Pregenerated sensors for CCDC97 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002608Ensembl transcript IDs: ENSMUST00000002683.3, ENSMUST00000125699.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATCCATGGGCGTGAACAAGGGTGGGGAGGCATGGAGGGTAAGGTaGGAGCTTGGGGGAAGCAAGAGGGCCCTGCGTAGGACACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: GSMGVNKGGEAWRVR*ELGGSKRALRRTLA Trigger: TGCCAGTGTCCTACGCAGGGCCCTCTTGCTTCCCCCAAGCTCCCACCTTACCCTCCATGCCTCCCCACCCTTGTTCACGCCCATGGATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 90 bp | GAGAGTCCCCCTCTTCAAGTTCCTCCCACACTCAAGCTGGCCCTGTaGTACCCAGCCCTGCCTCTGCCGGCACTCCCAGCTAGTGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: ESPPLQVPPTLKLAL*YPALPLPALPASVQ Trigger: TTGGACACTAGCTGGGAGTGCCGGCAGAGGCAGGGCTGGGTACCACAGGGCCAGCTTGAGTGTGGGAGGAACTTGAAGAGGGGGACTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 90 bp | TTCAAGTTCCTCCCACACTCAAGCTGGCCCTGTGGTACCCAGCCCTaGCTCTGCCGGCACTCCCAGCTAGTGTCCAAAAAGGAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: FKFLPHSSWPCGTQP*LCRHSQLVSKKEQQ Trigger: CTGCTGCTCCTTTTTGGACACTAGCTGGGAGTGCCGGCAGAGGCAGGGCTGGGTACCACAGGGCCAGCTTGAGTGTGGGAGGAACTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 90 bp | ACTGGCCAAGTGTGTTCCAGTCTTGGTTCTGCATGGGAGACCAGGTaGTCTCAAGATGCAAATGGCTACTTCTGGGTTCTTTCCATCCTT | + |
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Preference number: 1 (lower is better) Translates to: TGQVCSSLGSAWETR*SQDANGYFWVLSIL Trigger: AAGGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAACACACTTGGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 90 bp | GTGTTCCAGTCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATaGAAATGGCTACTTCTGGGTTCTTTCCATCCTTTGAGACAAGTG | + |
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Preference number: 1 (lower is better) Translates to: VFQSWFCMGDQVVSR*KWLLLGSFHPLRQV Trigger: CACTTGTCTCAAAGGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGAGGAGCAGCAGAGGCTaGTGCCACCTGGGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRRSSRG*CHLGSP Trigger: AGGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCT...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGAAGAGAAAAGACAGGTaGGGCCAGAGCCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRKRKDR*GQSQRS Trigger: GCTCCTCTGGCTCTGGCCCCACCTGTCTTTTCTCTT...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGCCCTGCGTAGGACACTaGCAGAGAGAGGTGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRPCVGH*QREVEK Trigger: TTTCTCCACCTCTCTCTGCCAGTGTCCTACGCAGGG...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCTAGTGTCCAAAAAGGAGCAGCAGAGGCTGGTGCCACCTGGGTTCCCCCTTGGCTGCCAGGCCTaGGGAGGGGGACCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQLVSKKEQQRLVPPGFPLGCQA*GGGPRE Trigger: CTCTCTGGGTCCCCCTCCCCAGGCCTGGCAGCCAAG...GGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCTTTTTGGACACTAGCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR TCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGCAGAGCAGTAAAGGCTaGGAAAGAGGGGCAGACATC | + |
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Preference number: 2 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRQSSKG*ERGADI Trigger: GATGTCTGCCCCTCTTTCTCAGCCTTTACTGCTCTG...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGGATCCCAGCTGGGGACTCACTGCGTCCTCTGGGGAGGTAAGGGTAGGAGCAGCAGAGGCTGGTaGCACCTGGGTTCCCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: VVGSQLGTHCVLWGGKGRSSRGW*HLGSPN Trigger: GTTAGGGGAACCCAGGTGGCACCAGCCTCTGCTGCT...CCTACCCTTACCTCCCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTAGGGCGTCTGGGTTCCCACAGGCCATGGCTGAGTCACAGGCAGCCATCGGGCGTGAACAAGGGTaGGGAGGCATGGAGGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: EGRASGFPQAMAESQAAIGREQG*GGMEGK Trigger: CTTACCCTCCATGCCTCCCCACCCTTGTTCACGCCC...GATGGCTGCCTGTGACTCAGCCATGGCCTGTGGGAACCCAGACGCCCTACCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTAAGGGTAGGGGTATAACAGTCCACCACCTGCCACCATACTGTGTACCATCTGATGCCCTTGGCTaGCAGGCCTGGGGAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGKGRGITVHHLPPYCVPSDALG*QAWGGG Trigger: TCCCCCTCCCCAGGCCTGGCAGCCAAGGGCATCAGA...TGGTACACAGTATGGTGGCAGGTGGTGGACTGTTATACCCCTACCCTTACCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCATCCATGCCGAGGCAGGAGGACTaGGTTTCAGGCCAGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RNSRAALAFWWSWTLASMPRQED*VSGQPW Trigger: CCAAGGCTGGCCTGAAACTCAGTCCTCCTGCCTCGG...CATGGATGCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTAAGGGTAGGGGTATAACAGTCCACCACCTGCCACCATACTGTGTACCACACAGGGAAGGCTTCTaGTGCCCTTGGCTGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGKGRGITVHHLPPYCVPHREGF*CPWLPG Trigger: GCCTGGCAGCCAAGGGCATCAGAAGCCTTCCCTGTG...TGGTACACAGTATGGTGGCAGGTGGTGGACTGTTATACCCCTACCCTTACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGCCACAGCAGTTTGGATTCTCAGGCCCAGACACGCTGGCCTCCATCCCTTAGGAAGCGAGAGGTaGGGCAGTGGCATGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FSATAVWILRPRHAGLHPLGSER*GSGMKG Trigger: TCCCTTCATGCCACTGCCCCACCTCTCGCTTCCTAA...GGGATGGAGGCCAGCGTGTCTGGGCCTGAGAATCCAAACTGCTGTGGCACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR TCA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGGGTGGGGCAGTGGCATaGAGGGAGAAAGTGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRGGAVA*REKVSK Trigger: CTTACTCACTTTCTCCCTTCATGCCACTGCCCCACC...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATGCAAATGGCTACCTGTACACGCAACCTaGGGGCAGCCGAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FQSWFCMGDQVVSRCKWLPVHAT*GQPRQE Trigger: CTCCTGCCTCGGCTGCCCCCAGGTTGCGTGTACAGG...TAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGAGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCTGGGTACAAGGTGGATaGGCAGAGGTTAGACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: EVEKLKSCAGILVELDTSWVQGG*AEVRLR Trigger: CCTAAGTCTAACCTCTGCGCATCCACCTTGTACCCA...GCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGAGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCGTTCCCAGAGAGGAGTaGGAACCCCTAAACACAAGT | + |
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Preference number: 2 (lower is better) Translates to: EVEKLKSCAGILVELDTSVPREE*EPLNTS Trigger: ACTTGTGTTTAGGGGTTCCCACTCCTCTCTGGGAAC...GCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTGAGGCTGGTGCCACCTaGGTTCCCCTAACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: AVLGSFRYGQSRMQPFAIEAGAT*VPLTST Trigger: GGTGGAGGTTAGGGGAACCCAGGTGGCACCAGCCTC...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTCTCAAGCTGGCCCTGTaGTACCCAGCCCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AVLGSFRYGQSRMQPFAILKLAL*YPALPL Trigger: CAGAGGCAGGGCTGGGTACCACAGGGCCAGCTTGAG...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CAA 90 bp | TCTGTGTGTGATGACTCAAGACCCATGATAACAGCCTGTGCGTATTaGGGGAGTGTAAACAGGCGAGGGAGAGGGAGAGGGAGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SVCDDSRPMITACAY*GSVNRRGRGRGRGR Trigger: TCTCCCTCTCCCTCTCCCTCTCCCTCGCCTGTTTACACTCCCCAAATACGCACAGGCTGTTATCATGGGTCTTGAGTCATCACACACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTAAGGGTAGGGGTATAACAGTCCACCACCTGCCACCATACTGTGTACCAACTGGCAGAGAGAGGTaGAGAAACTCAAGAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: GGKGRGITVHHLPPYCVPTGRER*RNSRAA Trigger: CGCAGCTCTTGAGTTTCTCCACCTCTCTCTGCCAGT...TGGTACACAGTATGGTGGCAGGTGGTGGACTGTTATACCCCTACCCTTACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTGAAGCAAGAGGGCCCTaGGTAGGACACTGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AVLGSFRYGQSRMQPFAIEARGP*VGHWQR Trigger: TCTCTGCCAGTGTCCTACGCAGGGCCCTCTTGCTTC...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR TCA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGCATGAAGGGAGAAAGTaGGTAAGAACAAGACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRHEGRK*VRTRQV Trigger: TACCTGTCTTGTTCTTACTCACTTTCTCCCTTCATG...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTAAGGGTAGGGGTATAACAGTCCACCACCTGCCACCATACTGTGTACCAATGGCCAGAGCAGAATaGAGCCATTTGCCATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGKGRGITVHHLPPYCVPMARAE*SHLPFS Trigger: ACTGAATGGCAAATGGCTGCATTCTGCTCTGGCCAT...TGGTACACAGTATGGTGGCAGGTGGTGGACTGTTATACCCCTACCCTTACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATGCAAATGGCTAACCCCTAAACACAAGTaGAGGCATTGTCTGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FQSWFCMGDQVVSRCKWLTPKHK*RHCLRW Trigger: CCACCTCAGACAATGCCTCCACTTGTGTTTAGGGGT...TAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | CATCAAGGCCAGGGGATCCATGGGCGTGAACAAGGGTaGGGAGGCATGGAGGGTAAGGTGGGAGCTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: HQGQGIHGREQG*GGMEGKVGAWG Trigger: CCCCCAAGCTCCCACCTTACCCTCCATGCCTCCCCACCCTTGTTCACGCCCATGGATCCCCTGGCCTTGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 72 bp | CTCCCACACTCAAGCTGGCCCTGTGGTACCCAGCCCTaGCTCTGCCGGCACTCCCAGCTAGTGTCCAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LPHSSWPCGTQP*LCRHSQLVSKK Trigger: CTTTTTGGACACTAGCTGGGAGTGCCGGCAGAGGCAGGGCTGGGTACCACAGGGCCAGCTTGAGTGTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | ACTCCTGGCTCCTGTCCAGTGTGGTGGGATCCCAGCTaGGGACTCACTGCGTCCTCTGGGGAGGTAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: TPGSCPVWWDPS*GLTASSGEVRV Trigger: TACCCTTACCTCCCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCACACTGGACAGGAGCCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | TCCCAAAAGAGCACTCCTGGCTCCTGTCCAGTGTGGTaGGATCCCAGCTGGGGACTCACTGCGTCCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SQKSTPGSCPVW*DPSWGLTASSG Trigger: CCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCACACTGGACAGGAGCCAGGAGTGCTCTTTTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR TCA 72 bp | AGGCATTGTCTGAGGTGGGCCAAGTCTAGAGGGGCCTaGGTCACTAAGCCGGTTTTAGCCAGCGGCCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: RHCLRWAKSRGA*VTKPVLASGLR Trigger: CCGCAGGCCGCTGGCTAAAACCGGCTTAGTGACTCAGGCCCCTCTAGACTTGGCCCACCTCAGACAATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | TTCCCACAGGCCATGGCTGAGTCACAGGCAGCCATCTaGCTTTCATTAGCCCAGGGCAGCAGGGGGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: FPQAMAESQAAI*LSLAQGSRGLC Trigger: ACAGAGCCCCCTGCTGCCCTGGGCTAATGAAAGCCAGATGGCTGCCTGTGACTCAGCCATGGCCTGTGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | AGCTTGGGGGAAGCAAGAGGGCCCTGCGTAGGACACTaGCAGAGAGAGGTGGAGAAACTCAAGAGCTGCGCT | + |
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Preference number: 3 (lower is better) Translates to: SLGEARGPCVGH*QREVEKLKSCA Trigger: AGCGCAGCTCTTGAGTTTCTCCACCTCTCTCTGCCAGTGTCCTACGCAGGGCCCTCTTGCTTCCCCCAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | ACTTCCCAAAAGAGCACTCCTGGCTCCTGTCCAGTGTaGTGGGATCCCAGCTGGGGACTCACTGCGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: TSQKSTPGSCPV*WDPSWGLTASS Trigger: AGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCACACTGGACAGGAGCCAGGAGTGCTCTTTTGGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR TCA 72 bp | ACAGTTGTTAGGGCCCTGCTGTGGGCACAGCACCCGTaGCACAGATGGGTACAAGGTGGATGCGCAGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: TVVRALLWAQHP*HRWVQGGCAEV Trigger: AACCTCTGCGCATCCACCTTGTACCCATCTGTGTCACGGGTGCTGTGCCCACAGCAGGGCCCTAACAACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | AGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTaGACACTAGCATCCATGGGGCAGCTGCAGCCACCA | + |
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Preference number: 3 (lower is better) Translates to: RNSRAALAFWWS*TLASMGQLQPP Trigger: TGGTGGCTGCAGCTGCCCCATGGATGCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 72 bp | GGACACTGGCAGAGAGAGGTGGAGAAACTCAAGAGCTaGGCTGGCATTCTGGTGGAGCTGGACACTAGCATC | + |
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Preference number: 3 (lower is better) Translates to: GHWQREVEKLKS*AGILVELDTSI Trigger: GATGCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTCTCTCTGCCAGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 72 bp | TCCACCACCTGCCACCATACTGTGTACCACAACACCTaGACCTTCTACAGTCCCCCGAGATGGGAGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: STTCHHTVYHNT*TFYSPPRWEEV Trigger: GACTTCCTCCCATCTCGGGGGACTGTAGAAGGTGCAGGTGTTGTGGTACACAGTATGGTGGCAGGTGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | GAATGCAGCCATTTGCCATTCAGTGCCACAGCAGTTTaGATTCTCAGGCCCAGACACGCTGGCCTCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: ECSHLPFSATAV*ILRPRHAGLHP Trigger: GGGATGGAGGCCAGCGTGTCTGGGCCTGAGAATCCAAACTGCTGTGGCACTGAATGGCAAATGGCTGCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | TACCACAACACCTGCACCTTCTACAGTCCCCCGAGATaGGAGGAAGTCTGTCTTCGGATCTCCACCGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: YHNTCTFYSPPR*EEVCLRISTAV Trigger: GACAGCGGTGGAGATCCGAAGACAGACTTCCTCCCATCTCGGGGGACTGTAGAAGGTGCAGGTGTTGTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR TCA 72 bp | GAGGAAGTCTGTCTTCGGATCTCCACCGCTGTCCAATaGGGACACATGGAGGCACACTGGCCAAGTGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: EEVCLRISTAVQ*GHMEAHWPSVF Trigger: GAACACACTTGGCCAGTGTGCCTCCATGTGTCCTCATTGGACAGCGGTGGAGATCCGAAGACAGACTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | AAATACCTAAGCCACAACTTCCCAAAAGAGCACTCCTaGCTCCTGTCCAGTGTGGTGGGATCCCAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KYLSHNFPKEHS*LLSSVVGSQLG Trigger: CCCCAGCTGGGATCCCACCACACTGGACAGGAGCCAGGAGTGCTCTTTTGGGAAGTTGTGGCTTAGGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CAA 90 bp | TGTACCACAACACCTGCACCTTCTACAGTCCCCCGAGATGGGAGGAAGTCTGTCGCCCAGGCTGAGCTGTaGAGGATCTTTCAACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: CTTTPAPSTVPRDGRKSVAQAEL*RIFQQF Trigger: AAACTGTTGAAAGATCCTCAACAGCTCAGCCTGGGC...GACAGACTTCCTCCCATCTCGGGGGACTGTAGAAGGTGCAGGTGTTGTGGTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAGACCAGGTGGTCTCAAGATGCAAATGGCTACTTCTGGGTTCTTTCCATCCTGGCGACCAACAGTCTaGTTTCCAGGTCTGTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: GRPGGLKMQMATSGFFPSWRPTV*FPGLLG Trigger: TCCTAACAGACCTGGAAACAAGACTGTTGGTCGCCA...GGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 72 bp | TTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTaGCATTCAGTGCCACAGCAGTTTGGATTCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: FLQVWPEQNAAI*HSVPQQFGFSG Trigger: GCCTGAGAATCCAAACTGCTGTGGCACTGAATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR CCA 72 bp | GTGTGTTCCAGTCTTGGTTCTGCATGGGAGACCAGGTaGTCTCAAGATGCAAATGGCTACTTCTGGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: VCSSLGSAWETR*SQDANGYFWVL Trigger: AAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| 3UTR GCA 72 bp | TCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATaGAAATGGCTACTTCTGGGTTCTTTCCATCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SWFCMGDQVVSR*KWLLLGSFHPL Trigger: CAAAGGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR CCA 72 bp | TTCTGCATGGGAGACCAGGTGGTCTCAAGATGCAAATaGCTACTTCTGGGTTCTTTCCATCCTTTGAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FCMGDQVVSRCK*LLLGSFHPLRQ Trigger: TTGTCTCAAAGGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR CCA 72 bp | TCTTTCAACAGTTTAAGAGAACACCTTCTACCCCACTaGGTGAGTTTACTTGATACAGAGGGCAGAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFNSLREHLLPH*VSLLDTEGRAK Trigger: CTTGGCTCTGCCCTCTGTATCAAGTAAACTCACCCAGTGGGGTAGAAGGTGTTCTCTTAAACTGTTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR TCA 72 bp | ATAAGTTTAATGATCGGACAGAACACTGGTCAACTGTaGAAAATACCTAAGCCACAACTTCCCAAAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISLMIGQNTGQL*KIPKPQLPKRA Trigger: TGCTCTTTTGGGAAGTTGTGGCTTAGGTATTTTTCACAGTTGACCAGTGTTCTGTCCGATCATTAAACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CCAGACACGCTGGCCTCCATCCCCACAGGAGCAGGTTGCTTCTGTCTGCTGGGGGGCCGGGCAGTGCCTTaGCGGGCCACCTCGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PDTLASIPTGAGCFCLLGGRAVP*RATSAQ Trigger: CTGTGCCGAGGTGGCCCGGCAAGGCACTGCCCGGCC...CCCCAGCAGACAGAAGCAACCTGCTCCTGTGGGGATGGAGGCCAGCGTGTCTGG 69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGGATCCATGGGCGTGAACAAGGGTGGGGAGGCATGGAGGGTAAGGTGGGACCGGACCTGGGGGCTTaGGGGGCTGCTGTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGIHGREQGWGGMEGKVGPDLGA*GAAVRA Trigger: TGCCCGCACAGCAGCCCCGCAAGCCCCCAGGTCCGG...TCCCACCTTACCCTCCATGCCTCCCCACCCTTGTTCACGCCCATGGATCCCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGACTCGCCTCCTTGGATaGGCTCACGCAGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRTRLLG*AHAGQH Trigger: ATGCTGCCCTGCGTGAGCTCATCCAAGGAGGCGAGT...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | ACGCAGGGGCCGGGTGTGGGGCATGGGAAGGTAGGGCGTCTGGGTTCCCACAGGAGATCAGGCTCACCCTaGTGCTGGCTGCACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQGPGVGHGKVGRLGSHRRSGSP*CWLHTG Trigger: GCCTGTGTGCAGCCAGCAGCAGGGTGAGCCTGATCT...CCTGTGGGAACCCAGACGCCCTACCTTCCCATGCCCCACACCCGGCCCCTGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGATCCCAGCTGGGGACTCACTGCGTCCTCTGGGGAGGTAAGGGTAGGCACAGCCGGGCTCTCTaGCTGGGAGCTGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVGSQLGTHCVLWGGKGRHSRAL*LGAATV Trigger: AACAGTGGCAGCTCCCAGGCAGAGAGCCCGGCTGTG...CCTACCCTTACCTCCCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGACAGGGCATAGGGACTCGCCTGTACACGCAACCTGGGGGCAGCCGAGGCCAGATGGCCGAAGCATaGCAGGTGCTCTTCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQGIGTRLYTQPGGSRGQMAEA*QVLFPE Trigger: CTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTG...GCCTCGGCTGCCCCCAGGTTGCGTGTACAGGCGAGTCCCTATGCCCTGTCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGATCCCAGCTGGGGACTCACTGCGTCCTCTGGGGAGGTAAGGGTAGGGGTGCATGCGGCTGGTaGACTCCTCGCGAAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VVGSQLGTHCVLWGGKGRGACGW*TPREGS Trigger: TGATCCTTCGCGAGGAGTTCACCAGCCGCATGCACC...CCTACCCTTACCTCCCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGAGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCGGTTACGCAGGCGGGTaGGCAGGGTTCGAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVEKLKSCAGILVELDTSGYAGG*AGFEAG Trigger: CCCGGCCTCGAACCCTGCGCACCCGCCTGCGTAACC...GCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGACAGGGCATAGGGACTCGCCTGTACACGCAACCTGGGGGCAGCCGAGGCGGGAGCTGCCACTGTTaGGGATGTCTGGTGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQGIGTRLYTQPGGSRGGSCHC*GCLVSS Trigger: AGAGGACACCAGACATCCCCAACAGTGGCAGCTCCC...GCCTCGGCTGCCCCCAGGTTGCGTGTACAGGCGAGTCCCTATGCCCTGTCTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTCCCCTAACCTCCACCCACAGGGAAGGCTTCTGATGCCCTTGGCTGCCGCCTCCTCCTCCTCCTaGTGCTGGAGCAGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSPNLHPQGRLLMPLAAASSSS*CWSSFC Trigger: GCAAAAGCTGCTCCAGCAGCAGGAGGAGGAGGAGGC...GGCAGCCAAGGGCATCAGAAGCCTTCCCTGTGGGTGGAGGTTAGGGGAACCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGACAGGGCATAGGGACTCGCCTGTACACGCAACCTGGGGGCAGCCGAGGCCAAAGCCCCCATCTTTaGCGTCCAGGAATCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRQGIGTRLYTQPGGSRGQSPHL*RPGIAG Trigger: ACCAGCGATTCCTGGACGGCAAAGATGGGGGCTTTG...GCCTCGGCTGCCCCCAGGTTGCGTGTACAGGCGAGTCCCTATGCCCTGTCTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGGCCGGGCTCTCTGCCTaGGAGCTGCCACTGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRAGLSA*ELPLLG Trigger: CCCCAACAGTGGCAGCTCCCAGGCAGAGAGCCCGGC...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGATCCCAGCTGGGGACTCACTGCGTCCTCTGGGGAGGTAAGGGTAGGCGATGGCATGCAACATaGCACTCACAGCCGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGSQLGTHCVLWGGKGRRWHAT*HSQPGS Trigger: AGAGCCCGGCTGTGAGTGCCATGTTGCATGCCATCG...CCTACCCTTACCTCCCCAGAGGACGCAGTGAGTCCCCAGCTGGGATCCCACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CCAGACACGCTGGCCTCCATCCCCACAGGAGCAGGTTGCTTCTGTCTGCTGGGGGCTGTCTCCTTCTCCTaGGGTCCAGATGGAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDTLASIPTGAGCFCLLGAVSFS*GPDGMG Trigger: TCCCATTCCATCTGGACCGCAGGAGAAGGAGACAGC...CCCCAGCAGACAGAAGCAACCTGCTCCTGTGGGGATGGAGGCCAGCGTGTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGTAGGGCGTCTGGGTTCCCACAGGCCATGGCTGAGTCACAGGCAGCCATCTCCAGGAATCGCTGGTaGATGCGGCTGGTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRASGFPQAMAESQAAISRNRW*MRLVNS Trigger: GGAGTTCACCAGCCGCATGCACCAGCGATTCCTGGA...GATGGCTGCCTGTGACTCAGCCATGGCCTGTGGGAACCCAGACGCCCTACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGGATCCATGGGCGTGAACAAGGGTGGGGAGGCATGGAGGGTAAGGTGGGAGTCCCCACCCAGCTCTaGACTAGACACATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGIHGREQGWGGMEGKVGVPTQL*TRHILR Trigger: CCTGAGGATGTGTCTAGTGCAGAGCTGGGTGGGGAC...TCCCACCTTACCCTCCATGCCTCCCCACCCTTGTTCACGCCCATGGATCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTAGTGTCCAAAAAGGAGCAGCAGAGGCTGGTGCCACCTGGGTTCCCCCCGTCCAGGAATCGCTaGTGCATGCGGCTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLVSKKEQQRLVPPGFPPSRNR*CMRLVN Trigger: GTTCACCAGCCGCATGCACCAGCGATTCCTGGACGG...GGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCTTTTTGGACACTAGCTGGGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCTAGTGTCCAAAAAGGAGCAGCAGAGGCTGGTGCCACCTGGGTTCCCCGTCTGGTGTCCTCTCTaGTGTCTCCTTCTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLVSKKEQQRLVPPGFPVWCPL*CLLLLR Trigger: CCGCAGGAGAAGGAGACAGCAGAGAGGACACCAGAC...GGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCTTTTTGGACACTAGCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCTAGTGTCCAAAAAGGAGCAGCAGAGGCTGGTGCCACCTGGGTTCCCCTCTCTGCCTGGGAGCTaGCACTGTTGGGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLVSKKEQQRLVPPGFPSLPGS*HCWGCL Trigger: CAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAGA...GGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCTTTTTGGACACTAGCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | TGTACCACAACACCTGCACCTTCTACAGTCCCCCGAGATGGGAGGAAGTCTGTCGGCTCACCCTGCTGCTaGCTGCACACAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTTTPAPSTVPRDGRKSVGSPCC*LHTGRW Trigger: CCACCTGCCTGTGTGCAGCCAGCAGCAGGGTGAGCC...GACAGACTTCCTCCCATCTCGGGGGACTGTAGAAGGTGCAGGTGTTGTGGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGAGGTGGAGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGTCCTCCTCCTGCTGCTaGAGCAGCTTTTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRERWRNSRAALAFWWSWSSSCC*SSFCCS Trigger: GCTGCAGCAAAAGCTGCTCCAGCAGCAGGAGGAGGA...CCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTCTCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGCCACAGCAGTTTGGATTCTCAGGCCCAGACACGCTGGCCTCCATCCCGCACGGAACCGCATCTaGTCGTCGCTAAAGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSATAVWILRPRHAGLHPARNRI*SSLKYS Trigger: CGAGTACTTTAGCGACGAGCAGATGCGGTTCCGTGC...GGGATGGAGGCCAGCGTGTCTGGGCCTGAGAATCCAAACTGCTGTGGCACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGTGCTGGAGCAGCTTTTaGTGCAGCTCCCGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRCWSSF*CSSRSW Trigger: CCAGGAACGGGAGCTGCAGCAAAAGCTGCTCCAGCA...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGCTCCTGCGGTCCAGATaGAATGGGAGTCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRLLRSR*NGSLAQ Trigger: CTGAGCCAGACTCCCATTCCATCTGGACCGCAGGAG...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTAGTGTCCAAAAAGGAGCAGCAGAGGCTGGTGCCACCTGGGTTCCCCACTGTTGGGGATGTCTaGTGTCCTCTCTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLVSKKEQQRLVPPGFPTVGDV*CPLCCL Trigger: GAGACAGCAGAGAGGACACCAGACATCCCCAACAGT...GGGGAACCCAGGTGGCACCAGCCTCTGCTGCTCCTTTTTGGACACTAGCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTGGGGGCTTGCGGGGCTaGTGTGCGGGCATTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVLGSFRYGQSRMQPFAIGGLRG*CAGIEL Trigger: GAGCTCAATGCCCGCACAGCAGCCCCGCAAGCCCCC...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | TGTACCACAACACCTGCACCTTCTACAGTCCCCCGAGATGGGAGGAAGTCTGTCTCCTCCTCCTCCTGCTaGTGGAGCAGCTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTTTPAPSTVPRDGRKSVSSSSC*WSSFCC Trigger: GCAGCAAAAGCTGCTCCAGCAGCAGGAGGAGGAGGA...GACAGACTTCCTCCCATCTCGGGGGACTGTAGAAGGTGCAGGTGTTGTGGTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR CAA 72 bp | AGAATGCAGCCATTTGCCATTCAGTGCCACAGCAGTTaGGATTCTCAGGCCCAGACACGCTGGCCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RMQPFAIQCHSS*DSQAQTRWPPS Trigger: GGATGGAGGCCAGCGTGTCTGGGCCTGAGAATCCAAACTGCTGTGGCACTGAATGGCAAATGGCTGCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATGCAAATGGCTAGCGGTCCAGATGGAATaGGAGTCTGGCTCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQSWFCMGDQVVSRCKWLAVQME*ESGSAP Trigger: GGGAGCTGAGCCAGACTCCCATTCCATCTGGACCGC...TAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTCTGCACACAGGCAGGTaGCTGGCAGCGATGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLGSFRYGQSRMQPFAILHTGR*LAAMAC Trigger: GCATGCCATCGCTGCCAGCCACCTGCCTGTGTGCAG...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTCCCCTAACCTCCACCCACAGGGAAGGCTTCTGATGCCCTTGGCTGCCTATTGTCCTATGTACTaGTCATACAATAGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSPNLHPQGRLLMPLAAYCPMY*SYNSGA Trigger: TGCCCCACTATTGTATGAGCAGTACATAGGACAATA...GGCAGCCAAGGGCATCAGAAGCCTTCCCTGTGGGTGGAGGTTAGGGGAACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTCTTGGTTCTGCATGGGAGACCAGGTGGTCTCAAGATGCAAATGGCTAGGTGGCTGGCAGCGATaGCATGCAACATGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQSWFCMGDQVVSRCKWLGGWQR*HATWHS Trigger: TGAGTGCCATGTTGCATGCCATCGCTGCCAGCCACC...TAGCCATTTGCATCTTGAGACCACCTGGTCTCCCATGCAGAACCAAGACTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | AGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCATCCATGTCTTTATCCGACCTCTaGTCTTCCTCATCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNSRAALAFWWSWTLASMSLSDL*SSSSLS Trigger: GGACAGTGATGAGGAAGACCAGAGGTCGGATAAAGA...CATGGATGCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR CAA 72 bp | GCAGCCGAGGCAGGAGGACTGAGTTTCAGGCCAGCCTaGGCTACAAAGCAAGTAACACAGGCAAGTTATATA | + |
|
Preference number: 4 (lower is better) Translates to: AAEAGGLSFRPA*ATKQVTQASYI Trigger: TATATAACTTGCCTGTGTTACTTGCTTTGTAGCCAAGGCTGGCCTGAAACTCAGTCCTCCTGCCTCGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| 3UTR CAA 72 bp | AGATGCAAATGGCTACTTCTGGGTTCTTTCCATCCTTaGAGACAAGTGGCGACCAACAGTCTTGTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCKWLLLGSFHP*RQVATNSLVSR Trigger: CCTGGAAACAAGACTGTTGGTCGCCACTTGTCTCAAAGGATGGAAAGAACCCAGAAGTAGCCATTTGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTAACACAGGCAAGTTATATAATAAGATCCTGTCTCAAAGAGAAAAGACAGCCCAGTGCACAACTCTaGGCTCCACGCCGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTQASYIIRSCLKEKRQPSAQL*APRRHY Trigger: ATAATGACGGCGTGGAGCCCAGAGTTGTGCACTGGG...CTGTCTTTTCTCTTTGAGACAGGATCTTATTATATAACTTGCCTGTGTTACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS GCA 90 bp | AACGCCGGTTACGCAGGCGGGTGCGCAGGGTTCGAGGCCGGGCAGTaGCTTGCCGGGCCACCTCGGCACAGTAGAAATCAGCACGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NAGYAGGCAGFEAGQ*LAGPPRHSRNQHGG Trigger: ACCACCGTGCTGATTTCTACTGTGCCGAGGTGGCCCGGCAAGGCACTGCCCGGCCTCGAACCCTGCGCACCCGCCTGCGTAACCGGCGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
||
| CDS-3UTR CAA 90 bp | CCAACAGTCTTGTTTCCAGGTCTGTTAGGAGGTGTCAGTCAGGCCTGGCCCAGGAGGCCGGGCAGTGCCTaGCCGGGCCACCTCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTVLFPGLLGGVSQAWPRRPGSA*PGHLGT Trigger: TGTGCCGAGGTGGCCCGGCAAGGCACTGCCCGGCCT...CCTGGGCCAGGCCTGACTGACACCTCCTAACAGACCTGGAAACAAGACTGTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS TCA 90 bp | AGCCCCCATCTTTGCCGTCCAGGAATCGCTGGTGCATGCGGCTGGTaGACTCCTCGCGAAGGATCAGCCTCTCTTCCGAGTCAGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SPHLCRPGIAGACGW*TPREGSASLPSQAP Trigger: GGGTGCCTGACTCGGAAGAGAGGCTGATCCTTCGCGAGGAGTTCACCAGCCGCATGCACCAGCGATTCCTGGACGGCAAAGATGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
||
| CDS GCA 90 bp | AAATCAGCACGGTGGTCTCCACGCAGATGGCCGAAGCATGCCAGGTaGTCTTCCCGGAGGCCTGTGCGGAAGCGCTCCAAGAACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSARWSPRRWPKHAR*SSRRPVRKRSKNTS Trigger: GCTGGTGTTCTTGGAGCGCTTCCGCACAGGCCTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTGCGTGGAGACCACCGTGCTGATTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
||
| CDS TCA 90 bp | CGGAGGCCTGTGCGGAAGCGCTCCAAGAACACCAGCGGCTTCTTGTaGTACAGCTGGCCCAGGATGGCCACCTTCTCAGGCTCTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRPVRKRSKNTSGFL*YSWPRMATFSGSVR Trigger: TCTGACAGAGCCTGAGAAGGTGGCCATCCTGGGCCAGCTGTATCACAAGAAGCCGCTGGTGTTCTTGGAGCGCTTCCGCACAGGCCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
||
| CDS GCA 90 bp | CACGCAGATGGCCGAAGCATGCCAGGTGCTCTTCCCGGAGGCCTGTaGGGAAGCGCTCCAAGAACACCAGCGGCTTCTTGTGATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HADGRSMPGALPGGL*GSAPRTPAASCDTA Trigger: AGCTGTATCACAAGAAGCCGCTGGTGTTCTTGGAGCGCTTCCGCACAGGCCTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
||
| CDS CCA 90 bp | ATGGCCACCTTCTCAGGCTCTGTCAGATCAGGCTCACCCTGCTGCTaGCTGCACACAGGCAGGTGGCTGGCAGCGATGGCATGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: MATFSGSVRSGSPCC*LHTGRWLAAMACNM Trigger: CATGTTGCATGCCATCGCTGCCAGCCACCTGCCTGTGTGCAGCCAGCAGCAGGGTGAGCCTGATCTGACAGAGCCTGAGAAGGTGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 90 bp | CTCTGCCTGGGAGCTGCCACTGTTGGGGATGTCTGGTGTCCTCTCTaGTGTCTCCTTCTCCTGCGGTCCAGATGGAATGGGAGTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LCLGAATVGDVWCPL*CLLLLRSRWNGSLA Trigger: AGCCAGACTCCCATTCCATCTGGACCGCAGGAGAAGGAGACAGCAGAGAGGACACCAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 90 bp | TGGCATGCAACATGGCACTCACAGCCGGGCTCTCTGCCTGGGAGCTaGCACTGTTGGGGATGTCTGGTGTCCTCTCTGCTGTCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: WHATWHSQPGSLPGS*HCWGCLVSSLLSPS Trigger: AGAAGGAGACAGCAGAGAGGACACCAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAGAGCCCGGCTGTGAGTGCCATGTTGCATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 90 bp | ACAGTAGAAATCAGCACGGTGGTCTCCACGCAGATGGCCGAAGCATaGCAGGTGCTCTTCCCGGAGGCCTGTGCGGAAGCGCTCCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: TVEISTVVSTQMAEA*QVLFPEACAEALQE Trigger: TTCTTGGAGCGCTTCCGCACAGGCCTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTGCGTGGAGACCACCGTGCTGATTTCTACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS CCA 90 bp | GCTCCAAGAACACCAGCGGCTTCTTGTGATACAGCTGGCCCAGGATaGCCACCTTCTCAGGCTCTGTCAGATCAGGCTCACCCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: APRTPAASCDTAGPG*PPSQALSDQAHPAA Trigger: AGCAGCAGGGTGAGCCTGATCTGACAGAGCCTGAGAAGGTGGCCATCCTGGGCCAGCTGTATCACAAGAAGCCGCTGGTGTTCTTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS-3UTR CAA 90 bp | GAGGTGGAGAAACTCAAGAGCTGCGCTGGCATTCTGGTGGAGCTGGACACTAGCCTGCTGGAGCAGCTTTaGCTGCAGCTCCCGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EVEKLKSCAGILVELDTSLLEQL*LQLPFL Trigger: CAGGAACGGGAGCTGCAGCAAAAGCTGCTCCAGCAG...GCTAGTGTCCAGCTCCACCAGAATGCCAGCGCAGCTCTTGAGTTTCTCCACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS-3UTR CAA 90 bp | CCAGACACGCTGGCCTCCATCCCCACAGGAGCAGGTTGCTTCTGTCTGCTGGGGGCCACAATGTCCAGGTaGTCAAAGTCAGGGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PDTLASIPTGAGCFCLLGATMSR*SKSGLS Trigger: TGACAACCCTGACTTTGACAACCTGGACATTGTGGC...CCCCAGCAGACAGAAGCAACCTGCTCCTGTGGGGATGGAGGCCAGCGTGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS CCA 90 bp | TCTTCCGAGTCAGGCACCCAGGCTTCCGAGTCTTTATCCGACCTCTaGTCTTCCTCATCACTGTCCTCTTCCTCCTCAAAGCAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSESGTQASESLSDL*SSSSLSSSSSKQAS Trigger: GGAGGCCTGCTTTGAGGAGGAAGAGGACAGTGATGAGGAAGACCAGAGGTCGGATAAAGACTCGGAAGCCTGGGTGCCTGACTCGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS-3UTR CAA 90 bp | GGGAGACCAGGTGGTCTCAAGATGCAAATGGCTACTTCTGGGTTCTTTCCATCCGCTGCTGTGCGGGCATaGAGCTCTTCCTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GRPGGLKMQMATSGFFPSAAVRA*SSSWVR Trigger: CCTCACCCAGGAAGAGCTCAATGCCCGCACAGCAGC...GGATGGAAAGAACCCAGAAGTAGCCATTTGCATCTTGAGACCACCTGGTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 90 bp | GGGCCACAATGTCCAGGTTGTCAAAGTCAGGGTTGTCATCCACCGTaGTGTAGTCAAAGCCCCCATCTTTGCCGTCCAGGAATCGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GPQCPGCQSQGCHPP*CSQSPHLCRPGIAG Trigger: ACCAGCGATTCCTGGACGGCAAAGATGGGGGCTTTGACTACAGCACGGTGGATGACAACCCTGACTTTGACAACCTGGACATTGTGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 90 bp | TGTCCTATGTACTGCTCATACAATAGTGGGGCACGGAACCGCATCTaGTCGTCGCTAAAGTACTCGCCTCCTTGGATGAGCTCACGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CPMYCSYNSGARNRI*SSLKYSPPWMSSRR Trigger: CCTGCGTGAGCTCATCCAAGGAGGCGAGTACTTTAGCGACGAGCAGATGCGGTTCCGTGCCCCACTATTGTATGAGCAGTACATAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 90 bp | GTGCGGGCATTGAGCTCTTCCTGGGTGAGGTATTGTCCTATGTACTaGTCATACAATAGTGGGGCACGGAACCGCATCTGCTCGTCGCTA | + |
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Preference number: 5 (lower is better) Translates to: VRALSSSWVRYCPMY*SYNSGARNRICSSL Trigger: TAGCGACGAGCAGATGCGGTTCCGTGCCCCACTATTGTATGAGCAGTACATAGGACAATACCTCACCCAGGAAGAGCTCAATGCCCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS-3UTR CAA 90 bp | GCAGTTTTAGGTTCCTTCAGGTATGGCCAGAGCAGAATGCAGCCATTTGCCATTTTCCTGGGTGAGGTATaGTCCTATGTACTGCTCATA | + |
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Preference number: 5 (lower is better) Translates to: AVLGSFRYGQSRMQPFAIFLGEV*SYVLLI Trigger: TATGAGCAGTACATAGGACAATACCTCACCCAGGAA...AATGGCAAATGGCTGCATTCTGCTCTGGCCATACCTGAAGGAACCTAAAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | CACGCAGGGCAGCATAACGCCGGTTACGCAGGCGGGTaGGCAGGGTTCGAGGCCGGGCAGTGCCTTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: HAGQHNAGYAGG*AGFEAGQCLAG Trigger: CCCGGCAAGGCACTGCCCGGCCTCGAACCCTGCGCACCCGCCTGCGTAACCGGCGTTATGCTGCCCTGCGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | TACGCAGGCGGGTGCGCAGGGTTCGAGGCCGGGCAGTaGCTTGCCGGGCCACCTCGGCACAGTAGAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: YAGGCAGFEAGQ*LAGPPRHSRNQ Trigger: CTGATTTCTACTGTGCCGAGGTGGCCCGGCAAGGCACTGCCCGGCCTCGAACCCTGCGCACCCGCCTGCGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | CGGTGGTCTCCACGCAGATGGCCGAAGCATGCCAGGTaGTCTTCCCGGAGGCCTGTGCGGAAGCGCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RWSPRRWPKHAR*SSRRPVRKRSK Trigger: CTTGGAGCGCTTCCGCACAGGCCTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTGCGTGGAGACCACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | ACTGAAACAGCAGGTCGGAGAGTGGATAGGCAGGCGTaGCAGGAGAGCCGGACCTGGGGGCTTGCGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TETAGRRVDRQA*QESRTWGLAGL Trigger: CAGCCCCGCAAGCCCCCAGGTCCGGCTCTCCTGGCACGCCTGCCTATCCACTCTCCGACCTGCTGTTTCAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | TGGCTGCACACAGGCAGGTGGCTGGCAGCGATGGCATaGAACATGGCACTCACAGCCGGGCTCTCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLHTGRWLAAMA*NMALTAGLSAW Trigger: CCAGGCAGAGAGCCCGGCTGTGAGTGCCATGTTGCATGCCATCGCTGCCAGCCACCTGCCTGTGTGCAGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | ATCAGCACGGTGGTCTCCACGCAGATGGCCGAAGCATaGCAGGTGCTCTTCCCGGAGGCCTGTGCGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: ISTVVSTQMAEA*QVLFPEACAEA Trigger: CGCTTCCGCACAGGCCTCCGGGAAGAGCACCTGGCATGCTTCGGCCATCTGCGTGGAGACCACCGTGCTGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS CCA 72 bp | ACACAGGCAGGTGGCTGGCAGCGATGGCATGCAACATaGCACTCACAGCCGGGCTCTCTGCCTGGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TQAGGWQRWHAT*HSQPGSLPGSC Trigger: GCAGCTCCCAGGCAGAGAGCCCGGCTGTGAGTGCCATGTTGCATGCCATCGCTGCCAGCCACCTGCCTGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS CCA 72 bp | CCGTTCCTGGTAGGACTGAAACAGCAGGTCGGAGAGTaGATAGGCAGGCGTGCCAGGAGAGCCGGACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PFLVGLKQQVGE*IGRRARRAGPG Trigger: CCCAGGTCCGGCTCTCCTGGCACGCCTGCCTATCCACTCTCCGACCTGCTGTTTCAGTCCTACCAGGAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | ACATGGCACTCACAGCCGGGCTCTCTGCCTGGGAGCTaGCACTGTTGGGGATGTCTGGTGTCCTCTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TWHSQPGSLPGS*HCWGCLVSSLL Trigger: CAGCAGAGAGGACACCAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAGAGCCCGGCTGTGAGTGCCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS CCA 72 bp | GCATGCAACATGGCACTCACAGCCGGGCTCTCTGCCTaGGAGCTGCCACTGTTGGGGATGTCTGGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ACNMALTAGLSA*ELPLLGMSGVL Trigger: GAGGACACCAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAGAGCCCGGCTGTGAGTGCCATGTTGCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS CAA 72 bp | CCGGACCTGGGGGCTTGCGGGGCTGCTGTGCGGGCATaGAGCTCTTCCTGGGTGAGGTATTGTCCTATGTAC | + |
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Preference number: 6 (lower is better) Translates to: PDLGACGAAVRA*SSSWVRYCPMY Trigger: GTACATAGGACAATACCTCACCCAGGAAGAGCTCAATGCCCGCACAGCAGCCCCGCAAGCCCCCAGGTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS CAA 90 bp | CCAGGAGAGCCGGACCTGGGGGCTTGCGGGGCTGCTGTGCGGGCATaGAGCTCTTCCTGGGTGAGGTATTGTCCTATGTACTGCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: PGEPDLGACGAAVRA*SSSWVRYCPMYCSY Trigger: GTATGAGCAGTACATAGGACAATACCTCACCCAGGAAGAGCTCAATGCCCGCACAGCAGCCCCGCAAGCCCCCAGGTCCGGCTCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS TCA 72 bp | GTGCGGAAGCGCTCCAAGAACACCAGCGGCTTCTTGTaGTACAGCTGGCCCAGGATGGCCACCTTCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VRKRSKNTSGFL*YSWPRMATFSG Trigger: GCCTGAGAAGGTGGCCATCCTGGGCCAGCTGTATCACAAGAAGCCGCTGGTGTTCTTGGAGCGCTTCCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | GATGGCATGCAACATGGCACTCACAGCCGGGCTCTCTaGCTGGGAGCTGCCACTGTTGGGGATGTCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: DGMQHGTHSRAL*LGAATVGDVWC Trigger: ACACCAGACATCCCCAACAGTGGCAGCTCCCAGGCAGAGAGCCCGGCTGTGAGTGCCATGTTGCATGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | TCCTCTTCCTCCTCAAAGCAGGCCTCCTCCTCCTCCTaGTGCTGGAGCAGCTTTTGCTGCAGCTCCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSKQASSSS*CWSSFCCSSRS Trigger: GGAACGGGAGCTGCAGCAAAAGCTGCTCCAGCAGCAGGAGGAGGAGGAGGCCTGCTTTGAGGAGGAAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS TCA 72 bp | CTTTGCCGTCCAGGAATCGCTGGTGCATGCGGCTGGTaGACTCCTCGCGAAGGATCAGCCTCTCTTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: LCRPGIAGACGW*TPREGSASLPS Trigger: ACTCGGAAGAGAGGCTGATCCTTCGCGAGGAGTTCACCAGCCGCATGCACCAGCGATTCCTGGACGGCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | TCAAAGCCCCCATCTTTGCCGTCCAGGAATCGCTGGTaGATGCGGCTGGTGAACTCCTCGCGAAGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SKPPSLPSRNRW*MRLVNSSRRIS Trigger: GCTGATCCTTCGCGAGGAGTTCACCAGCCGCATGCACCAGCGATTCCTGGACGGCAAAGATGGGGGCTTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | TACTGCTCATACAATAGTGGGGCACGGAACCGCATCTaGTCGTCGCTAAAGTACTCGCCTCCTTGGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: YCSYNSGARNRI*SSLKYSPPWMS Trigger: GCTCATCCAAGGAGGCGAGTACTTTAGCGACGAGCAGATGCGGTTCCGTGCCCCACTATTGTATGAGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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| CDS GCA 72 bp | TGTCCAGGTTGTCAAAGTCAGGGTTGTCATCCACCGTaGTGTAGTCAAAGCCCCCATCTTTGCCGTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CPGCQSQGCHPP*CSQSPHLCRPG Trigger: TCCTGGACGGCAAAGATGGGGGCTTTGACTACAGCACGGTGGATGACAACCCTGACTTTGACAACCTGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002683.3 |
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| CDS GCA 72 bp | TTGAGCTCTTCCTGGGTGAGGTATTGTCCTATGTACTaGTCATACAATAGTGGGGCACGGAACCGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSSSWVRYCPMY*SYNSGARNRIC Trigger: GCAGATGCGGTTCCGTGCCCCACTATTGTATGAGCAGTACATAGGACAATACCTCACCCAGGAAGAGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002683.3 ENSMUST00000125699.3 |
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