Pregenerated sensors for CCDC9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045838Ensembl transcript IDs: ENSMUST00000059997.10, ENSMUST00000059997.9
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACCCACACACTCTGCTCCCCTCATCTCCAGGTGTTCTCGCCCTaGCAGCTCCTCCTGGGTACCCTCCTTGCTTGGCTCCTTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PTHTLCSPHLQVFSP*QLLLGTLLAWLLPA Trigger: GGCTGGAAGGAGCCAAGCAAGGAGGGTACCCAGGAGGAGCTGGCAGGGCGAGAACACCTGGAGATGAGGGGAGCAGAGTGTGTGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR GCA 90 bp | TCTCCAGGTGTTCTCGCCCTGCCAGCTCCTCCTGGGTACCCTCCTTaGTTGGCTCCTTCCAGCCCTGCATCTGGTTTCCCAGAGTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: SPGVLALPAPPGYPP*LAPSSPASGFPELF Trigger: AAACAACTCTGGGAAACCAGATGCAGGGCTGGAAGGAGCCAAGCAAGGAGGGTACCCAGGAGGAGCTGGCAGGGCGAGAACACCTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | TCGGGAAGAGCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTGGAATaGAGGTGTCCTGTGTTGGCTTCCATTCTCATCAATCCCCGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SGRASCCCPHCRLLE*RCPVLASILINPRD Trigger: GTCCCGGGGATTGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCTCTTCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CCA 90 bp | GCTTCTACAGATGAGAACAGCACTTGCCATTCAGCCTTGAGCTGTTaGATGACTGAGTGTCTTCCCTCCCTCCGGCTGGCAGAGTCACCC | + |
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Preference number: 1 (lower is better) Translates to: ASTDENSTCHSALSC*MTECLPSLRLAESP Trigger: GGGTGACTCTGCCAGCCGGAGGGAGGGAAGACACTCAGTCATCCAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATCTGTAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CCA 90 bp | GCTGTTGCCCGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTaGCTTCCATTCTCATCAATCCCCGGGACAGCTTTCCTCAGTACC | + |
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Preference number: 1 (lower is better) Translates to: AVARTAGFWNEGVLC*LPFSSIPGTAFLST Trigger: GGTACTGAGGAAAGCTGTCCCGGGGATTGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | AAAGGCATGGTTATCAGAAAGGGGCTAGGCTGGCCATGCCAGCTTTaGGACTGCCTAGAGCTCAGGAGCCTGAAGGCTTGTGACTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: KGMVIRKGLGWPCQL*DCLELRSLKACDWR Trigger: TCTCCAGTCACAAGCCTTCAGGCTCCTGAGCTCTAGGCAGTCTCAAAGCTGGCATGGCCAGCCTAGCCCCTTTCTGATAACCATGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR GCA 90 bp | CATCACACCCGGGGCTACCAGGCTTCTACAGATGAGAACAGCACTTaGCATTCAGCCTTGAGCTGTTGGATGACTGAGTGTCTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: HHTRGYQASTDENST*HSALSCWMTECLPS Trigger: GGAGGGAAGACACTCAGTCATCCAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATCTGTAGAAGCCTGGTAGCCCCGGGTGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CCA 90 bp | AAAGGAAGCCACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTaGGCCTCATGGGAGGGGCCTGGATGGAGTTGGAAAGACACATCC | + |
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Preference number: 1 (lower is better) Translates to: KGSHSLCRVWIIHQT*ASWEGPGWSWKDTS Trigger: GGATGTGTCTTTCCAACTCCATCCAGGCCCCTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCTTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CCA 90 bp | CTTTCTCGGGAAGAGCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTaGAATGAAGGTGTCCTGTGTTGGCTTCCATTCTCATCAATCCCC | + |
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Preference number: 1 (lower is better) Translates to: LSREELPAVARTAGF*NEGVLCWLPFSSIP Trigger: GGGGATTGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCTCTTCCCGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CCA 90 bp | CGGAGGAAGGCTCAGCACCTACTAGTGAGCTCTCTCATTTTCCCGTaGCAAAAGGAGAATCCTAGCACAGTTCAAAGAGCCCTGCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: RRKAQHLLVSSLIFP*QKENPSTVQRALLD Trigger: ATCCAGCAGGGCTCTTTGAACTGTGCTAGGATTCTCCTTTTGCCACGGGAAAATGAGAGAGCTCACTAGTAGGTGCTGAGCCTTCCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR GCA 90 bp | TTAGCTGAGGTTGCTAATCCTCTGACTGTACTGTGTGCTTGCTTTTaGATGGCCTTGGTGAGGGAAAGTGGAGAAGGAAGAGAGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LAEVANPLTVLCACF*MALVRESGEGREGR Trigger: CCTGCCCTCTCTTCCTTCTCCACTTTCCCTCACCAAGGCCATGCAAAAGCAAGCACACAGTACAGTCAGAGGATTAGCAACCTCAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | GTAAGGGGACTGAGGCTTTTAGAGGTTAACGTTGAGCAAGGTAGATaGGAGGTGCAGGGTTTAGTCTCTCAGACTCCAAGGTGTGCTTCG | + |
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Preference number: 1 (lower is better) Translates to: VRGLRLLEVNVEQGR*EVQGLVSQTPRCAS Trigger: CGAAGCACACCTTGGAGTCTGAGAGACTAAACCCTGCACCTCTCATCTACCTTGCTCAACGTTAACCTCTAAAAGCCTCAGTCCCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR GCA 90 bp | ATGCACTTAGCTGAGGTTGCTAATCCTCTGACTGTACTGTGTGCTTaGTTTTGCATGGCCTTGGTGAGGGAAAGTGGAGAAGGAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: MHLAEVANPLTVLCA*FCMALVRESGEGRE Trigger: CTCTCTTCCTTCTCCACTTTCCCTCACCAAGGCCATGCAAAAGCAAGCACACAGTACAGTCAGAGGATTAGCAACCTCAGCTAAGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | TCTCTGCCTGAACATGCTCTGTTCCAGTCCCATCTTGAGGAGTCATaGGCTCCAGGGCCTGTGTCACACTTCAAAGTCAAAATATACTTG | + |
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Preference number: 1 (lower is better) Translates to: SLPEHALFQSHLEES*APGPVSHFKVKIYL Trigger: CAAGTATATTTTGACTTTGAAGTGTGACACAGGCCCTGGAGCTCATGACTCCTCAAGATGGGACTGGAACAGAGCATGTTCAGGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR GCA 90 bp | CCCCTAGTTCTTGCAGAGCTGGAAACTTGCTTTAGATCTAGAGTCTaGTCTAATCTGAACCCTTCACACTCGAATCCAGAACCTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: PLVLAELETCFRSRV*SNLNPSHSNPEPDS Trigger: GGAGTCAGGTTCTGGATTCGAGTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTCTGCAAGAACTAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | CCAGCCCCACTGAGTTCAACCTGTACCACACATCACACAAAAACATaGGAAGAGTTCTCTAAACAGCCTGACTTGCTGAAGAGTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: PAPLSSTCTTHHTKT*EEFSKQPDLLKSQS Trigger: TGACTGACTCTTCAGCAAGTCAGGCTGTTTAGAGAACTCTTCTCATGTTTTTGTGTGATGTGTGGTACAGGTTGAACTCAGTGGGGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | TTGCAGAGCTGGAAACTTGCTTTAGATCTAGAGTCTGCTCTAATCTaGACCCTTCACACTCGAATCCAGAACCTGACTCCTCAAAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: LQSWKLALDLESALI*TLHTRIQNLTPQRV Trigger: AACCCTTTGAGGAGTCAGGTTCTGGATTCGAGTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR TCA 90 bp | ATCACACAAAAACATGAGAAGAGTTCTCTAAACAGCCTGACTTGCTaGAGAGTCAGTCACCCTTGCCTGAGTAGAGGGAATAGACATGGA | + |
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Preference number: 1 (lower is better) Translates to: ITQKHEKSSLNSLTC*RVSHPCLSRGNRHG Trigger: TCCATGTCTATTCCCTCTACTCAGGCAAGGGTGACTGACTCTTCAGCAAGTCAGGCTGTTTAGAGAACTCTTCTCATGTTTTTGTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CAA 90 bp | CCAGGTGTTCTCGCCCTGCCAGCTCCTCCTGGGTACCCTCCTTGCTaGGCTCCTTCCAGCCCTGCATCTGGTTTCCCAGAGTTGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PGVLALPAPPGYPPC*APSSPASGFPELFV Trigger: CACAAACAACTCTGGGAAACCAGATGCAGGGCTGGAAGGAGCCAAGCAAGGAGGGTACCCAGGAGGAGCTGGCAGGGCGAGAACACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGGGTGGGTCTCTTCAGGCACCTACCCTCATCACACCCGGGGCTACCAGGGATGAGAACAGCACTTaGCATTCAGCCTTGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RQGGSLQAPTLITPGATRDENST*HSALSC Trigger: ACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATC...CCTGGTAGCCCCGGGTGTGATGAGGGTAGGTGCCTGAAGAGACCCACCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGGAAACCTCTTCCACTTGGCAGGGTAGCATCCCCCTAGTTCTTGCAGAGAAGGGAGGAGGGGGCTaGATGGTGCCACCAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: SQETSSTWQGSIPLVLAEKGGGG*MVPPRC Trigger: GCATCTTGGTGGCACCATGCAGCCCCCTCCTCCCTT...CTCTGCAAGAACTAGGGGGATGCTACCCTGCCAAGTGGAAGAGGTTTCCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTACTTGTTGGAGGGAAGAGGGTTTCCTAAGGGAAGGAAGACTCTGGGTCTTCCCTCCCTCCGGCTaGCAGAGTCACCCTCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LCTCWREEGFLREGRLWVFPPSG*QSHPRP Trigger: TGGGCGAGGGTGACTCTGCCAGCCGGAGGGAGGGAA...GACCCAGAGTCTTCCTTCCCTTAGGAAACCCTCTTCCCTCCAACAAGTACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CAA 90 bp | GGCTACCAGGCTTCTACAGATGAGAACAGCACTTGCCATTCAGCCTaGAGCTGTTGGATGACTGAGTGTCTTCCCTCCCTCCGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GYQASTDENSTCHSA*SCWMTECLPSLRLA Trigger: TGCCAGCCGGAGGGAGGGAAGACACTCAGTCATCCAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATCTGTAGAAGCCTGGTAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTATAATTCACCAGACGTaGGCCTCATGGGAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SFLLLPALQASGMKVSCVIIHQT*ASWEGP Trigger: AGGCCCCTCCCATGAGGCCCACGTCTGGTGAATTAT...AACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGAAACCTCTTCCACTTGGCAGGGTAGCATCCCCCTAGTTCTTGCAGAGCCAAAAAGGAGGCCATaGCTCCCTCACCTGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SQETSSTWQGSIPLVLAEPKRRP*LPHLGH Trigger: ATGTCCCAGGTGAGGGAGCCATGGCCTCCTTTTTGG...CTCTGCAAGAACTAGGGGGATGCTACCCTGCCAAGTGGAAGAGGTTTCCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCATTCTCATCAATCCCCGGGACAGCTTTCCTCAGTACCCTAAAGGCTGAGCCTGAAGGCTTGTaGCTGGAGAGGGAGAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: WLPFSSIPGTAFLSTLKAEPEGL*LERESW Trigger: CCAACTCTCCCTCTCCAGTCACAAGCCTTCAGGCTC...AGCCTTTAGGGTACTGAGGAAAGCTGTCCCGGGGATTGATGAGAATGGAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTGGGCCTCATGGGAGTGTTCCTGTCAGCCATaGGCCCCAAACCACTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SHSLCRVWIIHQTWASWECSCQP*APNHFL Trigger: GAGAAAGTGGTTTGGGGCTCATGGCTGACAGGAACA...CTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTGGGCCTCATGGGAGTGTCTGATCTGGATATaGGGAGGAAGGCTCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: SHSLCRVWIIHQTWASWECLIWI*GGRLST Trigger: GGTGCTGAGCCTTCCTCCGCATATCCAGATCAGACA...CTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | CGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTGGCTTCCATTCTCATCAGAGGAGGGGGCTGCATaGTGCCACCAAGATGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RTAGFWNEGVLCWLPFSSEEGAA*CHQDAK Trigger: CTTTGCATCTTGGTGGCACCATGCAGCCCCCTCCTC...TGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTGAAACCTCTTCCACTTaGCAGGGTAGCATCCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SFLLLPALQASGMKVSCVETSST*QGSIPL Trigger: TAGGGGGATGCTACCCTGCCAAGTGGAAGAGGTTTC...AACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTGGGCCTCATGGGAGCTGAAGGCTTGTGACTaGAGAGGGAGAGTTGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SHSLCRVWIIHQTWASWELKACD*RGRVGN Trigger: ATTGCCAACTCTCCCTCTCCAGTCACAAGCCTTCAG...CTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | GTGACCTGTGTCTTTTCCTGGAGAAGAGCTCCCCTTTCTCGGGAAGAGCTTCCTTCAGTCACCCTTGCCTaGGTAGAGGGAATAGACATG | + |
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Preference number: 2 (lower is better) Translates to: VTCVFSWRRAPLSREELPSVTLA*VEGIDM Trigger: CATGTCTATTCCCTCTACTCAGGCAAGGGTGACTGA...AGGAAGCTCTTCCCGAGAAAGGGGAGCTCTTCTCCAGGAAAAGACACAGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | CGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTGGCTTCCATTCTCATCAAGAGCTCTCTCTGCCTaGACATGCTCTGTTCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: RTAGFWNEGVLCWLPFSSRALSA*TCSVPV Trigger: GACTGGAACAGAGCATGTTCAGGCAGAGAGAGCTCT...TGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGAAACCTCTTCCACTTGGCAGGGTAGCATCCCCCTAGTTCTTGCAGAGCACTGGCTGGATTACTaGGAGAAGATGCTCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SQETSSTWQGSIPLVLAEHWLDY*EKMLRK Trigger: TTTCCTGAGCATCTTCTCCCAGTAATCCAGCCAGTG...CTCTGCAAGAACTAGGGGGATGCTACCCTGCCAAGTGGAAGAGGTTTCCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCACACTCGAATCCAGAACCTGACTCCTCAAAGGGTTCTTCAGGCCAAAAAGCCCTCGCCCACTGGCTaGATTACTGGGAGAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LHTRIQNLTPQRVLQAKKPSPTG*ITGRRC Trigger: GCATCTTCTCCCAGTAATCCAGCCAGTGGGCGAGGG...CTTTTTGGCCTGAAGAACCCTTTGAGGAGTCAGGTTCTGGATTCGAGTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCCATTCTCATCAATCCCCGGGACAGCTTTCCTCAGTACCCTAAAGGCTCTGTGTGCTTGCTTTTaGATGGCCTTGGTGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: WLPFSSIPGTAFLSTLKALCACF*MALVRE Trigger: TTCCCTCACCAAGGCCATGCAAAAGCAAGCACACAG...AGCCTTTAGGGTACTGAGGAAAGCTGTCCCGGGGATTGATGAGAATGGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCACCAAGATGCAAAGGGCACATGCCATATCAAAAGAGGGGAGCAGAGGCAGACTGTACTGTGTGCTTaGTTTTGCATGGCCTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: CHQDAKGTCHIKRGEQRQTVLCA*FCMALV Trigger: CACCAAGGCCATGCAAAAGCAAGCACACAGTACAGT...CTGCCTCTGCTCCCCTCTTTTGATATGGCATGTGCCCTTTGCATCTTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTACTTGTTGGAGGGAAGAGGGTTTCCTAAGGGAAGGAAGACTCTGGGTCCAAGAGATCCCAGCCTaGCCAATACACCAAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LCTCWREEGFLREGRLWVQEIPA*PIHQEP Trigger: AGGCTCTTGGTGTATTGGCCAGGCTGGGATCTCTTG...GACCCAGAGTCTTCCTTCCCTTAGGAAACCCTCTTCCCTCCAACAAGTACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR CCA 90 bp | CTAACGTTCAGGCCTTCCCCAGCCCCACTGAGTTCAACCTGTACCACACATCACTCTCTCATTTTCCCGTaGCAAAAGGAGAATCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LTFRPSPAPLSSTCTTHHSLIFP*QKENPS Trigger: GCTAGGATTCTCCTTTTGCCACGGGAAAATGAGAGA...GTGATGTGTGGTACAGGTTGAACTCAGTGGGGCTGGGGAAGGCCTGAACGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGAAACTTGCTTTAGATCTAGAGTCTGCTCTAATCTGAACCCTTCACACCTTCCCCAGCCCCACTaGGTTCAACCTGTACCACAC | + |
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Preference number: 2 (lower is better) Translates to: ELETCFRSRVCSNLNPSHLPQPH*VQPVPH Trigger: GTGTGGTACAGGTTGAACTCAGTGGGGCTGGGGAAG...GTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCACCAAGATGCAAAGGGCACATGCCATATCAAAAGAGGGGAGCAGAGGCAGCCTGTGGAATTTTGCTaGATTGCTCAACCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: CHQDAKGTCHIKRGEQRQPVEFC*IAQPER Trigger: CCTTTCTGGTTGAGCAATGCAGCAAAATTCCACAGG...CTGCCTCTGCTCCCCTCTTTTGATATGGCATGTGCCCTTTGCATCTTGGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTACTAGTGTAGAGGTATaGATAAGAGGCCCTTACATG | + |
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Preference number: 2 (lower is better) Translates to: SFLLLPALQASGMKVSCVTSVEV*IRGPYM Trigger: CATGTAAGGGCCTCTTATGCATACCTCTACACTAGT...AACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTACTTGTTGGAGGGAAGAGGGTTTCCTAAGGGAAGGAAGACTCTGGGTCACCTGTGGTCAAACTTaGCTTGCCCTGTGTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCTCWREEGFLREGRLWVTCGQT*LALCCL Trigger: CAGACAACACAGGGCAAGGCAAGTTTGACCACAGGT...GACCCAGAGTCTTCCTTCCCTTAGGAAACCCTCTTCCCTCCAACAAGTACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR CAA 90 bp | TCAGACCTTTCAACAAAGCAACTAGGAAGAATCATGGCTGGCCCTTaGAGGCCTCAAGAGGAATGGTTGACCTGGGTTTCTTCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SDLSTKQLGRIMAGP*RPQEEWLTWVSSAP Trigger: TGGAGCAGAAGAAACCCAGGTCAACCATTCCTCTTGAGGCCTCAAAGGGCCAGCCATGATTCTTCCTAGTTGCTTTGTTGAAAGGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR TCA 90 bp | CTTCACACTCGAATCCAGAACCTGACTCCTCAAAGGGTTCTTCAGGCCAAAAAGTTTGCATGGCCTTGGTaGGGGAAAGTGGAGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LHTRIQNLTPQRVLQAKKFAWPW*GKVEKE Trigger: TTCCTTCTCCACTTTCCCTCACCAAGGCCATGCAAA...CTTTTTGGCCTGAAGAACCCTTTGAGGAGTCAGGTTCTGGATTCGAGTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
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| 3UTR-3UTR GCA 90 bp | CGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTGGCTTCCATTCTCATCAGTCCCTGTGGAATTTTaGTGCATTGCTCAACCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTAGFWNEGVLCWLPFSSVPVEF*CIAQPE Trigger: TTCTGGTTGAGCAATGCAGCAAAATTCCACAGGGAC...TGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTTTCTTCTGCTCCATAGTTGACTCTAACAGAGCAGGATGGCACAACCTGCATGGCTCCCTCACCTaGGACATGTTAGAAATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGFFCSIVDSNRAGWHNLHGSLT*DMLEML Trigger: TAGCATTTCTAACATGTCCCAGGTGAGGGAGCCATG...CAGGTTGTGCCATCCTGCTCTGTTAGAGTCAACTATGGAGCAGAAGAAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR TCA 90 bp | CGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTGGCTTCCATTCTCATCAGACTGGAAGGCAAAATaGAAACGTGAATTTGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: RTAGFWNEGVLCWLPFSSDWKAK*KREFGF Trigger: GAATCCAAATTCACGTTTTCATTTTGCCTTCCAGTC...TGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGGAAACTTGCTTTAGATCTAGAGTCTGCTCTAATCTGAACCCTTCACACTCAGCCTTGAGCTGTTaGATGACTGAGTGTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ELETCFRSRVCSNLNPSHSALSC*MTECLP Trigger: GGGAAGACACTCAGTCATCCAACAGCTCAAGGCTGA...GTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTTGGCAACATCAAGTGGGAAGCAAACTTTGAATCTTCTCTTTTCTCTCTCTGTGAGTCACCTGGATaGAAGGCATGGTTATCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TVGNIKWEANFESSLFSLCESPG*KAWLSE Trigger: TTCTGATAACCATGCCTTTCATCCAGGTGACTCACA...GAGAGAGAAAAGAGAAGATTCAAAGTTTGCTTCCCACTTGATGTTGCCAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | ACACTCTGCTCCCCTCATCTCCAGGTGTTCTCGCCCTaGCAGCTCCTCCTGGGTACCCTCCTTGCTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLCSPHLQVFSP*QLLLGTLLAWL Trigger: GAGCCAAGCAAGGAGGGTACCCAGGAGGAGCTGGCAGGGCGAGAACACCTGGAGATGAGGGGAGCAGAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | ACCAGCAGCCGTAACTCCCACCACACAGAAGACTCTTaGCTGAGTTCTCCCCTTCGCAGCCTAGCTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSRNSHHTEDS*LSSPLRSLAPQ Trigger: TTGGGGAGCTAGGCTGCGAAGGGGAGAACTCAGTCAAGAGTCTTCTGTGTGGTGGGAGTTACGGCTGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | TCCCTCCGGCTGGCAGAGTCACCCTCGCCCACTGGCTaGATTACTGGGAGAAGATGCTCAGGAAATGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLRLAESPSPTG*ITGRRCSGNVC Trigger: ACAAACATTTCCTGAGCATCTTCTCCCAGTAATCCAGCCAGTGGGCGAGGGTGACTCTGCCAGCCGGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | CCCTCATCACACCCGGGGCTACCAGGCTTCTACAGATaGGAACAGCACTTGCCATTCAGCCTTGAGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSSHPGLPGFYR*EQHLPFSLELL Trigger: CAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATCTGTAGAAGCCTGGTAGCCCCGGGTGTGATGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | CACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTaGGCCTCATGGGAGGGGCCTGGATGGAGTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HSLCRVWIIHQT*ASWEGPGWSWK Trigger: TTTCCAACTCCATCCAGGCCCCTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | GATGAGAACAGCACTTGCCATTCAGCCTTGAGCTGTTaGATGACTGAGTGTCTTCCCTCCCTCCGGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DENSTCHSALSC*MTECLPSLRLA Trigger: TGCCAGCCGGAGGGAGGGAAGACACTCAGTCATCCAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACAGCTTGTGCAGAGTCTGGATAATTCACCAGACGTGGGCCTCATGGGAGACAGGGATACCAGCCTaGAACAAGAGATCCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHSLCRVWIIHQTWASWETGIPA*NKRSQP Trigger: AGGCTGGGATCTCTTGTTCAAGGCTGGTATCCCTGT...CTCCCATGAGGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | CAGGATGGCACAACCTGGACAGAGAGTTGGGAGGTGTaGCCTGTGTCTTTTCCTGGAGAAGAGCTCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QDGTTWTESWEV*PVSFPGEELPF Trigger: AAAGGGGAGCTCTTCTCCAGGAAAAGACACAGGTCACACCTCCCAACTCTCTGTCCAGGTTGTGCCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | CGCACTGCAGGCTTCTGGAATGAAGGTGTCCTGTGTTaGCTTCCATTCTCATCAATCCCCGGGACAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RTAGFWNEGVLC*LPFSSIPGTAF Trigger: GAAAGCTGTCCCGGGGATTGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGACCTGTGTCTTTTCCTGGAGAAGAGCTCCCCTTTCTCGGGAAGAGCTTCCTACTGTGTGCTTGCTTTaGCATGGCCTTGGTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTCVFSWRRAPLSREELPTVCLL*HGLGEG Trigger: TCCCTCACCAAGGCCATGCAAAAGCAAGCACACAGT...AGGAAGCTCTTCCCGAGAAAGGGGAGCTCTTCTCCAGGAAAAGACACAGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | GCTTCCTGCTGTTGCCCGCACTGCAGGCTTCTGGAATaGAGGTGTCCTGTGTTGGCTTCCATTCTCATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASCCCPHCRLLE*RCPVLASILIN Trigger: ATTGATGAGAATGGAAGCCAACACAGGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | GCCCTTACATGGTGTCCCTGTGGAATTTTGCTGCATTaGTCAACCAGAAAGGTACCAGACTCCCACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALTWCPCGILLH*STRKVPDSHQQ Trigger: CTGCTGGTGGGAGTCTGGTACCTTTCTGGTTGAGCAATGCAGCAAAATTCCACAGGGACACCATGTAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | CGGGGCTACCAGGCTTCTACAGATGAGAACAGCACTTaGCATTCAGCCTTGAGCTGTTGGATGACTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGYQASTDENST*HSALSCWMTEC Trigger: ACACTCAGTCATCCAACAGCTCAAGGCTGAATGGCAAGTGCTGTTCTCATCTGTAGAAGCCTGGTAGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | TTTTCCCTTTCTGGACTTCCTCTCAGCCACCACCTGTaGGCACGTCTAAAGCCAGGAAACCTCTTCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLSGLPLSHHL*ARLKPGNLFHL Trigger: CAAGTGGAAGAGGTTTCCTGGCTTTAGACGTGCCCACAGGTGGTGGCTGAGAGGAAGTCCAGAAAGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTTCTTCTGCTCCATAGTTGACTCTAACAGAGCAGGATGGCACAACCTGGGGGCCTGGATGGAGTaGGAAAGACACATCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LGFFCSIVDSNRAGWHNLGAWME*ERHILM Trigger: CATCAGGATGTGTCTTTCCAACTCCATCCAGGCCCC...CAGGTTGTGCCATCCTGCTCTGTTAGAGTCAACTATGGAGCAGAAGAAACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACAACCTGGACAGAGAGTTGGGAGGTGTGACCTGTGTCTTTTCCTGGAGAAGACTGGAGAGGGAGAGTaGGCAATGACGAACTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: AQPGQRVGRCDLCLFLEKTGEGE*AMTNYK Trigger: CTTATAGTTCGTCATTGCCAACTCTCCCTCTCCAGT...CTTCTCCAGGAAAAGACACAGGTCACACCTCCCAACTCTCTGTCCAGGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | GAGGCCTCAAGAGGAATGGTTGACCTGGGTTTCTTCTaGTCCATAGTTGACTCTAACAGAGCAGGATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EASRGMVDLGFF*SIVDSNRAGWH Trigger: GTGCCATCCTGCTCTGTTAGAGTCAACTATGGAGCAGAAGAAACCCAGGTCAACCATTCCTCTTGAGGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | CTCCTCAAAGGGTTCTTCAGGCCAAAAAGGAGGCCATaGCTCCCTCACCTGGGACATGTTAGAAATGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLKGFFRPKRRP*LPHLGHVRNAN Trigger: GTTAGCATTTCTAACATGTCCCAGGTGAGGGAGCCATGGCCTCCTTTTTGGCCTGAAGAACCCTTTGAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | TTCTTCTGCTCCATAGTTGACTCTAACAGAGCAGGATaGCACAACCTGGACAGAGAGTTGGGAGGTGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: FFCSIVDSNRAG*HNLDRELGGVT Trigger: GGTCACACCTCCCAACTCTCTGTCCAGGTTGTGCCATCCTGCTCTGTTAGAGTCAACTATGGAGCAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTACTTGTTGGAGGGAAGAGGGTTTCCTAAGGGAAGGAAGACTCTGGGTCGGCTCCTACCAAATCTaGCTTGGTGGGAAATGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LCTCWREEGFLREGRLWVGSYQI*LGGKCL Trigger: TAGGCATTTCCCACCAAGCAAGATTTGGTAGGAGCC...GACCCAGAGTCTTCCTTCCCTTAGGAAACCCTCTTCCCTCCAACAAGTACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTACTTGTTGGAGGGAAGAGGGTTTCCTAAGGGAAGGAAGACTCTGGGTCGATCGCATTGCACAGTaGGCAACATCAAGTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCTCWREEGFLREGRLWVDRIAQ*ATSSGK Trigger: CTTCCCACTTGATGTTGCCAACTGTGCAATGCGATC...GACCCAGAGTCTTCCTTCCCTTAGGAAACCCTCTTCCCTCCAACAAGTACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | GAACATGCTCTGTTCCAGTCCCATCTTGAGGAGTCATaGGCTCCAGGGCCTGTGTCACACTTCAAAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EHALFQSHLEES*APGPVSHFKVK Trigger: TTTGACTTTGAAGTGTGACACAGGCCCTGGAGCTCATGACTCCTCAAGATGGGACTGGAACAGAGCATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | CATAAGAGGCCCTTACATGGTGTCCCTGTGGAATTTTaGTGCATTGCTCAACCAGAAAGGTACCAGACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HKRPLHGVPVEF*CIAQPERYQTP Trigger: GGGAGTCTGGTACCTTTCTGGTTGAGCAATGCAGCAAAATTCCACAGGGACACCATGTAAGGGCCTCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | GCTGAGGTTGCTAATCCTCTGACTGTACTGTGTGCTTaGTTTTGCATGGCCTTGGTGAGGGAAAGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AEVANPLTVLCA*FCMALVRESGE Trigger: TTCTCCACTTTCCCTCACCAAGGCCATGCAAAAGCAAGCACACAGTACAGTCAGAGGATTAGCAACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | TGCCAGATTTTTACGTCCTCAACCTGTGGTCAAACTTaGCTTGCCCTGTGTTGTCTGACGGATCGCATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CQIFTSSTCGQT*LALCCLTDRIA Trigger: TGCAATGCGATCCGTCAGACAACACAGGGCAAGGCAAGTTTGACCACAGGTTGAGGACGTAAAAATCTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | GCTCAGCACCTACTAGTGAGCTCTCTCATTTTCCCGTaGCAAAAGGAGAATCCTAGCACAGTTCAAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AQHLLVSSLIFP*QKENPSTVQRA Trigger: GGCTCTTTGAACTGTGCTAGGATTCTCCTTTTGCCACGGGAAAATGAGAGAGCTCACTAGTAGGTGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACACTCGAATCCAGAACCTGACTCCTCAAAGGGTTCTTCAGGCCAAAAAGGACTGTACTGTGTGCTaGCTTTTGCATGGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHTRIQNLTPQRVLQAKKDCTVC*LLHGLG Trigger: ACCAAGGCCATGCAAAAGCAAGCACACAGTACAGTC...CTTTTTGGCCTGAAGAACCCTTTGAGGAGTCAGGTTCTGGATTCGAGTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | TCACCCTCGCCCACTGGCTGGATTACTGGGAGAAGATaGTCAGGAAATGTTTGTTGTATCAAAAGGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPSPTGWITGRR*SGNVCCIKRKP Trigger: TGGCTTCCTTTTGATACAACAAACATTTCCTGAGCATCTTCTCCCAGTAATCCAGCCAGTGGGCGAGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | TCTGTCTGTCTGTCTAAGACTGAACCTATGAGTTCATaGGTGCTGAGAATGGACTCTATCAACCTACGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SVCLSKTEPMSS*VLRMDSINLRP Trigger: GGGCCGTAGGTTGATAGAGTCCATTCTCAGCACGCATGAACTCATAGGTTCAGTCTTAGACAGACAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGGAAACTTGCTTTAGATCTAGAGTCTGCTCTAATCTGAACCCTTCACACTGCTTTTGCATGGCCTaGGTGAGGGAAAGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ELETCFRSRVCSNLNPSHCFCMA*VRESGE Trigger: TTCTCCACTTTCCCTCACCAAGGCCATGCAAAAGCA...GTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | CTATCAACCTACGGCCCAGCCAAGGATTCAGATTCCTaGTCACAGCCATTTCTTTGCAACATGTGGACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSTYGPAKDSDS*SQPFLCNMWTQ Trigger: TTGAGTCCACATGTTGCAAAGAAATGGCTGTGATCAGGAATCTGAATCCTTGGCTGGGCCGTAGGTTGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | GGTAGCATCCCCCTAGTTCTTGCAGAGCTGGAAACTTaGTTTAGATCTAGAGTCTGCTCTAATCTGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSIPLVLAELET*FRSRVCSNLNP Trigger: AGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTCTGCAAGAACTAGGGGGATGCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTGGCAACATCAAGTGGGAAGCAAACTTTGAATCTTCTCTTTTCTCTCTCCCACACAGAAGACTCTaGACTGAGTTCTCCCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: TVGNIKWEANFESSLFSLPHRRL*TEFSPS Trigger: CGAAGGGGAGAACTCAGTCAAGAGTCTTCTGTGTGG...GAGAGAGAAAAGAGAAGATTCAAAGTTTGCTTCCCACTTGATGTTGCCAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGGAAACTTGCTTTAGATCTAGAGTCTGCTCTAATCTGAACCCTTCACACCAGGAGATCCATGTATaGGGCTCCTACCAAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ELETCFRSRVCSNLNPSHQEIHV*GSYQIL Trigger: CAAGATTTGGTAGGAGCCCAATACATGGATCTCCTG...GTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | CACGTCCTCTTAGTCCTCTCTAATAGCTCCTTCTCCTaGTTAGGTTCATTTGTAAAGACTGAACCAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: HVLLVLSNSSFS*LGSFVKTEPEP Trigger: GGGTTCTGGTTCAGTCTTTACAAATGAACCTAAGCAGGAGAAGGAGCTATTAGAGAGGACTAAGAGGACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR GCA 72 bp | CTTGCAGAGCTGGAAACTTGCTTTAGATCTAGAGTCTaGTCTAATCTGAACCCTTCACACTCGAATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LAELETCFRSRV*SNLNPSHSNPE Trigger: TTCTGGATTCGAGTGTGAAGGGTTCAGATTAGAGCAGACTCTAGATCTAAAGCAAGTTTCCAGCTCTGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CCA 72 bp | TCTGACGGATCGCATTGCACAGTTGGCAACATCAAGTaGGAAGCAAACTTTGAATCTTCTCTTTTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SDGSHCTVGNIK*EANFESSLFSL Trigger: GAGAGAGAAAAGAGAAGATTCAAAGTTTGCTTCCCACTTGATGTTGCCAACTGTGCAATGCGATCCGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR TCA 72 bp | CTGAGTTCAACCTGTACCACACATCACACAAAAACATaGGAAGAGTTCTCTAAACAGCCTGACTTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSTCTTHHTKT*EEFSKQPDLLK Trigger: CTTCAGCAAGTCAGGCTGTTTAGAGAACTCTTCTCATGTTTTTGTGTGATGTGTGGTACAGGTTGAACTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTGGCAACATCAAGTGGGAAGCAAACTTTGAATCTTCTCTTTTCTCTCTCAAAGGAAGCCACAGCTaGTGCAGAGTCTGGATAATT | + |
|
Preference number: 3 (lower is better) Translates to: TVGNIKWEANFESSLFSLKGSHS*CRVWII Trigger: AATTATCCAGACTCTGCACAAGCTGTGGCTTCCTTT...GAGAGAGAAAAGAGAAGATTCAAAGTTTGCTTCCCACTTGATGTTGCCAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | GAAGAGCTCCCCTTTCTCGGGAAGAGCTTCCTGCTGTaGCCCGCACTGCAGGCTTCTGGAATGAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EELPFLGKSFLL*PALQASGMKVS Trigger: GGACACCTTCATTCCAGAAGCCTGCAGTGCGGGCAACAGCAGGAAGCTCTTCCCGAGAAAGGGGAGCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | GGTTATCAGAAAGGGGCTAGGCTGGCCATGCCAGCTTaGAGACTGCCTAGAGCTCAGGAGCCTGAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYQKGARLAMPA*RLPRAQEPEGL Trigger: CAAGCCTTCAGGCTCCTGAGCTCTAGGCAGTCTCAAAGCTGGCATGGCCAGCCTAGCCCCTTTCTGATAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | TCTCTCTGCCTGAACATGCTCTGTTCCAGTCCCATCTaGAGGAGTCATGAGCTCCAGGGCCTGTGTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLNMLCSSPI*RSHELQGLCHT Trigger: AGTGTGACACAGGCCCTGGAGCTCATGACTCCTCAAGATGGGACTGGAACAGAGCATGTTCAGGCAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | GGCCCTTACATGGTGTCCCTGTGGAATTTTGCTGCATaGCTCAACCAGAAAGGTACCAGACTCCCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPYMVSLWNFAA*LNQKGTRLPPA Trigger: TGCTGGTGGGAGTCTGGTACCTTTCTGGTTGAGCAATGCAGCAAAATTCCACAGGGACACCATGTAAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | TATGGCCTAGGTAAGACCAGGACAGGGATACCAGCCTaGAACAAGAGATCCCAGCCTGGCCAATACACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YGLGKTRTGIPA*NKRSQPGQYTK Trigger: CTTGGTGTATTGGCCAGGCTGGGATCTCTTGTTCAAGGCTGGTATCCCTGTCCTGGTCTTACCTAGGCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | CTGCCAGATTTTTACGTCCTCAACCTGTGGTCAAACTaGCCTTGCCCTGTGTTGTCTGACGGATCGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPDFYVLNLWSN*PCPVLSDGSHC Trigger: GCAATGCGATCCGTCAGACAACACAGGGCAAGGCAAGTTTGACCACAGGTTGAGGACGTAAAAATCTGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | AGGAGATCCATGTATTGGGCTCCTACCAAATCTTGCTaGGTGGGAAATGCCTATGGCCTAGGTAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSMYWAPTKSC*VGNAYGLGKTR Trigger: CCTGGTCTTACCTAGGCCATAGGCATTTCCCACCAAGCAAGATTTGGTAGGAGCCCAATACATGGATCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | AGCCCCAAACCACTTTCTCTAGGCCTCAAGCGACTGTaGAAATCCTGGTTTGGCCATCTTAGAAGAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPKPLSLGLKRL*KSWFGHLRRAE Trigger: TTCTGCTCTTCTAAGATGGCCAAACCAGGATTTCAACAGTCGCTTGAGGCCTAGAGAAAGTGGTTTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | TCAACAAAGCAACTAGGAAGAATCATGGCTGGCCCTTaGAGGCCTCAAGAGGAATGGTTGACCTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STKQLGRIMAGP*RPQEEWLTWVS Trigger: AGAAACCCAGGTCAACCATTCCTCTTGAGGCCTCAAAGGGCCAGCCATGATTCTTCCTAGTTGCTTTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | CAGGAAATGTTTGTTGTATCAAAAGGAAGCCACAGCTaGTGCAGAGTCTGGATAATTCACCAGACGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEMFVVSKGSHS*CRVWIIHQTWA Trigger: GGCCCACGTCTGGTGAATTATCCAGACTCTGCACAAGCTGTGGCTTCCTTTTGATACAACAAACATTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | CTTGCCCTGTGTTGTCTGACGGATCGCATTGCACAGTaGGCAACATCAAGTGGGAAGCAAACTTTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LALCCLTDRIAQ*ATSSGKQTLNL Trigger: AAGATTCAAAGTTTGCTTCCCACTTGATGTTGCCAACTGTGCAATGCGATCCGTCAGACAACACAGGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| 3UTR CAA 72 bp | CTGGATTACTGGGAGAAGATGCTCAGGAAATGTTTGTaGTATCAAAAGGAAGCCACAGCTTGTGCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDYWEKMLRKCL*YQKEATACAES Trigger: AGACTCTGCACAAGCTGTGGCTTCCTTTTGATACAACAAACATTTCCTGAGCATCTTCTCCCAGTAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.9 |
||
| CDS CCA 90 bp | GCCCTGGCCCAGTTTCTGCTGACCACCCTCTTCTCACCGGGAACCTaGCTGATGGTGACCGTGAGGCTGTCGGGTTGGAGGAGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALAQFLLTTLFSPGT*LMVTVRLSGWRSPG Trigger: TCCAGGGCTCCTCCAACCCGACAGCCTCACGGTCACCATCAGCCAGGTTCCCGGTGAGAAGAGGGTGGTCAGCAGAAACTGGGCCAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | GGACTTGGCTTTGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGTaGGTTTCTGTGCCGGGCAAGGCGGGCCAGGTCAATCTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGFVQVPRAAPVTL*VSVPGKAGQVNLLS Trigger: AGAGAGCAGATTGACCTGGCCCGCCTTGCCCGGCACAGAAACCCACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | GCTGCCCATGGCCAGGTCCCTGTCCCTAGGCTTGTGGCAGTTCTGTaGCATGGACTTGGCTTTGTCCAGGTCCCACGGGCGGCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAHGQVPVPRLVAVL*HGLGFVQVPRAAPV Trigger: GACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAGGGACAGGGACCTGGCCATGGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | CTGGACTCCGGGGCTCCAGAACACCCTTCCCTGCTGAATCTGAGCTaGAAGTCATCTGCAAGGGTGCACGCCAGCTCCGGCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSGAPEHPSLLNLS*KSSARVHASSGLLQ Trigger: CTGGAGGAGGCCGGAGCTGGCGTGCACCCTTGCAGATGACTTCCAGCTCAGATTCAGCAGGGAAGGGTGTTCTGGAGCCCCGGAGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | TTGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGTGGGTTTCTGTaGCGGGCAAGGCGGGCCAGGTCAATCTGCTCTCTCTCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSHGRLQSPCGFL*RARRARSICSLSCF Trigger: GAAACAAGAGAGAGAGCAGATTGACCTGGCCCGCCTTGCCCGGCACAGAAACCCACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 90 bp | GCCAGCCCTGTCCTCCATGGGCTCTGGGGTCTGTGCTTTCCTCTGTaGCTCAGTGCAACTGTGGACTTCCAGCCCAGGCTGGTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASPVLHGLWGLCFPL*LSATVDFQPRLVVS Trigger: ACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACAGAGGAAAGCACAGACCCCAGAGCCCATGGAGGACAGGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | ACCTTCGGGCCCTGCCAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTaGCTATGGTGGATGTCATCGAGGGTCTTCCAGATTGTCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: TFGPCQLASPSPGRC*LWWMSSRVFQIVHP Trigger: GGGGTGGACAATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | ATGGGCTCTGGGGTCTGTGCTTTCCTCTGTGACTCAGTGCAACTGTaGACTTCCAGCCCAGGCTGGTGGTCAGTGCACCCCAGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MGSGVCAFLCDSVQL*TSSPGWWSVHPRVC Trigger: GCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACAGAGGAAAGCACAGACCCCAGAGCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 90 bp | GATTGTCCACCCCGACATTTTCCATCCAGGGATGATGGTGGGTGCTaGGGCTTCTGGTGGGTCCTAGGACCCTTCCTGCTGCCCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DCPPRHFPSRDDGGC*GFWWVLGPFLLPMA Trigger: GGCCATGGGCAGCAGGAAGGGTCCTAGGACCCACCAGAAGCCTCAGCACCCACCATCATCCCTGGATGGAAAATGTCGGGGTGGACAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | CGCAAGGCAACTATCCTACGGTCCAGCTCGGCATCTTTTTCCTCATaGCGGCGCATTGTGGACTCGGCTTTGTGGGGCCCGGCCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: RKATILRSSSASFSS*RRIVDSALWGPAKC Trigger: GCATTTGGCCGGGCCCCACAAAGCCGAGTCCACAATGCGCCGGCATGAGGAAAAAGATGCCGAGCTGGACCGTAGGATAGTTGCCTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | TGTCCTCCATGGGCTCTGGGGTCTGTGCTTTCCTCTGTGACTCAGTaGAACTGTGGACTTCCAGCCCAGGCTGGTGGTCAGTGCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPPWALGSVLSSVTQ*NCGLPAQAGGQCTP Trigger: TGGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACAGAGGAAAGCACAGACCCCAGAGCCCATGGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | GGGCCCTGCCAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTGCCTATaGTGGATGTCATCGAGGGTCTTCCAGATTGTCCACCCCGACATT | + |
|
Preference number: 5 (lower is better) Translates to: GPCQLASPSPGRCCL*WMSSRVFQIVHPDI Trigger: AATGTCGGGGTGGACAATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | GTGACTCAGTGCAACTGTGGACTTCCAGCCCAGGCTGGTGGTCAGTaGACCCCAGGGTCTGCTGCTCAGAACCATTTGGCCATGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: VTQCNCGLPAQAGGQ*TPGSAAQNHLAMTL Trigger: CAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | CTCCGGCCTCCTCCAGATGTCCCCTTTGCCCTTGGGCTCCGCGCTTaGGTCGTGGGTTTCTCACTTACTATCCTTTTGGCCTTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRPPPDVPFALGLRA*VVGFSLTILLALAL Trigger: CAAAGCCAAGGCCAAAAGGATAGTAAGTGAGAAACCCACGACCCAAGCGCGGAGCCCAAGGGCAAAGGGGACATCTGGAGGAGGCCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | GGCTCTGCAGCATCTCATCTTCTTTCATGTCATACCTTCGGGCCCTaGCAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTGCCTATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSAASHLLSCHTFGP*QLASPSPGRCCLWW Trigger: CCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGTATGACATGAAAGAAGATGAGATGCTGCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | GGTGACAGCAAGTTCCACCCGGTGCCCCATGCTGAAAGTACCCGGTaGGTCTGCAGCATCTTCATCATCTGTCAGTGTGGTAGTCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDSKFHPVPHAESTR*VCSIFIICQCGSHS Trigger: GGAGTGACTACCACACTGACAGATGATGAAGATGCTGCAGACGCACCGGGTACTTTCAGCATGGGGCACCGGGTGGAACTTGCTGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 90 bp | TCTGCACTGGGAGTCTTCGTGCTGCTCTGGCTTCCCTCCTGGCTCTaGAGCATCTCATCTTCTTTCATGTCATACCTTCGGGCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SALGVFVLLWLPSWL*SISSSFMSYLRALP Trigger: TGGCAGGGCCCGAAGGTATGACATGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | TTCATGTCATACCTTCGGGCCCTGCCAGTTAGCCTCTCCTTCCCCTaGGCGTTGCTGCCTATGGTGGATGTCATCGAGGGTCTTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FMSYLRALPVSLSFP*ALLPMVDVIEGLPD Trigger: ATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGTATGACATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 90 bp | TGCCGACGATCTTCCTCGATCTCCTGGTACCTTCGTAGTAAGGCCTaGTTCTTCTTGCGCAAGGCAACTATCCTACGGTCCAGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRRSSSISWYLRSKA*FFLRKATILRSSSA Trigger: TGCCGAGCTGGACCGTAGGATAGTTGCCTTGCGCAAGAAGAACCAGGCCTTACTACGAAGGTACCAGGAGATCGAGGAAGATCGTCGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 90 bp | TCTTCCTCTGCACTGGGAGTCTTCGTGCTGCTCTGGCTTCCCTCCTaGCTCTGCAGCATCTCATCTTCTTTCATGTCATACCTTCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSALGVFVLLWLPS*LCSISSSFMSYLRA Trigger: GGCCCGAAGGTATGACATGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 90 bp | TCCGCTTCTGTACGAATTCTTCCTCTGCACTGGGAGTCTTCGTGCTaGTCTGGCTTCCCTCCTGGCTCTGCAGCATCTCATCTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SASVRILPLHWESSC*SGFPPGSAASHLLS Trigger: TGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGAGGAAGAATTCGTACAGAAGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 90 bp | AGGGTCTGCTGCTCAGAACCATTTGGCCATGACACTGGACTTTGCTaGGCCCCAGCCTTTGGACCGAGTATACATGTACTTTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVCCSEPFGHDTGLC*APAFGPSIHVLFPG Trigger: GCCTGGAAAAAGTACATGTATACTCGGTCCAAAGGCTGGGGCTCAGCAAAGTCCAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 90 bp | CTTCCTCGATCTCCTGGTACCTTCGTAGTAAGGCCTGGTTCTTCTTaGGCAAGGCAACTATCCTACGGTCCAGCTCGGCATCTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRSPGTFVVRPGSS*ARQLSYGPARHLFP Trigger: AGGAAAAAGATGCCGAGCTGGACCGTAGGATAGTTGCCTTGCGCAAGAAGAACCAGGCCTTACTACGAAGGTACCAGGAGATCGAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 90 bp | TTCTGTACGAATTCTTCCTCTGCACTGGGAGTCTTCGTGCTGCTCTaGCTTCCCTCCTGGCTCTGCAGCATCTCATCTTCTTTCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCTNSSSALGVFVLL*LPSWLCSISSSFMS Trigger: TGACATGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGAGGAAGAATTCGTACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | TCCCACGGGCGGCTCCAGTCACCCTGTGGGTTTCTGTaGCGGGCAAGGCGGGCCAGGTCAATCTGCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHGRLQSPCGFL*RARRARSICSL Trigger: GAGAGAGCAGATTGACCTGGCCCGCCTTGCCCGGCACAGAAACCCACAGGGTGACTGGAGCCGCCCGTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | TCCCAGCTGGCCTCAGGGGACAGCCCCAAGGACTGTTaGGGAGGTGGACTTGAGACCACGCCTGGACTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLASGDSPKDC*GGGLETTPGLR Trigger: CCGGAGTCCAGGCGTGGTCTCAAGTCCACCTCCCCAACAGTCCTTGGGGCTGTCCCCTGAGGCCAGCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | TTTGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGTaGGTTTCTGTGCCGGGCAAGGCGGGCCAGGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FVQVPRAAPVTL*VSVPGKAGQVN Trigger: ATTGACCTGGCCCGCCTTGCCCGGCACAGAAACCCACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | GCCAGGTCCCTGTCCCTAGGCTTGTGGCAGTTCTGTGGCATGGACTaGGCTTTGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARSLSLGLWQFCGMD*ALSRSHGRLQSPCG Trigger: CCCACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAGGGACAGGGACCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | GGCCAGGTCCCTGTCCCTAGGCTTGTGGCAGTTCTGTaGCATGGACTTGGCTTTGTCCAGGTCCCACGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GQVPVPRLVAVL*HGLGFVQVPRA Trigger: CGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAGGGACAGGGACCTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CAA 90 bp | GTTTCTGTGCCGGGCAAGGCGGGCCAGGTCAATCTGCTCTCTCTCTaGTTTCCACTGCGTGTAGTCCCAGCTGGCCTCAGGGGACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSVPGKAGQVNLLSL*FPLRVVPAGLRGQP Trigger: GGGCTGTCCCCTGAGGCCAGCTGGGACTACACGCAGTGGAAACAAGAGAGAGAGCAGATTGACCTGGCCCGCCTTGCCCGGCACAGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 72 bp | GGGGCTCCAGAACACCCTTCCCTGCTGAATCTGAGCTaGAAGTCATCTGCAAGGGTGCACGCCAGCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPEHPSLLNLS*KSSARVHASSG Trigger: GCCGGAGCTGGCGTGCACCCTTGCAGATGACTTCCAGCTCAGATTCAGCAGGGAAGGGTGTTCTGGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CAA 72 bp | CGGGCCCTGCCAGTTAGCCTCTCCTTCCCCTGGGCGTaGCTGCCTATGGTGGATGTCATCGAGGGTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RALPVSLSFPWA*LPMVDVIEGLP Trigger: TGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CAA 90 bp | TCCCTGTCCCTAGGCTTGTGGCAGTTCTGTGGCATGGACTTGGCTTaGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGTGGGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLGLWQFCGMDLA*SRSHGRLQSPCGFL Trigger: CAGAAACCCACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAGGGACAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 72 bp | TGCAACTGTGGACTTCCAGCCCAGGCTGGTGGTCAGTaGACCCCAGGGTCTGCTGCTCAGAACCATTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CNCGLPAQAGGQ*TPGSAAQNHLA Trigger: GGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 72 bp | CAGTTTCTGCTGACCACCCTCTTCTCACCGGGAACCTaGCTGATGGTGACCGTGAGGCTGTCGGGTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QFLLTTLFSPGT*LMVTVRLSGWR Trigger: CCTCCAACCCGACAGCCTCACGGTCACCATCAGCCAGGTTCCCGGTGAGAAGAGGGTGGTCAGCAGAAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 72 bp | TACCTTCGGGCCCTGCCAGTTAGCCTCTCCTTCCCCTaGGCGTTGCTGCCTATGGTGGATGTCATCGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: YLRALPVSLSFP*ALLPMVDVIEG Trigger: ACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CCA 72 bp | GGGGTCTGTGCTTTCCTCTGTGACTCAGTGCAACTGTaGACTTCCAGCCCAGGCTGGTGGTCAGTGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: GVCAFLCDSVQL*TSSPGWWSVHP Trigger: GGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACAGAGGAAAGCACAGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CAA 72 bp | CTAGGCTTGTGGCAGTTCTGTGGCATGGACTTGGCTTaGTCCAGGTCCCACGGGCGGCTCCAGTCACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGLWQFCGMDLA*SRSHGRLQSPC Trigger: ACAGGGTGACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS CAA 72 bp | CTGTCCCTAGGCTTGTGGCAGTTCTGTGGCATGGACTaGGCTTTGTCCAGGTCCCACGGGCGGCTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLGLWQFCGMD*ALSRSHGRLQS Trigger: TGACTGGAGCCGCCCGTGGGACCTGGACAAAGCCAAGTCCATGCCACAGAACTGCCACAAGCCTAGGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 72 bp | CCCCGACATTTTCCATCCAGGGATGATGGTGGGTGCTaGGGCTTCTGGTGGGTCCTAGGACCCTTCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRHFPSRDDGGC*GFWWVLGPFLL Trigger: CAGCAGGAAGGGTCCTAGGACCCACCAGAAGCCTCAGCACCCACCATCATCCCTGGATGGAAAATGTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 72 bp | GCACCCCAGGGTCTGCTGCTCAGAACCATTTGGCCATaGCACTGGACTTTGCTGAGCCCCAGCCTTTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: APQGLLLRTIWP*HWTLLSPSLWT Trigger: GGTCCAAAGGCTGGGGCTCAGCAAAGTCCAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS TCA 72 bp | GTCCTCCATGGGCTCTGGGGTCTGTGCTTTCCTCTGTaGCTCAGTGCAACTGTGGACTTCCAGCCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLHGLWGLCFPL*LSATVDFQPRL Trigger: CAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACAGAGGAAAGCACAGACCCCAGAGCCCATGGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 72 bp | ACTATCCTACGGTCCAGCTCGGCATCTTTTTCCTCATaGCGGCGCATTGTGGACTCGGCTTTGTGGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TILRSSSASFSS*RRIVDSALWGP Trigger: CGGGCCCCACAAAGCCGAGTCCACAATGCGCCGGCATGAGGAAAAAGATGCCGAGCTGGACCGTAGGATAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
||
| CDS GCA 72 bp | ACACCCTTCCCTGCTGAATCTGAGCTGGAAGTCATCTaGAAGGGTGCACGCCAGCTCCGGCCTCCTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TPFPAESELEVI*KGARQLRPPPD Trigger: ATCTGGAGGAGGCCGGAGCTGGCGTGCACCCTTGCAGATGACTTCCAGCTCAGATTCAGCAGGGAAGGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | AGCCCAGGCTGGTGGTCAGTGCACCCCAGGGTCTGCTaGTCAGAACCATTTGGCCATGACACTGGACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SPGWWSVHPRVC*SEPFGHDTGLC Trigger: GCAAAGTCCAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | TCCAGCCCAGGCTGGTGGTCAGTGCACCCCAGGGTCTaGTGCTCAGAACCATTTGGCCATGACACTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: SSPGWWSVHPRV*CSEPFGHDTGL Trigger: AAGTCCAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | TGTGACTCAGTGCAACTGTGGACTTCCAGCCCAGGCTaGTGGTCAGTGCACCCCAGGGTCTGCTGCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CDSVQLWTSSPG*WSVHPRVCCSE Trigger: TTCTGAGCAGCAGACCCTGGGGTGCACTGACCACCAGCCTGGGCTGGAAGTCCACAGTTGCACTGAGTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 72 bp | GGTCAGTGCACCCCAGGGTCTGCTGCTCAGAACCATTaGGCCATGACACTGGACTTTGCTGAGCCCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GQCTPGSAAQNH*AMTLDFAEPQP Trigger: AGGCTGGGGCTCAGCAAAGTCCAGTGTCATGGCCAAATGGTTCTGAGCAGCAGACCCTGGGGTGCACTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | GCTCCGGCCTCCTCCAGATGTCCCCTTTGCCCTTGGGCTCCGCGCTaGGGTCGTGGGTTTCTCACTTACTATCCTTTTGGCCTTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: APASSRCPLCPWAPR*GRGFLTYYPFGLGF Trigger: AAAGCCAAGGCCAAAAGGATAGTAAGTGAGAAACCCACGACCCAAGCGCGGAGCCCAAGGGCAAAGGGGACATCTGGAGGAGGCCGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | TCATACCTTCGGGCCCTGCCAGTTAGCCTCTCCTTCCCCTGGGCGTaGCTGCCTATGGTGGATGTCATCGAGGGTCTTCCAGATTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SYLRALPVSLSFPWA*LPMVDVIEGLPDCP Trigger: TGGACAATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGTATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | CCCTGCCAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTaGCTATGGTGGATGTCATCGAGGGTCTTCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: PCQLASPSPGRC*LWWMSSRVFQI Trigger: AATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | CCTCCAGATGTCCCCTTTGCCCTTGGGCTCCGCGCTTaGGTCGTGGGTTTCTCACTTACTATCCTTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPDVPFALGLRA*VVGFSLTILLA Trigger: GGCCAAAAGGATAGTAAGTGAGAAACCCACGACCCAAGCGCGGAGCCCAAGGGCAAAGGGGACATCTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | TTAGCCTCTCCTTCCCCTGGGCGTTGCTGCCTATGGTaGATGTCATCGAGGGTCTTCCAGATTGTCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: LASPSPGRCCLW*MSSRVFQIVHP Trigger: GGGGTGGACAATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | CCCCTCTGGGGAGGCTGGAATTGGGCTGGTTGCAGGCACGGTCTCTaGTCTGTCTGGCTCCCTTTCATTCCGCTTCTGTACGAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLWGGWNWAGCRHGL*SVWLPFIPLLYEFF Trigger: GAAGAATTCGTACAGAAGCGGAATGAAAGGGAGCCAGACAGACAAGAGACCGTGCCTGCAACCAGCCCAATTCCAGCCTCCCCAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS TCA 72 bp | TCCAGATTGTCCACCCCGACATTTTCCATCCAGGGATaGTGGTGGGTGCTGAGGCTTCTGGTGGGTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SRLSTPTFSIQG*WWVLRLLVGPR Trigger: CCTAGGACCCACCAGAAGCCTCAGCACCCACCATCATCCCTGGATGGAAAATGTCGGGGTGGACAATCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | GCTTTGTTTTCCATGGTGACAGCAAGTTCCACCCGGTaGCCCATGCTGAAAGTACCCGGTGCGTCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALFSMVTASSTR*PMLKVPGASAA Trigger: TGCTGCAGACGCACCGGGTACTTTCAGCATGGGGCACCGGGTGGAACTTGCTGTCACCATGGAAAACAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | GCATCTCATCTTCTTTCATGTCATACCTTCGGGCCCTaGCAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASHLLSCHTFGP*QLASPSPGRCC Trigger: GCAGCAACGCCCAGGGGAAGGAGAGGCTAACTGGCAGGGCCCGAAGGTATGACATGAAAGAAGATGAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | CAGTTAGCCTCTCCTTCCCCTGGGCGTTGCTGCCTATaGTGGATGTCATCGAGGGTCTTCCAGATTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QLASPSPGRCCL*WMSSRVFQIVH Trigger: GTGGACAATCTGGAAGACCCTCGATGACATCCACCATAGGCAGCAACGCCCAGGGGAAGGAGAGGCTAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 72 bp | TCCTCCAGATGTCCCCTTTGCCCTTGGGCTCCGCGCTaGGGTCGTGGGTTTCTCACTTACTATCCTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSRCPLCPWAPR*GRGFLTYYPFG Trigger: GCCAAAAGGATAGTAAGTGAGAAACCCACGACCCAAGCGCGGAGCCCAAGGGCAAAGGGGACATCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | CTCCGCGCTTGGGTCGTGGGTTTCTCACTTACTATCCTTTTGGCCTaGGCTTTGTTTTCCATGGTGACAGCAAGTTCCACCCGGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LRAWVVGFSLTILLA*ALFSMVTASSTRCP Trigger: GGGGCACCGGGTGGAACTTGCTGTCACCATGGAAAACAAAGCCAAGGCCAAAAGGATAGTAAGTGAGAAACCCACGACCCAAGCGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | GTACGAATTCTTCCTCTGCACTGGGAGTCTTCGTGCTaGTCTGGCTTCCCTCCTGGCTCTGCAGCATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VRILPLHWESSC*SGFPPGSAASH Trigger: ATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGAGGAAGAATTCGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 72 bp | GCCTTTGGACCGAGTATACATGTACTTTTTCCAGGCTaGCGGCTGCTAGCTCCTCCCACAGAGAGGTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AFGPSIHVLFPG*RLLAPPTERSR Trigger: CCTCGACCTCTCTGTGGGAGGAGCTAGCAGCCGCAAGCCTGGAAAAAGTACATGTATACTCGGTCCAAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | TCTCCTGGTACCTTCGTAGTAAGGCCTGGTTCTTCTTaGGCAAGGCAACTATCCTACGGTCCAGCTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SPGTFVVRPGSS*ARQLSYGPARH Trigger: ATGCCGAGCTGGACCGTAGGATAGTTGCCTTGCGCAAGAAGAACCAGGCCTTACTACGAAGGTACCAGGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | GGAGTCTTCGTGCTGCTCTGGCTTCCCTCCTGGCTCTaGAGCATCTCATCTTCTTTCATGTCATACCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: GVFVLLWLPSWL*SISSSFMSYLR Trigger: CCGAAGGTATGACATGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS GCA 72 bp | CTCCCTTTCATTCCGCTTCTGTACGAATTCTTCCTCTaGACTGGGAGTCTTCGTGCTGCTCTGGCTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPFIPLLYEFFL*TGSLRAALASL Trigger: GAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGCAGAGGAAGAATTCGTACAGAAGCGGAATGAAAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | GCACTGGGAGTCTTCGTGCTGCTCTGGCTTCCCTCCTaGCTCTGCAGCATCTCATCTTCTTTCATGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: ALGVFVLLWLPS*LCSISSSFMSY Trigger: GTATGACATGAAAGAAGATGAGATGCTGCAGAGCCAGGAGGGAAGCCAGAGCAGCACGAAGACTCCCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | TCTTCCTCGATCTCCTGGTACCTTCGTAGTAAGGCCTaGTTCTTCTTGCGCAAGGCAACTATCCTACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSISWYLRSKA*FFLRKATILRS Trigger: GGACCGTAGGATAGTTGCCTTGCGCAAGAAGAACCAGGCCTTACTACGAAGGTACCAGGAGATCGAGGAAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CAA 90 bp | TCTTCCTCGATCTCCTGGTACCTTCGTAGTAAGGCCTGGTTCTTCTaGCGCAAGGCAACTATCCTACGGTCCAGCTCGGCATCTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSISWYLRSKAWFF*RKATILRSSSASFS Trigger: GGAAAAAGATGCCGAGCTGGACCGTAGGATAGTTGCCTTGCGCAAGAAGAACCAGGCCTTACTACGAAGGTACCAGGAGATCGAGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS CCA 72 bp | AATTGGGCTGGTTGCAGGCACGGTCTCTTGTCTGTCTaGCTCCCTTTCATTCCGCTTCTGTACGAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NWAGCRHGLLSV*LPFIPLLYEFF Trigger: GAAGAATTCGTACAGAAGCGGAATGAAAGGGAGCCAGACAGACAAGAGACCGTGCCTGCAACCAGCCCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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| CDS TCA 72 bp | TGCTCAGAACCATTTGGCCATGACACTGGACTTTGCTaGGCCCCAGCCTTTGGACCGAGTATACATGTACTT | + |
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Preference number: 6 (lower is better) Translates to: CSEPFGHDTGLC*APAFGPSIHVL Trigger: AAGTACATGTATACTCGGTCCAAAGGCTGGGGCTCAGCAAAGTCCAGTGTCATGGCCAAATGGTTCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059997.10 |
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