Pregenerated sensors for CCER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047025Ensembl transcript IDs: ENSMUST00000060703.6
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGCCCGGATCATCTGTaGTGGGCACAGGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGPDHL*WAQGAL Trigger: CAGAGCCCCCTGTGCCCAGCACAGATGATCCGGGCC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCAGGCCACGACCCCTaGGTCCCCAGCGCTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIAGHDP*VPSASF Trigger: GAAAGAAGCGCTGGGGACGCAGGGGTCGTGGCCTGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR TCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCCACCCGGAAAGGTTaGCCGGGCGAAGCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIATRKG*PGEASC Trigger: GCAAGATGCTTCGCCCGGTCAACCTTTCCGGGTGGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCCACCCTCCTGGGCTTaGTGTGCCCTCAATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIPPSWA*CALNAA Trigger: GGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCTGTGCCCTCAATGCTaGCTGCTGGCGCTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYILCPQC*LLALQL Trigger: AAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCAGTCTCCTGGGGAGATaGCACCCTCCTGGGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYISLLGR*HPPGLA Trigger: AGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACT...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCAGGTGCGCAATGGAATaGAGGATGCCCAGCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIRCAME*RMPSHR Trigger: GCGGTGGCTGGGCATCCTCCATTCCATTGCGCACCT...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCCGGATCATCTGTGCTaGGCACAGGGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIPDHLC*AQGALE Trigger: TTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGTAGTGGAGTCTCCTaGGGAGATGCCACCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGSGVS*GDATLL Trigger: CAGGAGGGTGGCATCTCCCCAGGAGACTCCACTACC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCCCCTTCCTCCCCATTaGCAGCCGCTTCAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIPLPPH*QPLQLP Trigger: AGGAAGTTGAAGCGGCTGGCAATGGGGAGGAAGGGG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGAATGCTATAAGAGGTaGGCGCCAGGGCCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIECYKR*APGPST Trigger: TGTGGAGGGCCCTGGCGCCCACCTCTTATAGCATTC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGAGATGCCACCCTCCTaGGCTTGCTGTGCCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIEMPPS*ACCALN Trigger: ATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGTAGGAGGACCAGGTaGGCAATGGAATGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGRRTR*AMEWRM Trigger: CATCCTCCATTCCATTGCGCACCTGGTCCTCCTACC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCACCAAGAGCCAGGGCTaGGCTGTTGCTTGGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYITKSQG*AVAWVV Trigger: AACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGT...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGCTGCGCTGTTGCTTaGGTTGTTTCCTGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGCAVA*VVSWKP Trigger: AGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR TCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGAGAGGGATCCTGCATaGAGCCATACAGATCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIERDPA*SHTDLP Trigger: CGGAAGATCTGTATGGCTTCATGCAGGATCCCTCTC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR TCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCACATCTTCATCCTCTaGCCCTCTGTCCACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIHIFIL*PSVHFL Trigger: GAGGAAGTGGACAGAGGGTCAGAGGATGAAGATGTG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCCCAATAGGGCCCTCTaGAAGGTTGAAACCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIPNRAL*KVETKS Trigger: GCTCTTGGTTTCAACCTTCCAGAGGGCCCTATTGGG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCTGGTTCATGATGAACTaGGTGGTGTTCCGTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIWFMMN*VVFRGA Trigger: AGCGCCACGGAACACCACCCAGTTCATCATGAACCA...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR GCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGTTAGAGAGGGATCCTaGATGAAGCCATACAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIVREGS*MKPYRS Trigger: AGATCTGTATGGCTTCATGCAGGATCCCTCTCTAAC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCTGCCTCTGGCACATTaGGAATTATTTGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYILPLAH*ELFVLG Trigger: GCCAAGAACAAATAATTCCCAATGTGCCAGAGGCAG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CCA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCTTGGGTTGTTTCCTaGAAGCCTCATACTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: QTHQCLNILSWPTKVFYIAWVVS*KPHTQF Trigger: AAATTGAGTATGAGGCTTCCAGGAAACAACCCAAGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | CGGAGCGCCCCTCTGCCTTCGATGGTAGGAGGACCAGGTGCGCAATaGAATGGAGGATGCCCAGCCACCGCCGCCCAGATTGAGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RSAPLPSMVGGPGAQ*NGGCPATAAQIEGV Trigger: GACCCCCTCAATCTGGGCGGCGGTGGCTGGGCATCCTCCATTCCATTGCGCACCTGGTCCTCCTACCATCGAAGGCAGAGGGGCGCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | GGGGTTCCAGGGTCCGCTCCAGCAGGAGCAGCAGCAAACGCAGAGTaGGTGCAGACCATAGGCCCGGATCATCTGTGCTGGGCACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GVPGSAPAGAAANAE*VQTIGPDHLCWAQG Trigger: CCCCTGTGCCCAGCACAGATGATCCGGGCCTATGGTCTGCACCCACTCTGCGTTTGCTGCTGCTCCTGCTGGAGCGGACCCTGGAACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | ACCATAGGCCCGGATCATCTGTGCTGGGCACAGGGGGCTCTGGAATaGTATAAGAGGTGGGCGCCAGGGCCCTCCACAGCGCTCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: TIGPDHLCWAQGALE*YKRWAPGPSTALPV Trigger: AACTGGGAGCGCTGTGGAGGGCCCTGGCGCCCACCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGGGCCTATGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | GATCATCTGTGCTGGGCACAGGGGGCTCTGGAATGCTATAAGAGGTaGGCGCCAGGGCCCTCCACAGCGCTCCCAGTTGGAGTACAGGGC | + |
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Preference number: 5 (lower is better) Translates to: DHLCWAQGALECYKR*APGPSTALPVGVQG Trigger: GCCCTGTACTCCAACTGGGAGCGCTGTGGAGGGCCCTGGCGCCCACCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | GGCGCATCATTGGTAGTGGAGTCTCCTGGGGAGATGCCACCCTCCTaGGCTTGCTGTGCCCTCAATGCTGCCTGCTGGCGCTCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GASLVVESPGEMPPS*ACCALNAACWRSSF Trigger: GAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACTCCACTACCAATGATGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | CTGCCTTCGATGGTAGGAGGACCAGGTGCGCAATGGAATGGAGGATaGCCAGCCACCGCCGCCCAGATTGAGGGGGTCCTCCCTTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: LPSMVGGPGAQWNGG*PATAAQIEGVLPFV Trigger: AACGAAAGGGAGGACCCCCTCAATCTGGGCGGCGGTGGCTGGGCATCCTCCATTCCATTGCGCACCTGGTCCTCCTACCATCGAAGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | GCAAACGCAGAGTGGGTGCAGACCATAGGCCCGGATCATCTGTGCTaGGCACAGGGGGCTCTGGAATGCTATAAGAGGTGGGCGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ANAEWVQTIGPDHLC*AQGALECYKRWAPG Trigger: CCCTGGCGCCCACCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGGGCCTATGGTCTGCACCCACTCTGCGTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | TTGCTCAGGTCTATTGGTGGATTCCTCGGAAAGGAGCGACGAGGGTaGCGGCGCAGGCCACGACCCCTGCGTCCCCAGCGCTTCTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: LLRSIGGFLGKERRG*RRRPRPLRPQRFFL Trigger: TAGAAAGAAGCGCTGGGGACGCAGGGGTCGTGGCCTGCGCCGCCACCCTCGTCGCTCCTTTCCGAGGAATCCACCAATAGACCTGAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | GTTCATGATGAACTGGGTGGTGTTCCGTGGCGCTCTCATCCCAGGTaGCCGCCACCCGGAAAGGTTGACCGGGCGAAGCATCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VHDELGGVPWRSHPR*PPPGKVDRAKHLAQ Trigger: CTGAGCAAGATGCTTCGCCCGGTCAACCTTTCCGGGTGGCGGGCACCTGGGATGAGAGCGCCACGGAACACCACCCAGTTCATCATGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | TCATTGGTAGTGGAGTCTCCTGGGGAGATGCCACCCTCCTGGGCTTaGTGTGCCCTCAATGCTGCCTGCTGGCGCTCCAGCTTCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SLVVESPGEMPPSWA*CALNAACWRSSFSC Trigger: GCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACTCCACTACCAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | TCCTGGGGAGATGCCACCCTCCTGGGCTTGCTGTGCCCTCAATGCTaGCTGCTGGCGCTCCAGCTTCTCTTGCTGCCTCATGTCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SWGDATLLGLLCPQC*LLALQLLLLPHVFI Trigger: TATGAAGACATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 90 bp | CATGTCTTCATAGACCTGGTTCATGATGAACTGGGTGGTGTTCCGTaGCGCTCTCATCCCAGGTGCCCGCCACCCGGAAAGGTTGACCGG | + |
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Preference number: 5 (lower is better) Translates to: HVFIDLVHDELGGVP*RSHPRCPPPGKVDR Trigger: CCGGTCAACCTTTCCGGGTGGCGGGCACCTGGGATGAGAGCGCCACGGAACACCACCCAGTTCATCATGAACCAGGTCTATGAAGACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | GTTAGAGAGGGATCCTGCATGAAGCCATACAGATCTTCCGGCAACTaGGAATCTTCTTCGACGCCGCTGTGGGGCGCATCATTGGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: VREGSCMKPYRSSGN*ESSSTPLWGASLVV Trigger: CACTACCAATGATGCGCCCCACAGCGGCGTCGAAGAAGATTCGCAGTTGCCGGAAGATCTGTATGGCTTCATGCAGGATCCCTCTCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 90 bp | TGGTTGTGCTGCATTAGAGCAGGACTAAAGGTTAGAGAGGGATCCTaGATGAAGCCATACAGATCTTCCGGCAACTGCGAATCTTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: WLCCIRAGLKVREGS*MKPYRSSGNCESSS Trigger: CGAAGAAGATTCGCAGTTGCCGGAAGATCTGTATGGCTTCATGCAGGATCCCTCTCTAACCTTTAGTCCTGCTCTAATGCAGCACAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCCACCCTCCTGGGCTaGCTGTGCCCTCAATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIATLLG*LCPQCC Trigger: GCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCCAGGGCTGCGCTGTaGCTTGGGTTGTTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIARAAL*LGLFPG Trigger: TCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGGCCCTCTGGAAGGTaGAAACCAAGAGCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGPSGR*KPRARA Trigger: AGCCCTGGCTCTTGGTTTCAACCTTCCAGAGGGCCC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCTCCCCTTCCTCCCCATaGCCAGCCGCTTCAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYISPSSP*PAASTS Trigger: GGAAGTTGAAGCGGCTGGCAATGGGGAGGAAGGGGA...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCACCGGGCGAAGCATCTaGCTCAGGTCTATTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYITGRSI*LRSIGG Trigger: TCCACCAATAGACCTGAGCAAGATGCTTCGCCCGGT...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGGGGTAGGAGACTGGTaGTGCTGCATTAGAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIGVGDW*CCIRAG Trigger: TCCTGCTCTAATGCAGCACAACCAGTCTCCTACCCC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCGCTGTTGCTTGGGTaGTTTCCTGGAAGCCTCATA | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIALLLG*FPGSLI Trigger: TATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCGCGCTCCAGCTTCTCTaGCTGCCTCATGTCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIALQLL*LPHVFI Trigger: TATGAAGACATGAGGCAGCAAGAGAAGCTGGAGCGC...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCCGTCCCCTACTAGGATaGACAAAGGCATTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYIRPLLG*TKAFPE Trigger: CTCTGGGAATGCCTTTGTCAATCCTAGTAGGGGACG...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS-3UTR CAA 90 bp | CAAACACACCAATGTTTAAATATTTTATCGTGGCCAACCAAGGTGTTTTACATCTCTGCCTCTGGCACATaGGGAATTATTTGTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QTHQCLNILSWPTKVFYISASGT*GIICSW Trigger: CCAAGAACAAATAATTCCCAATGTGCCAGAGGCAGA...GATGTAAAACACCTTGGTTGGCCACGATAAAATATTTAAACATTGGTGTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | GAGCGCCCCTCTGCCTTCGATGGTAGGAGGACCAGGTaGGCAATGGAATGGAGGATGCCCAGCCACCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ERPSAFDGRRTR*AMEWRMPSHRR Trigger: GCGGCGGTGGCTGGGCATCCTCCATTCCATTGCGCACCTGGTCCTCCTACCATCGAAGGCAGAGGGGCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | GTGGAGTCTCCTGGGGAGATGCCACCCTCCTGGGCTTaGTGTGCCCTCAATGCTGCCTGCTGGCGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VESPGEMPPSWA*CALNAACWRSS Trigger: GCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | GAGGTGGGCGCCAGGGCCCTCCACAGCGCTCCCAGTTaGAGTACAGGGCCCAATAGGGCCCTCTGGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: EVGARALHSAPS*STGPNRALWKV Trigger: AACCTTCCAGAGGGCCCTATTGGGCCCTGTACTCCAACTGGGAGCGCTGTGGAGGGCCCTGGCGCCCACCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | CCGGATCATCTGTGCTGGGCACAGGGGGCTCTGGAATaGTATAAGAGGTGGGCGCCAGGGCCCTCCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: PDHLCWAQGALE*YKRWAPGPSTA Trigger: CGCTGTGGAGGGCCCTGGCGCCCACCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | GAACTGGGTGGTGTTCCGTGGCGCTCTCATCCCAGGTaGCCGCCACCCGGAAAGGTTGACCGGGCGAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ELGGVPWRSHPR*PPPGKVDRAKH Trigger: ATGCTTCGCCCGGTCAACCTTTCCGGGTGGCGGGCACCTGGGATGAGAGCGCCACGGAACACCACCCAGTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | GCCGCTGTGGGGCGCATCATTGGTAGTGGAGTCTCCTaGGGAGATGCCACCCTCCTGGGCTTGCTGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: AAVGRIIGSGVS*GDATLLGLLCP Trigger: AGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACTCCACTACCAATGATGCGCCCCACAGCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | GGGTCCGCTCCAGCAGGAGCAGCAGCAAACGCAGAGTaGGTGCAGACCATAGGCCCGGATCATCTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSAPAGAAANAE*VQTIGPDHLCW Trigger: CCAGCACAGATGATCCGGGCCTATGGTCTGCACCCACTCTGCGTTTGCTGCTGCTCCTGCTGGAGCGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | TTGGTAGTGGAGTCTCCTGGGGAGATGCCACCCTCCTaGGCTTGCTGTGCCCTCAATGCTGCCTGCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LVVESPGEMPPS*ACCALNAACWR Trigger: GCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATCTCCCCAGGAGACTCCACTACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS TCA 72 bp | GCGCTCTCATCCCAGGTGCCCGCCACCCGGAAAGGTTaGCCGGGCGAAGCATCTTGCTCAGGTCTATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ALSSQVPATRKG*PGEASCSGLLV Trigger: CACCAATAGACCTGAGCAAGATGCTTCGCCCGGTCAACCTTTCCGGGTGGCGGGCACCTGGGATGAGAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | CCACCCTCCTGGGCTTGCTGTGCCCTCAATGCTGCCTaGTGGCGCTCCAGCTTCTCTTGCTGCCTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPSWACCALNAA*WRSSFSCCLMS Trigger: AGACATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | GATGCCACCCTCCTGGGCTTGCTGTGCCCTCAATGCTaGCTGCTGGCGCTCCAGCTTCTCTTGCTGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: DATLLGLLCPQC*LLALQLLLLPH Trigger: ATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGGTGGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | CCTCTGCCTTCGATGGTAGGAGGACCAGGTGCGCAATaGAATGGAGGATGCCCAGCCACCGCCGCCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: PLPSMVGGPGAQ*NGGCPATAAQI Trigger: AATCTGGGCGGCGGTGGCTGGGCATCCTCCATTCCATTGCGCACCTGGTCCTCCTACCATCGAAGGCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 90 bp | ATCCCAGGTGCCCGCCACCCGGAAAGGTTGACCGGGCGAAGCATCTaGCTCAGGTCTATTGGTGGATTCCTCGGAAAGGAGCGACGAGGG | + |
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Preference number: 6 (lower is better) Translates to: IPGARHPERLTGRSI*LRSIGGFLGKERRG Trigger: CCCTCGTCGCTCCTTTCCGAGGAATCCACCAATAGACCTGAGCAAGATGCTTCGCCCGGTCAACCTTTCCGGGTGGCGGGCACCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | CCCTCCTGGGCTTGCTGTGCCCTCAATGCTGCCTGCTaGCGCTCCAGCTTCTCTTGCTGCCTCATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSWACCALNAAC*RSSFSCCLMSS Trigger: TGAAGACATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCCCAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | TGCGAATCTTCTTCGACGCCGCTGTGGGGCGCATCATaGGTAGTGGAGTCTCCTGGGGAGATGCCACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CESSSTPLWGAS*VVESPGEMPPS Trigger: GGAGGGTGGCATCTCCCCAGGAGACTCCACTACCAATGATGCGCCCCACAGCGGCGTCGAAGAAGATTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | GCAGAGTGGGTGCAGACCATAGGCCCGGATCATCTGTaGTGGGCACAGGGGGCTCTGGAATGCTATAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: AEWVQTIGPDHL*WAQGALECYKR Trigger: CCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGGGCCTATGGTCTGCACCCACTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | GCTCCCAGTTGGAGTACAGGGCCCAATAGGGCCCTCTaGAAGGTTGAAACCAAGAGCCAGGGCTGCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: APSWSTGPNRAL*KVETKSQGCAV Trigger: AACAGCGCAGCCCTGGCTCTTGGTTTCAACCTTCCAGAGGGCCCTATTGGGCCCTGTACTCCAACTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | GAGTGGGTGCAGACCATAGGCCCGGATCATCTGTGCTaGGCACAGGGGGCTCTGGAATGCTATAAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EWVQTIGPDHLC*AQGALECYKRW Trigger: CCACCTCTTATAGCATTCCAGAGCCCCCTGTGCCCAGCACAGATGATCCGGGCCTATGGTCTGCACCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | ATAGACCTGGTTCATGATGAACTGGGTGGTGTTCCGTaGCGCTCTCATCCCAGGTGCCCGCCACCCGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: IDLVHDELGGVP*RSHPRCPPPGK Trigger: CTTTCCGGGTGGCGGGCACCTGGGATGAGAGCGCCACGGAACACCACCCAGTTCATCATGAACCAGGTCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | GTTGGAGTACAGGGCCCAATAGGGCCCTCTGGAAGGTaGAAACCAAGAGCCAGGGCTGCGCTGTTGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VGVQGPIGPSGR*KPRARAALLLG Trigger: CCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAACCTTCCAGAGGGCCCTATTGGGCCCTGTACTCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | GCCCGCCACCCGGAAAGGTTGACCGGGCGAAGCATCTaGCTCAGGTCTATTGGTGGATTCCTCGGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ARHPERLTGRSI*LRSIGGFLGKE Trigger: CTCCTTTCCGAGGAATCCACCAATAGACCTGAGCAAGATGCTTCGCCCGGTCAACCTTTCCGGGTGGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | AGGGCCCTCTGGAAGGTTGAAACCAAGAGCCAGGGCTaGGCTGTTGCTTGGGTTGTTTCCTGGAAGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RALWKVETKSQG*AVAWVVSWKPH Trigger: ATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAACCTTCCAGAGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 90 bp | GGCTTGCTGTGCCCTCAATGCTGCCTGCTGGCGCTCCAGCTTCTCTaGCTGCCTCATGTCTTCATAGACCTGGTTCATGATGAACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GLLCPQCCLLALQLL*LPHVFIDLVHDELG Trigger: ACCCAGTTCATCATGAACCAGGTCTATGAAGACATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCACAGCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | TCCTCTACCAGCCCTGGGGTAGGAGACTGGTTGTGCTaGATTAGAGCAGGACTAAAGGTTAGAGAGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSTSPGVGDWLC*IRAGLKVREGS Trigger: GGATCCCTCTCTAACCTTTAGTCCTGCTCTAATGCAGCACAACCAGTCTCCTACCCCAGGGCTGGTAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | TGCCCTCAATGCTGCCTGCTGGCGCTCCAGCTTCTCTaGCTGCCTCATGTCTTCATAGACCTGGTTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: CPQCCLLALQLL*LPHVFIDLVHD Trigger: ATCATGAACCAGGTCTATGAAGACATGAGGCAGCAAGAGAAGCTGGAGCGCCAGCAGGCAGCATTGAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | TCTTCCTCTACCAGCCCTGGGGTAGGAGACTGGTTGTaGTGCATTAGAGCAGGACTAAAGGTTAGAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSSTSPGVGDWL*CIRAGLKVREG Trigger: TCCCTCTCTAACCTTTAGTCCTGCTCTAATGCAGCACAACCAGTCTCCTACCCCAGGGCTGGTAGAGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | TTGAAACCAAGAGCCAGGGCTGCGCTGTTGCTTGGGTaGTTTCCTGGAAGCCTCATACTCAATTTTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LKPRARAALLLG*FPGSLILNFGA Trigger: GGCCCCAAAATTGAGTATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | TCCTCTTCCTCTACCAGCCCTGGGGTAGGAGACTGGTaGTGCTGCATTAGAGCAGGACTAAAGGTTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSTSPGVGDW*CCIRAGLKVRE Trigger: CTCTCTAACCTTTAGTCCTGCTCTAATGCAGCACAACCAGTCTCCTACCCCAGGGCTGGTAGAGGAAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 90 bp | TCTGGAAGGTTGAAACCAAGAGCCAGGGCTGCGCTGTTGCTTGGGTaGTTTCCTGGAAGCCTCATACTCAATTTTGGGGCCATCACGGTA | + |
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Preference number: 6 (lower is better) Translates to: SGRLKPRARAALLLG*FPGSLILNFGAITV Trigger: TACCGTGATGGCCCCAAAATTGAGTATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAACCTTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CAA 72 bp | TCTGGAAGGTTGAAACCAAGAGCCAGGGCTGCGCTGTaGCTTGGGTTGTTTCCTGGAAGCCTCATACTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SGRLKPRARAAL*LGLFPGSLILN Trigger: ATTGAGTATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAACCTTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS CCA 72 bp | AAGGTTGAAACCAAGAGCCAGGGCTGCGCTGTTGCTTaGGTTGTTTCCTGGAAGCCTCATACTCAATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KVETKSQGCAVA*VVSWKPHTQFW Trigger: CCAAAATTGAGTATGAGGCTTCCAGGAAACAACCCAAGCAACAGCGCAGCCCTGGCTCTTGGTTTCAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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| CDS GCA 72 bp | TGCATTAGAGCAGGACTAAAGGTTAGAGAGGGATCCTaGATGAAGCCATACAGATCTTCCGGCAACTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: CIRAGLKVREGS*MKPYRSSGNCE Trigger: TTCGCAGTTGCCGGAAGATCTGTATGGCTTCATGCAGGATCCCTCTCTAACCTTTAGTCCTGCTCTAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060703.6 |
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