Pregenerated sensors for CCER2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096257Ensembl transcript IDs: ENSMUST00000178767.3
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTaGAAGGAGGCTCTGAGGTCAACAGTCCTGAGCCTCAGGGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LASSPYQLEVEQNAR*KEALRSTVLSLREC Trigger: ACACTCCCTGAGGCTCAGGACTGTTGACCTCAGAGCCTCCTTTCACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGAGCCTCAGGGAGTGTaGGGAAGGAGTGGCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLCALFTQGWRGGRGPESEPQGV*GRSGVG Trigger: CCCCACGCCACTCCTTCCCCACACTCCCTGAGGCTC...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| 3UTR CAA 90 bp | CCCCTGCCCATAGGCTTCTCTCAGGCTTGGTTCTCAGGCACATCCTaGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGT | + |
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Preference number: 2 (lower is better) Translates to: PLPIGFSQAWFSGTS*LPVPTSWKWSRMPG Trigger: ACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAAGCCTGAGAGAAGCCTATGGGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| 3UTR TCA 72 bp | AGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTaGAAGGAGGCTCTGAGGTCAACAGTCCTGAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SPYQLEVEQNAR*KEALRSTVLSL Trigger: GAGGCTCAGGACTGTTGACCTCAGAGCCTCCTTTCACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | TTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGCCGGAGCCCAGCCCTCTGCCTCTTCCTCTTaGTTAGCCTTGGTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FTQGWRGGRGPESAGAQPSASSS*LALVPG Trigger: GCCTGGCACCAAGGCTAAGCAAGAGGAAGAGGCAGA...GGGCTGGGCTCCGGCTGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGCCGGAGCCCAGCCCGGGTTAGCTCCTCCTTaGAGGGTCTGGGCATCAATG | + |
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Preference number: 4 (lower is better) Translates to: FTQGWRGGRGPESAGAQPGLAPP*RVWASM Trigger: CATTGATGCCCAGACCCTCCAAGGAGGAGCTAACCC...GGGCTGGGCTCCGGCTGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | TTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGCCGGAGCCCAGCCCAGGTCTTCCCCGGCATaGTCTTCTCCTCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FTQGWRGGRGPESAGAQPRSSPA*SSPLLP Trigger: AGGAAGAAGAGGAGAAGAGCATGCCGGGGAAGACCT...GGGCTGGGCTCCGGCTGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR TCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGGGCATCAATGGAGCTaGAGAGGCAGCCCCGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLCALFTQGWRGGRGPESGHQWS*RGSPEQ Trigger: CTGCTCGGGGCTGCCTCTTCAGCTCCATTGATGCCC...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | TCAGGCTTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGCCTCCGCCCAGGAGCTaGATGCCCTTTCCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGLVLRHILASSPYQLEVPPPRS*MPFPSS Trigger: GGAGGAGGGAAAGGGCATGCAGCTCCTGGGCGGAGG...CACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAAGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | GCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGCCAGGCTGCTCCAGGTaGTGGCTATGCTTCGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AHPCFQSLPVGSGAECPVPGCSR*WLCFED Trigger: GTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGG...CACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | GCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGTGGACTGCCTGTTCCTaGACCCCAGACTTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AHPCFQSLPVGSGAECPVWTACS*TPDLWV Trigger: GACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCA...CACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGAAAGGATCAGCCACCCGCTTCTaGAGGCCTCCCTCTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PCFQSLPVGSGAECPVKGSATRF*RPPSGC Trigger: ACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGA...TCCTTTCACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR TCA 90 bp | GCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGTCTTCTTCCTCCTGGTaGAGCTGGCTGTGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AHPCFQSLPVGSGAECPVSSSSW*SWLWSF Trigger: GAAGCTCCACAGCCAGCTTCACCAGGAGGAAGAAGA...CACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR TCA 90 bp | TCAGGCTTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGCCCTTTCCCTCCTCCTaGAACTGGGCCGTCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGLVLRHILASSPYQLEVPFPSS*NWAVSS Trigger: TGAGGAGACGGCCCAGTTTCAGGAGGAGGGAAAGGG...CACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAAGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | GCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGCCTCCTTGGAGGGTCTaGGCATCAATGGAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AHPCFQSLPVGSGAECPVPPWRV*ASMELK Trigger: CTTCAGCTCCATTGATGCCCAGACCCTCCAAGGAGG...CACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCATGCACCCCAGACTTGTaGGTCCTCTCTGCTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLCALFTQGWRGGRGPESCTPDL*VLSASS Trigger: GGACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCA...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCACTGTGGAGCTTCGTGTaGACTGCCTGTTCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: LLCALFTQGWRGGRGPESLWSFV*TACSCT Trigger: GGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAG...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | CTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGCCATCTTTCCAGACTCCTaGTGGTTGAAGTCCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: LCALFTQGWRGGRGPESAIFPDS*WLKSSP Trigger: GGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGAT...GGCTGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCACTTGTGGGTCCTCTCTaGTTCGTCCTCCTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLCALFTQGWRGGRGPESLVGPL*FVLLFL Trigger: GAGGAAGAGGAGGACGAAGCAGAGAGGACCCACAAG...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCAGCCGGATCATCCCTTATCTCCTaGCTGGACCTCATCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CALFTQGWRGGRGPESAGSSLIS*LDLIFP Trigger: TGGAAAGATGAGGTCCAGCCAGGAGATAAGGGATGA...TCCGGCTGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTGCTTTGTGCTTTATTCACTCAGGGATGGAGGGGTGGGCGGGGTCCTGAGTCACTGGAGGCCTCCCTCTaGATGTTGCTTCCACACATG | + |
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Preference number: 4 (lower is better) Translates to: LLCALFTQGWRGGRGPESLEASL*MLLPHM Trigger: CATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAG...TGACTCAGGACCCCGCCCACCCCTCCATCCCTGAGTGAATAAAGCACAAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | TTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGTTAACTGCTCCTGCATaGGCTCCAGCCGCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LVLRHILASSPYQLEVEQLTAPA*APAAPH Trigger: ATGTGGAGCGGCTGGAGCGCATGCAGGAGCAGTTAA...CTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| 3UTR CAA 72 bp | ATAGGCTTCTCTCAGGCTTGGTTCTCAGGCACATCCTaGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IGFSQAWFSGTS*LPVPTSWKWSR Trigger: TCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAAGCCTGAGAGAAGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR GCA 90 bp | GTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATCCTCCCTCTGGATGTTaGTTCCACACATGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLRHILASSPYQLEVEQNPPSGC*FHTCSE Trigger: CTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGG...ATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | GGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAAGGGGACACACAGCTATaGGGCTCTGTCTCAAATATC | + |
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Preference number: 4 (lower is better) Translates to: GSQAHPCFQSLPVGSGAEGDTQL*GSVSNI Trigger: GATATTTGAGACAGAGCCCCATAGCTGTGTGTCCCC...TTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGCCCTTATCTCCTGGCTaGACCTCATCTTTCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: LVLRHILASSPYQLEVEQPLSPG*TSSFQT Trigger: AGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGG...CTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CCA 90 bp | TTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGTCAAATATCTCTTTGTaGAGCAGAGCTGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LVLRHILASSPYQLEVEQSNISL*SRAVQG Trigger: CCCCTGCACAGCTCTGCTCCACAAAGAGATATTTGA...CTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 90 bp | TTCGAGGACTCTTCACGCCTCTCTCCTCCGACCCTCCCGGCCCCCTaGCACAGATTTCGGCCTCCGCCCAGGAGCTGCATGCCCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FEDSSRLSPPTLPAP*HRFRPPPRSCMPFP Trigger: GGGAAAGGGCATGCAGCTCCTGGGCGGAGGCCGAAATCTGTGGCAGGGGGCCGGGAGGGTCGGAGGAGAGAGGCGTGAAGAGTCCTCGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS TCA 90 bp | AGATTTCGGCCTCCGCCCAGGAGCTGCATGCCCTTTCCCTCCTCCTaGAACTGGGCCGTCTCCTCATCGCTAGCCTTCTCAGCCACCCGC | + |
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Preference number: 5 (lower is better) Translates to: RFRPPPRSCMPFPSS*NWAVSSSLAFSATR Trigger: GCGGGTGGCTGAGAAGGCTAGCGATGAGGAGACGGCCCAGTTTCAGGAGGAGGGAAAGGGCATGCAGCTCCTGGGCGGAGGCCGAAATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | GCCTCTTCCTCTTGCTTAGCCTTGGTGCCAGGCTGCTCCAGGTGGTaGCTATGCTTCGAGGACTCTTCACGCCTCTCTCCTCCGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: ASSSCLALVPGCSRW*LCFEDSSRLSPPTL Trigger: GAGGGTCGGAGGAGAGAGGCGTGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAAGCAAGAGGAAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 90 bp | CTAGCCTTCTCAGCCACCCGCTTCTGGAGGCCTCCCTCTGGATGTTaGTTCCACACATGCTCAGAGGTCTTCCCCGGCATGCTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LAFSATRFWRPPSGC*FHTCSEVFPGMLFS Trigger: GGAGAAGAGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | CTCATCGCTAGCCTTCTCAGCCACCCGCTTCTGGAGGCCTCCCTCTaGATGTTGCTTCCACACATGCTCAGAGGTCTTCCCCGGCATGCT | + |
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Preference number: 5 (lower is better) Translates to: LIASLLSHPLLEASL*MLLPHMLRGLPRHA Trigger: AGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAGCGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | AACTGGGCCGTCTCCTCATCGCTAGCCTTCTCAGCCACCCGCTTCTaGAGGCCTCCCTCTGGATGTTGCTTCCACACATGCTCAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: NWAVSSSLAFSATRF*RPPSGCCFHTCSEV Trigger: GACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAGCGATGAGGAGACGGCCCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | TCTGCCTCTTCCTCTTGCTTAGCCTTGGTGCCAGGCTGCTCCAGGTaGTGGCTATGCTTCGAGGACTCTTCACGCCTCTCTCCTCCGACC | + |
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Preference number: 5 (lower is better) Translates to: SASSSCLALVPGCSR*WLCFEDSSRLSPPT Trigger: GGTCGGAGGAGAGAGGCGTGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAAGCAAGAGGAAGAGGCAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 90 bp | CTCTTCTTCCTCCTGGTGAAGCTGGCTGTGGAGCTTCGTGTGGACTaGCTGTTCCTGCACCCCAGACTTGTGGGTCCTCTCTGCTTCGTC | + |
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Preference number: 5 (lower is better) Translates to: LFFLLVKLAVELRVD*LFLHPRLVGPLCFV Trigger: GACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCAGCTTCACCAGGAGGAAGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 90 bp | GCCACCCGCTTCTGGAGGCCTCCCTCTGGATGTTGCTTCCACACATaGTCAGAGGTCTTCCCCGGCATGCTCTTCTCCTCTTCTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ATRFWRPPSGCCFHT*SEVFPGMLFSSSSF Trigger: AAAGGAAGAAGAGGAGAAGAGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | CTGTGGAGCTTCGTGTGGACTGCCTGTTCCTGCACCCCAGACTTGTaGGTCCTCTCTGCTTCGTCCTCCTCTTCCTCATCCCTTATCTCC | + |
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Preference number: 5 (lower is better) Translates to: LWSFVWTACSCTPDL*VLSASSSSSSSLIS Trigger: GGAGATAAGGGATGAGGAAGAGGAGGACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CAA 90 bp | GCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATGCCCGGTGCTCTGCCTCTTCCTCTaGCTTAGCCTTGGTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AHPCFQSLPVGSGAECPVLCLFL*LSLGAR Trigger: CCTGGCACCAAGGCTAAGCAAGAGGAAGAGGCAGAG...CACCGGGCATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CAA 90 bp | TCAGGCTTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGTCCTGCACCCCAGACTaGTGGGTCCTCTCTGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: SGLVLRHILASSPYQLEVSCTPD*WVLSAS Trigger: CGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGA...CACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAAGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS TCA 90 bp | CCCTTATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTGCTGGTTaGAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGGACACACAGC | + |
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Preference number: 5 (lower is better) Translates to: PLSPGWTSSFQTPAG*SPHPATSSPQGTHS Trigger: GCTGTGTGTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS TCA 90 bp | ATGCTCTTCTCCTCTTCTTCCTTTTCCTCCTCTTCTTCCTCCTGGTaGAGCTGGCTGTGGAGCTTCGTGTGGACTGCCTGTTCCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: MLFSSSSFSSSSSSW*SWLWSFVWTACSCT Trigger: GGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCAGCTTCACCAGGAGGAAGAAGAGGAGGAAAAGGAAGAAGAGGAGAAGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 90 bp | TCCTCATCCCTTATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTaGTGGTTGAAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SSSLISWLDLIFPDS*WLKSSPSNFFSSGD Trigger: GTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGGATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CAA 90 bp | GTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGAATCGGGTTAGCTCCTCCTaGGAGGGTCTGGGCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: VLRHILASSPYQLEVEQNRVSSS*EGLGIN Trigger: ATTGATGCCCAGACCCTCCAAGGAGGAGCTAACCCG...ATTCTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS-3UTR CAA 90 bp | TTGGTTCTCAGGCACATCCTTGCTTCCAGTCCCTACCAGTTGGAAGTGGAGCAGGCCTCCCTCTGGATGTaGCTTCCACACATGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LVLRHILASSPYQLEVEQASLWM*LPHMLR Trigger: TCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGC...CTGCTCCACTTCCAACTGGTAGGGACTGGAAGCAAGGATGTGCCTGAGAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | TCATCCCTTATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTGCTaGTTGAAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGGACACA | + |
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Preference number: 5 (lower is better) Translates to: SSLISWLDLIFPDSC*LKSSPSNFFSSGDT Trigger: TGTGTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 90 bp | AAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGGACACACAGCTATaGGGCTCTGTCTCAAATATCTCTTTGTGGAGCAGAGCTGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: KSSPSNFFSSGDTQL*GSVSNISLWSRAVQ Trigger: CTGCACAGCTCTGCTCCACAAAGAGATATTTGAGACAGAGCCCCATAGCTGTGTGTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | TCTTCACGCCTCTCTCCTCCGACCCTCCCGGCCCCCTaGCACAGATTTCGGCCTCCGCCCAGGAGCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: SSRLSPPTLPAP*HRFRPPPRSCM Trigger: CATGCAGCTCCTGGGCGGAGGCCGAAATCTGTGGCAGGGGGCCGGGAGGGTCGGAGGAGAGAGGCGTGAAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | CCTGCCACAGATTTCGGCCTCCGCCCAGGAGCTGCATaGCCTTTCCCTCCTCCTGAAACTGGGCCGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PATDFGLRPGAA*PFPPPETGPSP Trigger: AGGAGACGGCCCAGTTTCAGGAGGAGGGAAAGGGCATGCAGCTCCTGGGCGGAGGCCGAAATCTGTGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 90 bp | AGCACCTCCATGACCACCTCTGCTAGACAGCGGGTTAGCTCCTCCTaGGAGGGTCTGGGCATCAATGGAGCTGAAGAGGCAGCCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: STSMTTSARQRVSSS*EGLGINGAEEAAPS Trigger: GCTCGGGGCTGCCTCTTCAGCTCCATTGATGCCCAGACCCTCCAAGGAGGAGCTAACCCGCTGTCTAGCAGAGGTGGTCATGGAGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | AGCTGGCTGTGGAGCTTCGTGTGGACTGCCTGTTCCTaGACCCCAGACTTGTGGGTCCTCTCTGCTTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SWLWSFVWTACS*TPDLWVLSASS Trigger: GGACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | CTCCTGGTGAAGCTGGCTGTGGAGCTTCGTGTGGACTaGCTGTTCCTGCACCCCAGACTTGTGGGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLVKLAVELRVD*LFLHPRLVGPL Trigger: GAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCAGCTTCACCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | TTAGCCTTGGTGCCAGGCTGCTCCAGGTGGTGGCTATaGTTCGAGGACTCTTCACGCCTCTCTCCTCCGACC | + |
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Preference number: 6 (lower is better) Translates to: LALVPGCSRWWL*FEDSSRLSPPT Trigger: GGTCGGAGGAGAGAGGCGTGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 72 bp | CTCAGCCACCCGCTTCTGGAGGCCTCCCTCTGGATGTaGCTTCCACACATGCTCAGAGGTCTTCCCCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSHPLLEASLWM*LPHMLRGLPRH Trigger: ATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 90 bp | GCTAGCCTTCTCAGCCACCCGCTTCTGGAGGCCTCCCTCTGGATGTaGCTTCCACACATGCTCAGAGGTCTTCCCCGGCATGCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ASLLSHPLLEASLWM*LPHMLRGLPRHALL Trigger: GAGAAGAGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | AGAGCCTCCCCTAGCATGGCGGTAGCCTTCTTTAACTaGTCCTGCATGCGCTCCAGCCGCTCCACATCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RASPSMAVAFFN*SCMRSSRSTSC Trigger: ACACGATGTGGAGCGGCTGGAGCGCATGCAGGAGCAGTTAAAGAAGGCTACCGCCATGCTAGGGGAGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 72 bp | AGCCTTCTCAGCCACCCGCTTCTGGAGGCCTCCCTCTaGATGTTGCTTCCACACATGCTCAGAGGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLLSHPLLEASL*MLLPHMLRGLP Trigger: GGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 72 bp | GTCTCCTCATCGCTAGCCTTCTCAGCCACCCGCTTCTaGAGGCCTCCCTCTGGATGTTGCTTCCACACATGC | + |
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Preference number: 6 (lower is better) Translates to: VSSSLAFSATRF*RPPSGCCFHTC Trigger: GCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAGCGATGAGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 90 bp | TGGCTGTGGAGCTTCGTGTGGACTGCCTGTTCCTGCACCCCAGACTaGTGGGTCCTCTCTGCTTCGTCCTCCTCTTCCTCATCCCTTATC | + |
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Preference number: 6 (lower is better) Translates to: WLWSFVWTACSCTPD*WVLSASSSSSSSLI Trigger: GATAAGGGATGAGGAAGAGGAGGACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 72 bp | TCTTGCTTAGCCTTGGTGCCAGGCTGCTCCAGGTGGTaGCTATGCTTCGAGGACTCTTCACGCCTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCLALVPGCSRW*LCFEDSSRLSP Trigger: AGGAGAGAGGCGTGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAAGCAAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 72 bp | AGCTTCGTGTGGACTGCCTGTTCCTGCACCCCAGACTaGTGGGTCCTCTCTGCTTCGTCCTCCTCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SFVWTACSCTPD*WVLSASSSSSS Trigger: TGAGGAAGAGGAGGACGAAGCAGAGAGGACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS TCA 72 bp | CCTGGCTGGACCTCATCTTTCCAGACTCCTGCTGGTTaGAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PGWTSSFQTPAG*SPHPATSSPQG Trigger: CCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | TTCTGGAGGCCTCCCTCTGGATGTTGCTTCCACACATaGTCAGAGGTCTTCCCCGGCATGCTCTTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: FWRPPSGCCFHT*SEVFPGMLFSS Trigger: AGAGGAGAAGAGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAACATCCAGAGGGAGGCCTCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | TCTGCCTCTTCCTCTTGCTTAGCCTTGGTGCCAGGCTaGTCCAGGTGGTGGCTATGCTTCGAGGACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SASSSCLALVPG*SRWWLCFEDSS Trigger: TGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAAGCAAGAGGAAGAGGCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 72 bp | ATGACCACCTCTGCTAGACAGCGGGTTAGCTCCTCCTaGGAGGGTCTGGGCATCAATGGAGCTGAAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: MTTSARQRVSSS*EGLGINGAEEA Trigger: TGCCTCTTCAGCTCCATTGATGCCCAGACCCTCCAAGGAGGAGCTAACCCGCTGTCTAGCAGAGGTGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 72 bp | TCCTGGCTGGACCTCATCTTTCCAGACTCCTGCTGGTaGAAGTCCTCACCCAGCAACTTCTTCTCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SWLDLIFPDSCW*KSSPSNFFSSG Trigger: CCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CAA 90 bp | TCCCTTATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTGCTGGTaGAAGTCCTCACCCAGCAACTTCTTCTCCTCAGGGGACACACAG | + |
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Preference number: 6 (lower is better) Translates to: SLISWLDLIFPDSCW*KSSPSNFFSSGDTQ Trigger: CTGTGTGTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS TCA 72 bp | TCCTCTTCTTCCTTTTCCTCCTCTTCTTCCTCCTGGTaGAGCTGGCTGTGGAGCTTCGTGTGGACTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSFSSSSSSW*SWLWSFVWTAC Trigger: ACAGGCAGTCCACACGAAGCTCCACAGCCAGCTTCACCAGGAGGAAGAAGAGGAGGAAAAGGAAGAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS GCA 72 bp | CTTATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTaGTGGTTGAAGTCCTCACCCAGCAACTTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LISWLDLIFPDS*WLKSSPSNFFS Trigger: GGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 72 bp | ATCTCCTGGCTGGACCTCATCTTTCCAGACTCCTGCTaGTTGAAGTCCTCACCCAGCAACTTCTTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ISWLDLIFPDSC*LKSSPSNFFSS Trigger: TGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACCAGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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| CDS CCA 72 bp | CCCAGCAACTTCTTCTCCTCAGGGGACACACAGCTATaGGGCTCTGTCTCAAATATCTCTTTGTGGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSNFFSSGDTQL*GSVSNISLWSR Trigger: TCTGCTCCACAAAGAGATATTTGAGACAGAGCCCCATAGCTGTGTGTCCCCTGAGGAGAAGAAGTTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178767.3 |
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