Pregenerated sensors for CCDC96 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050677Ensembl transcript IDs: ENSMUST00000060100.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATATTTTTACAGGGAGACAGACTGGTCACTACACAACTCTGAGGTaGTTTCCTCTCATGGAATCTATGTCACTTACACTCTGGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: DIFTGRQTGHYTTLR*FPLMESMSLTLWNL Trigger: AAGGTTCCAGAGTGTAAGTGACATAGATTCCATGAGAGGAAAGCACCTCAGAGTTGTGTAGTGACCAGTCTGTCTCCCTGTAAAAATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR TCA 90 bp | CTTCATATGACCACACACACCTGCACACTGAGAGATGGGAATTTATaGGCTAATCAGGTCAGTGATTCAATACTCTTAAGTTTAATTAGT | + |
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Preference number: 1 (lower is better) Translates to: LHMTTHTCTLRDGNL*ANQVSDSILLSLIS Trigger: ACTAATTAAACTTAAGAGTATTGAATCACTGACCTGATTAGCTCATAAATTCCCATCTCTCAGTGTGCAGGTGTGTGTGGTCATATGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR TCA 90 bp | GTCAGTGATTCAATACTCTTAAGTTTAATTAGTACAAAGATGACTTaGGTCATCAGATCAGTGCATAGAGATTTTCTGTACCTTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: VSDSILLSLISTKMT*VIRSVHRDFLYLAH Trigger: GTGGGCAAGGTACAGAAAATCTCTATGCACTGATCTGATGACTCAAGTCATCTTTGTACTAATTAAACTTAAGAGTATTGAATCACTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGCCAAGTTCCACAGAATaGACAATCAGAGGCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GLACLKPGVGEQRQADPRPSSTE*TIRGRR Trigger: TCTTCTGCCTCTGATTGTCCATTCTGTGGAACTTGG...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGAACACTCCTTTAGACTaGGGCTACTTGGCTATAAAG | + |
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Preference number: 2 (lower is better) Translates to: WPCMPETWCWGTETSRSQNTPLD*GYLAIK Trigger: CTTTATAGCCAAGTAGCCCCAGTCTAAAGGAGTGTT...CTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGGTACGGCATGTCATCTaGAGGAAGCAGAGTTATGCA | + |
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Preference number: 2 (lower is better) Translates to: SEGDGRRQLFELSSLMHLVRHVI*RKQSYA Trigger: TGCATAACTCTGCTTCCTTCAGATGACATGCCGTAC...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGGGTTGCAGAAGTTTTTaGCAACTGTCCTGTCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SEGDGRRQLFELSSLMHLGCRSF*QLSCQG Trigger: CCCTTGACAGGACAGTTGGCAAAAACTTCTGCAACC...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGCTGAATTCAAACCCCTaGCATCCACATAAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SEGDGRRQLFELSSLMHLLNSNP*HPHKTA Trigger: GGCTGTTTTATGTGGATGCCAGGGGTTTGAATTCAG...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTTTCTGTACCTTGCCCACTCATTTAAGCCATCCTTAGACATAGGCAAGGAGAGTTTCTGGGGTTaGAGAAGTTTTTGCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: RDFLYLAHSFKPSLDIGKESFWG*RSFCQL Trigger: CAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTC...CTTGCCTATGTCTAAGGATGGCTTAAATGAGTGGGCAAGGTACAGAAAATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTTTCTGTACCTTGCCCACTCATTTAAGCCATCCTTAGACATAGGCAAGAGAGCTACTGCTAGCTaGAAGTGTTCAGCAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: RDFLYLAHSFKPSLDIGKRATAS*KCSAGI Trigger: AATTCCTGCTGAACACTTCCAGCTAGCAGTAGCTCT...CTTGCCTATGTCTAAGGATGGCTTAAATGAGTGGGCAAGGTACAGAAAATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR CAA 90 bp | ATTTGCAGTTTAAGGCATGCTAACCTTGGTGCCCTACATGATCCATaGCCCACCATGTTCAATGTTCAGGATGAAGCATTCAGTTACATA | + |
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Preference number: 2 (lower is better) Translates to: ICSLRHANLGALHDP*PTMFNVQDEAFSYI Trigger: TATGTAACTGAATGCTTCATCCTGAACATTGAACATGGTGGGCAATGGATCATGTAGGGCACCAAGGTTAGCATGCCTTAAACTGCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGAAGAGTGTTTTGTGATTaGCTACAATGCCTCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRRVFCD*LQCLQH Trigger: ATGCTGGAGGCATTGTAGTCAATCACAAAACACTCT...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR GCA 72 bp | TGGCATCCACATAAAACAGCCAGACGTGGCCTTGCATaGCTGAAACCTGGTGTTGGGGAACAGAGACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: WHPHKTARRGLA*LKPGVGEQRQA Trigger: TGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCACGTCTGGCTGTTTTATGTGGATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGAGAGAGTTTCTGGGGTaGCAGAAGTTTTTGCCAACT | + |
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Preference number: 3 (lower is better) Translates to: GLACLKPGVGEQRQADPRREFLG*QKFLPT Trigger: AGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCT...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR TCA 72 bp | ATCCACATAAAACAGCCAGACGTGGCCTTGCATGCCTaGAACCTGGTGTTGGGGAACAGAGACAAGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: IHIKQPDVALHA*NLVLGNRDKQI Trigger: GATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCACGTCTGGCTGTTTTATGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR CCA 72 bp | CATGAGCTGGGTTGGAAGGCATTGACTGATACTTTATaGACAAGTAGCTCATACCATTGGCAAACCCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: HELGWKALTDTL*TSSSYHWQTLS Trigger: GCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGTATCAGTCAATGCCTTCCAACCCAGCTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR TCA 72 bp | CAATATATTTCAGCAAACAAAGTACGGCATGTCATCTaGAGGAAGCAGAGTTATGCAGTGCCAACAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QYISANKVRHVI*RKQSYAVPTVR Trigger: TCTGACTGTTGGCACTGCATAACTCTGCTTCCTTCAGATGACATGCCGTACTTTGTTTGCTGAAATATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | TGGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGAAGGCGAGCCCGGCATaGTGGCGCTTCAGGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: WPCMPETWCWGTETSRSQKASPA*WRFRDS Trigger: GGAATCCCTGAAGCGCCATCATGCCGGGCTCGCCTT...CTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGAGATGGCCGGAACCGTaGCTCCTTCCTCTTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GLACLKPGVGEQRQADPRRWPEP*LLPLLP Trigger: AGGGAGAAGAGGAAGGAGTCACGGTTCCGGCCATCT...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | CCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGATTCTCCCTCTTCCCCTTaGCCTTCGGCTTCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PCMPETWCWGTETSRSQDSPSSP*PSASLA Trigger: GGCCAGAGAAGCCGAAGGGCAAGGGGAAGAGGGAGA...ATCCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGCTGGTCTGCTTCTCTTaGCACTGCTGCTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLACLKPGVGEQRQADPRLVCFS*HCCFSS Trigger: GGAGCTGAAGCAGCAGTGCCAAGAGAAGCAGACCAG...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGCTCTTTCGCAGCTTGTaGGCCTGGGGCAGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SEGDGRRQLFELSSLMHLLFRSL*AWGSPL Trigger: GAGGGGGCTGCCCCAGGCCCACAAGCTGCGAAAGAG...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGAGAAGCCCACATTTCTaGCTCAGCTTGACGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GLACLKPGVGEQRQADPRRSPHF*LSLTLS Trigger: CGACAACGTCAAGCTGAGTCAGAAATGTGGGCTTCT...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGATCTCTCAGGGCAGCCTaGCGCCCACCACGCGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRSLRAA*RPPRVR Trigger: CCGCACGCGTGGTGGGCGCCAGGCTGCCCTGAGAGA...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGTGCGGCAACTGCCCATaGCCTGCATCACCACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SEGDGRRQLFELSSLMHLCGNCP*PASPPA Trigger: AGCAGGTGGTGATGCAGGTCATGGGCAGTTGCCGCA...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGTTGATCTCGAGCGACTaGCTGGCCAGGCCTTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SEGDGRRQLFELSSLMHLLISSD*LARPSS Trigger: CGAGGAAGGCCTGGCCAGGCAGTCGCTCGAGATCAA...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGTTTCTCCTCTTCCTTaGCCTCTCCAGGGTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: WPCMPETWCWGTETSRSQVSPLP*PLQGEV Trigger: AACTTCACCCTGGAGAGGCCAAGGAAGAGGAGAAAC...CTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | AGAGATTTTCTGTACCTTGCCCACTCATTTAAGCCATCCTTAGACATAGGCAAGTCACCACCTGCTTCTTaGGGGCCTGGAAGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RDFLYLAHSFKPSLDIGKSPPAS*GPGSAA Trigger: GGCGGCGCTTCCAGGCCCTCAAGAAGCAGGTGGTGA...CTTGCCTATGTCTAAGGATGGCTTAAATGAGTGGGCAAGGTACAGAAAATCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | TTCCACAGAATGGACAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGAGCTCGCCGCGCAGTTaGTGCTCTTGCAGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FHRMDNQRQKRVREFLGLSSPRS*CSCSFC Trigger: GCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCT...CAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTGTCCATTCTGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGATTTCGTCTTTGTCCTCTaGTTCCTTGGACTCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PCMPETWCWGTETSRSQDFVFVL*FLGLRL Trigger: AAGCCGGAGTCCAAGGAACCAGAGGACAAAGACGAA...ATCCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGACTGTGGCAGACTCTCTaGCTCTCGGGACACGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRLWQTL*LSGHGL Trigger: GAGGCCGTGTCCCGAGAGCCAGAGAGTCTGCCACAG...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAACTGTCTTATCCTCCAGGGCCTaGAGCTGTTCCACCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RQKRVREFLGLQKFLPTVLSSRA*SCSTSL Trigger: GAGAGAGGTGGAACAGCTTCAGGCCCTGGAGGATAA...GACAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAACTGTCCGCAGTTGCTGCTCTTaGAGCTTCTGCATGTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RQKRVREFLGLQKFLPTVRSCCS*SFCMSA Trigger: AGCGGACATGCAGAAGCTGCAAGAGCAGCAACTGCG...GACAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGAGCCCTTCGGCTTCTCTaGCCTGTCCCGTTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGYKGFSLEVSLITALSRALRLL*PVPFLS Trigger: GGAGAGGAACGGGACAGGCCAGAGAAGCCGAAGGGC...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGATCGCCGCGCAGTTGCTaGTCTTGCAGCTTCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRSPRSC*SCSFCM Trigger: CATGCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGA...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAACTGTCCTTCCAGCCCCTTCTTaGGTAGGGTCTCGTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: RQKRVREFLGLQKFLPTVLPAPS*VGSRES Trigger: AGATTCACGAGACCCTACGCAAGAAGGGGCTGGAAG...GACAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGAAGGCTCTGCTTCAGCTaGACGTTCTCGAGACGCACG | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRRLCFS*TFSRRT Trigger: CGTGCGTCTCGAGAACGTGCAGCTGAAGCAGAGCCT...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGGCTTCCCTGATCTTTTaGTTCACCCCTTTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SEGDGRRQLFELSSLMHLASLIF*FTPLQD Trigger: GTCCTGCAAAGGGGTGAAGCAAAAGATCAGGGAAGC...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGATGCTTCTTGAGGGCCTaGAAGCGCCGCCACTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRCFLRA*KRRHSF Trigger: GAAAGAGTGGCGGCGCTTCCAGGCCCTCAAGAAGCA...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| 3UTR CAA 72 bp | TCGGCTCTTGGAGGCACAAAGACAACTGCTTTGGCCTaGAAGGATAGGGTAGAGGGACAAAACAAAACTAGC | + |
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Preference number: 4 (lower is better) Translates to: SALGGTKTTALA*KDRVEGQNKTS Trigger: GCTAGTTTTGTTTTGTCCCTCTACCCTATCCTTCAAGGCCAAAGCAGTTGTCTTTGTGCCTCCAAGAGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGAGCTGTTCAAAGTCGATaGGGAGCAGCCCCTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGYKGFSLEVSLITALSRAVQSR*GAAPQP Trigger: TGGCTGAGGGGCTGCTCCTCATCGACTTTGAACAGC...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | AGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAACTGTCATTCCAGGCGCCTGTTaGGCATTTCTGTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RQKRVREFLGLQKFLPTVIPGAC*AFLSSP Trigger: TGGAGAAGACAGAAATGCTCAACAGGCGCCTGGAAT...GACAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGTGAGGGGGATGGACGACGTCAGCTTTTTGAACTGTCCTCACTAATGCATTTGCAGATAGCGCAAGTATaGTTGCTCTTTCTCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SEGDGRRQLFELSSLMHLQIAQV*LLFLGR Trigger: TCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTG...CAAATGCATTAGTGAGGACAGTTCAAAAAGCTGACGTCGTCCATCCCCCTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR GCA 90 bp | AGAGATTTTCTGTACCTTGCCCACTCATTTAAGCCATCCTTAGACATAGGCAAGTTCTCCACCCTGGTCTaGTTCTCTTGGCACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RDFLYLAHSFKPSLDIGKFSTLV*FSWHCC Trigger: GCAGCAGTGCCAAGAGAAGCAGACCAGGGTGGAGAA...CTTGCCTATGTCTAAGGATGGCTTAAATGAGTGGGCAAGGTACAGAAAATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | TTCCACAGAATGGACAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGTCAGTTCCTCCAGCATaGCCAGATAGCGCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: FHRMDNQRQKRVREFLGLSVPPA*PDSASM Trigger: CATACTTGCGCTATCTGGCCATGCTGGAGGAACTGA...CAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTGTCCATTCTGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR TCA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGATTGGCCTCTCCAGGGTaGAGTTGCTCTTCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRLASPG*SCSSVL Trigger: AAGCACAGAAGAGCAACTTCACCCTGGAGAGGCCAA...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS-3UTR CCA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGACCTGGGCCTTCATCCTaGTTTCAAAGTGTACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGYKGFSLEVSLITALSRPGPSS*FQSVPG Trigger: GCCTGGTACACTTTGAAACCAGGATGAAGGCCCAGG...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| 3UTR CAA 72 bp | TTAAGGCATGCTAACCTTGGTGCCCTACATGATCCATaGCCCACCATGTTCAATGTTCAGGATGAAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRHANLGALHDP*PTMFNVQDEAF Trigger: GAATGCTTCATCCTGAACATTGAACATGGTGGGCAATGGATCATGTAGGGCACCAAGGTTAGCATGCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR GCA 90 bp | CAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAGCTTTTCCTTCACGTaGGTTATAATCTGCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSEAEESKRVSGVAEVFASFSFT*VIICTL Trigger: CAACGTGCAGATTATAACGCACGTGAAGGAAAAGCT...GGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGAAAAGTTGTGCCTTTTTaGATGAGTTCTCCGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGYKGFSLEVSLITALSRKVVPF*MSSPYL Trigger: TAGATACGGAGAACTCATGCAAAAAGGCACAACTTT...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | CTTGGACTCCGGCTTGGTCTTGGGCTGGGTCTGTGGCAGACTCTCTaGCTCTCGGGACACGGCCTCGCCCGCGGTCTCAGCGGCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLRLGLGLGLWQTL*LSGHGLARGLSGPR Trigger: CCGGGGGCCGCTGAGACCGCGGGCGAGGCCGTGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | CTCAGGCTCCCGCCCTTGCGTCGGCTCCGGCTCTGGCTTCGGCTCTaGCTCCTGCTCTACAGGGTTGGCCGGAGTCAGAGGTTCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRLPPLRRLRLWLRL*LLLYRVGRSQRFGA Trigger: AGCTCCGAACCTCTGACTCCGGCCAACCCTGTAGAGCAGGAGCCAGAGCCGAAGCCAGAGCCGGAGCCGACGCAAGGGCGGGAGCCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | GTCCTCTGGTTCCTTGGACTCCGGCTTGGTCTTGGGCTGGGTCTGTaGCAGACTCTCTGGCTCTCGGGACACGGCCTCGCCCGCGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLWFLGLRLGLGLGL*QTLWLSGHGLARGL Trigger: GAGACCGCGGGCGAGGCCGTGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | TCCCGCCCTTGCGTCGGCTCCGGCTCTGGCTTCGGCTCTGGCTCCTaGTCTACAGGGTTGGCCGGAGTCAGAGGTTCGGAGCTAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRPCVGSGSGFGSGS*STGLAGVRGSELTL Trigger: CAAGGTTAGCTCCGAACCTCTGACTCCGGCCAACCCTGTAGAGCAGGAGCCAGAGCCGAAGCCAGAGCCGGAGCCGACGCAAGGGCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | CGCCCACCACGCGTGCGGCAACTGCCCATGACCTGCATCACCACCTaGTTCTTGAGGGCCTGGAAGCGCCGCCACTCTTTCTCCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPRVRQLPMTCITT*FLRAWKRRHSFSTL Trigger: CAGGGTGGAGAAAGAGTGGCGGCGCTTCCAGGCCCTCAAGAAGCAGGTGGTGATGCAGGTCATGGGCAGTTGCCGCACGCGTGGTGGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | TTGGCCGGAGTCAGAGGTTCGGAGCTAACCTTGATCTCGAGCGACTaGCTGGCCAGGCCTTCCTCGGCTCGGTCTTTGCCCTCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAGVRGSELTLISSD*LARPSSARSLPSMS Trigger: GGACATCGAGGGCAAAGACCGAGCCGAGGAAGGCCTGGCCAGGCAGTCGCTCGAGATCAAGGTTAGCTCCGAACCTCTGACTCCGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | CTTTCGCAGCTTGTGGGCCTGGGGCAGCCCCCTCCTCAACAATTGTaGTCAGCGGTAGAGATGGCCGGAACCGTGACTCCTTCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQLVGLGQPPPQQL*SAVEMAGTVTPSSS Trigger: AGAAGAGGAAGGAGTCACGGTTCCGGCCATCTCTACCGCTGACCACAATTGTTGAGGAGGGGGCTGCCCCAGGCCCACAAGCTGCGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | CATCCTCGTCTTCGTCTTTGTCCTCTGGTTCCTTGGACTCCGGCTTaGTCTTGGGCTGGGTCTGTGGCAGACTCTCTGGCTCTCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HPRLRLCPLVPWTPA*SWAGSVADSLALGT Trigger: TGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAAAGACGAAGACGAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGTTCTCCCTCTTCCCCTaGCCCTTCGGCTTCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPCMPETWCWGTETSRSQFSLFP*PFGFSG Trigger: GCCAGAGAAGCCGAAGGGCAAGGGGAAGAGGGAGAA...CTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGATCAGCTCGCCGCGCAGTaGCTGCTCTTGCAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCMPETWCWGTETSRSQDQLAAQ*LLLQLL Trigger: CAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCTG...ATCCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGCCTGGTCTGCTTCTCTaGGCACTGCTGCTTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLACLKPGVGEQRQADPRPGLLL*ALLLQL Trigger: GAGCTGAAGCAGCAGTGCCAAGAGAAGCAGACCAGG...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGATATCACCACCTGCTTCTaGAGGGCCTGGAAGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PCMPETWCWGTETSRSQDITTCF*RAWKRR Trigger: GCGGCGCTTCCAGGCCCTCAAGAAGCAGGTGGTGAT...ATCCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS TCA 90 bp | CTGATCTTTTGCTTCACCCCTTTGCAGGACAAGGCGAGCCCGGCATaGTGGCGCTTCAGGGATTCCAGGCGCCTGTTGAGCATTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFCFTPLQDKASPA*WRFRDSRRLLSISV Trigger: GACAGAAATGCTCAACAGGCGCCTGGAATCCCTGAAGCGCCATCATGCCGGGCTCGCCTTGTCCTGCAAAGGGGTGAAGCAAAAGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | ACTAGCAGGGAGTGGTACTGTTCCACCAGCTCGCCGCGCAGTTGCTaGTCTTGCAGCTTCTGCATGTCCGCTGTCCACTCAAACTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSREWYCSTSSPRSC*SCSFCMSAVHSNSS Trigger: TGAAGAGTTTGAGTGGACAGCGGACATGCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCTGGTGGAACAGTACCACTCCCTGCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | AAGTCCTCCTGGGCCTTCATCCTGGTTTCAAAGTGTACCAGGCTCTaGTTCAGCTGCACGTTCTCGAGACGCACGGCGCTCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSSWAFILVSKCTRL*FSCTFSRRTALISF Trigger: GAAGGAGATGAGCGCCGTGCGTCTCGAGAACGTGCAGCTGAAGCAGAGCCTGGTACACTTTGAAACCAGGATGAAGGCCCAGGAGGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGGATTCCAGGCGCCTGTaGAGCATTTCTGTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLACLKPGVGEQRQADPRDSRRL*SISVFS Trigger: GGAGAAGACAGAAATGCTCAACAGGCGCCTGGAATC...CCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS TCA 90 bp | TTCTCGATCTGTCCCCTCGATCTCTTCACTGTCTCTCTTCTTCAGTaGCTCCCTTGCTTTCTCTTTCGCAGCTTGTGGGCCTGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSICPLDLFTVSLLQ*LPCFLFRSLWAWGS Trigger: GCTGCCCCAGGCCCACAAGCTGCGAAAGAGAAAGCAAGGGAGTCACTGAAGAAGAGAGACAGTGAAGAGATCGAGGGGACAGATCGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | TGGGCCTTCATCCTGGTTTCAAAGTGTACCAGGCTCTGCTTCAGCTaGACGTTCTCGAGACGCACGGCGCTCATCTCCTTCTCCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WAFILVSKCTRLCFS*TFSRRTALISFSFL Trigger: TAAGAAGGAGAAGGAGATGAGCGCCGTGCGTCTCGAGAACGTGCAGCTGAAGCAGAGCCTGGTACACTTTGAAACCAGGATGAAGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | CTCTTGTTTCTTCAGTTCCTCCAGCATGGCCAGATAGCGCAAGTATaGTTGCTCTTTCTCGGGAGATTCGGGTTCAGCGCTCTTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFLQFLQHGQIAQV*LLFLGRFGFSALVP Trigger: GGGGACAAGAGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTGAAGAAACAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | CGGGCTTGTTTTGTCTTCGTCAACAGGTCTCTTCCTAGGGCCACCTaGGCATCCACTTCCGAAAGTTGTGCCTTTTTGCATGAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RACFVFVNRSLPRAT*ASTSESCAFLHEFS Trigger: GGAGAACTCATGCAAAAAGGCACAACTTTCGGAAGTGGATGCCCAGGTGGCCCTAGGAAGAGACCTGTTGACGAAGACAAAACAAGCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | GTTTCTCCTCTTCCTTGGCCTCTCCAGGGTGAAGTTGCTCTTCTGTaGTTTTGTGTCGTTCTCGATCTGTCCCCTCGATCTCTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSPLPWPLQGEVALL*FCVVLDLSPRSLHC Trigger: ACAGTGAAGAGATCGAGGGGACAGATCGAGAACGACACAAAAGCACAGAAGAGCAACTTCACCCTGGAGAGGCCAAGGAAGAGGAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | ACCACTCTAAGTCGTCTGCCTCTTGTTTCTTCAGTTCCTCCAGCATaGCCAGATAGCGCAAGTATGCTTGCTCTTTCTCGGGAGATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTLSRLPLVSSVPPA*PDSASMLALSREIR Trigger: CCGAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTGAAGAAACAAGAGGCAGACGACTTAGAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCTTGTCCTCTGGTTCCTaGGACTCCGGCTTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSEAEESKRVSGVAEVFALSSGS*DSGLVL Trigger: CAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAA...GGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGATTTCTCTTTCGCAGCTaGTGGGCCTGGGGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGYKGFSLEVSLITALSRFLFRS*WAWGSP Trigger: GGGGCTGCCCCAGGCCCACAAGCTGCGAAAGAGAAA...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGTCCTCTACTTTCTCGTaGAAGGTCTGGTTCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: WPCMPETWCWGTETSRSQSSTFS*KVWFSI Trigger: AATTGAGAACCAGACCTTCAACGAGAAAGTAGAGGA...CTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAGTGGACGCCCCTTTTaGTTTCTCCTCTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSEAEESKRVSGVAEVFASGRPF*FLLFLG Trigger: GCCAAGGAAGAGGAGAAACAAAAAGGGGCGTCCACT...GGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCATGCCTGAAACCTGGTGTTGGGGAACAGAGACAAGCAGATCCCAGGATGTCTGGTTCTCAATTTaGAGCTGTTCAAAGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PCMPETWCWGTETSRSQDVWFSI*SCSKSM Trigger: CATCGACTTTGAACAGCTCAAAATTGAGAACCAGAC...ATCCTGGGATCTGCTTGTCTCTGTTCCCCAACACCAGGTTTCAGGCATGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGCAGAAGTTTTTGCCAACTGTCGGCTTCCCTGATCTTTaGCTTCACCCCTTTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQKRVREFLGLQKFLPTVGFPDL*LHPFAG Trigger: TCCTGCAAAGGGGTGAAGCAAAAGATCAGGGAAGCC...GACAGTTGGCAAAAACTTCTGCAACCCCAGAAACTCTCTTACTCTCTTCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS TCA 90 bp | GAGCATTTCTGTCTTCTCCACCTTTTCTTCCAAGTCTCGGAGGAGTaGTTCCTTACCCAGAAGCCCACATTTCTGACTCAGCTTGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: EHFCLLHLFFQVSEE*FLTQKPTFLTQLDV Trigger: AACGTCAAGCTGAGTCAGAAATGTGGGCTTCTGGGTAAGGAATCACTCCTCCGAGACTTGGAAGAAAAGGTGGAGAAGACAGAAATGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAATGGACAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGTCTTCAGTGACTCCCTaGCTTTCTCTTTCGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHRMDNQRQKRVREFLGLSSVTP*LSLSQL Trigger: AAGCTGCGAAAGAGAAAGCAAGGGAGTCACTGAAGA...CAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTGTCCATTCTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | ACTTTATGGACAAGTAGCTCATACCATTGGCAAACCCTAAGCTATAGCTGCAGACTCTCCAGGGTGAAGTaGCTCTTCTGTGCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWTSSSYHWQTLSYSCRLSRVK*LFCAFV Trigger: CACAAAAGCACAGAAGAGCAACTTCACCCTGGAGAG...TCTGCAGCTATAGCTTAGGGTTTGCCAATGGTATGAGCTACTTGTCCATAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 90 bp | TTGCATGAGTTCTCCGTATCTATGAAAGACAGCTTTTCCTTCACGTaGGTTATAATCTGCACGTTGCTGGTCACCTTAGTGCGCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHEFSVSMKDSFSFT*VIICTLLVTLVRSF Trigger: AAAACTGCGCACTAAGGTGACCAGCAACGTGCAGATTATAACGCACGTGAAGGAAAAGCTGTCTTTCATAGATACGGAGAACTCATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 90 bp | TTTAAAAGTTCCTCGTTTCGTTCCTCTACTTTCTCGTTGAAGGTCTaGTTCTCAATTTTGAGCTGTTCAAAGTCGATGAGGAGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FKSSSFRSSTFSLKV*FSILSCSKSMRSSP Trigger: GGGGCTGCTCCTCATCGACTTTGAACAGCTCAAAATTGAGAACCAGACCTTCAACGAGAAAGTAGAGGAACGAAACGAGGAACTTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | TTCCACAGAATGGACAATCAGAGGCAGAAGAGAGTAAGAGAGTTTCTGGGGTTGGAAAGTTGTGCCTTTTaGCATGAGTTCTCCGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: FHRMDNQRQKRVREFLGLESCAF*HEFSVS Trigger: AGATACGGAGAACTCATGCAAAAAGGCACAACTTTC...CAACCCCAGAAACTCTCTTACTCTCTTCTGCCTCTGATTGTCCATTCTGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTATAAAGGCTTTTCACTAGAAGTCAGTTTAATCACCGCACTCTCTAGAATAGCGCAAGTATGCTaGCTCTTTCTCGGGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LGYKGFSLEVSLITALSRIAQVC*LFLGRF Trigger: GAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTAT...TCTAGAGAGTGCGGTGATTAAACTGACTTCTAGTGAAAAGCCTTTATAGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 72 bp | CCGCCCTTGCGTCGGCTCCGGCTCTGGCTTCGGCTCTaGCTCCTGCTCTACAGGGTTGGCCGGAGTCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPLRRLRLWLRL*LLLYRVGRSQR Trigger: CCTCTGACTCCGGCCAACCCTGTAGAGCAGGAGCCAGAGCCGAAGCCAGAGCCGGAGCCGACGCAAGGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 72 bp | CGGCTTGGTCTTGGGCTGGGTCTGTGGCAGACTCTCTaGCTCTCGGGACACGGCCTCGCCCGCGGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLGLGLGLWQTL*LSGHGLARGLS Trigger: GCTGAGACCGCGGGCGAGGCCGTGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 72 bp | TTCCTTGGACTCCGGCTTGGTCTTGGGCTGGGTCTGTaGCAGACTCTCTGGCTCTCGGGACACGGCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLGLRLGLGLGL*QTLWLSGHGLA Trigger: GGCGAGGCCGTGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS TCA 72 bp | TGCTTCACCCCTTTGCAGGACAAGGCGAGCCCGGCATaGTGGCGCTTCAGGGATTCCAGGCGCCTGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFTPLQDKASPA*WRFRDSRRLLS Trigger: GCTCAACAGGCGCCTGGAATCCCTGAAGCGCCATCATGCCGGGCTCGCCTTGTCCTGCAAAGGGGTGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 72 bp | GTCAGAGGTTCGGAGCTAACCTTGATCTCGAGCGACTaGCTGGCCAGGCCTTCCTCGGCTCGGTCTTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRGSELTLISSD*LARPSSARSLP Trigger: GGGCAAAGACCGAGCCGAGGAAGGCCTGGCCAGGCAGTCGCTCGAGATCAAGGTTAGCTCCGAACCTCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CCA 72 bp | TCCTCTGGTTCCTTGGACTCCGGCTTGGTCTTGGGCTaGGTCTGTGGCAGACTCTCTGGCTCTCGGGACACG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSLDSGLVLG*VCGRLSGSRDT Trigger: CGTGTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS CAA 72 bp | GCTTGCTCTTTCTCGGGAGATTCGGGTTCAGCGCTCTaGTCCCCAGGTTCCGCCGCTGCTTCCAGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACSFSGDSGSAL*SPGSAAASSPF Trigger: GAAGGGGCTGGAAGCAGCGGCGGAACCTGGGGACAAGAGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
||
| CDS GCA 72 bp | AGGGAGTGGTACTGTTCCACCAGCTCGCCGCGCAGTTaGTGCTCTTGCAGCTTCTGCATGTCCGCTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: REWYCSTSSPRS*CSCSFCMSAVH Trigger: GTGGACAGCGGACATGCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCTGGTGGAACAGTACCACTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | CTTTGTCCTCTGGTTCCTTGGACTCCGGCTTGGTCTTaGGCTGGGTCTGTGGCAGACTCTCTGGCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LCPLVPWTPAWS*AGSVADSLALG Trigger: CCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 90 bp | TCTCTTTCGCAGCTTGTGGGCCTGGGGCAGCCCCCTCCTCAACAATaGTGGTCAGCGGTAGAGATGGCCGGAACCGTGACTCCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSQLVGLGQPPPQQ*WSAVEMAGTVTPSS Trigger: AGAGGAAGGAGTCACGGTTCCGGCCATCTCTACCGCTGACCACAATTGTTGAGGAGGGGGCTGCCCCAGGCCCACAAGCTGCGAAAGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 90 bp | CGCAAGTATGCTTGCTCTTTCTCGGGAGATTCGGGTTCAGCGCTCTaGTCCCCAGGTTCCGCCGCTGCTTCCAGCCCCTTCTTGCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RKYACSFSGDSGSAL*SPGSAAASSPFLRR Trigger: CCTACGCAAGAAGGGGCTGGAAGCAGCGGCGGAACCTGGGGACAAGAGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGCATACTTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS TCA 72 bp | ATGCGCGTAATCGATCCCCTCCGAATCCTTCGCTTTTaGGCTGTCCGACACCGGCTGGGTCTCGCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: MRVIDPLRILRF*AVRHRLGLALR Trigger: CCTGAGAGCGAGACCCAGCCGGTGTCGGACAGCTCAAAAGCGAAGGATTCGGAGGGGATCGATTACGCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | GAGTGGTACTGTTCCACCAGCTCGCCGCGCAGTTGCTaGTCTTGCAGCTTCTGCATGTCCGCTGTCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: EWYCSTSSPRSC*SCSFCMSAVHS Trigger: TGAGTGGACAGCGGACATGCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCTGGTGGAACAGTACCACTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 90 bp | TCATCCTCGTCTTCGTCTTTGTCCTCTGGTTCCTTGGACTCCGGCTaGGTCTTGGGCTGGGTCTGTGGCAGACTCTCTGGCTCTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSLSSGSLDSG*VLGWVCGRLSGSRD Trigger: GTCCCGAGAGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAAAGACGAAGACGAGGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | ACCAGCTCGCCGCGCAGTTGCTGCTCTTGCAGCTTCTaGATGTCCGCTGTCCACTCAAACTCTTCAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: TSSPRSCCSCSF*MSAVHSNSSVD Trigger: GTCCACTGAAGAGTTTGAGTGGACAGCGGACATGCAGAAGCTGCAAGAGCAGCAACTGCGCGGCGAGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | TGGGCCTTCATCCTGGTTTCAAAGTGTACCAGGCTCTaGTTCAGCTGCACGTTCTCGAGACGCACGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: WAFILVSKCTRL*FSCTFSRRTAL Trigger: GAGCGCCGTGCGTCTCGAGAACGTGCAGCTGAAGCAGAGCCTGGTACACTTTGAAACCAGGATGAAGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | CTTCGTCTTTGTCCTCTGGTTCCTTGGACTCCGGCTTaGTCTTGGGCTGGGTCTGTGGCAGACTCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRLCPLVPWTPA*SWAGSVADSLA Trigger: AGCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAAAGACGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | GCAGCCCCTCAGCCAAGTCCTCCTGGGCCTTCATCCTaGTTTCAAAGTGTACCAGGCTCTGCTTCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AAPQPSPPGPSS*FQSVPGSASAA Trigger: TGCAGCTGAAGCAGAGCCTGGTACACTTTGAAACCAGGATGAAGGCCCAGGAGGACTTGGCTGAGGGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 72 bp | TCTTCGTCTTTGTCCTCTGGTTCCTTGGACTCCGGCTaGGTCTTGGGCTGGGTCTGTGGCAGACTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSSLSSGSLDSG*VLGWVCGRLSG Trigger: GCCAGAGAGTCTGCCACAGACCCAGCCCAAGACCAAGCCGGAGTCCAAGGAACCAGAGGACAAAGACGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | ATCCTGGTTTCAAAGTGTACCAGGCTCTGCTTCAGCTaGACGTTCTCGAGACGCACGGCGCTCATCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILVSKCTRLCFS*TFSRRTALISF Trigger: GAAGGAGATGAGCGCCGTGCGTCTCGAGAACGTGCAGCTGAAGCAGAGCCTGGTACACTTTGAAACCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS TCA 72 bp | TTCTCTTGGCACTGCTGCTTCAGCTCCCGTACCTCCTaGCGGTACCACTCTAAGTCGTCTGCCTCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSWHCCFSSRTS*RYHSKSSASCF Trigger: GAAACAAGAGGCAGACGACTTAGAGTGGTACCGTCAGGAGGTACGGGAGCTGAAGCAGCAGTGCCAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | CTTCAGTTCCTCCAGCATGGCCAGATAGCGCAAGTATaGTTGCTCTTTCTCGGGAGATTCGGGTTCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LQFLQHGQIAQV*LLFLGRFGFSA Trigger: AGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 72 bp | CAGTTCCTCCAGCATGGCCAGATAGCGCAAGTATGCTaGCTCTTTCTCGGGAGATTCGGGTTCAGCGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QFLQHGQIAQVC*LFLGRFGFSAL Trigger: AAGAGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 90 bp | TTGTTTCTTCAGTTCCTCCAGCATGGCCAGATAGCGCAAGTATGCTaGCTCTTTCTCGGGAGATTCGGGTTCAGCGCTCTTGTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LFLQFLQHGQIAQVC*LFLGRFGFSALVPR Trigger: CCTGGGGACAAGAGCGCTGAACCCGAATCTCCCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTGAAGAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS TCA 72 bp | ATTCCTTACCCAGAAGCCCACATTTCTGACTCAGCTTaGCGTTGTCGATTCGCAGGCTGTCGCGGGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: IPYPEAHISDSA*RCRFAGCRGLV Trigger: AACAAGCCCGCGACAGCCTGCGAATCGACAACGTCAAGCTGAGTCAGAAATGTGGGCTTCTGGGTAAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | CTTCCTTGGCCTCTCCAGGGTGAAGTTGCTCTTCTGTaGTTTTGTGTCGTTCTCGATCTGTCCCCTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: LPWPLQGEVALL*FCVVLDLSPRS Trigger: AGATCGAGGGGACAGATCGAGAACGACACAAAAGCACAGAAGAGCAACTTCACCCTGGAGAGGCCAAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | GCTTCTGCATGTCCGCTGTCCACTCAAACTCTTCAGTaGACGCCCCTTTTTGTTTCTCCTCTTCCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ASACPLSTQTLQ*TPLFVSPLPWP Trigger: AGGCCAAGGAAGAGGAGAAACAAAAAGGGGCGTCCACTGAAGAGTTTGAGTGGACAGCGGACATGCAGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | AGTCGTCTGCCTCTTGTTTCTTCAGTTCCTCCAGCATaGCCAGATAGCGCAAGTATGCTTGCTCTTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SRLPLVSSVPPA*PDSASMLALSR Trigger: CCGAGAAAGAGCAAGCATACTTGCGCTATCTGGCCATGCTGGAGGAACTGAAGAAACAAGAGGCAGACGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CCA 72 bp | TTTGTCTTCGTCAACAGGTCTCTTCCTAGGGCCACCTaGGCATCCACTTCCGAAAGTTGTGCCTTTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: FVFVNRSLPRAT*ASTSESCAFLH Trigger: ATGCAAAAAGGCACAACTTTCGGAAGTGGATGCCCAGGTGGCCCTAGGAAGAGACCTGTTGACGAAGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 90 bp | CTTCCTAGGGCCACCTGGGCATCCACTTCCGAAAGTTGTGCCTTTTaGCATGAGTTCTCCGTATCTATGAAAGACAGCTTTTCCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: LPRATWASTSESCAF*HEFSVSMKDSFSFT Trigger: CGTGAAGGAAAAGCTGTCTTTCATAGATACGGAGAACTCATGCAAAAAGGCACAACTTTCGGAAGTGGATGCCCAGGTGGCCCTAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS TCA 72 bp | TGTCTTCTCCACCTTTTCTTCCAAGTCTCGGAGGAGTaGTTCCTTACCCAGAAGCCCACATTTCTGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: CLLHLFFQVSEE*FLTQKPTFLTQ Trigger: CTGAGTCAGAAATGTGGGCTTCTGGGTAAGGAATCACTCCTCCGAGACTTGGAAGAAAAGGTGGAGAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 72 bp | GCCACCTGGGCATCCACTTCCGAAAGTTGTGCCTTTTaGCATGAGTTCTCCGTATCTATGAAAGACAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ATWASTSESCAF*HEFSVSMKDSF Trigger: AAAGCTGTCTTTCATAGATACGGAGAACTCATGCAAAAAGGCACAACTTTCGGAAGTGGATGCCCAGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS TCA 72 bp | CTGGGCATCCACTTCCGAAAGTTGTGCCTTTTTGCATaGGTTCTCCGTATCTATGAAAGACAGCTTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LGIHFRKLCLFA*VLRIYERQLFL Trigger: AAGGAAAAGCTGTCTTTCATAGATACGGAGAACTCATGCAAAAAGGCACAACTTTCGGAAGTGGATGCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | TTCTCCGTATCTATGAAAGACAGCTTTTCCTTCACGTaGGTTATAATCTGCACGTTGCTGGTCACCTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: FSVSMKDSFSFT*VIICTLLVTLV Trigger: CACTAAGGTGACCAGCAACGTGCAGATTATAACGCACGTGAAGGAAAAGCTGTCTTTCATAGATACGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS GCA 72 bp | ATGAAAGACAGCTTTTCCTTCACGTGCGTTATAATCTaGACGTTGCTGGTCACCTTAGTGCGCAGTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: MKDSFSFTCVII*TLLVTLVRSFK Trigger: TTTAAAACTGCGCACTAAGGTGACCAGCAACGTGCAGATTATAACGCACGTGAAGGAAAAGCTGTCTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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| CDS CAA 72 bp | TTTAAAAGTTCCTCGTTTCGTTCCTCTACTTTCTCGTaGAAGGTCTGGTTCTCAATTTTGAGCTGTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FKSSSFRSSTFS*KVWFSILSCSK Trigger: CTTTGAACAGCTCAAAATTGAGAACCAGACCTTCAACGAGAAAGTAGAGGAACGAAACGAGGAACTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060100.3 |
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