Pregenerated sensors for CCKAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029193Ensembl transcript IDs: ENSMUST00000031093.5, ENSMUST00000200691.4
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGACTGAAGTCTaGGGGACGCAGGGCTGGCCTGGCTTGACACGCTGGGGGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: VDSEAGASHSSKTEV*GTQGWPGLTRWGHG Trigger: CCCATGCCCCCAGCGTGTCAAGCCAGGCCAGCCCTGCGTCCCTCAGACTTCAGTCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR GCA 90 bp | TTGACACGCTGGGGGCATGGGCAGCTCAGCAGCTGCTCCTCAGTATaGTCCCTCAGACCCGACCATCACTGTAAGATGCCCGTCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: LTRWGHGQLSSCSSV*SLRPDHHCKMPVFS Trigger: TGAAAAGACGGGCATCTTACAGTGATGGTCGGGTCTGAGGGAGCATACTGAGGAGCAGCTGCTGAGCTGCCCATGCCCCCAGCGTGTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR TCA 90 bp | CGCTACTCCCTGTTTTCCTCTTCCACAGAAAGGTTTGAGGTCAATTaGGAGTGTAGGGCCTGGATCAGTGCACGGTTATGGCCCCACGGA | + |
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Preference number: 1 (lower is better) Translates to: RYSLFSSSTERFEVN*ECRAWISARLWPHG Trigger: TCCGTGGGGCCATAACCGTGCACTGATCCAGGCCCTACACTCTCAATTGACCTCAAACCTTTCTGTGGAAGAGGAAAACAGGGAGTAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR CCA 90 bp | ATTTTGAACGTGGACTTGGCAGTGACATTTGTAGCACGAGCCCAGTaGGGTCCCTATCGCTGGCCTGCTGAGGTTTCTCCCATGGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: ILNVDLAVTFVARAQ*GPYRWPAEVSPMVN Trigger: GTTTACCATGGGAGAAACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCACTGCCAAGTCCACGTTCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR CCA 90 bp | TTGGCAGTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTaGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: LAVTFVARAQWGPYR*PAEVSPMVNIMENV Trigger: GACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCACTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR TCA 90 bp | GACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTaGGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTT | + |
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Preference number: 1 (lower is better) Translates to: DICSTSPVGSLSLAC*GFSHGKHYGKCLSV Trigger: AACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR TCA 90 bp | GTATCAAAGGCACTTTTATCCCCTACATCTTTGGTCCTTTCAGTTTaGACTCTGCGTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: VSKALLSPTSLVLSV*TLRLGSETVDSEAG Trigger: ACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGACGCAGAGTTCAAACTGAAAGGACCAAAGATGTAGGGGATAAAAGTGCCTTTGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR TCA 90 bp | TGGCCCCACGGAAAGGAGAAGACGAATGTCCACTCTTTGGATAGCTaGCAGCTCATAGCAGTGAACTTAACTTTCCTTGAATCTTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: WPHGKEKTNVHSLDS*QLIAVNLTFLESFS Trigger: AGAAAAAGATTCAAGGAAAGTTAAGTTCACTGCTATGAGCTGTCAGCTATCCAAAGAGTGGACATTCGTCTTCTCCTTTCCGTGGGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR CCA 90 bp | ACACACTCACACACACAACGAGCCAACTATCAAGAGCTACATCGATaGTATTTAAAAGCATACATAGTTTTGGCATTCAAAGCTACTTAT | + |
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Preference number: 1 (lower is better) Translates to: THSHTQRANYQELHR*YLKAYIVLAFKATY Trigger: ATAAGTAGCTTTGAATGCCAAAACTATGTATGCTTTTAAATACCATCGATGTAGCTCTTGATAGTTGGCTCGTTGTGTGTGTGAGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR GCA 90 bp | GAGGGAGGGAGACAATGTGTGTGTTTGATACACCGGATCAGTATATaGTATCTAGAAATGGTCTTTCACTGTATAATTTATTTCTATTTT | + |
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Preference number: 1 (lower is better) Translates to: EGGRQCVCLIHRISI*YLEMVFHCIIYFYF Trigger: AAAATAGAAATAAATTATACAGTGAAAGACCATTTCTAGATAGCATATACTGATCCGGTGTATCAAACACACACATTGTCTCCCTCCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR GCA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTTCCCCTCCTTTCTGCTaGCCGCAGCGAACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: VTFVARAQWGPYRWPAEVSPPFC*PQRTRY Trigger: GTACCTGGTTCGCTGCGGGCAGCAGAAAGGAGGGGA...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGATCCCCTCCTTTCTGCTaGCCGCAGCGAACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SPFLPGGISGKEEIQVNRSPPFC*PQRTRY Trigger: GTACCTGGTTCGCTGCGGGCAGCAGAAAGGAGGGGA...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGATCAGTGCACGGTTATGGCCCCACGGAAAGGAGAAGACGAATGTCCAGTTTTCCTTGGGGACTaGTTACATATGTTACCACCC | + |
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Preference number: 2 (lower is better) Translates to: GLDQCTVMAPRKGEDECPVFLGD*LHMLPP Trigger: GGGTGGTAACATATGTAATCAGTCCCCAAGGAAAAC...TGGACATTCGTCTTCTCCTTTCCGTGGGGCCATAACCGTGCACTGATCCAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR GCA 90 bp | TCATCCTTCTGCAGCTTGACATTGCTGACAGAAAACAGTTCTAGCTACTGGCCTCTTCCTCTTCCTCCTTaGTCCCAGTCCCCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SSFCSLTLLTENSSSYWPLPLPP*SQSPPF Trigger: GAAAGGAGGGGACTGGGAGCAAGGAGGAAGAGGAAG...AGGCCAGTAGCTAGAACTGTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGGAGCAGAAGAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCTTCCTCTTCCTCCTTaGTCCCAGTCCCCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SSGAEENRAEQCVSMERRLPLPP*SQSPPF Trigger: GAAAGGAGGGGACTGGGAGCAAGGAGGAAGAGGAAG...ACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTCTTCTGCTCCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGGTAAGGACCTCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAGCCTTAAGTTCCTTCTaGAACTTTGTGAAGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CPGKDLSLLTRRHFWKGGALSSF*NFVKGE Trigger: TTCACCCTTCACAAAGTTCCAGAAGGAACTTAAGGC...TCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAGGTCCTTACCTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR CAA 90 bp | TTTTATCCCCTACATCTTTGGTCCTTTCAGTTTGAACTCTGCGTCTaGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FYPLHLWSFQFELCV*ALKLLTVRLVPATP Trigger: AGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGACGCAGAGTTCAAACTGAAAGGACCAAAGATGTAGGGGATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR CCA 90 bp | CCCGGTCTTTATTTTAGGCAGGAAAGGTATGTAAGATCTATTCAAGTATCAAAGGACACGCTGGGGGCATaGGCAGCTCAGCAGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PGLYFRQERYVRSIQVSKDTLGA*AAQQLL Trigger: GAGCAGCTGCTGAGCTGCCCATGCCCCCAGCGTGTC...CTTTGATACTTGAATAGATCTTACATACCTTTCCTGCCTAAAATAAAGACCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR CAA 90 bp | TTATCATTCCTCGCTACTCCCTGTTTTCCTCTTCCACAGAAAGGTTaGAGGTCAATTGAGAGTGTAGGGCCTGGATCAGTGCACGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: LSFLATPCFPLPQKG*RSIESVGPGSVHGY Trigger: ATAACCGTGCACTGATCCAGGCCCTACACTCTCAATTGACCTCAAACCTTTCTGTGGAAGAGGAAAACAGGGAGTAGCGAGGAATGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGACCTTCTGGAACTTTGTaGAGGGTGAAAAGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: SPFLPGGISGKEEIQVNRPSGTL*RVKSRH Trigger: ATGTCTGCTTTTCACCCTTCACAAAGTTCCAGAAGG...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAAGGTGTGTAGCTGTAGTATGTGTGAGAAGTAGGCATGGGGAGGACCAGGCCTTAAGTTCCTTCTaGAACTTTGTGAAGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: MRRCVAVVCVRSRHGEDQALSSF*NFVKGE Trigger: TTCACCCTTCACAAAGTTCCAGAAGGAACTTAAGGC...CTGGTCCTCCCCATGCCTACTTCTCACACATACTACAGCTACACACCTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTCCTTCTGGAACTTTGTaGAGGGTGAAAAGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: WPAEVSPMVNIMENVLAFPSGTL*RVKSRH Trigger: ATGTCTGCTTTTCACCCTTCACAAAGTTCCAGAAGG...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCACACAATACTCCAACTTTTATGGAAGAATGATAACACTTGTTGAGTTCAGCAGTGTGTTAGTATaGAGAGACGTCATCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KLTQYSNFYGRMITLVEFSSVLV*RDVIWG Trigger: GCCCCAGATGACGTCTCTCCATACTAACACACTGCT...GAACTCAACAAGTGTTATCATTCTTCCATAAAAGTTGGAGTATTGTGTGAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR TCA 72 bp | AGACTGAAGTCTGAGGGACGCAGGGCTGGCCTGGCTTaGCACGCTGGGGGCATGGGCAGCTCAGCAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RLKSEGRRAGLA*HAGGMGSSAAA Trigger: AGCAGCTGCTGAGCTGCCCATGCCCCCAGCGTGTCAAGCCAGGCCAGCCCTGCGTCCCTCAGACTTCAGTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR GCA 72 bp | GGCTTGACACGCTGGGGGCATGGGCAGCTCAGCAGCTaGTCCTCAGTATGCTCCCTCAGACCCGACCATCAC | + |
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Preference number: 3 (lower is better) Translates to: GLTRWGHGQLSS*SSVCSLRPDHH Trigger: GTGATGGTCGGGTCTGAGGGAGCATACTGAGGAGCAGCTGCTGAGCTGCCCATGCCCCCAGCGTGTCAAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR GCA 72 bp | TGGGGGCATGGGCAGCTCAGCAGCTGCTCCTCAGTATaGTCCCTCAGACCCGACCATCACTGTAAGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: WGHGQLSSCSSV*SLRPDHHCKMP Trigger: GGGCATCTTACAGTGATGGTCGGGTCTGAGGGAGCATACTGAGGAGCAGCTGCTGAGCTGCCCATGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGACGTGGTCACATGTCATaGGTGGCCATGAGAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: VLALKLLTVRLVPATPLRRGHMS*VAMRRC Trigger: ACACCTTCTCATGGCCACCAATGACATGTGACCACG...TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR TCA 72 bp | AGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTaGGGTTTCTCCCATGGTAAACATTATGGAAAATGT | + |
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Preference number: 3 (lower is better) Translates to: STSPVGSLSLAC*GFSHGKHYGKC Trigger: ACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR CCA 72 bp | ACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTaGCCTGCTGAGGTTTCTCCCATGGTAAACATTATG | + |
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Preference number: 3 (lower is better) Translates to: TFVARAQWGPYR*PAEVSPMVNIM Trigger: CATAATGTTTACCATGGGAGAAACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR GCA 72 bp | TTTTCCTTGGGGACTGATTACATATGTTACCACCCTTaGCCAGGTAAGGACCTCTCCCTTCTTACCCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: FSLGTDYICYHP*PGKDLSLLTRR Trigger: CCTCCGGGTAAGAAGGGAGAGGTCCTTACCTGGGCAAGGGTGGTAACATATGTAATCAGTCCCCAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR TCA 72 bp | CTGTTTTCCTCTTCCACAGAAAGGTTTGAGGTCAATTaGGAGTGTAGGGCCTGGATCAGTGCACGGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: LFSSSTERFEVN*ECRAWISARLW Trigger: CCATAACCGTGCACTGATCCAGGCCCTACACTCTCAATTGACCTCAAACCTTTCTGTGGAAGAGGAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR CCA 72 bp | GGTAAGGACCTCTCCCTTCTTACCCGGAGGCATTTCTaGAAAGGAGGAAATACAGGTGAACAGAAGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: GKDLSLLTRRHF*KGGNTGEQKKV Trigger: CACTTTCTTCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAGGTCCTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CAA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCATTTTGAACGTGGACTaGGCAGTGACATTTGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ENRAEQCVSMERRHLGRSILNVD*AVTFVA Trigger: TGCTACAAATGTCACTGCCAAGTCCACGTTCAAAAT...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGTCATCCTTCTGCAGCTaGACATTGCTGACAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LSLLTRRHFWKGGNTGEQSSFCS*TLLTEN Trigger: GTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA...CTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR TCA 72 bp | CCCCGCCTTAAGTTCCTTCTGGAACTTTGTGAAGGGTaGAAAGCAGACATCGGAAGAGTCCTCGTTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: PRLKFLLELCEG*KADIGRVLVRN Trigger: ATTTCTAACGAGGACTCTTCCGATGTCTGCTTTTCACCCTTCACAAAGTTCCAGAAGGAACTTAAGGCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR GCA 72 bp | TATCCCCTACATCTTTGGTCCTTTCAGTTTGAACTCTaGGTCTTGGCTCTGAAACTGTTGACAGTGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: YPLHLWSFQFEL*VLALKLLTVRL Trigger: CAGCCTCACTGTCAACAGTTTCAGAGCCAAGACGCAGAGTTCAAACTGAAAGGACCAAAGATGTAGGGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR CCA 72 bp | TTCAAGTATCAAAGGCACTTTTATCCCCTACATCTTTaGTCCTTTCAGTTTGAACTCTGCGTCTTGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: FKYQRHFYPLHL*SFQFELCVLAL Trigger: CAGAGCCAAGACGCAGAGTTCAAACTGAAAGGACCAAAGATGTAGGGGATAAAAGTGCCTTTGATACTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| 3UTR-3UTR CAA 90 bp | AAGCTCACACAATACTCCAACTTTTATGGAAGAATGATAACACTTGTTGAGTTCCGTGGTCACATGTCATaGGTGGCCATGAGAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: KLTQYSNFYGRMITLVEFRGHMS*VAMRRC Trigger: ACACCTTCTCATGGCCACCAATGACATGTGACCACG...GAACTCAACAAGTGTTATCATTCTTCCATAAAAGTTGGAGTATTGTGTGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR-3UTR CAA 90 bp | CCCGGTCTTTATTTTAGGCAGGAAAGGTATGTAAGATCTATTCAAGTATCAAAGACAGTGCATACAAACTaGTTTCTGTTGAAAGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: PGLYFRQERYVRSIQVSKTVHTN*FLLKGS Trigger: TGAACCTTTCAACAGAAACAAGTTTGTATGCACTGT...CTTTGATACTTGAATAGATCTTACATACCTTTCCTGCCTAAAATAAAGACCGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS-3UTR GCA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCCATATCGGCTGCTGCTaGTACCGCCGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ENRAEQCVSMERRHLGRSHIGCC*YRRRRR Trigger: GCGGCGGCGGCGGCGGTAGCAGCAGCAGCCGATATG...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR TCA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTGCCAGGCATTGGCACTaGAGATGGGCATCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: VTFVARAQWGPYRWPAEVARHWH*RWASST Trigger: TGTGCTGGATGCCCATCTTCAGTGCCAATGCCTGGC...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGACATATCGGCTGCTGCTaGTACCGCCGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SPFLPGGISGKEEIQVNRHIGCC*YRRRRR Trigger: GCGGCGGCGGCGGCGGTAGCAGCAGCAGCCGATATG...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR TCA 90 bp | AGCTCAGCAGCTGCTCCTCAGTATGCTCCCTCAGACCCGACCATCACTGTAAGAGCCAGGCATTGGCACTaGAGATGGGCATCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: SSAAAPQYAPSDPTITVRARHWH*RWASST Trigger: TGTGCTGGATGCCCATCTTCAGTGCCAATGCCTGGC...TCTTACAGTGATGGTCGGGTCTGAGGGAGCATACTGAGGAGCAGCTGCTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS-3UTR TCA 90 bp | GTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGAAGGGGAAGGTGGCCATaGAGCCCAGGCGAAAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: VLALKLLTVRLVPATPLRRGRWP*SPGESV Trigger: AACGCTTTCGCCTGGGCTTCATGGCCACCTTCCCCT...TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS-3UTR TCA 90 bp | GCGCGTGCGTGGTCACATGTCATTGGTGGCCATGAGAAGGTGTGTAGCTGTAGTACCAGGTGGCAGCGATaGCCTTCAAAGCATGGGACT | + |
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Preference number: 4 (lower is better) Translates to: ARAWSHVIGGHEKVCSCSTRWQR*PSKHGT Trigger: AGTCCCATGCTTTGAAGGTCATCGCTGCCACCTGGT...ACTACAGCTACACACCTTCTCATGGCCACCAATGACATGTGACCACGCACGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR GCA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTAGTAGCAGGAATGTTTaGCAGGACTGCTGCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTFVARAQWGPYRWPAEVSSRNV*QDCCIA Trigger: CGCTATGCAGCAGTCCTGGCAAACATTCCTGCTACT...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | GCGCGTGCGTGGTCACATGTCATTGGTGGCCATGAGAAGGTGTGTAGCTGTAGTTTCTGCCACCACTGCTaGTGGTTGACAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARAWSHVIGGHEKVCSCSFCHHC*WLTAAA Trigger: TGCAGCAGCTGTCAACCAGCAGCAGTGGTGGCAGAA...ACTACAGCTACACACCTTCTCATGGCCACCAATGACATGTGACCACGCACGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTGCTTCCTTGGAGGCCTaGATTTCTGCAAGTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTFVARAQWGPYRWPAEVASLEA*ISASNS Trigger: GCTGTTACTTGCAGAAATCCAGGCCTCCAAGGAAGC...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| 3UTR CAA 72 bp | CAGAGGAGGTGTGTGCGCGTGCGTGGTCACATGTCATaGGTGGCCATGAGAAGGTGTGTAGCTGTAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRCVRVRGHMS*VAMRRCVAVVC Trigger: ACATACTACAGCTACACACCTTCTCATGGCCACCAATGACATGTGACCACGCACGCGCACACACCTCCTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGACTGCATAGCGTCACTTaGCAACAGGAAGCGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLALKLLTVRLVPATPLRLHSVT*QQEAAH Trigger: ATGTGCCGCTTCCTGTTGCCAAGTGACGCTATGCAG...TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCTCTTGGCGATCAGGTTaGCAGCAGAACCACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENRAEQCVSMERRHLGRSSWRSG*QQNHCS Trigger: GGAGCAGTGGTTCTGCTGCCAACCTGATCGCCAAGA...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCCTGGTTGACAGCTGCTaGAGCTCTAGCTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENRAEQCVSMERRHLGRSLVDSC*SSSFLG Trigger: TCCAAGGAAGCTAGAGCTGCAGCAGCTGTCAACCAG...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAGATGGCTACCAGGTTaGAGGTGGAAACACTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLTRRHFWKGGNTGEQRWLPG*RWKHSR Trigger: CCGTGAGTGTTTCCACCTTCAACCTGGTAGCCATCT...CTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR TCA 90 bp | TTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAAGAAAGGGAGATGGGGGTCCCTaGGAGGTGTTTCTCGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPGGISGKEEIQVNRRKGDGGP*EVFLGR Trigger: TCTGCCGAGAAACACCTCTCAGGGACCCCCATCTCC...CTTTCTTCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR TCA 90 bp | TTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAAGAAAGAGGGGAAGGTGGCCATaGAGCCCAGGCGAAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPGGISGKEEIQVNRRKRGRWP*SPGESV Trigger: AACGCTTTCGCCTGGGCTTCATGGCCACCTTCCCCT...CTTTCTTCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGGAGCAGAAGAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTGGATCACGCGCTTCTTaGCGATCAGGTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGAEENRAEQCVSMERRGSRAS*RSGWQQ Trigger: CTGCTGCCAACCTGATCGCCAAGAAGCGCGTGATCC...ACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTCTTCTGCTCCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGACTGGTTGACAGCTGCTaGAGCTCTAGCTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPFLPGGISGKEEIQVNRLVDSC*SSSFLG Trigger: TCCAAGGAAGCTAGAGCTGCAGCAGCTGTCAACCAG...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | TCATCCTTCTGCAGCTTGACATTGCTGACAGAAAACAGTTCTAGCTACTGGCCTTTCTGCCACCACTGCTaGTGGTTGACAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFCSLTLLTENSSSYWPFCHHC*WLTAAA Trigger: TGCAGCAGCTGTCAACCAGCAGCAGTGGTGGCAGAA...AGGCCAGTAGCTAGAACTGTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| 3UTR CAA 72 bp | CTCGCTACTCCCTGTTTTCCTCTTCCACAGAAAGGTTaGAGGTCAATTGAGAGTGTAGGGCCTGGATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LATPCFPLPQKG*RSIESVGPGSV Trigger: CACTGATCCAGGCCCTACACTCTCAATTGACCTCAAACCTTTCTGTGGAAGAGGAAAACAGGGAGTAGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| 3UTR CAA 72 bp | TTTCAGTTTGAACTCTGCGTCTTGGCTCTGAAACTGTaGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQFELCVLALKL*TVRLVPATPLR Trigger: TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGACGCAGAGTTCAAACTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGGAGTACAGGAGAATCTaGACTGCAGACTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLTRRHFWKGGNTGEQEYRRI*TADCHS Trigger: AGAATGGCAGTCTGCAGTGCAGATTCTCCTGTACTC...CTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTGGATCACGCGCTTCTTaGCGATCAGGTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WPAEVSPMVNIMENVLAFGSRAS*RSGWQQ Trigger: CTGCTGCCAACCTGATCGCCAAGAAGCGCGTGATCC...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| 3UTR CAA 72 bp | CTACATCTTTGGTCCTTTCAGTTTGAACTCTGCGTCTaGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLWSFQFELCV*ALKLLTVRLVP Trigger: TGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGACGCAGAGTTCAAACTGAAAGGACCAAAGATGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTTCTTGGCGATCAGGTTaGCAGCAGAACCACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WPAEVSPMVNIMENVLAFSWRSG*QQNHCS Trigger: GGAGCAGTGGTTCTGCTGCCAACCTGATCGCCAAGA...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR TCA 90 bp | TCATCCTTCTGCAGCTTGACATTGCTGACAGAAAACAGTTCTAGCTACTGGCCTAGACTGCCATTCTTTTaGAGGCTGAGGTTGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFCSLTLLTENSSSYWPRLPFF*RLRLIQ Trigger: CTGGATCAACCTCAGCCTTCAAAAGAATGGCAGTCT...AGGCCAGTAGCTAGAACTGTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTAGATGGCTACCAGGTTaGAGGTGGAAACACTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: WPAEVSPMVNIMENVLAFRWLPG*RWKHSR Trigger: CCGTGAGTGTTTCCACCTTCAACCTGGTAGCCATCT...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR GCA 90 bp | TGGAACTTTGTGAAGGGTGAAAAGCAGACATCGGAAGAGTCCTCGTTAGAAATGAGTAGCAGGAATGTTTaGCAGGACTGCTGCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WNFVKGEKQTSEESSLEMSSRNV*QDCCIA Trigger: CGCTATGCAGCAGTCCTGGCAAACATTCCTGCTACT...CATTTCTAACGAGGACTCTTCCGATGTCTGCTTTTCACCCTTCACAAAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTCTGCATAGCGTCACTTaGCAACAGGAAGCGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WPAEVSPMVNIMENVLAFLHSVT*QQEAAH Trigger: ATGTGCCGCTTCCTGTTGCCAAGTGACGCTATGCAG...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CCA 90 bp | GTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGACACATGTTCGCCGTCTaGTTATTGTTTTTAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLALKLLTVRLVPATPLRHMFAV*LLFLVK Trigger: TTTTACTAAAAACAATAACCAGACGGCGAACATGTG...TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS-3UTR TCA 90 bp | AAGCTCACACAATACTCCAACTTTTATGGAAGAATGATAACACTTGTTGAGTTCACCAGGTGGCAGCGATaGCCTTCAAAGCATGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLTQYSNFYGRMITLVEFTRWQR*PSKHGT Trigger: AGTCCCATGCTTTGAAGGTCATCGCTGCCACCTGGT...GAACTCAACAAGTGTTATCATTCTTCCATAAAAGTTGGAGTATTGTGTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTCACATGTTCGCCGTCTaGTTATTGTTTTTAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WPAEVSPMVNIMENVLAFHMFAV*LLFLVK Trigger: TTTTACTAAAAACAATAACCAGACGGCGAACATGTG...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS TCA 90 bp | GGAGGAGGTGTAGGAGAGGAGGAGGATGAAGGAGATGGGGGTCCCTaGGAGGTGTTTCTCGGCAGAAACCGTGTCATATGCCCGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGVGEEEDEGDGGP*EVFLGRNRVICPPG Trigger: GCCTGGCGGGCATATGACACGGTTTCTGCCGAGAAACACCTCTCAGGGACCCCCATCTCCTTCATCCTCCTCCTCTCCTACACCTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTCACCACTGCTGCTGGTaGACAGCTGCTGCAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VTFVARAQWGPYRWPAEVHHCCW*TAAAAL Trigger: TAGAGCTGCAGCAGCTGTCAACCAGCAGCAGTGGTG...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS GCA 90 bp | AGGCACCAGGTGGCAGCGATGACCTTCAAAGCATGGGACTTTGTTTaGCAGACGCGGGATTGTAGGGGTCTGCAGATGGCACCGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHQVAAMTFKAWDFV*QTRDCRGLQMAPYL Trigger: GAGATACGGTGCCATCTGCAGACCCCTACAATCCCGCGTCTGGCAAACAAAGTCCCATGCTTTGAAGGTCATCGCTGCCACCTGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CCA 90 bp | ATGGTAAAGGAGAGGCACCAGGTGGCAGCGATGACCTTCAAAGCATaGGACTTTGTTTGCCAGACGCGGGATTGTAGGGGTCTGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: MVKERHQVAAMTFKA*DFVCQTRDCRGLQM Trigger: CATCTGCAGACCCCTACAATCCCGCGTCTGGCAAACAAAGTCCCATGCTTTGAAGGTCATCGCTGCCACCTGGTGCCTCTCCTTTACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | GTGACATTTGTAGCACGAGCCCAGTGGGGTCCCTATCGCTGGCCTGCTGAGGTTCAGACTGCCATTCTTTaGAAGGCTGAGGTTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTFVARAQWGPYRWPAEVQTAIL*KAEVDP Trigger: TGGATCAACCTCAGCCTTCAAAAGAATGGCAGTCTG...AACCTCAGCAGGCCAGCGATAGGGACCCCACTGGGCTCGTGCTACAAATGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
||
| CDS-3UTR CAA 90 bp | GCGCGTGCGTGGTCACATGTCATTGGTGGCCATGAGAAGGTGTGTAGCTGTAGTAAATCCTTGAGCAGGTaGGGGATGAGGTTGAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARAWSHVIGGHEKVCSCSKSLSR*GMRLNG Trigger: GCCGTTCAACCTCATCCCCAACCTGCTCAAGGATTT...ACTACAGCTACACACCTTCTCATGGCCACCAATGACATGTGACCACGCACGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | GTCTTGGCTCTGAAACTGTTGACAGTGAGGCTGGTGCCAGCCACTCCTCTAAGACCGAAGATGAAATCCTaGAGCAGGTTGGGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLALKLLTVRLVPATPLRPKMKS*SRLGMR Trigger: CCTCATCCCCAACCTGCTCAAGGATTTCATCTTCGG...TCTTAGAGGAGTGGCTGGCACCAGCCTCACTGTCAACAGTTTCAGAGCCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | GCGCGTGCGTGGTCACATGTCATTGGTGGCCATGAGAAGGTGTGTAGCTGTAGTTCAAAGCATGGGACTTaGTTTGCCAGACGCGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ARAWSHVIGGHEKVCSCSSKHGT*FARRGI Trigger: AATCCCGCGTCTGGCAAACAAAGTCCCATGCTTTGA...ACTACAGCTACACACCTTCTCATGGCCACCAATGACATGTGACCACGCACGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCAGCTGCTCCTCAGTATGCTCCCTCAGACCCGACCATCACTGTAAGATCAAAGCATGGGACTTaGTTTGCCAGACGCGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SSAAAPQYAPSDPTITVRSKHGT*FARRGI Trigger: AATCCCGCGTCTGGCAAACAAAGTCCCATGCTTTGA...TCTTACAGTGATGGTCGGGTCTGAGGGAGCATACTGAGGAGCAGCTGCTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGTATGCCCGCCAGGCATaGGCACTGAAGATGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLTRRHFWKGGNTGEQYARQA*ALKMGI Trigger: GATGCCCATCTTCAGTGCCAATGCCTGGCGGGCATA...CTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAGGTGTGTAGCTGTAGTATGTGTGAGAAGTAGGCATGGGGAGGACCAGGCAGCTCTAGCTTCCTaGGAGGCCTGGATTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRRCVAVVCVRSRHGEDQAALAS*EAWISA Trigger: TGCAGAAATCCAGGCCTCCAAGGAAGCTAGAGCTGC...CTGGTCCTCCCCATGCCTACTTCTCACACATACTACAGCTACACACCTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAGACAGCAGGAAGATGTaGGTGACAGTCCGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPFLPGGISGKEEIQVNRDSRKM*VTVRIL Trigger: GAGGATGCGGACTGTCACCAACATCTTCCTGCTGTC...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGAGCAGAAGAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTTATGCCCGCCAGGCATaGGCACTGAAGATGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSGAEENRAEQCVSMERRYARQA*ALKMGI Trigger: GATGCCCATCTTCAGTGCCAATGCCTGGCGGGCATA...ACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTCTTCTGCTCCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | TGGAACTTTGTGAAGGGTGAAAAGCAGACATCGGAAGAGTCCTCGTTAGAAATGCTGCTCCTGATCCGGTaGATTCTGCCACCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WNFVKGEKQTSEESSLEMLLLIR*ILPPLL Trigger: CAGCAGTGGTGGCAGAATCAACCGGATCAGGAGCAG...CATTTCTAACGAGGACTCTTCCGATGTCTGCTTTTCACCCTTCACAAAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | TCATCCTTCTGCAGCTTGACATTGCTGACAGAAAACAGTTCTAGCTACTGGCCTACAGTCCGCATCCTCTaGTTTCGAATCAGCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFCSLTLLTENSSSYWPTVRIL*FRISTV Trigger: CACGGTGCTGATTCGAAACAAGAGGATGCGGACTGT...AGGCCAGTAGCTAGAACTGTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGCTGTAGTATGTGTGAGAAGTAGGCATGGGGAGGACCAGAATTCTTCACCGAAGATGAAATCCTaGAGCAGGTTGGGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVAVVCVRSRHGEDQNSSPKMKS*SRLGMR Trigger: CCTCATCCCCAACCTGCTCAAGGATTTCATCTTCGG...TGAAGAATTCTGGTCCTCCCCATGCCTACTTCTCACACATACTACAGCTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | TCATCCTTCTGCAGCTTGACATTGCTGACAGAAAACAGTTCTAGCTACTGGCCTGAGATGGCTACCAGGTaGAAGGTGGAAACACTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSFCSLTLLTENSSSYWPEMATR*KVETLT Trigger: CGTGAGTGTTTCCACCTTCAACCTGGTAGCCATCTC...AGGCCAGTAGCTAGAACTGTTTTCTGTCAGCAATGTCAAGCTGCAGAAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | TTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAAGAAAGAAATCCTTGAGCAGGTaGGGGATGAGGTTGAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLPGGISGKEEIQVNRRKKSLSR*GMRLNG Trigger: GCCGTTCAACCTCATCCCCAACCTGCTCAAGGATTT...CTTTCTTCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
||
| CDS-3UTR CAA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCTTCGCCGTCTGGTTATaGTTTTTAGTAAAAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: ENRAEQCVSMERRHLGRSFAVWL*FLVKGT Trigger: GGTGCCTTTTACTAAAAACAATAACCAGACGGCGAA...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCTGAGGTTTCTCCCATGGTAAACATTATGGAAAATGTCTTAGCGTTTGAGATGGCTACCAGGTaGAAGGTGGAAACACTCACG | + |
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Preference number: 5 (lower is better) Translates to: WPAEVSPMVNIMENVLAFEMATR*KVETLT Trigger: CGTGAGTGTTTCCACCTTCAACCTGGTAGCCATCTC...AAACGCTAAGACATTTTCCATAATGTTTACCATGGGAGAAACCTCAGCAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | GAAAACAGAGCAGAGCAGTGTGTTAGTATGGAGAGACGTCATCTGGGGCGTTCCATCAAATTTGATTCCTaGGTAGAGTTCCAGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: ENRAEQCVSMERRHLGRSIKFDS*VEFQRD Trigger: ATCTCTCTGGAACTCTACCAAGGAATCAAATTTGAT...GGAACGCCCCAGATGACGTCTCTCCATACTAACACACTGCTCTGCTCTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | CCCGGTCTTTATTTTAGGCAGGAAAGGTATGTAAGATCTATTCAAGTATCAAAGCACCACTGCTGCTGGTaGACAGCTGCTGCAGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: PGLYFRQERYVRSIQVSKHHCCW*TAAAAL Trigger: TAGAGCTGCAGCAGCTGTCAACCAGCAGCAGTGGTG...CTTTGATACTTGAATAGATCTTACATACCTTTCCTGCCTAAAATAAAGACCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | TCTCCCTTCTTACCCGGAGGCATTTCTGGAAAGGAGGAAATACAGGTGAACAGAATCAAATTTGATTCCTaGGTAGAGTTCCAGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: SPFLPGGISGKEEIQVNRIKFDS*VEFQRD Trigger: ATCTCTCTGGAACTCTACCAAGGAATCAAATTTGAT...TCTGTTCACCTGTATTTCCTCCTTTCCAGAAATGCCTCCGGGTAAGAAGGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS-3UTR CAA 90 bp | CCCGGTCTTTATTTTAGGCAGGAAAGGTATGTAAGATCTATTCAAGTATCAAAGTTCGCCGTCTGGTTATaGTTTTTAGTAAAAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PGLYFRQERYVRSIQVSKFAVWL*FLVKGT Trigger: GGTGCCTTTTACTAAAAACAATAACCAGACGGCGAA...CTTTGATACTTGAATAGATCTTACATACCTTTCCTGCCTAAAATAAAGACCGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200691.4 |
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| CDS CAA 90 bp | TTCTTGGCGATCAGGTTGGCAGCAGAACCACTGCTCCTGATCCGGTaGATTCTGCCACCACTGCTGCTGGTTGACAGCTGCTGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FLAIRLAAEPLLLIR*ILPPLLLVDSCCSS Trigger: AGAGCTGCAGCAGCTGTCAACCAGCAGCAGTGGTGGCAGAATCAACCGGATCAGGAGCAGTGGTTCTGCTGCCAACCTGATCGCCAAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS GCA 72 bp | CGGTTGATTCTGCCACCACTGCTGCTGGTTGACAGCTaGTGCAGCTCTAGCTTCCTTGGAGGCCTGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: RLILPPLLLVDS*CSSSFLGGLDF Trigger: GAAATCCAGGCCTCCAAGGAAGCTAGAGCTGCAGCAGCTGTCAACCAGCAGCAGTGGTGGCAGAATCAACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CCA 72 bp | GAGAGGCACCAGGTGGCAGCGATGACCTTCAAAGCATaGGACTTTGTTTGCCAGACGCGGGATTGTAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ERHQVAAMTFKA*DFVCQTRDCRG Trigger: ACCCCTACAATCCCGCGTCTGGCAAACAAAGTCCCATGCTTTGAAGGTCATCGCTGCCACCTGGTGCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | ATCAGGTTGGCAGCAGAACCACTGCTCCTGATCCGGTaGATTCTGCCACCACTGCTGCTGGTTGACAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IRLAAEPLLLIR*ILPPLLLVDSC Trigger: GCAGCTGTCAACCAGCAGCAGTGGTGGCAGAATCAACCGGATCAGGAGCAGTGGTTCTGCTGCCAACCTGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 90 bp | GAGAGGTGTTTCTCGGCAGAAACCGTGTCATATGCCCGCCAGGCATaGGCACTGAAGATGGGCATCCAGCACAGGAAGAAGAGGACCACA | + |
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Preference number: 6 (lower is better) Translates to: ERCFSAETVSYARQA*ALKMGIQHRKKRTT Trigger: TGTGGTCCTCTTCTTCCTGTGCTGGATGCCCATCTTCAGTGCCAATGCCTGGCGGGCATATGACACGGTTTCTGCCGAGAAACACCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS TCA 72 bp | CAGAAACCGTGTCATATGCCCGCCAGGCATTGGCACTaGAGATGGGCATCCAGCACAGGAAGAAGAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: QKPCHMPARHWH*RWASSTGRRGP Trigger: TGGTCCTCTTCTTCCTGTGCTGGATGCCCATCTTCAGTGCCAATGCCTGGCGGGCATATGACACGGTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS GCA 72 bp | TTGATTCTGCCACCACTGCTGCTGGTTGACAGCTGCTaGAGCTCTAGCTTCCTTGGAGGCCTGGATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LILPPLLLVDSC*SSSFLGGLDFC Trigger: GCAGAAATCCAGGCCTCCAAGGAAGCTAGAGCTGCAGCAGCTGTCAACCAGCAGCAGTGGTGGCAGAATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CCA 72 bp | TTGTTTGCCAGACGCGGGATTGTAGGGGTCTGCAGATaGCACCGTATCTCTCCAGAGAGATGGCTACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LFARRGIVGVCR*HRISPERWLPG Trigger: ACCTGGTAGCCATCTCTCTGGAGAGATACGGTGCCATCTGCAGACCCCTACAATCCCGCGTCTGGCAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | TGCTGCTGGTTGACAGCTGCTGCAGCTCTAGCTTCCTaGGAGGCCTGGATTTCTGCAAGTAACAGCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: CCWLTAAAALAS*EAWISASNSHR Trigger: GCGATGGCTGTTACTTGCAGAAATCCAGGCCTCCAAGGAAGCTAGAGCTGCAGCAGCTGTCAACCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | TTCTCGGCAGAAACCGTGTCATATGCCCGCCAGGCATaGGCACTGAAGATGGGCATCCAGCACAGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FSAETVSYARQA*ALKMGIQHRKK Trigger: CTTCTTCCTGTGCTGGATGCCCATCTTCAGTGCCAATGCCTGGCGGGCATATGACACGGTTTCTGCCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 90 bp | AAGAAGAGGACCACAATGACAATGAGCATGCGGATCACGCGCTTCTaGGCGATCAGGTTGGCAGCAGAACCACTGCTCCTGATCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KKRTTMTMSMRITRF*AIRLAAEPLLLIRL Trigger: CAACCGGATCAGGAGCAGTGGTTCTGCTGCCAACCTGATCGCCAAGAAGCGCGTGATCCGCATGCTCATTGTCATTGTGGTCCTCTTCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS GCA 72 bp | AGGAAGAGGATGAGTAGCAGGAATGTTTGCCAGGACTaGTGCATAGCGTCACTTGGCAACAGGAAGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RKRMSSRNVCQD*CIASLGNRKRH Trigger: GTGCCGCTTCCTGTTGCCAAGTGACGCTATGCAGCAGTCCTGGCAAACATTCCTGCTACTCATCCTCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | ATGGCACCGTATCTCTCCAGAGAGATGGCTACCAGGTaGAAGGTGGAAACACTCACGGAAGTGCCCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: MAPYLSREMATR*KVETLTEVPMK Trigger: CTTCATGGGCACTTCCGTGAGTGTTTCCACCTTCAACCTGGTAGCCATCTCTCTGGAGAGATACGGTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | GACAGCAGGAAGATGTTGGTGACAGTCCGCATCCTCTaGTTTCGAATCAGCACCGTGATAACCAGCGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: DSRKMLVTVRIL*FRISTVITSVF Trigger: GAACACGCTGGTTATCACGGTGCTGATTCGAAACAAGAGGATGCGGACTGTCACCAACATCTTCCTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
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| CDS TCA 72 bp | GTACAGGAGAATCTGCACTGCAGACTGCCATTCTTTTaGAGGCTGAGGTTGATCCAGGCAGAAAAGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VQENLHCRLPFF*RLRLIQAEKRL Trigger: GAGACGCTTTTCTGCCTGGATCAACCTCAGCCTTCAAAAGAATGGCAGTCTGCAGTGCAGATTCTCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031093.5 |
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| CDS CCA 72 bp | TCACTTGGCAACAGGAAGCGGCACATGTTCGCCGTCTaGTTATTGTTTTTAGTAAAAGGCACCAAGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLGNRKRHMFAV*LLFLVKGTKLL Trigger: CAGCAACTTGGTGCCTTTTACTAAAAACAATAACCAGACGGCGAACATGTGCCGCTTCCTGTTGCCAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 90 bp | CTTCTCTTTAGCAGATTTCTTCTGGCTGGCATCAAATTTGATTCCTaGGTAGAGTTCCAGAGAGATGAGTCCGTAAGCCACCACCATCAC | + |
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Preference number: 6 (lower is better) Translates to: LLFSRFLLAGIKFDS*VEFQRDESVSHHHH Trigger: GTGATGGTGGTGGCTTACGGACTCATCTCTCTGGAACTCTACCAAGGAATCAAATTTGATGCCAGCCAGAAGAAATCTGCTAAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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| CDS CAA 72 bp | AGCAGATTTCTTCTGGCTGGCATCAAATTTGATTCCTaGGTAGAGTTCCAGAGAGATGAGTCCGTAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SRFLLAGIKFDS*VEFQRDESVSH Trigger: GTGGCTTACGGACTCATCTCTCTGGAACTCTACCAAGGAATCAAATTTGATGCCAGCCAGAAGAAATCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031093.5 ENSMUST00000200691.4 |
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