Pregenerated sensors for CCL28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074715Ensembl transcript IDs: ENSMUST00000099241.4
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCATGCCTTTGATCCTAGCATTTAGGAAGCTAGGTGGATCTCTGTaGGTTTGGGACCAGCCTGGTCTGCTTAGCTGGTTCTGGGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: CMPLILAFRKLGGSL*VWDQPGLLSWFWAS Trigger: ACTGGCCCAGAACCAGCTAAGCAGACCAGGCTGGTCCCAAACTCACAGAGATCCACCTAGCTTCCTAAATGCTAGGATCAAAGGCATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | CACCCACAGTGCTGGTGGCAGATGTGTTCATGCTATAAACCAGCATaGGTCCCCTTGCCCTTTGGGAACACAAGTGACAGAGTTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: HPQCWWQMCSCYKPA*VPLPFGNTSDRVPF Trigger: GAAGGGAACTCTGTCACTTGTGTTCCCAAAGGGCAAGGGGACTCATGCTGGTTTATAGCATGAACACATCTGCCACCAGCACTGTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | AGCTGCTTGCTTCTTGGTGGTGTGAAACAAAGACAGGACACACCCTaGAGGGAAGACTCCACATTCCAGTTTTTCCCTGCTTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SCLLLGGVKQRQDTP*REDSTFQFFPASQE Trigger: CTCCTGGGAAGCAGGGAAAAACTGGAATGTGGAGTCTTCCCTTCAGGGTGTGTCCTGTCTTTGTTTCACACCACCAAGAAGCAAGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 90 bp | GCTGGTGGCAGATGTGTTCATGCTATAAACCAGCATGAGTCCCCTTaGCCTTTGGGAACACAAGTGACAGAGTTCCCTTCCCATCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: AGGRCVHAINQHESP*PLGTQVTEFPSHLH Trigger: ATGGAGATGGGAAGGGAACTCTGTCACTTGTGTTCCCAAAGGGCAAGGGGACTCATGCTGGTTTATAGCATGAACACATCTGCCACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | ACTCCACATTCCAGTTTTTCCCTGCTTCCCAGGAGCACCACAGGATaGAGAACAAGCAAACCTTCAATACACAGGCCGTTGAGGACACTT | + |
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Preference number: 1 (lower is better) Translates to: TPHSSFSLLPRSTTG*RTSKPSIHRPLRTL Trigger: AAGTGTCCTCAACGGCCTGTGTATTGAAGGTTTGCTTGTTCTTCATCCTGTGGTGCTCCTGGGAAGCAGGGAAAAACTGGAATGTGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | TGGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTGGTGGTGTaGAACAAAGACAGGACACACCCTGAAGGGAAGACTCCACATTCC | + |
|
Preference number: 1 (lower is better) Translates to: WWKYETKEAACFLVV*NKDRTHPEGKTPHS Trigger: GGAATGTGGAGTCTTCCCTTCAGGGTGTGTCCTGTCTTTGTTTCACACCACCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 90 bp | CCTGTGATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTTGTaGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PVIHYHWACGRQNIL*WKYETKEAACFLVV Trigger: CACCACCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGATCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 90 bp | TTTTGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTGGTaGTGTGAAACAAAGACAGGACACACCCTGAAGGGAAGACTCCAC | + |
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Preference number: 1 (lower is better) Translates to: FCGGNMRPRKLLASW*CETKTGHTLKGRLH Trigger: GTGGAGTCTTCCCTTCAGGGTGTGTCCTGTCTTTGTTTCACACCACCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 90 bp | AATACAGCCATTGCTCTGAGAACCACAACAGAAGAGAGAAGTTTCTaGACAGTGAGGCCAGGTTTCTCAGTGCTAGAGTTTACAACAGGG | + |
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Preference number: 1 (lower is better) Translates to: NTAIALRTTTEERSF*TVRPGFSVLEFTTG Trigger: CCCTGTTGTAAACTCTAGCACTGAGAAACCTGGCCTCACTGTCCAGAAACTTCTCTCTTCTGTTGTGGTTCTCAGAGCAATGGCTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 90 bp | ATATTTTGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTaGTGGTGTGAAACAAAGACAGGACACACCCTGAAGGGAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: IFCGGNMRPRKLLAS*WCETKTGHTLKGRL Trigger: GAGTCTTCCCTTCAGGGTGTGTCCTGTCTTTGTTTCACACCACCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | TTAAATCCAGTGTTGCTTTCTTTGGCATTTAGGCCTGCACTTTGGTaGTGCCTCTCAAAGTCATGCCAGAGTCGAACAGAAAAATGCTAT | + |
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Preference number: 1 (lower is better) Translates to: LNPVLLSLAFRPALW*CLSKSCQSRTEKCY Trigger: ATAGCATTTTTCTGTTCGACTCTGGCATGACTTTGAGAGGCATCACCAAAGTGCAGGCCTAAATGCCAAAGAAAGCAACACTGGATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | AAAGGGGAGAGAGAGAGAGCGAGAGCGAGAGAGAGAGAGATTGATTaGTTGATTCTTGTTAAGAACAATACAAAATTACCCACCAATCCA | + |
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Preference number: 1 (lower is better) Translates to: KGERERARAREREID*LILVKNNTKLPTNP Trigger: TGGATTGGTGGGTAATTTTGTATTGTTCTTAACAAGAATCAATCAATCAATCTCTCTCTCTCTCGCTCTCGCTCTCTCTCTCTCCCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 90 bp | CCTCTAAGCACCACTTACTTGGCTTATACCCTCCTACTTAGAAAATaGTGTTATAGAGCCACAAAGGAGACAAGAAGTGTACAAATCTTC | + |
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Preference number: 1 (lower is better) Translates to: PLSTTYLAYTLLLRK*CYRATKETRSVQIF Trigger: GAAGATTTGTACACTTCTTGTCTCCTTTGTGGCTCTATAACATCATTTTCTAAGTAGGAGGGTATAAGCCAAGTAAGTGGTGCTTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CAA 90 bp | GGCAGATGTGTTCATGCTATAAACCAGCATGAGTCCCCTTGCCCTTaGGGAACACAAGTGACAGAGTTCCCTTCCCATCTCCATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GRCVHAINQHESPCP*GTQVTEFPSHLHVH Trigger: GTGGACATGGAGATGGGAAGGGAACTCTGTCACTTGTGTTCCCAAAGGGCAAGGGGACTCATGCTGGTTTATAGCATGAACACATCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGCAGACAGAATATTTTGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGGACACCTCACACCCTaGAAACCTGCCCCTGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: PVADRIFCGGNMRPRKLLGHLTP*KPAPAL Trigger: TAGAGCAGGGGCAGGTTTTCAGGGTGTGAGGTGTCC...AAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CAA 90 bp | CAGCCTGTGATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTaGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QPVIHYHWACGRQNI*WWKYETKEAACFLV Trigger: CACCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGATCACAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTCTATGAATGTGGCTTTTGCCAAGAATCATCACCCACAGTGCTGGTGGAGTCAAGTGCGGTGGTaGATGCCTTTGATCCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SWSMNVAFAKNHHPQCWWSQVRW*MPLILA Trigger: TGCTAGGATCAAAGGCATGCACCACCGCACTTGACT...CCACCAGCACTGTGGGTGATGATTCTTGGCAAAAGCCACATTCATAGACCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | GAACCTGTAAGAGTCCAGGAATGGGGACACTTCTTTGTGTGCTATTTGTACCTCCTGAAAACCTGCCCCTaGTCTAATGGCTCTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: EPVRVQEWGHFFVCYLYLLKTCP*SNGSPG Trigger: TCCAGGAGAGCCATTAGAGCAGGGGCAGGTTTTCAG...GAGGTACAAATAGCACACAAAGAAGTGTCCCCATTCCTGGACTCTTACAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTCCCAGGAGCACCACAGGATGAAGAACAAGCAAACCTTCAATACACAGGAAGAGAGAAGTTTCTaGACAGTGAGGCCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PASQEHHRMKNKQTFNTQEERSF*TVRPGF Trigger: GAAACCTGGCCTCACTGTCCAGAAACTTCTCTCTTC...CTGTGTATTGAAGGTTTGCTTGTTCTTCATCCTGTGGTGCTCCTGGGAAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTTGTGGTGGAAATATGAGCACACCCTGAAAACCTaGCCCTGCTCTAATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: IHYHWACGRQNILWWKYEHTLKT*PCSNGS Trigger: AGAGCCATTAGAGCAGGGGCAGGTTTTCAGGGTGTG...CTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGAACCTGTAAGAGTCCAGGAATGGGGACACTTCTTTGTGTGCTATTTGCCAGTCAGACAAACCTaGGATGTAGAGCTAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: QGEPVRVQEWGHFFVCYLPVRQT*DVELAL Trigger: TAGAGCTAGCTCTACATCCCAGGTTTGTCTGACTGG...CAAATAGCACACAAAGAAGTGTCCCCATTCCTGGACTCTTACAGGTTCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CAA 90 bp | AGAGCCACAAAGGAGACAAGAAGTGTACAAATCTTCCTAGGAAGCTaGAAATGGAAAAGTCTGACCACCAGGACCAGTCAGACAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: RATKETRSVQIFLGS*KWKSLTTRTSQTNL Trigger: CAGGTTTGTCTGACTGGTCCTGGTGGTCAGACTTTTCCATTTCAAGCTTCCTAGGAAGATTTGTACACTTCTTGTCTCCTTTGTGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTCCCAGGAGCACCACAGGATGAAGAACAAGCAAACCTTCAATACACAGTCAATATTTAATTGTTaGCAGGAAGCCCAGCAACAC | + |
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Preference number: 2 (lower is better) Translates to: PASQEHHRMKNKQTFNTQSIFNC*QEAQQH Trigger: GTGTTGCTGGGCTTCCTGCCAACAATTAAATATTGA...CTGTGTATTGAAGGTTTGCTTGTTCTTCATCCTGTGGTGCTCCTGGGAAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAACACCCATTGTGCTGGAGGAGCTGAGAGTTCTACATCTTCATCCAAAGAAACGTGTTTATTCTTaGGGGATAGCAAGCGAAATT | + |
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Preference number: 2 (lower is better) Translates to: PATPIVLEELRVLHLHPKKRVYS*GIASEI Trigger: AATTTCGCTTGCTATCCCTCAAGAATAAACACGTTT...CTTTGGATGAAGATGTAGAACTCTCAGCTCCTCCAGCACAATGGGTGTTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGCCAGGAGCAGACTCGAGCTTTACTCAACACACACAACACACCCCACACTTTCTAAAAGTCTGTaGTATGAAGTAAGAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: KEARSRLELYSTHTTHPTLSKSL*YEVREG Trigger: TCCTTCTCTTACTTCATAGCACAGACTTTTAGAAAG...TGTGGGGTGTGTTGTGTGTGTTGAGTAAAGCTCGAGTCTGCTCCTGGCTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGTCTATGAATGTGGCTTTTGCCAAGAATCATCACCCACAGTGCTGGTGGCTTAAATCCATATGTTaGCATTTGGAGATGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SWSMNVAFAKNHHPQCWWLKSIC*HLEMGH Trigger: ATGCCCCATCTCCAAATGCCAACATATGGATTTAAG...CCACCAGCACTGTGGGTGATGATTCTTGGCAAAAGCCACATTCATAGACCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATGCTATACTTCCGGACAAAACTTAATGATAGTTTCTAAGACTGACCTGGAAGTTTCTGGACAGTaGGGCCAGGTTTCTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: EKCYTSGQNLMIVSKTDLEVSGQ*GQVSQC Trigger: GCACTGAGAAACCTGGCCTCACTGTCCAGAAACTTC...CAGGTCAGTCTTAGAAACTATCATTAAGTTTTGTCCGGAAGTATAGCATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGAATATTTTGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTGGATTTATAACCAGATATaGGCCAGTTCACTTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: DRIFCGGNMRPRKLLASWIYNQI*ASSLEE Trigger: CTCCTCAAGTGAACTGGCCCATATCTGGTTATAAAT...CCAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCAAAGTCATGCCAGAGTCGAACAGAAAAATGCTATACTTCCGGACAAAACTCCTACTTAGAAAATaGTGTTATAGAGCCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLKVMPESNRKMLYFRTKLLLRK*CYRATK Trigger: CTTTGTGGCTCTATAACATCATTTTCTAAGTAGGAG...TTTTGTCCGGAAGTATAGCATTTTTCTGTTCGACTCTGGCATGACTTTGAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATGCTATACTTCCGGACAAAACTTAATGATAGTTTCTAAGACTGACCTGCAGTTTCCTCTGCTTTaGGGGTATGTGGTTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: EKCYTSGQNLMIVSKTDLQFPLL*GYVVKC Trigger: GCACTTAACCACATACCCTCAAAGCAGAGGAAACTG...CAGGTCAGTCTTAGAAACTATCATTAAGTTTTGTCCGGAAGTATAGCATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATGCTATACTTCCGGACAAAACTTAATGATAGTTTCTAAGACTGACCTGGTAAGAGTCCAGGAATaGGGACACTTCTTTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: EKCYTSGQNLMIVSKTDLVRVQE*GHFFVC Trigger: GCACACAAAGAAGTGTCCCCATTCCTGGACTCTTAC...CAGGTCAGTCTTAGAAACTATCATTAAGTTTTGTCCGGAAGTATAGCATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGACTGACCTGATGAAAAGCTGTCACAAACCAAAAACTGAAGCATTTCGCTTAGGACTGAAGTGTTaGTATGTGTTCTCCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: SKTDLMKSCHKPKTEAFRLGLKC*YVFSRY Trigger: ATATCTGGAGAACACATAGCAACACTTCAGTCCTAA...GCGAAATGCTTCAGTTTTTGGTTTGTGACAGCTTTTCATCAGGTCAGTCTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATGCTATACTTCCGGACAAAACTTAATGATAGTTTCTAAGACTGACCTGCTAGGAAGCTTGAAATaGAAAAGTCTGACCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: EKCYTSGQNLMIVSKTDLLGSLK*KSLTTR Trigger: CCTGGTGGTCAGACTTTTCCATTTCAAGCTTCCTAG...CAGGTCAGTCTTAGAAACTATCATTAAGTTTTGTCCGGAAGTATAGCATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCAGATATTTATGTATCCTTAAATCCATATGTTGGCATTTGGAGATGGGGCTAACCAGATATAAGTaGCAAGGTCTTAGGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSRYLCILKSICWHLEMGLTRYK*QGLRCS Trigger: AGAACACCTAAGACCTTGGCACTTATATCTGGTTAG...CCCCATCTCCAAATGCCAACATATGGATTTAAGGATACATAAATATCTGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 72 bp | GTCTGCTTAGCTGGTTCTGGGCCAGTCAGAGCTCCATaGGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VCLAGSGPVRAP*ASLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCGCATGGAGCTCTGACTGGCCCAGAACCAGCTAAGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 72 bp | TGGGGCCTGCAAGGAGAACCTGTAAGAGTCCAGGAATaGGGACACTTCTTTGTGTGCTATTTGTACCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: WGLQGEPVRVQE*GHFFVCYLYLQ Trigger: CTGGAGGTACAAATAGCACACAAAGAAGTGTCCCCATTCCTGGACTCTTACAGGTTCTCCTTGCAGGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | TTGATCCTAGCATTTAGGAAGCTAGGTGGATCTCTGTaGGTTTGGGACCAGCCTGGTCTGCTTAGCTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: LILAFRKLGGSL*VWDQPGLLSWF Trigger: GAACCAGCTAAGCAGACCAGGCTGGTCCCAAACTCACAGAGATCCACCTAGCTTCCTAAATGCTAGGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | TGCTGGTGGCAGATGTGTTCATGCTATAAACCAGCATaGGTCCCCTTGCCCTTTGGGAACACAAGTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: CWWQMCSCYKPA*VPLPFGNTSDR Trigger: TCTGTCACTTGTGTTCCCAAAGGGCAAGGGGACTCATGCTGGTTTATAGCATGAACACATCTGCCACCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | TCCAGTTTTTCCCTGCTTCCCAGGAGCACCACAGGATaGAGAACAAGCAAACCTTCAATACACAGGCCGTTG | + |
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Preference number: 3 (lower is better) Translates to: SSFSLLPRSTTG*RTSKPSIHRPL Trigger: CAACGGCCTGTGTATTGAAGGTTTGCTTGTTCTTCATCCTGTGGTGCTCCTGGGAAGCAGGGAAAAACTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 72 bp | AGGTTGAGGCCCATCTTGGTCTATGAATGTGGCTTTTaGCAAGAATCATCACCCACAGTGCTGGTGGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: RLRPILVYECGF*QESSPTVLVAD Trigger: ATCTGCCACCAGCACTGTGGGTGATGATTCTTGGCAAAAGCCACATTCATAGACCAAGATGGGCCTCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | TATGAGACCAAGGAAGCTGCTTGCTTCTTGGTGGTGTaGAACAAAGACAGGACACACCCTGAAGGGAAGACT | + |
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Preference number: 3 (lower is better) Translates to: YETKEAACFLVV*NKDRTHPEGKT Trigger: AGTCTTCCCTTCAGGGTGTGTCCTGTCTTTGTTTCACACCACCAAGAAGCAAGCAGCTTCCTTGGTCTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 72 bp | AGATGTGTTCATGCTATAAACCAGCATGAGTCCCCTTaGCCTTTGGGAACACAAGTGACAGAGTTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RCVHAINQHESP*PLGTQVTEFPS Trigger: GGAAGGGAACTCTGTCACTTGTGTTCCCAAAGGGCAAGGGGACTCATGCTGGTTTATAGCATGAACACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 72 bp | TACCACTGGGCCTGTGGCAGACAGAATATTTTGTGGTaGAAATATGAGACCAAGGAAGCTGCTTGCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: YHWACGRQNILW*KYETKEAACFL Trigger: CAAGAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CCA 72 bp | CATTACCACTGGGCCTGTGGCAGACAGAATATTTTGTaGTGGAAATATGAGACCAAGGAAGCTGCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: HYHWACGRQNIL*WKYETKEAACF Trigger: GAAGCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 72 bp | ATGAATGTGGCTTTTGCCAAGAATCATCACCCACAGTaGTGGTGGCAGATGTGTTCATGCTATAAACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: MNVAFAKNHHPQ*WWQMCSCYKPA Trigger: TGCTGGTTTATAGCATGAACACATCTGCCACCAGCACTGTGGGTGATGATTCTTGGCAAAAGCCACATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | TTTATTTTGGCTCTCGATTTTAGAAGTTTCAGCCTGTaGTCCATTACCACTGGGCCTGTGGCAGACAGAATA | + |
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Preference number: 3 (lower is better) Translates to: FILALDFRSFSL*SITTGPVADRI Trigger: TATTCTGTCTGCCACAGGCCCAGTGGTAATGGATCACAGGCTGAAACTTCTAAAATCGAGAGCCAAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR GCA 72 bp | CACAAACCAAAAACTGAAGCATTTCGCAGTTTCCTCTaGTTTGAGGGTATGTGGTTAAGTGCATTGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: HKPKTEAFRSFL*FEGMWLSALSQ Trigger: CTGACTCAATGCACTTAACCACATACCCTCAAAGCAGAGGAAACTGCGAAATGCTTCAGTTTTTGGTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATGTAGGTGGCAGGTATGTATATAGCCCATGTTCCATTCTTTCAACTCCTCTTTTGGTGCTGGGATaGAACCTACATGTACAACCC | + |
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Preference number: 3 (lower is better) Translates to: NNVGGRYVYSPCSILSTPLLVLG*NLHVQP Trigger: GGGTTGTACATGTAGGTTCAATCCCAGCACCAAAAG...AGGAGTTGAAAGAATGGAACATGGGCTATATACATACCTGCCACCTACATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CAA 90 bp | ATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTTGTGGTGGAAATATGAGTTCTTTGTGTGCTATTaGTACCTCCAGGTAATCCTA | + |
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Preference number: 3 (lower is better) Translates to: IHYHWACGRQNILWWKYEFFVCY*YLQVIL Trigger: TAGGATTACCTGGAGGTACAAATAGCACACAAAGAA...CTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCAAAGTCATGCCAGAGTCGAACAGAAAAATGCTATACTTCCGGACAAAAAAAACGTGTTTATTCTaGAGGGATAGCAAGCGAAAT | + |
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Preference number: 3 (lower is better) Translates to: PLKVMPESNRKMLYFRTKKTCLF*RDSKRN Trigger: ATTTCGCTTGCTATCCCTCAAGAATAAACACGTTTT...TTTTGTCCGGAAGTATAGCATTTTTCTGTTCGACTCTGGCATGACTTTGAGAGG 40% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | ACCACTTACTTGGCTTATACCCTCCTACTTAGAAAATaGTGTTATAGAGCCACAAAGGAGACAAGAAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: TTYLAYTLLLRK*CYRATKETRSV Trigger: TACACTTCTTGTCTCCTTTGTGGCTCTATAACATCATTTTCTAAGTAGGAGGGTATAAGCCAAGTAAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | AGAGAGCGAGAGCGAGAGAGAGAGAGATTGATTGATTaGTTCTTGTTAAGAACAATACAAAATTACCCACCA | + |
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Preference number: 3 (lower is better) Translates to: RERERERERLID*FLLRTIQNYPP Trigger: TGGTGGGTAATTTTGTATTGTTCTTAACAAGAATCAATCAATCAATCTCTCTCTCTCTCGCTCTCGCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR TCA 72 bp | AGAGAGAGAGCGAGAGCGAGAGAGAGAGAGATTGATTaGTTGATTCTTGTTAAGAACAATACAAAATTACCC | + |
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Preference number: 3 (lower is better) Translates to: RERARAREREID*LILVKNNTKLP Trigger: GGGTAATTTTGTATTGTTCTTAACAAGAATCAATCAATCAATCTCTCTCTCTCTCGCTCTCGCTCTCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTAAGAACAATACAAAATTACCCACCAATCCAGGACTGATCCCTGTATTTACAGTTTTGTTTGTTTaGCTTTTGGTGCTGGGATTG | + |
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Preference number: 3 (lower is better) Translates to: LVKNNTKLPTNPGLIPVFTVLFV*LLVLGL Trigger: CAATCCCAGCACCAAAAGCAAAACAAACAAAACTGT...AAATACAGGGATCAGTCCTGGATTGGTGGGTAATTTTGTATTGTTCTTAACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR-3UTR CAA 90 bp | AGACAGGAAAGAGAACACCTGAGAGATGATTTTATATTGAAAACACTAAAGCACTTTGGAGATGGGGCATaGAGTGTAGTTGGTGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: RQEREHLRDDFILKTLKHFGDGA*SVVGVK Trigger: TTTAACACCAACTACACTCAATGCCCCATCTCCAAA...GTGCTTTAGTGTTTTCAATATAAAATCATCTCTCAGGTGTTCTCTTTCCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR GCA 90 bp | CCTGCTTCCCAGGAGCACCACAGGATGAAGAACAAGCAAACCTTCAATACACAGCAGCTCTCTGGATGCTaGATGAACTCACTCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PASQEHHRMKNKQTFNTQQLSGC*MNSLFP Trigger: TGGAAAGAGTGAGTTCATGCAGCATCCAGAGAGCTG...CTGTGTATTGAAGGTTTGCTTGTTCTTCATCCTGTGGTGCTCCTGGGAAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR GCA 90 bp | CAAGGAGAACCTGTAAGAGTCCAGGAATGGGGACACTTCTTTGTGTGCTATTTGTGCTTTCTCGTAGTGTaGCCTTTTCTGTCCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QGEPVRVQEWGHFFVCYLCFLVV*PFLSFL Trigger: CAGGAAGGACAGAAAAGGGCACACTACGAGAAAGCA...CAAATAGCACACAAAGAAGTGTCCCCATTCCTGGACTCTTACAGGTTCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| 3UTR CAA 72 bp | ATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTaGTGGTGGAAATATGAGACCAAGGAAGCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IHYHWACGRQNI*WWKYETKEAAC Trigger: GCAAGCAGCTTCCTTGGTCTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR TCA 90 bp | ATCCATTACCACTGGGCCTGTGGCAGACAGAATATTTTGTGGTGGAAATATGAGCTTCTACGTTTAACATaGAGGATGACAGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHYHWACGRQNILWWKYELLRLT*RMTAAR Trigger: CCTGGCTGCTGTCATCCTTCATGTTAAACGTAGAAG...CTCATATTTCCACCACAAAATATTCTGTCTGCCACAGGCCCAGTGGTAATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR GCA 90 bp | GGAAGCCCAGCAACACCCATTGTGCTGGAGGAGCTGAGAGTTCTACATCTTCATAACATACGTTTTCTCTaGCATTCTTCTTTACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSPATPIVLEELRVLHLHNIRFL*HSSLPL Trigger: CAGAGGTAAAGAAGAATGGCAGAGAAAACGTATGTT...ATGAAGATGTAGAACTCTCAGCTCCTCCAGCACAATGGGTGTTGCTGGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCAGATATTTATGTATCCTTAAATCCATATGTTGGCATTTGGAGATGGGGGATGAGACACCTCAGTaGAACAGCTGGAGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: FSRYLCILKSICWHLEMGDETPQ*NSWRPW Trigger: CCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATC...CCCCATCTCCAAATGCCAACATATGGATTTAAGGATACATAAATATCTGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR CCA 90 bp | GAAAAATGCTATACTTCCGGACAAAACTTAATGATAGTTTCTAAGACTGACCTGCCTCAGTGCAACAGCTaGAGGCCATGGGAAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: EKCYTSGQNLMIVSKTDLPQCNS*RPWEVW Trigger: CCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGG...CAGGTCAGTCTTAGAAACTATCATTAAGTTTTGTCCGGAAGTATAGCATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR TCA 90 bp | AATAATGTAGGTGGCAGGTATGTATATAGCCCATGTTCCATTCTTTCAACTCCTGGGAAGTATGGCTTCTaGGGTTTGAAAAGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: NNVGGRYVYSPCSILSTPGKYGF*GLKSHT Trigger: TGTGTGGCTTTTCAAACCTCAGAAGCCATACTTCCC...AGGAGTTGAAAGAATGGAACATGGGCTATATACATACCTGCCACCTACATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR TCA 90 bp | ATAGCAAGCGAAATTCTAGAAATTAGGACTGAAGTGTTGCTATGTGTTCTCCAGATTCTTCTTTACCTCTaGGGCTCTCATCCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IASEILEIRTEVLLCVLQILLYL*GSHPLL Trigger: AAGCAGTGGATGAGAGCCTCAGAGGTAAAGAAGAAT...CTGGAGAACACATAGCAACACTTCAGTCCTAATTTCTAGAATTTCGCTTGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS-3UTR TCA 90 bp | AGACAGGAAAGAGAACACCTGAGAGATGATTTTATATTGAAAACACTAAAGCACTCTCTGGATGCTGCATaGACTCACTCTTTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQEREHLRDDFILKTLKHSLDAA*THSFQK Trigger: CTTCTGGAAAGAGTGAGTTCATGCAGCATCCAGAGA...GTGCTTTAGTGTTTTCAATATAAAATCATCTCTCAGGTGTTCTCTTTCCTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS CCA 90 bp | TTCCGGAAACATGATGAGACACCTCAGTGCAACAGCTGGAGGCCATaGGAAGTATGGCTTCTGAGGTTTGAAAAGCCACACACACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FRKHDETPQCNSWRP*EVWLLRFEKPHTQP Trigger: TGGCTGTGTGTGTGGCTTTTCAAACCTCAGAAGCCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATCATGTTTCCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS CCA 90 bp | CCAGAAGTCTTCCGGAAACATGATGAGACACCTCAGTGCAACAGCTaGAGGCCATGGGAAGTATGGCTTCTGAGGTTTGAAAAGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: PEVFRKHDETPQCNS*RPWEVWLLRFEKPH Trigger: GTGTGGCTTTTCAAACCTCAGAAGCCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATCATGTTTCCGGAAGACTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS GCA 90 bp | TCACTCTTTCCAGAAGTCTTCCGGAAACATGATGAGACACCTCAGTaGAACAGCTGGAGGCCATGGGAAGTATGGCTTCTGAGGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: SLFPEVFRKHDETPQ*NSWRPWEVWLLRFE Trigger: TTCAAACCTCAGAAGCCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATCATGTTTCCGGAAGACTTCTGGAAAGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS GCA 90 bp | ACGTTTTCTCTGCCATTCTTCTTTACCTCTGAGGCTCTCATCCACTaGTTCAAAGTACGATTGTGCGGGCTGATGCAGATTCTTCTACGT | + |
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Preference number: 5 (lower is better) Translates to: TFSLPFFFTSEALIH*FKVRLCGLMQILLR Trigger: ACGTAGAAGAATCTGCATCAGCCCGCACAATCGTACTTTGAAGCAGTGGATGAGAGCCTCAGAGGTAAAGAAGAATGGCAGAGAAAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS GCA 72 bp | CAGCCAGGTCGCAGTCCCCGTCAGCTCTCTGGATGCTaGATGAACTCACTCTTTCCAGAAGTCTTCCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QPGRSPRQLSGC*MNSLFPEVFRK Trigger: TTTCCGGAAGACTTCTGGAAAGAGTGAGTTCATGCAGCATCCAGAGAGCTGACGGGGACTGCGACCTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS CCA 72 bp | ATGACAGCAGCCAGGTCGCAGTCCCCGTCAGCTCTCTaGATGCTGCATGAACTCACTCTTTCCAGAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: MTAARSQSPSAL*MLHELTLSRSL Trigger: AAGACTTCTGGAAAGAGTGAGTTCATGCAGCATCCAGAGAGCTGACGGGGACTGCGACCTGGCTGCTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS GCA 72 bp | CCAGAAGTCTTCCGGAAACATGATGAGACACCTCAGTaGAACAGCTGGAGGCCATGGGAAGTATGGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PEVFRKHDETPQ*NSWRPWEVWLL Trigger: CAGAAGCCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATCATGTTTCCGGAAGACTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS CCA 72 bp | TTCCGGAAACATGATGAGACACCTCAGTGCAACAGCTaGAGGCCATGGGAAGTATGGCTTCTGAGGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FRKHDETPQCNS*RPWEVWLLRFE Trigger: TTCAAACCTCAGAAGCCATACTTCCCATGGCCTCCAGCTGTTGCACTGAGGTGTCTCATCATGTTTCCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS GCA 72 bp | CTGCCATTCTTCTTTACCTCTGAGGCTCTCATCCACTaGTTCAAAGTACGATTGTGCGGGCTGATGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: LPFFFTSEALIH*FKVRLCGLMQI Trigger: AATCTGCATCAGCCCGCACAATCGTACTTTGAAGCAGTGGATGAGAGCCTCAGAGGTAAAGAAGAATGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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| CDS CAA 72 bp | ACCTCTGAGGCTCTCATCCACTGCTTCAAAGTACGATaGTGCGGGCTGATGCAGATTCTTCTACGTTTAACA | + |
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Preference number: 6 (lower is better) Translates to: TSEALIHCFKVR*CGLMQILLRLT Trigger: TGTTAAACGTAGAAGAATCTGCATCAGCCCGCACAATCGTACTTTGAAGCAGTGGATGAGAGCCTCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099241.4 |
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