Pregenerated sensors for CCL26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070464Ensembl transcript IDs: ENSMUST00000094226.2
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | GAGATGAATCTCTGCACCCATTTGGCCCCTGGCTGGACACAGAATTaGTTACCTGTTTTTGTAAAGAATATCACACCGTCACTGGTGCAG | + |
Preference number: 5 (lower is better) Translates to: EMNLCTHLAPGWTQN*LPVFVKNITPSLVQ Trigger: CTGCACCAGTGACGGTGTGATATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CCA 90 bp | GTGTTCACCAGAGAGATGAATCTCTGCACCCATTTGGCCCCTGGCTaGACACAGAATTGCTTACCTGTTTTTGTAAAGAATATCACACCG | + |
Preference number: 5 (lower is better) Translates to: VFTREMNLCTHLAPG*TQNCLPVFVKNITP Trigger: CGGTGTGATATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCTGGTGAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CCA 90 bp | CCTGGTGTTCACCAGAGAGATGAATCTCTGCACCCATTTGGCCCCTaGCTGGACACAGAATTGCTTACCTGTTTTTGTAAAGAATATCAC | + |
Preference number: 5 (lower is better) Translates to: PGVHQRDESLHPFGP*LDTELLTCFCKEYH Trigger: GTGATATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCTGGTGAACACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CCA 72 bp | ATAGCGATGCTGCTCCCACATGTGGCAACACCAAGCTaGACACTGAGGAAGATGGCCAGGAGAACAAGGAGA | + |
Preference number: 6 (lower is better) Translates to: IAMLLPHVATPS*TLRKMARRTRR Trigger: TCTCCTTGTTCTCCTGGCCATCTTCCTCAGTGTCCAGCTTGGTGTTGCCACATGTGGGAGCAGCATCGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS GCA 72 bp | AAATGGTTCCTGGTGTTCACCAGAGAGATGAATCTCTaGACCCATTTGGCCCCTGGCTGGACACAGAATTGC | + |
Preference number: 6 (lower is better) Translates to: KWFLVFTREMNL*THLAPGWTQNC Trigger: GCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCTGGTGAACACCAGGAACCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CAA 72 bp | CTGGTGTTCACCAGAGAGATGAATCTCTGCACCCATTaGGCCCCTGGCTGGACACAGAATTGCTTACCTGTT | + |
Preference number: 6 (lower is better) Translates to: LVFTREMNLCTH*APGWTQNCLPV Trigger: AACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCTGGTGAACACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS TCA 72 bp | AGAATATCACACCGTCACTGGTGCAGCTCTTGTCGGTaGACTTATAGCTGTACACCCAGCTCCATGGGATCA | + |
Preference number: 6 (lower is better) Translates to: RISHRHWCSSCR*TYSCTPSSMGS Trigger: TGATCCCATGGAGCTGGGTGTACAGCTATAAGTTCACCGACAAGAGCTGCACCAGTGACGGTGTGATATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CAA 90 bp | AGAGATGAATCTCTGCACCCATTTGGCCCCTGGCTGGACACAGAATaGCTTACCTGTTTTTGTAAAGAATATCACACCGTCACTGGTGCA | + |
Preference number: 6 (lower is better) Translates to: RDESLHPFGPWLDTE*LTCFCKEYHTVTGA Trigger: TGCACCAGTGACGGTGTGATATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CCA 72 bp | CACCAGAGAGATGAATCTCTGCACCCATTTGGCCCCTaGCTGGACACAGAATTGCTTACCTGTTTTTGTAAA | + |
Preference number: 6 (lower is better) Translates to: HQRDESLHPFGP*LDTELLTCFCK Trigger: TTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CAA 72 bp | TCTCTGCACCCATTTGGCCCCTGGCTGGACACAGAATaGCTTACCTGTTTTTGTAAAGAATATCACACCGTC | + |
Preference number: 6 (lower is better) Translates to: SLHPFGPWLDTE*LTCFCKEYHTV Trigger: GACGGTGTGATATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |
||
CDS CCA 72 bp | AGAGAGATGAATCTCTGCACCCATTTGGCCCCTGGCTaGACACAGAATTGCTTACCTGTTTTTGTAAAGAAT | + |
Preference number: 6 (lower is better) Translates to: REMNLCTHLAPG*TQNCLPVFVKN Trigger: ATTCTTTACAAAAACAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTCATCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094226.2 |