigger: CCTTCCTGGGAGGAGTGCCCAGACCTGAGTGCCAGC...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCAGGCACAGAGGTTTCTaGCCTGTGGGGCACATGTCC | + |
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Preference number: 2 (lower is better) Translates to: EESHVQISAVQGQAGRTGRHRGF*PVGHMS Trigger: GGACATGTGCCCCACAGGGCAGAAACCTCTGTGCCT...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCGCTGGCACTCAGGTCTaGGCACTCCTCCCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LHSFTVEDLATRATFLFSAGTQV*ALLPGR Trigger: CCTTCCTGGGAGGAGTGCCCAGACCTGAGTGCCAGC...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCTCCGAGGTTTCTGCCCTGTaGGGCACATGTCCTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ESHVQISAVQGQAGRTGSEVSAL*GTCPVA Trigger: TGCCACAGGACATGTGCCCCACAGGGCAGAAACCTC...GGAGCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCCAGGAAGGCCTGGGATaGCTGTGTGAGACAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: WGYATGIAEPLRNRHRGFQEGLG*LCETSV Trigger: CACACTTGTCTCACACAGCCATCCCAGGCCTTCCTG...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR CCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCCAGGAAGGCCTGGGATaGCTGTGTGAGACAAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GYATGIAEPLRNRHRGFCQEGLG*LCETSV Trigger: CACACTTGTCTCACACAGCCATCCCAGGCCTTCCTG...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCATGTCCACTTTCGTGGAAGAGTCATCACTGTGCAGCGACAGGTGGTGGAGCCCCATCAAATATTaGTCGGTCCAGAAAGTCGAT | + |
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Preference number: 2 (lower is better) Translates to: SFMSTFVEESSLCSDRWWSPIKY*SVQKVD Trigger: ATCGACTTTCTGGACCGAGCAATATTTGATGGGGCT...CCACCACCTGTCGCTGCACAGTGATGACTCTTCCACGAAAGTGGACATGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCACCTGGGATGGCTGTGTaGGACAAGTGTGTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AVNLFLRSLRSRRGKSCAPGMAV*DKCVLS Trigger: GGACAGCACACACTTGTCTCACACAGCCATCCCAGG...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCAAGGCACAGAGGTTTCTaGCCTGTGGGGCACATGTCC | + |
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Preference number: 2 (lower is better) Translates to: AVNLFLRSLRSRRGKSCARHRGF*PVGHMS Trigger: GGACATGTGCCCCACAGGGCAGAAACCTCTGTGCCT...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR CCA 72 bp | CCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTaGGCACTCCTCCCAGGAAGGCCTGGGATGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: PSSKLGKAGTQV*ALLPGRPGMAV Trigger: CACAGCCATCCCAGGCCTTCCTGGGAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR GCA 72 bp | ATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTaGCCTGTGGGGCACATGTCCTGTGGCAGCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: IAEPLRNRHRGF*PVGHMSCGSSP Trigger: TGGAGAGCTGCCACAGGACATGTGCCCCACAGGGCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| 3UTR GCA 72 bp | CAGGTGGTGGGTAGGTGTGGAAGCCCCATCAAATATTaGTCGGTCCAGAAAGTCGATGGTGGACTCCGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QVVGRCGSPIKY*SVQKVDGGLRV Trigger: TACACGGAGTCCACCATCGACTTTCTGGACCGAGCAATATTTGATGGGGCTTCCACACCTACCCACCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
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| 3UTR CCA 72 bp | TTCGTGGAAGAGTCATCACTGTGCAGCGACAGGTGGTaGGTAGGTGTGGAAGCCCCATCAAATATTGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: FVEESSLCSDRW*VGVEAPSNIAR Trigger: CCGAGCAATATTTGATGGGGCTTCCACACCTACCCACCACCTGTCGCTGCACAGTGATGACTCTTCCACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
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| 3UTR CCA 72 bp | AAGCCCCATCAAATATTGCTCGGTCCAGAAAGTCGATaGTGGACTCCGTGTAAACAATCTGGAAGACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KPHQILLGPESR*WTPCKQSGRPG Trigger: GCCAGGTCTTCCAGATTGTTTACACGGAGTCCACCATCGACTTTCTGGACCGAGCAATATTTGATGGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
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| CDS-3UTR GCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCGCCAGCACCACAGTGTaGAGAGGGCGCCTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSASTTV*RGRLSV Trigger: GACAGAGAGGCGCCCTCTGCACACTGTGGTGCTGGC...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000388.15 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCGCAGTTCCGTGGCGCTaGTGCTCAGCTCGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLAVPWR*CSARSH Trigger: GTGAGAGCGAGCTGAGCACCAGCGCCACGGAACTGC...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCAGCAGTTCCGTGGCGCTaGTGCTCAGCTCGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWAAVPWR*CSARSH Trigger: GTGAGAGCGAGCTGAGCACCAGCGCCACGGAACTGC...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCCCACTCATCCCCCTCTaGGGGCGCAGAGCGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSPLIPL*GRRAVI Trigger: GATGACCGCTCTGCGCCCTCAGAGGGGGATGAGTGG...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCGATGACCAGGCAACATaGCTCTACTGGCCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSDDQAT*LYWPHC Trigger: GCAGTGGGGCCAGTAGAGGCATGTTGCCTGGTCATC...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCCCGGGAAGCAGAAGGTaGTGGCGTCAGCATCGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLPGSRR*WRQHRN Trigger: GTTACGATGCTGACGCCAGCACCTTCTGCTTCCCGG...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCAGCTGGGAGAGATGCCTaGGTCCTGGGCTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWAAGRDA*VLGCLQ Trigger: CTGAAGACAGCCCAGGACCCAGGCATCTCTCCCAGC...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCTCTGCACACAGACTCTaGCTGGGAGAGATGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLSAHRL*LGEMPG Trigger: CCCAGGCATCTCTCCCAGCCAGAGTCTGTGTGCAGA...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTGTAGGCAGACAGACTaGGCACAGCATCGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSCRQTD*AQHRAP Trigger: AGGAGCACGATGCTGTGCTCAGTCTGTCTGCCTACA...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCTGGTCCTGTTCCCATTaGTGGTGGATGTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLWSCSH*WWMWRW Trigger: CCACCTCCACATCCACCATCAATGGGAACAGGACCA...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCCACTCATCCCCCTCTaGGGGCGCAGAGCGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSPLIPL*GRRAVI Trigger: GATGACCGCTCTGCGCCCTCAGAGGGGGATGAGTGG...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGACAGCATCGTGCTCCTaGGTCAGGTGCCCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKTASCS*VRCPGS Trigger: GCTTCCTGGGCACCTGACTCAGGAGCACGATGCTGT...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCCAAGTAGCAGGAACTTaGGGCTGTCCCCATAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLQVAGT*GCPHRA Trigger: AGCTCTATGGGGACAGCCGCAAGTTCCTGCTACTTG...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAGGTGCCCAGGAAGCTaGTGGGACCGCTTTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSRCPGS*WDRFAL Trigger: CAAGGCAAAGCGGTCCCACCAGCTTCCTGGGCACCT...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCGCTGGGAGAGATGCCTaGGTCCTGGGCTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGAGRDA*VLGCLQ Trigger: CTGAAGACAGCCCAGGACCCAGGCATCTCTCCCAGC...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCGCTGGGAGAGATGCCTaGGTCCTGGGCTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSAGRDA*VLGCLQ Trigger: CTGAAGACAGCCCAGGACCCAGGCATCTCTCCCAGC...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCTGCAGCAGTTCCGTaGCGCTGGTGCTCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSPAAVP*RWCSAR Trigger: GCGAGCTGAGCACCAGCGCCACGGAACTGCTGCAGG...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGGATGACCAGGCAACATaGCTCTACTGGCCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKDDQAT*LYWPHC Trigger: GCAGTGGGGCCAGTAGAGGCATGTTGCCTGGTCATC...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCCCGGGAAGCAGAAGGTaGTGGCGTCAGCATCGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSPGSRR*WRQHRN Trigger: GTTACGATGCTGACGCCAGCACCTTCTGCTTCCCGG...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGAGCGGTCATCAGGGCTaGCTGTGGTCCTGTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKSGHQG*LWSCSH Trigger: ATGGGAACAGGACCACAGGCAGCCCTGATGACCGCT...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCAGGTGCCCAGGAAGCTaGTGGGACCGCTTTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSRCPGS*WDRFAL Trigger: CAAGGCAAAGCGGTCCCACCAGCTTCCTGGGCACCT...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCCCTGCAGCAGTTCCGTaGCGCTGGTGCTCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: WGYATGIAEPLRNRHRGFPAAVP*RWCSAR Trigger: GCGAGCTGAGCACCAGCGCCACGGAACTGCTGCAGG...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCCCTGCAGCAGTTCCGTaGCGCTGGTGCTCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCPAAVP*RWCSAR Trigger: GCGAGCTGAGCACCAGCGCCACGGAACTGCTGCAGG...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCAAGAGCTGCGAACTGCTaGATCTCCTGTGATGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWARAANC*ISCDDS Trigger: GCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCT...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | CACTTTCGTGGAAGAGTCATCACTGTGCAGCGACAGGTGGTGGGTAGGTGTGGAAGGTGCCCAGGAAGCTaGTGGGACCGCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFRGRVITVQRQVVGRCGRCPGS*WDRFTS Trigger: GGAGGTGAAGCGGTCCCACCAGCTTCCTGGGCACCT...TCCACACCTACCCACCACCTGTCGCTGCACAGTGATGACTCTTCCACGAAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCGCTTTGCCTTGTCTATaGAATGCAGGATTTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSALPCL*NAGFPS Trigger: GGACGGAAATCCTGCATTTCATAGACAAGGCAAAGC...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCGCTTTGCCTTGTCTATaGAATGCAGGATTTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLALPCL*NAGFPS Trigger: GGACGGAAATCCTGCATTTCATAGACAAGGCAAAGC...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCTCTGGAAGACCTGGCTaGGCAGGGAGCACAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSSGRPG*AGSTTL Trigger: AAGAGTTGTGCTCCCTGCTCAGCCAGGTCTTCCAGA...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCCTCAGGGCACGACGATaGCTACCAAAGCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSLRARR*LPKLSV Trigger: CACTGACAGCTTTGGTAGGCATCGTCGTGCCCTGAG...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCAGCGGTCATCAGGGCTaGCTGTGGTCCTGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPSGHQG*LWSCSH Trigger: ATGGGAACAGGACCACAGGCAGCCCTGATGACCGCT...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCAAGTCCTGGTCCATGCTaGAGCCTAGCGCTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWASPGPC*SLALQY Trigger: ATATTGAAGCGCTAGGCTGCAGCATGGACCAGGACT...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCTCCCTGAGTCCTGGTCCATaGTGCAGCCTAGCGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESHVQISAVQGQAGRTGSLSPGP*CSLALQ Trigger: TTGAAGCGCTAGGCTGCAGCATGGACCAGGACTCAG...GGAGCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCCTGAGTCCTGGTCCATaGTGCAGCCTAGCGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGLSPGP*CSLALQ Trigger: TTGAAGCGCTAGGCTGCAGCATGGACCAGGACTCAG...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTAGGTGCCCAGGAAGCTaGTGGGACCGCTTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTRCPGS*WDRFAL Trigger: CAAGGCAAAGCGGTCCCACCAGCTTCCTGGGCACCT...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCTCTGCACACAGACTCTaGCTGGGAGAGATGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSSAHRL*LGEMPG Trigger: CCCAGGCATCTCTCCCAGCCAGAGTCTGTGTGCAGA...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCGCAGTTCCGTGGCGCTaGTGCTCAGCTCGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCAVPWR*CSARSH Trigger: GTGAGAGCGAGCTGAGCACCAGCGCCACGGAACTGC...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCCCTCCAGGCCAACTTaGCATTGTAGGCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSPSRPT*HCRQTD Trigger: GTCTGTCTGCCTACAATGTCAAGTTGGCCTGGAGGG...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCTCAGCTCGCTCTCACTaGCAGTCTTGCTATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSSARSH*QSCYGV Trigger: CACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGA...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGATGACCAGGCAACATaGCTCTACTGGCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTDDQAT*LYWPHC Trigger: GCAGTGGGGCCAGTAGAGGCATGTTGCCTGGTCATC...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCAGCCCCATCAAATATTaGTCGGTCCAGAAAGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLSPIKY*SVQKVD Trigger: ATCGACTTTCTGGACCGAGCAATATTTGATGGGGCT...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCCCAGAAAGTCGATGGTaGACTCCGTGTAAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLPESRW*TPCKQS Trigger: AGATTGTTTACACGGAGTCCACCATCGACTTTCTGG...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCATGTCCACTTTCGTaGAAGAGTCATCACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSSCPLS*KSHHCA Trigger: TGCACAGTGATGACTCTTCCACGAAAGTGGACATGA...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCTGTAGGCAGACAGACTaGGCACAGCATCGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSCRQTD*AQHRAP Trigger: AGGAGCACGATGCTGTGCTCAGTCTGTCTGCCTACA...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTCCCTCCAGGCCAACTTaGCATTGTAGGCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTPSRPT*HCRQTD Trigger: GTCTGTCTGCCTACAATGTCAAGTTGGCCTGGAGGG...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCAGTCTTGCTATGGGGTaGTGTCTGCATGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPSLAMG*CLHAEG Trigger: CCCTTCTGCATGCAGACATCACCCCATAGCAAGACT...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCTCAGCTCGCTCTCACTaGCAGTCTTGCTATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSSARSH*QSCYGV Trigger: CACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGA...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCAAGTTTTCAAAGTGCTaGCTGTCCTTCTCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PLPSSKLGKAGTQVWALLKFSKC*LSFSGM Trigger: CATACCTGAGAAGGACAGTCAGCACTTTGAAAACTT...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCCAGGACCACCAGGTGTaGAGCATCATCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPQDHQV*SIISDI Trigger: TATGTCCGAGATGATGCTGCACACCTGGTGGTCCTG...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR GCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCTCAGGGCACGACGATaGCTACCAAAGCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSLRARR*LPKLSV Trigger: CACTGACAGCTTTGGTAGGCATCGTCGTGCCCTGAG...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCAGCGGTCATCAGGGCTaGCTGTGGTCCTGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGYATGIAEPLRNRHRGFSGHQG*LWSCSH Trigger: ATGGGAACAGGACCACAGGCAGCCCTGATGACCGCT...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAGTCCTGGTCCATGCTaGAGCCTAGCGCTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSSPGPC*SLALQY Trigger: ATATTGAAGCGCTAGGCTGCAGCATGGACCAGGACT...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCAGGTAGCCGGGAATaGATGTTAACTGACCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLAPSWERLALRSGHSSGSRE*MLTDLN Trigger: ATTTAGGTCAGTTAACATCCATTCCCGGCTACCTGA...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGACAGCAGCGATATCATaGATGGGCACCCTGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKTAAIS*MGTLRI Trigger: TATCCTCAGGGTGCCCATCCATGATATCGCTGCTGT...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCATCATGTCCACTTTCGTaGAAGAGTCATCACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWASCPLS*KSHHCA Trigger: TGCACAGTGATGACTCTTCCACGAAAGTGGACATGA...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCAGAGCTGCGAACTGCTaGATCTCCTGTGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSRAANC*ISCDDS Trigger: GCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCT...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGGTGTGGAAGCCCCATCAAATATTGCTCGGTCCAGAAAGTCGATGGTGGATGCCCAGGAAGCTGGTaGGACCGCTTCACCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRCGSPIKYCSVQKVDGGCPGSW*DRFTSF Trigger: GAAGGAGGTGAAGCGGTCCCACCAGCTTCCTGGGCA...TCCACCATCGACTTTCTGGACCGAGCAATATTTGATGGGGCTTCCACACCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCGCTTTGCCTTGTCTATaGAATGCAGGATTTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSALPCL*NAGFPS Trigger: GGACGGAAATCCTGCATTTCATAGACAAGGCAAAGC...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGTAGGCAGACAGACTaGGCACAGCATCGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGYATGIAEPLRNRHRGFCRQTD*AQHRAP Trigger: AGGAGCACGATGCTGTGCTCAGTCTGTCTGCCTACA...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGTCTGGAAGACCTGGCTaGGCAGGGAGCACAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQSGRPG*AGSTTL Trigger: AAGAGTTGTGCTCCCTGCTCAGCCAGGTCTTCCAGA...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGTCAGCTCGCTCTCACTaGCAGTCTTGCTATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQSARSH*QSCYGV Trigger: CACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGA...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGTGGTCCTGTTCCCATTaGTGGTGGATGTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQWSCSH*WWMWRW Trigger: CCACCTCCACATCCACCATCAATGGGAACAGGACCA...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTCAATTCCAGGCTTCTTaGCCTTCTTGCCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTQFQAS*PSCPPP Trigger: AGGAGGAGGGCAAGAAGGGCAAGAAGCCTGGAATTG...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000388.15 |
||
| CDS-3UTR GCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCAAGTAGCAGGAACTTaGGGCTGTCCCCATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSQVAGT*GCPHRA Trigger: AGCTCTATGGGGACAGCCGCAAGTTCCTGCTACTTG...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCCTGAGTCCTGGTCCATaGTGCAGCCTAGCGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCLSPGP*CSLALQ Trigger: TTGAAGCGCTAGGCTGCAGCATGGACCAGGACTCAG...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCATCAGGTAGCCGGGAATaGATGTTAACTGACCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLPSSKLGKAGTQVWASGSRE*MLTDLN Trigger: ATTTAGGTCAGTTAACATCCATTCCCGGCTACCTGA...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCACAGCAGCGATATCATaGATGGGCACCCTGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPTAAIS*MGTLRI Trigger: TATCCTCAGGGTGCCCATCCATGATATCGCTGCTGT...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCTCCGGTCCAGAAAGTCGATaGTGGACTCCGTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ESHVQISAVQGQAGRTGSGPESR*WTPCKQ Trigger: TTGTTTACACGGAGTCCACCATCGACTTTCTGGACC...GGAGCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGTAGGTGTGGAAGCCCCATCAAATATTGCTCGGTCCAGAAAGTCGATGTGTAGGCAGACAGACTaGGCACAGCATCGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWVGVEAPSNIARSRKSMCRQTD*AQHRAP Trigger: AGGAGCACGATGCTGTGCTCAGTCTGTCTGCCTACA...CATCGACTTTCTGGACCGAGCAATATTTGATGGGGCTTCCACACCTACCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTGCTGGCGTCAGCATCGTAACTGTCCTTCATGTCCACTTTCGTGGAAGCCCTCCAGGCCAACTTaGCATTGTAGGCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRCWRQHRNCPSCPLSWKPSRPT*HCRQTD Trigger: GTCTGTCTGCCTACAATGTCAAGTTGGCCTGGAGGG...CTTCCACGAAAGTGGACATGAAGGACAGTTACGATGCTGACGCCAGCACCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR TCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCAGTCTTGCTATGGGGTaGTGTCTGCATGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCSLAMG*CLHAEG Trigger: CCCTTCTGCATGCAGACATCACCCCATAGCAAGACT...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | CCCATCAAATATTGCTCGGTCCAGAAAGTCGATGGTGGACTCCGTGTAAACAATGCCAGCACCACAGTGTaGAGAGGGCGCCTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PIKYCSVQKVDGGLRVNNASTTV*RGRLSV Trigger: GACAGAGAGGCGCCCTCTGCACACTGTGGTGCTGGC...ATTGTTTACACGGAGTCCACCATCGACTTTCTGGACCGAGCAATATTTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGGCCTTGTCTATGAAATaGAGGATTTCCGTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKALSMK*RISVLL Trigger: CAGTAGGACGGAAATCCTGCATTTCATAGACAAGGC...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCCAGGACCACCAGGTGTaGAGCATCATCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCQDHQV*SIISDI Trigger: TATGTCCGAGATGATGCTGCACACCTGGTGGTCCTG...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCAGGACCACCAGGTGTaGAGCATCATCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQQDHQV*SIISDI Trigger: TATGTCCGAGATGATGCTGCACACCTGGTGGTCCTG...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCACAGCAGCGATATCATaGATGGGCACCCTGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSTAAIS*MGTLRI Trigger: TATCCTCAGGGTGCCCATCCATGATATCGCTGCTGT...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCCCAGAAAGTCGATGGTaGACTCCGTGTAAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGPESRW*TPCKQS Trigger: AGATTGTTTACACGGAGTCCACCATCGACTTTCTGG...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCGGTCCAGAAAGTCGATaGTGGACTCCGTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPGPESR*WTPCKQ Trigger: TTGTTTACACGGAGTCCACCATCGACTTTCTGGACC...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGAGAGCTGCGAACTGCTaGATCTCCTGTGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQRAANC*ISCDDS Trigger: GCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCT...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCCGTCTTTCACGCCAATaGTCTCCAGGAAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGRLSRQ*SPGSFQ Trigger: TTGAAAACTTCCTGGAGACCATTGGCGTGAAAGACG...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGTTTTCAAAGTGCTaGCTGTCCTTCTCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSKFSKC*LSFSGM Trigger: CATACCTGAGAAGGACAGTCAGCACTTTGAAAACTT...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCAAGTTTTCAAAGTGCTaGCTGTCCTTCTCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGKFSKC*LSFSGM Trigger: CATACCTGAGAAGGACAGTCAGCACTTTGAAAACTT...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTATCACTACTGATGTCTaGAATCATGCGGTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTITTDV*NHAVPL Trigger: GAGTGGGACCGCATGATTTCAGACATCAGTAGTGAT...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCGGAATGGATGTTAACTaGCCTAAATACTCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGPGHQSYLSLQPLPSSGMDVN*PKYSFS Trigger: GGAGAACGAGTATTTAGGTCAGTTAACATCCATTCC...GGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCGGAATGGATGTTAACTaGCCTAAATACTCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EESHVQISAVQGQAGRTGGMDVN*PKYSFS Trigger: GGAGAACGAGTATTTAGGTCAGTTAACATCCATTCC...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | TTCATGTCCACTTTCGTGGAAGAGTCATCACTGTGCAGCGACAGGTGGTGGGTACAGGACCACCAGGTGTaGAGCATCATCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: FMSTFVEESSLCSDRWWVQDHQV*SIISDI Trigger: TATGTCCGAGATGATGCTGCACACCTGGTGGTCCTG...TACCCACCACCTGTCGCTGCACAGTGATGACTCTTCCACGAAAGTGGACATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR GCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCAGCCCCATCAAATATTaGTCGGTCCAGAAAGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPSPIKY*SVQKVD Trigger: ATCGACTTTCTGGACCGAGCAATATTTGATGGGGCT...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAAGCCCCATCAAATATTGCTCGGTCCAGAAAGTCGATGGTGGACTCCGACAGCAGCGATATCATaGATGGGCACCCTGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VWKPHQILLGPESRWWTPTAAIS*MGTLRI Trigger: TATCCTCAGGGTGCCCATCCATGATATCGCTGCTGT...CGGAGTCCACCATCGACTTTCTGGACCGAGCAATATTTGATGGGGCTTCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161501.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCTCATGTCCACTTTCGTaGAAGAGTCATCACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTVEDLATRATFLFSPSSCPLS*KSHHCA Trigger: TGCACAGTGATGACTCTTCCACGAAAGTGGACATGA...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | CACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCCGTCTTTCACGCCAATaGTCTCCAGGAAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSFTVEDLATRATFLFSPRLSRQ*SPGSFQ Trigger: TTGAAAACTTCCTGGAGACCATTGGCGTGAAAGACG...GGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGATCACTACTGATGTCTaGAATCATGCGGTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQITTDV*NHAVPL Trigger: GAGTGGGACCGCATGATTTCAGACATCAGTAGTGAT...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCATCACTACTGATGTCTaGAATCATGCGGTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGYATGIAEPLRNRHRGFITTDV*NHAVPL Trigger: GAGTGGGACCGCATGATTTCAGACATCAGTAGTGAT...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTCCAGAAAGTCGATGGTaGACTCCGTGTAAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EEESHVQISAVQGQAGRTPESRW*TPCKQS Trigger: AGATTGTTTACACGGAGTCCACCATCGACTTTCTGG...AGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | CTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCGGAATGGATGTTAACTaGCCTAAATACTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSFTVEDLATRATFLFSGMDVN*PKYFTS Trigger: GGAGGTGAAGTATTTAGGTCAGTTAACATCCATTCC...GCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000388.15 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCACCACTCATCCCCCTCTaGGGGCGCAGAGCGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCAPLIPL*GRRAVI Trigger: GATGACCGCTCTGCGCCCTCAGAGGGGGATGAGTGG...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCGCCTTGTCTATGAAATaGAGGATTTCCGTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GYATGIAEPLRNRHRGFCALSMK*RISVLL Trigger: CAGTAGGACGGAAATCCTGCATTTCATAGACAAGGC...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCCGTCTTTCACGCCAATaGTCTCCAGGAAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGYATGIAEPLRNRHRGFRLSRQ*SPGSFQ Trigger: TTGAAAACTTCCTGGAGACCATTGGCGTGAAAGACG...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCATCTGGAAGACCTGGCTaGGCAGGGAGCACAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCASGRPG*AGSTTL Trigger: AAGAGTTGTGCTCCCTGCTCAGCCAGGTCTTCCAGA...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCATGGTCCTGTTCCCATTaGTGGTGGATGTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCAWSCSH*WWMWRW Trigger: CCACCTCCACATCCACCATCAATGGGAACAGGACCA...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCACTCAGGGCACGACGATaGCTACCAAAGCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCALRARR*LPKLSV Trigger: CACTGACAGCTTTGGTAGGCATCGTCGTGCCCTGAG...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCAAGTCTTGCTATGGGGTaGTGTCTGCATGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCASLAMG*CLHAEG Trigger: CCCTTCTGCATGCAGACATCACCCCATAGCAAGACT...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCACAAGTAGCAGGAACTTaGGGCTGTCCCCATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCAQVAGT*GCPHRA Trigger: AGCTCTATGGGGACAGCCGCAAGTTCCTGCTACTTG...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCAAGTCCTGGTCCATGCTaGAGCCTAGCGCTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCASPGPC*SLALQY Trigger: ATATTGAAGCGCTAGGCTGCAGCATGGACCAGGACT...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTAAACTTGTTTTTAAGGTCTCTGAGAAGTAGAAGAGGAAAGTCATGTGCAGGTCCAGAAAGTCGATaGTGGACTCCGTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: AVNLFLRSLRSRRGKSCAGPESR*WTPCKQ Trigger: TTGTTTACACGGAGTCCACCATCGACTTTCTGGACC...TGCACATGACTTTCCTCTTCTACTTCTCAGAGACCTTAAAAACAAGTTTACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS CCA 90 bp | TCCGTGGCGCTGGTGCTCAGCTCGCTCTCACTGACAGTCTTGCTATaGGGTGATGTCTGCATGCAGAAGGGTAAGGGCGGCAGGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVALVLSSLSLTVLL*GDVCMQKGKGGRPP Trigger: GGGAGGCCTGCCGCCCTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCACCAGCGCCACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS GCA 90 bp | AGGGCGGCAGGCCTCCCACATCCCCAGAGTCCGGGAAGCAGAAGGTaGTGGCGTCAGCATCGTAACTGTCCTTCATGTCCACTTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAAGLPHPQSPGSRR*WRQHRNCPSCPLSW Trigger: CCACGAAAGTGGACATGAAGGACAGTTACGATGCTGACGCCAGCACCTTCTGCTTCCCGGACTCTGGGGATGTGGGAGGCCTGCCGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTCACAATTCCAGGCTTCTaGCCCTTCTTGCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPSSKLGKAGTQVWALLTIPGF*PFLPSS Trigger: GGAGGAGGGCAAGAAGGGCAAGAAGCCTGGAATTGT...GAGGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000388.15 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCATCTTCAGCGGCGACCTaGCTCTCTGTGGCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LQPLPSSKLGKAGTQVWASSAAT*LSVAMM Trigger: CATCATGGCCACAGAGAGCAAGGTCGCCGCTGAAGA...TGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
||
| CDS GCA 90 bp | GTGCTCAGCTCGCTCTCACTGACAGTCTTGCTATGGGGTGATGTCTaGATGCAGAAGGGTAAGGGCGGCAGGCCTCCCACATCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSSLSLTVLLWGDV*MQKGKGGRPPTSPE Trigger: CTCTGGGGATGTGGGAGGCCTGCCGCCCTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CCA 90 bp | GCGGCAGGCCTCCCACATCCCCAGAGTCCGGGAAGCAGAAGGTGCTaGCGTCAGCATCGTAACTGTCCTTCATGTCCACTTTCGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AAGLPHPQSPGSRRC*RQHRNCPSCPLSWK Trigger: CTTCCACGAAAGTGGACATGAAGGACAGTTACGATGCTGACGCCAGCACCTTCTGCTTCCCGGACTCTGGGGATGTGGGAGGCCTGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CCA 90 bp | AAGGAACCTGCGCTGAGGCCTCTAGAACTTTCTGCACACAGACTCTaGCTGGGAGAGATGCCTGGGTCCTGGGCTGTCTTCAGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: KEPALRPLELSAHRL*LGEMPGSWAVFRTT Trigger: GGTGGTCCTGAAGACAGCCCAGGACCCAGGCATCTCTCCCAGCCAGAGTCTGTGTGCAGAAAGTTCTAGAGGCCTCAGCGCAGGTTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000160633.8 |
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| CDS TCA 90 bp | AGTCCTGCAGCAGTTCCGTGGCGCTGGTGCTCAGCTCGCTCTCACTaGCAGTCTTGCTATGGGGTGATGTCTGCATGCAGAAGGGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: SPAAVPWRWCSARSH*QSCYGVMSACRRVR Trigger: CCTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCACCAGCGCCACGGAACTGCTGCAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCCCTAGCTCCAAGCTGGGAAAGGCTGGCACTCAGGTCTGGGCACTCCTGGGACCGCTTTGCCTaGTCTATGAAATGCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: SPSLAPSWERLALRSGHSWDRFA*SMKCRI Trigger: AATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCA...GGAGTGCCCAGACCTGAGTGCCAGCCTTTCCCAGCTTGGAGCTAGGGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 90 bp | GAGTCAGGTGCCCAGGAAGCTGGTGGGACCGCTTTGCCTTGTCTATaGAATGCAGGATTTCCGTCCTACTGGAAGGGTTCAGGTAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: ESGAQEAGGTALPCL*NAGFPSYWKGSGSR Trigger: CCGGCTACCTGAACCCTTCCAGTAGGACGGAAATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCACCAGCTTCCTGGGCACCTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000159007.8 ENSMUST00000160633.8 |
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| CDS GCA 90 bp | GGGAGAGATGCCTGGGTCCTGGGCTGTCTTCAGGACCACCAGGTGTaGAGCATCATCTCGGACATAGGAGACAGCAGCGATATCATGGAT | + |
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Preference number: 5 (lower is better) Translates to: GRDAWVLGCLQDHQV*SIISDIGDSSDIMD Trigger: ATCCATGATATCGCTGCTGTCTCCTATGTCCGAGATGATGCTGCACACCTGGTGGTCCTGAAGACAGCCCAGGACCCAGGCATCTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000159007.8 ENSMUST00000160633.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAGTCATGTGCAAATATCAGCTGTCCAGGGCCAGGCCGGCAGGACTGGCTGGATAGAGGCCCCATaGCGGTACTCATGTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: EESHVQISAVQGQAGRTGWIEAP*RYSCSR Trigger: TCTGCTACATGAGTACCGCAATGGGGCCTCTATCCA...GCCAGTCCTGCCGGCCTGGCCCTGGACAGCTGATATTTGCACATGACTTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | AGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCCTAGCTCCAAGTGGATAGAGGCCCCATaGCGGTACTCATGTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RGPGHQSYLSLQPLPSSKWIEAP*RYSCSR Trigger: TCTGCTACATGAGTACCGCAATGGGGCCTCTATCCA...CTTGGAGCTAGGGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 90 bp | CTGAGTCCTGGTCCATGCTGCAGCCTAGCGCTTCAATATCACTACTaGTGTCTGAAATCATGCGGTCCCACTCATCCCCCTCTGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LSPGPCCSLALQYHY*CLKSCGPTHPPLRA Trigger: CGCCCTCAGAGGGGGATGAGTGGGACCGCATGATTTCAGACATCAGTAGTGATATTGAAGCGCTAGGCTGCAGCATGGACCAGGACTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS GCA 90 bp | TTCCCATTGATGGTGGATGTGGAGGTGGTACTCAGGGCACGACGATaGCTACCAAAGCTGTCAGTGATGATGCCACGGCCGTCTTTCACG | + |
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Preference number: 5 (lower is better) Translates to: FPLMVDVEVVLRARR*LPKLSVMMPRPSFT Trigger: CGTGAAAGACGGCCGTGGCATCATCACTGACAGCTTTGGTAGGCATCGTCGTGCCCTGAGTACCACCTCCACATCCACCATCAATGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 90 bp | CATGATGACCAGGCAACATGCCTCTACTGGCCCCACTGCACTTTCTaGCAAGGAACCTGCGCTGAGGCCTCTAGAACTTTCTGCACACAG | + |
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Preference number: 5 (lower is better) Translates to: HDDQATCLYWPHCTF*QGTCAEASRTFCTQ Trigger: CTGTGTGCAGAAAGTTCTAGAGGCCTCAGCGCAGGTTCCTTGTCAGAAAGTGCAGTGGGGCCAGTAGAGGCATGTTGCCTGGTCATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000160633.8 |
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| CDS GCA 90 bp | TGGATAGAGGCCCCATTGCGGTACTCATGTAGCAGAGCTGCGAACTaGTGGATCTCCTGTGATGACAGCTTCGTACGTAACGTGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: WIEAPLRYSCSRAAN*WISCDDSFVRNVSM Trigger: CATGCTCACGTTACGTACGAAGCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCTGCTACATGAGTACCGCAATGGGGCCTCTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | TCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGCCCCTCCAAGCCCCATCAAATATaGCTCGGTCCAGAAAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SFTVEDLATRATFLFSPSKPHQI*LGPESR Trigger: TCGACTTTCTGGACCGAGCAATATTTGATGGGGCTT...GGAGGGGCTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGTGGATAGAGGCCCCATaGCGGTACTCATGTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQWIEAP*RYSCSR Trigger: TCTGCTACATGAGTACCGCAATGGGGCCTCTATCCA...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 90 bp | CGGCCGTCTTTCACGCCAATGGTCTCCAGGAAGTTTTCAAAGTGCTaGCTGTCCTTCTCAGGTATGAAGGGTCTGAGACCAAGTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RPSFTPMVSRKFSKC*LSFSGMKGLRPSSR Trigger: CCTGCTACTTGGTCTCAGACCCTTCATACCTGAGAAGGACAGTCAGCACTTTGAAAACTTCCTGGAGACCATTGGCGTGAAAGACGGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGGGACCGCTTTGCCTaGTCTATGAAATGCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: WGYATGIAEPLRNRHRGFWDRFA*SMKCRI Trigger: AATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCA...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | TCTCCACTCCTTCACAGTAGAGGACCTGGCCACCAGAGCTACCTTTCTCTTCAGTGGGACCGCTTTGCCTaGTCTATGAAATGCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: SPLLHSRGPGHQSYLSLQWDRFA*SMKCRI Trigger: AATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCA...CTGAAGAGAAAGGTAGCTCTGGTGGCCAGGTCCTCTACTGTGAAGGAGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | GGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCTGCAAGCCCCATCAAATATaGCTCGGTCCAGAAAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: GYATGIAEPLRNRHRGFCKPHQI*LGPESR Trigger: TCGACTTTCTGGACCGAGCAATATTTGATGGGGCTT...GCAGAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS-3UTR CAA 90 bp | TGGGGATATGCTACAGGCATTGCTGAGCCCCTGAGGAATAGGCACAGAGGTTTCAAGCCCCATCAAATATaGCTCGGTCCAGAAAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: WGYATGIAEPLRNRHRGFKPHQI*LGPESR Trigger: TCGACTTTCTGGACCGAGCAATATTTGATGGGGCTT...GAAACCTCTGTGCCTATTCCTCAGGGGCTCAGCAATGCCTGTAGCATATCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CCA 90 bp | AATGCAGGATTTCCGTCCTACTGGAAGGGTTCAGGTAGCCGGGAATaGATGTTAACTGACCTAAATACTTCTTGCCCTTCTTGCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NAGFPSYWKGSGSRE*MLTDLNTSCPSCPP Trigger: AGGAGGGCAAGAAGGGCAAGAAGTATTTAGGTCAGTTAACATCCATTCCCGGCTACCTGAACCCTTCCAGTAGGACGGAAATCCTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159007.8 |
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| CDS CAA 90 bp | AGCAGTTCCGTGGCGCTGGTGCTCAGCTCGCTCTCACTGACAGTCTaGCTATGGGGTGATGTCTGCATGCAGAAGGGTAAGGGCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSVALVLSSLSLTV*LWGDVCMQKGKGGR Trigger: CCTGCCGCCCTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCACCAGCGCCACGGAACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS GCA 72 bp | GCCTGGGTCCTGGGCTGTCTTCAGGACCACCAGGTGTaGAGCATCATCTCGGACATAGGAGACAGCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: AWVLGCLQDHQV*SIISDIGDSSD Trigger: ATCGCTGCTGTCTCCTATGTCCGAGATGATGCTGCACACCTGGTGGTCCTGAAGACAGCCCAGGACCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000159007.8 ENSMUST00000160633.8 |
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| CDS GCA 72 bp | GGCCTCCCACATCCCCAGAGTCCGGGAAGCAGAAGGTaGTGGCGTCAGCATCGTAACTGTCCTTCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPHPQSPGSRR*WRQHRNCPSCP Trigger: TGGACATGAAGGACAGTTACGATGCTGACGCCAGCACCTTCTGCTTCCCGGACTCTGGGGATGTGGGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CAA 72 bp | TGGCTGAGCAGGGAGCACAACTCTTCAGCGGCGACCTaGCTCTCTGTGGCCATGATGACCAGGCAACATGCC | + |
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Preference number: 6 (lower is better) Translates to: WLSREHNSSAAT*LSVAMMTRQHA Trigger: GGCATGTTGCCTGGTCATCATGGCCACAGAGAGCAAGGTCGCCGCTGAAGAGTTGTGCTCCCTGCTCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000160633.8 |
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| CDS GCA 72 bp | ATGGTGGATGTGGAGGTGGTACTCAGGGCACGACGATaGCTACCAAAGCTGTCAGTGATGATGCCACGGCCG | + |
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Preference number: 6 (lower is better) Translates to: MVDVEVVLRARR*LPKLSVMMPRP Trigger: CGGCCGTGGCATCATCACTGACAGCTTTGGTAGGCATCGTCGTGCCCTGAGTACCACCTCCACATCCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CCA 72 bp | CTGGTGCTCAGCTCGCTCTCACTGACAGTCTTGCTATaGGGTGATGTCTGCATGCAGAAGGGTAAGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LVLSSLSLTVLL*GDVCMQKGKGG Trigger: GCCGCCCTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 72 bp | TGGTGGACTCCGTGTAAACAATCTGGAAGACCTGGCTaGGCAGGGAGCACAACTCTTCAGCGGCGACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: WWTPCKQSGRPG*AGSTTLQRRPC Trigger: GCAAGGTCGCCGCTGAAGAGTTGTGCTCCCTGCTCAGCCAGGTCTTCCAGATTGTTTACACGGAGTCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000160633.8 |
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| CDS TCA 72 bp | GCTGGATCTCCTGTGATGACAGCTTCGTACGTAACGTaGGCATGTAGTCCTGCAGCAGTTCCGTGGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGSPVMTASYVT*ACSPAAVPWRW Trigger: CCAGCGCCACGGAACTGCTGCAGGACTACATGCTCACGTTACGTACGAAGCTGTCATCACAGGAGATCCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CAA 72 bp | GTGGCGCTGGTGCTCAGCTCGCTCTCACTGACAGTCTaGCTATGGGGTGATGTCTGCATGCAGAAGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: VALVLSSLSLTV*LWGDVCMQKGK Trigger: CTTACCCTTCTGCATGCAGACATCACCCCATAGCAAGACTGTCAGTGAGAGCGAGCTGAGCACCAGCGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 72 bp | CAGGCAACATGCCTCTACTGGCCCCACTGCACTTTCTaGCAAGGAACCTGCGCTGAGGCCTCTAGAACTTTC | + |
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Preference number: 6 (lower is better) Translates to: QATCLYWPHCTF*QGTCAEASRTF Trigger: GAAAGTTCTAGAGGCCTCAGCGCAGGTTCCTTGTCAGAAAGTGCAGTGGGGCCAGTAGAGGCATGTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000160633.8 |
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| CDS CAA 72 bp | CGCAGGCTGATGCAAAACTCATGGATAGAGGCCCCATaGCGGTACTCATGTAGCAGAGCTGCGAACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RRLMQNSWIEAP*RYSCSRAANCW Trigger: CCAGCAGTTCGCAGCTCTGCTACATGAGTACCGCAATGGGGCCTCTATCCATGAGTTTTGCATCAGCCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 72 bp | GCCCAGGAAGCTGGTGGGACCGCTTTGCCTTGTCTATaGAATGCAGGATTTCCGTCCTACTGGAAGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: AQEAGGTALPCL*NAGFPSYWKGS Trigger: TGAACCCTTCCAGTAGGACGGAAATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCACCAGCTTCCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000159007.8 ENSMUST00000160633.8 |
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| CDS GCA 72 bp | GCCCCATTGCGGTACTCATGTAGCAGAGCTGCGAACTaGTGGATCTCCTGTGATGACAGCTTCGTACGTAAC | + |
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Preference number: 6 (lower is better) Translates to: APLRYSCSRAAN*WISCDDSFVRN Trigger: GTTACGTACGAAGCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCTGCTACATGAGTACCGCAATGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS CAA 72 bp | GTCAGGTGCCCAGGAAGCTGGTGGGACCGCTTTGCCTaGTCTATGAAATGCAGGATTTCCGTCCTACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VRCPGSWWDRFA*SMKCRISVLLE Trigger: TTCCAGTAGGACGGAAATCCTGCATTTCATAGACAAGGCAAAGCGGTCCCACCAGCTTCCTGGGCACCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 ENSMUST00000159007.8 ENSMUST00000160633.8 |
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| CDS CCA 72 bp | CCATTGCGGTACTCATGTAGCAGAGCTGCGAACTGCTaGATCTCCTGTGATGACAGCTTCGTACGTAACGTG | + |
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Preference number: 6 (lower is better) Translates to: PLRYSCSRAANC*ISCDDSFVRNV Trigger: CACGTTACGTACGAAGCTGTCATCACAGGAGATCCAGCAGTTCGCAGCTCTGCTACATGAGTACCGCAATGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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| CDS TCA 72 bp | TTCACGCCAATGGTCTCCAGGAAGTTTTCAAAGTGCTaGCTGTCCTTCTCAGGTATGAAGGGTCTGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: FTPMVSRKFSKC*LSFSGMKGLRP Trigger: TGGTCTCAGACCCTTCATACCTGAGAAGGACAGTCAGCACTTTGAAAACTTCCTGGAGACCATTGGCGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000388.15 ENSMUST00000109721.3 ENSMUST00000109722.9 |
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