Pregenerated sensors for CCDC92B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069814Ensembl transcript IDs: ENSMUST00000100866.3
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCCGAGCTGGGGCGGATCGGCCGGCTGGACTCCGCCCCATCCCTaGTCCAGCCTGGCCCGGCCTGCTTTCCCTGTTGCCAAGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: WPSWGGSAGWTPPHP*SSLARPAFPVAKAC Trigger: GCAGGCCTTGGCAACAGGGAAAGCAGGCCGGGCCAGGCTGGATCAGGGATGGGGCGGAGTCCAGCCGGCCGATCCGCCCCAGCTCGGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | GCACCTCCAAGGGAGCAGGAGTCCCTCACACAGGCAGGTTCCCGGTaGACAGAGCAGGGAGTGACAGGTGGGACAGGTATTGCAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: APPREQESLTQAGSR*TEQGVTGGTGIAAG Trigger: CCCAGCTGCAATACCTGTCCCACCTGTCACTCCCTGCTCTGTCCACCGGGAACCTGCCTGTGTGAGGGACTCCTGCTCCCTTGGAGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | GTACCTCAGCCAGGGCCAGGACCTGCTAGGGGTCCAGTGTCTGAGTaGAGAGAGGCAACTTCTCTCAGCAGCCCCAGGAAAGACCTCACA | + |
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Preference number: 1 (lower is better) Translates to: VPQPGPGPARGPVSE*REATSLSSPRKDLT Trigger: TGTGAGGTCTTTCCTGGGGCTGCTGAGAGAAGTTGCCTCTCTTCACTCAGACACTGGACCCCTAGCAGGTCCTGGCCCTGGCTGAGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | TCCCTCTGCAAAGGAGCTCCCTCTCCGGAGAAGACAATTCATCTCTaGAAACACACAAGCGGGGGCGGCTCTAGTGAGTGGCCGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SLCKGAPSPEKTIHL*KHTSGGGSSEWPSW Trigger: CCAGCTCGGCCACTCACTAGAGCCGCCCCCGCTTGTGTGTTTCCAGAGATGAATTGTCTTCTCCGGAGAGGGAGCTCCTTTGCAGAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR GCA 90 bp | CTCTGGCCTCCTTCCCTTCCACCTCCATCCAGGATGACTCTATCCTaGTGCTTGTATAGGGATGGGCTTCCCCATCTTGGCCCCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: LWPPSLPPPSRMTLS*CLYRDGLPHLGPRT Trigger: AGTTCTGGGGCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGATGGAGGTGGAAGGGAAGGAGGCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR GCA 90 bp | CCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGTGTGAAAGGGTaGTCAGGAGACCCTGGCTCCCAAATGATAAGACGCTTCACACCC | + |
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Preference number: 1 (lower is better) Translates to: PCMSPTQGWHVSVKG*SGDPGSQMIRRFTP Trigger: GGGTGTGAAGCGTCTTATCATTTGGGAGCCAGGGTCTCCTGAGCACCCTTTCACACTGACGTGCCAGCCTTGAGTGGGAGACATACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | ATCTGTGCCCCAGCTTGCCTATCTCCAATCTCCTGCACCCCTGCATaGCAAACCTGGGAAGAACCAATCAGGTCCTCTTCCACGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: ICAPACLSPISCTPA*QTWEEPIRSSSTTG Trigger: GCCAGTCGTGGAAGAGGACCTGATTGGTTCTTCCCAGGTTTGTCATGCAGGGGTGCAGGAGATTGGAGATAGGCAAGCTGGGGCACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | GAAGAGGTGGAAGTGAAGGGCAGGTCCTGTCCCAGGGCGAGAGCCTaGGGGAGTCCTCGCCTGTTGACCAATGAAGGGAATCTTTCATTA | + |
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Preference number: 1 (lower is better) Translates to: EEVEVKGRSCPRARA*GSPRLLTNEGNLSL Trigger: TAATGAAAGATTCCCTTCATTGGTCAACAGGCGAGGACTCCCTCAGGCTCTCGCCCTGGGACAGGACCTGCCCTTCACTTCCACCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | TCCCTGGGGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTaGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACTTTTCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLGMCTTKRNSPFPS*PPSHSWAVAGTFPS Trigger: GGAAGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCCCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | GAAGAAGTCAGCTACAGAGACATACTGCTCACCTCAAGGCTTGGGTaGCACACACAAATGTGGTACCTCAGCCAGGGCCAGGACCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: EEVSYRDILLTSRLG*HTQMWYLSQGQDLL Trigger: TAGCAGGTCCTGGCCCTGGCTGAGGTACCACATTTGTGTGTGTCACCCAAGCCTTGAGGTGAGCAGTATGTCTCTGTAGCTGACTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR GCA 90 bp | ACAAATCTGTGCCCCAGCTTGCCTATCTCCAATCTCCTGCACCCCTaGATGACAAACCTGGGAAGAACCAATCAGGTCCTCTTCCACGAC | + |
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Preference number: 1 (lower is better) Translates to: TNLCPSLPISNLLHP*MTNLGRTNQVLFHD Trigger: GTCGTGGAAGAGGACCTGATTGGTTCTTCCCAGGTTTGTCATGCAGGGGTGCAGGAGATTGGAGATAGGCAAGCTGGGGCACAGATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | CAGAATCCTGTGTCTGACCAGGCCTTTCTGTCACTCTCTCACTTGTaGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: QNPVSDQAFLSLSHL*KSCIIQLPPQDLHW Trigger: CCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAGTGACAGAAAGGCCTGGTCAGACACAGGATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | ACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTaGGCTGTGGCTGGGACTTTTCCTTCCAGTAGGTGGATTCCTATA | + |
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Preference number: 1 (lower is better) Translates to: TKRNSPFPSWPPSHS*AVAGTFPSSRWIPI Trigger: TATAGGAATCCACCTACTGGAAGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | CATTGGATTAAAAAGCGCAGCCAACAGAGAATTTGGAGCAGGATCTaGCTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: HWIKKRSQQRIWSRI*LPCMSPTQGWHVSV Trigger: CACACTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAAATTCTCTGTTGGCTGCGCTTTTTAATCCAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | ATTCTAAAGTGTTCCGTGCTCACCTTCAAGGACTTATCAGTGGGGTaGGGAGTAGCTACTTCTGAGTACGCGAGCCAGCTCCTAAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: ILKCSVLTFKDLSVG*GVATSEYASQLLSL Trigger: CAAGCTTAGGAGCTGGCTCGCGTACTCAGAAGTAGCTACTCCCCACCCCACTGATAAGTCCTTGAAGGTGAGCACGGAACACTTTAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR TCA 90 bp | GGAGGACATGAGTCAGGATTTCTTTTTCTTCCCGGTGGCCATGACTaGAGAAGTCAGCTACAGAGACATACTGCTCACCTCAAGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: GGHESGFLFLPGGHD*RSQLQRHTAHLKAW Trigger: CCAAGCCTTGAGGTGAGCAGTATGTCTCTGTAGCTGACTTCTTCAGTCATGGCCACCGGGAAGAAAAAGAAATCCTGACTCATGTCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | TTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTaGTACCCAGATGCCCTTAGACCCTTTCATCTGGAAGCTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LWKSCIIQLPPQDLH*YPDALRPFHLEALQ Trigger: TTGAAGAGCTTCCAGATGAAAGGGTCTAAGGGCATCTGGGTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CCA 90 bp | ACAAACAGATATCATTATCTCCGCTGTCAGCCGAGGAACAGGATTTaGGAGGTACGACAGGGTCATTTGAGGAAAGGGAGGCAGAGTACT | + |
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Preference number: 1 (lower is better) Translates to: TNRYHYLRCQPRNRI*EVRQGHLRKGRQST Trigger: AGTACTCTGCCTCCCTTTCCTCAAATGACCCTGTCGTACCTCCCAAATCCTGTTCCTCGGCTGACAGCGGAGATAATGATATCTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGATCCCTGATCCAGCCTaGCCCGGCCTGCTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LEQDLTALYVSHSRLARQIPDPA*PGLLSL Trigger: CAGGGAAAGCAGGCCGGGCCAGGCTGGATCAGGGAT...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | CCTCCTTCCCTTCCACCTCCATCCAGGATGACTCTATCCTGCTGCTaGTATAGGGATGGGCTTCCCCATCTTGGCCCCAGAACTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PPSLPPPSRMTLSCC*YRDGLPHLGPRTGP Trigger: GGGACCAGTTCTGGGGCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGATGGAGGTGGAAGGGAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGGTCACCATTCTGTTTACCACTCCCAACAGCAGAGGAGCACCCCATTACAGGGAAGGGGAGCTTaGGGGCCTAGCAGTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRGHHSVYHSQQQRSTPLQGRGA*GPSSAK Trigger: CTTGGCACTGCTAGGCCCTCAAGCTCCCCTTCCCTG...TAATGGGGTGCTCCTCTGCTGTTGGGAGTGGTAAACAGAATGGTGACCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACTTTTCCTCAGAGTACTACTGTCTaGTCCTGGGGATGGGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: PFPSWPPSHSWAVAGTFPQSTTV*SWGWGW Trigger: CCAACCCCATCCCCAGGATCAGACAGTAGTACTCTG...AGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCAGGGGAGGGGTCTGTGTGCAGGATCAGGTTAGAGTGTGCTCACTGTCTTCTTTGGCGTTCCCTCTaGAAAGGAGCTCCCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: PSGEGSVCRIRLECAHCLLWRSL*KGAPSP Trigger: CGGAGAGGGAGCTCCTTTGCAGAGGGAACGCCAAAG...AAGACAGTGAGCACACTCTAACCTGATCCTGCACACAGACCCCTCCCCTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | GGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCGGGCTCTCCTTCCTaGCTCTGGGTGCAGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GCVQPRETALSLLGHRVIPGSPS*LWVQPA Trigger: AGCTGGCTGCACCCAGAGGCAGGAAGGAGAGCCCGG...AATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | AAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACGCTGAACACCCTGGGTaGCCAGAAGAGAAAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KQPFPFLATESFLGCGWDAEHPG*PEEKRK Trigger: CTTCCTTTTCTCTTCTGGGCACCCAGGGTGTTCAGC...GTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | CTCCCTGGGGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTaGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACTTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPGDVYNQEKQPFPF*ATESFLGCGWDFSF Trigger: GAAGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCCCCAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGGGAACACCTCAGCTCTaGGAGGGCGTGACTTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LEQDLTALYVSHSRLARQGTPQL*EGVTSK Trigger: TTTAGAAGTCACGCCCTCTCAGAGCTGAGGTGTTCC...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTGGCCCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATAGTTCTCTGTAATCACTaGCACCAGGAACACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSWPQNWSPREQVALARIVLCNH*HQEHLS Trigger: GCTGAGGTGTTCCTGGTGGCAGTGATTACAGAGAAC...TATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGGGCCAAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGTCTGGGGCTCTGATATaGGGCTCAATCATGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEQDLTALYVSHSRLARQSGALI*GSIMSW Trigger: CCAGCTCATGATTGAGCCCCATATCAGAGCCCCAGA...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACGCTCACCTCAAGGCTTaGGTGACACACACAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: KQPFPFLATESFLGCGWDAHLKA*VTHTNV Trigger: CACATTTGTGTGTGTCACCCAAGCCTTGAGGTGAGC...GTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | GTAAGAGGCCCTTCTACCCTTGCCAAGACAAATCTGTGCCCCAGCTaGCCTATCTCCAATCTCCTGCACCCCTGCATGACAAACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VRGPSTLAKTNLCPS*PISNLLHPCMTNLG Trigger: TCCCAGGTTTGTCATGCAGGGGTGCAGGAGATTGGAGATAGGCAAGCTGGGGCACAGATTTGTCTTGGCAAGGGTAGAAGGGCCTCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | TGTAGGTCTGTGCAGGTGACCCAAGAAGGAAGCTTTCCTTTCCTATaGTCCTTCAGGCACCTCCAAGGGAGCAGGAGTCCCTCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: CRSVQVTQEGSFPFL*SFRHLQGSRSPSHR Trigger: CCTGTGTGAGGGACTCCTGCTCCCTTGGAGGTGCCTGAAGGACAATAGGAAAGGAAAGCTTCCTTCTTGGGTCACCTGCACAGACCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACGGACAGAGCAGGGAGTaGCAGGTGGGACAGGTATTG | + |
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Preference number: 2 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHGQSRE*QVGQVL Trigger: CAATACCTGTCCCACCTGTCACTCCCTGCTCTGTCC...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACGGACCCCAGGGGATCTaGTTCTACCATCCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHGPQGI*FYHPAL Trigger: GAGAGCTGGATGGTAGAAGCAGATCCCCTGGGGTCC...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCAGTCTCTCCCTGGGGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTCCTGGGGATGGGGTTaGATAGAGCCAGCTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: PSQSLPGDVYNQEKQPFPSWGWG*IEPAEH Trigger: GTGTTCAGCTGGCTCTATCCAACCCCATCCCCAGGA...GGGAAAGGGCTGTTTCTCTTGGTTGTACACATCCCCAGGGAGAGACTGAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | GAACCAATCAGGTCCTCTTCCACGACTGGCTTCAAGGGTCTAGCCTaGCTGTTCTCTGTAATCACTGCCACCAGGAACACCTCAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: EPIRSSSTTGFKGLA*LFSVITATRNTSAL Trigger: CAGAGCTGAGGTGTTCCTGGTGGCAGTGATTACAGAGAACAGCAAGGCTAGACCCTTGAAGCCAGTCGTGGAAGAGGACCTGATTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR TCA 90 bp | CACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGGTACTCCTGCACCCCTGCATaGCAAACCTGGGAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: HLWKSCIIQLPPQDLHWYSCTPA*QTWEEP Trigger: TGGTTCTTCCCAGGTTTGTCATGCAGGGGTGCAGGA...GTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | TTACCACTCCCAACAGCAGAGGAGCACCCCATTATCAGCAGGTTCTACAGGCTTCTTCCTGCCTCTGGGTaGAGCCAGCTGTTTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPLPTAEEHPIISRFYRLLPASG*SQLFGK Trigger: CTTTCCAAACAGCTGGCTGCACCCAGAGGCAGGAAG...AAGCCTGTAGAACCTGCTGATAATGGGGTGCTCCTCTGCTGTTGGGAGTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | CACCAGAATCCTGTGTCTGACCAGGCCTTTCTGTCACTCTCTCACTaGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: HQNPVSDQAFLSLSH*WKSCIIQLPPQDLH Trigger: GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAGTGACAGAAAGGCCTGGTCAGACACAGGATTCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | CATTGCTCACTTGTCCCTGGGTGGCTTCTAGAATGTAGGACTCCATaGCAGTTCTTCCTTCCGGGTCTGTCTACACTTGCACTGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: HCSLVPGWLLECRTP*QFFLPGLSTLALWD Trigger: GTCCCACAGTGCAAGTGTAGACAGACCCGGAAGGAAGAACTGCAATGGAGTCCTACATTCTAGAAGCCACCCAGGGACAAGTGAGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATATAGTGATGAGGTTTCTATGAATAGCTaGCACTTCCAAGAAGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: PRTGPPENRLPWRGYSDEVSMNS*HFQEAG Trigger: CCCGGCTTCTTGGAAGTGGCAGCTATTCATAGAAAC...CTCATCACTATATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGGTACCGGCTCAATCATGAGCTaGACAGAAGCTTCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TCGRVALSNSHPRISTGTGSIMS*TEASCL Trigger: AAGGCAGGAAGCTTCTGTCCAGCTCATGATTGAGCC...GGTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | GAGGGGTCTGTGTGCAGGATCAGGTTAGAGTGTGCTCACTGTCTTTaGCTTCCTGCCAAATTCCTGCTTCCTCTTACAAAGTGGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: EGSVCRIRLECAHCL*LPAKFLLPLTKWRT Trigger: TGTCCTCCACTTTGTAAGAGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACTCTAACCTGATCCTGCACACAGACCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR CAA 90 bp | CACAAACAGATATCATTATCTCCGCTGTCAGCCGAGGAACAGGATTaGGGAGGTACGACAGGGTCATTTGAGGAAAGGGAGGCAGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: HKQISLSPLSAEEQD*GGTTGSFEEREAEY Trigger: GTACTCTGCCTCCCTTTCCTCAAATGACCCTGTCGTACCTCCCAAATCCTGTTCCTCGGCTGACAGCGGAGATAATGATATCTGTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTCTTCAAACACCTCACAAACAGATATCATTATCTCCGCTGTCAGCCGAGGGGGAGGGGTCTGTGTaGAGGATCAGGTTAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: EALQTPHKQISLSPLSAEGEGSV*RIRLEC Trigger: ACACTCTAACCTGATCCTGCACACAGACCCCTCCCC...CTCGGCTGACAGCGGAGATAATGATATCTGTTTGTGAGGTGTTTGAAGAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCACCCCAAAAATATGGTTTGCAAGAGATGTAGGTCTGTGCAGGTGACCCAAAGGTGGGACAGGTATTaGAGCTGGGCTGAAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: VHPKNMVCKRCRSVQVTQRWDRY*SWAEGV Trigger: TACCCCTTCAGCCCAGCTGCAATACCTGTCCCACCT...TTGGGTCACCTGCACAGACCTACATCTCTTGCAAACCATATTTTTGGGGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| 3UTR-3UTR CCA 90 bp | GACCCAAGAAGGAAGCTTTCCTTTCCTATTGTCCTTCAGGCACCTCCAAGGGAGAAGACAATTCATCTCTaGAAACACACAAGCGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DPRRKLSFPIVLQAPPREKTIHL*KHTSGG Trigger: GCCCCCGCTTGTGTGTTTCCAGAGATGAATTGTCTT...CTCCCTTGGAGGTGCCTGAAGGACAATAGGAAAGGAAAGCTTCCTTCTTGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGTTAGAGTGTGCTCACTGTCTTTTGCTTCCTGCCAAATTCCTGCTTCCTCCAAGAGTGGTGGAGTaGGGTTCTGGGGCTCTGATA | + |
|
Preference number: 2 (lower is better) Translates to: IRLECAHCLLLPAKFLLPPRVVE*GSGALI Trigger: TATCAGAGCCCCAGAACCCCACTCCACCACTCTTGG...AGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACTCTAACCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACGATCAGGTTAGAGTGTaGTCACTGTCTTTTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHDQVRV*SLSFAS Trigger: GGAAGCAAAAGACAGTGAGCACACTCTAACCTGATC...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACTTTTCCTAAGGAAGAGGGCTATTaGTATAGTTTAAGGGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: PFPSWPPSHSWAVAGTFPKEEGY*YSLRET Trigger: AGTTTCCCTTAAACTATAGCAATAGCCCTCTTCCTT...AGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATATAGTGATGAGATGGCTTTTAGTGGGTaGATGGATAAGAAAAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PRTGPPENRLPWRGYSDEMAFSG*MDKKRA Trigger: AGCTCTTTTCTTATCCATCCACCCACTAAAAGCCAT...CTCATCACTATATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCTCAGTCTCTCCCTGGGGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTAGACCCTTTCATCTaGAAGCTCTTCAAACACCTC | + |
|
Preference number: 2 (lower is better) Translates to: PSQSLPGDVYNQEKQPFPLDPFI*KLFKHL Trigger: GAGGTGTTTGAAGAGCTTCCAGATGAAAGGGTCTAA...GGGAAAGGGCTGTTTCTCTTGGTTGTACACATCCCCAGGGAGAGACTGAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CCA 90 bp | GGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTAGCTGTTTGGAAAGCTaGGCAAGATTAGCACCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GCVQPRETALSLLGHRVISCLES*ARLAPL Trigger: TAGAGGTGCTAATCTTGCCCAGCTTTCCAAACAGCT...AATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTCACCCCAAAAATATGGTTTGCAAGAGATGTAGGTCTGTGCAGGTGACCCAAGTGCTCACTGTCTTTTaGTTCCTGCCAAATTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VHPKNMVCKRCRSVQVTQVLTVF*FLPNSC Trigger: GCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCAC...TTGGGTCACCTGCACAGACCTACATCTCTTGCAAACCATATTTTTGGGGTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGGTACCCTTTTAGTGGGTGGATaGATAAGAAAAGAGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TCGRVALSNSHPRISTGTLLVGG*IRKELS Trigger: AGAGAGCTCTTTTCTTATCCATCCACCCACTAAAAG...GGTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTATTTCCACAAGAGGGAAAGGGTATTCTGCTAACACCAGAATCCTGTGTCTGCTGTCTTTTGCTTCCTaGCAAATTCCTGCTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IISTRGKGYSANTRILCLLSFAS*QIPASS Trigger: AGAGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAG...CAGACACAGGATTCTGGTGTTAGCAGAATACCCTTTCCCTCTTGTGGAAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACGGCCTGCTTTCCCTGTaGCCAAGGCCTGCCCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: KQPFPFLATESFLGCGWDGLLSL*PRPAQR Trigger: GCGCTGGGCAGGCCTTGGCAACAGGGAAAGCAGGCC...GTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | AGGGAGCAGGAGTCCCTCACACAGGCAGGTTCCCGGTaGACAGAGCAGGGAGTGACAGGTGGGACAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: REQESLTQAGSR*TEQGVTGGTGI Trigger: AATACCTGTCCCACCTGTCACTCCCTGCTCTGTCCACCGGGAACCTGCCTGTGTGAGGGACTCCTGCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR TCA 72 bp | GAAGTGAAGGGCAGGTCCTGTCCCAGGGCGAGAGCCTaGGGGAGTCCTCGCCTGTTGACCAATGAAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: EVKGRSCPRARA*GSPRLLTNEGN Trigger: ATTCCCTTCATTGGTCAACAGGCGAGGACTCCCTCAGGCTCTCGCCCTGGGACAGGACCTGCCCTTCACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGGAAGGGAAGAGGTGGAAGTGAAGGGCAGGTCCTGTCCCAGGGCGAGAGCGGGAGTCCTCGCCTGTaGACCAATGAAGGGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRKGRGGSEGQVLSQGESGSPRL*TNEGNL Trigger: AAGATTCCCTTCATTGGTCAACAGGCGAGGACTCCC...GCTCTCGCCCTGGGACAGGACCTGCCCTTCACTTCCACCTCTTCCCTTCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | TCCCTTCCACCTCCATCCAGGATGACTCTATCCTGCTaGTTGTATAGGGATGGGCTTCCCCATCTTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLPPPSRMTLSC*LYRDGLPHLGP Trigger: GGGGCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGATGGAGGTGGAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | CCAAGAGTGGTGGAGTGGGGTTCTGGGGCTCTGATATaGGGCTCAATCATGAGCTGGACAGAAGCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PRVVEWGSGALI*GSIMSWTEASC Trigger: GCAGGAAGCTTCTGTCCAGCTCATGATTGAGCCCCATATCAGAGCCCCAGAACCCCACTCCACCACTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | AACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTaGGCTGTGGCTGGGACTTTTCCTTCCAGTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSPFPSWPPSHS*AVAGTFPSSRW Trigger: CCACCTACTGGAAGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | TGCCCCAGCTTGCCTATCTCCAATCTCCTGCACCCCTaGATGACAAACCTGGGAAGAACCAATCAGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CPSLPISNLLHP*MTNLGRTNQVL Trigger: GAGGACCTGATTGGTTCTTCCCAGGTTTGTCATGCAGGGGTGCAGGAGATTGGAGATAGGCAAGCTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | ATCTTGGCCCCAGAACTGGTCCCCCAGAGAACAGGTTaGCTTGGCGAGGATATAGTGATGAGGGTGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ILAPELVPQRTG*LGEDIVMRVQN Trigger: GTTCTGCACCCTCATCACTATATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGGGCCAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | AGCGCAGCCAACAGAGAATTTGGAGCAGGATCTGACTaGCCTGTATGTCTCCCACTCAAGGCTGGCACGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SAANREFGAGSD*PVCLPLKAGTS Trigger: TGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAAATTCTCTGTTGGCTGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | AAAGGAGCTCCCTCTCCGGAGAAGACAATTCATCTCTaGAAACACACAAGCGGGGGCGGCTCTAGTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KGAPSPEKTIHL*KHTSGGGSSEW Trigger: CCACTCACTAGAGCCGCCCCCGCTTGTGTGTTTCCAGAGATGAATTGTCTTCTCCGGAGAGGGAGCTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | TGTTCCGTGCTCACCTTCAAGGACTTATCAGTGGGGTaGGGAGTAGCTACTTCTGAGTACGCGAGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CSVLTFKDLSVG*GVATSEYASQL Trigger: GAGCTGGCTCGCGTACTCAGAAGTAGCTACTCCCCACCCCACTGATAAGTCCTTGAAGGTGAGCACGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | CAGTTCTTCCTTCCGGGTCTGTCTACACTTGCACTGTaGGACTCTCCCCTAAGAACCCTGAGTGTCCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: QFFLPGLSTLAL*DSPLRTLSVHV Trigger: CACGTGGACACTCAGGGTTCTTAGGGGAGAGTCCCACAGTGCAAGTGTAGACAGACCCGGAAGGAAGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGTGCTCACCTCAAGGCTaGGGTGACACACACAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LEQDLTALYVSHSRLARQCSPQG*GDTHKC Trigger: ACATTTGTGTGTGTCACCCAAGCCTTGAGGTGAGCA...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | CCTCAGGAACAGAAGGGTAAGAGGCCCTTCTACCCTTaGCAAGACAAATCTGTGCCCCAGCTTGCCTATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQEQKGKRPFYP*QDKSVPQLAYL Trigger: GAGATAGGCAAGCTGGGGCACAGATTTGTCTTGGCAAGGGTAGAAGGGCCTCTTACCCTTCTGTTCCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | AAAGCAGGTCAAACCAAGAGTGGTGGAGTGGGGTTCTaGGGCTCTGATATGGGGCTCAATCATGAGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KAGQTKSGGVGF*GSDMGLNHELD Trigger: GTCCAGCTCATGATTGAGCCCCATATCAGAGCCCCAGAACCCCACTCCACCACTCTTGGTTTGACCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | CTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTaGCTGGGACTTTTCCTTCCAGTAGGTGGATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSLLGHRVIPGL*LGLFLPVGGFL Trigger: TAGGAATCCACCTACTGGAAGGAAAAGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | ATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTaGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: MCTTKRNSPFPS*PPSHSWAVAGT Trigger: AGTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGTGTGCTCACTGTCTTTaGCTTCCTGCCAAATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEQDLTALYVSHSRLARQCAHCL*LPAKFL Trigger: CAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACA...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR TCA 72 bp | AAAAAGCGCAGCCAACAGAGAATTTGGAGCAGGATCTaGCTGCCCTGTATGTCTCCCACTCAAGGCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KKRSQQRIWSRI*LPCMSPTQGWH Trigger: GTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAAATTCTCTGTTGGCTGCGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | CAGGCCTTTCTGTCACTCTCTCACTTGTGGAAGAGTTaGATTATCCAACTCCCACCCCAGGATCTCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QAFLSLSHLWKS*IIQLPPQDLHW Trigger: CCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAGTGACAGAAAGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACGGTGCAGCCAGCTGTTaGGAAAGCTGGGCAAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHGAASC*ESWARL Trigger: TAATCTTGCCCAGCTTTCCAAACAGCTGGCTGCACC...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTAATCTGTGCCCCAGCTaGCCTATCTCCAATCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCVQPRETALSLLGHRVINLCPS*PISNLL Trigger: CAGGAGATTGGAGATAGGCAAGCTGGGGCACAGATT...AATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | ATTAGCACCTCTAACAGGACTGGGAAGTCTCTAAGGTaGCCTCAGGAACAGAAGGGTAAGAGGCCCTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: ISTSNRTGKSLR*PQEQKGKRPFY Trigger: GTAGAAGGGCCTCTTACCCTTCTGTTCCTGAGGCCACCTTAGAGACTTCCCAGTCCTGTTAGAGGTGCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | TATCATTATCTCCGCTGTCAGCCGAGGAACAGGATTTaGGAGGTACGACAGGGTCATTTGAGGAAAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YHYLRCQPRNRI*EVRQGHLRKGR Trigger: CCTCCCTTTCCTCAAATGACCCTGTCGTACCTCCCAAATCCTGTTCCTCGGCTGACAGCGGAGATAATGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | AGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTaGTACCCAGATGCCCTTAGACCCTTTCATCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCIIQLPPQDLH*YPDALRPFHLE Trigger: TTCCAGATGAAAGGGTCTAAGGGCATCTGGGTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTAAAAGGTGCATTGCTTaGGCGTTCCCTCTGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCVQPRETALSLLGHRVIKRCIA*AFPLQR Trigger: CCTTTGCAGAGGGAACGCCAAAGCAATGCACCTTTT...AATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCACCCCAAAAATATGGTTTGCAAGAGATGTAGGTCTGTGCAGGTGACCCAACCGCCCTACAAGGGATaGTCAGCTTTCCAAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: VHPKNMVCKRCRSVQVTQPPYKG*SAFQGQ Trigger: CTGTCCTTGGAAAGCTGACAATCCCTTGTAGGGCGG...TTGGGTCACCTGCACAGACCTACATCTCTTGCAAACCATATTTTTGGGGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR TCA 72 bp | GGCGAGAGCCTGAGGGAGTCCTCGCCTGTTGACCAATaGAGGGAATCTTTCATTATTTCCACAAGAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GESLRESSPVDQ*RESFIISTRGK Trigger: TTTCCCTCTTGTGGAAATAATGAAAGATTCCCTTCATTGGTCAACAGGCGAGGACTCCCTCAGGCTCTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | GATATAGTGATGAGGGTGCAGAACCTTGAGCTGCATTaGTCACTTGTCCCTGGGTGGCTTCTAGAATGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: DIVMRVQNLELH*SLVPGWLLECR Trigger: CCTACATTCTAGAAGCCACCCAGGGACAAGTGAGCAATGCAGCTCAAGGTTCTGCACCCTCATCACTATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | CAGAACCTTGAGCTGCATTGCTCACTTGTCCCTGGGTaGCTTCTAGAATGTAGGACTCCATTGCAGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QNLELHCSLVPG*LLECRTPLQFF Trigger: GAAGAACTGCAATGGAGTCCTACATTCTAGAAGCCACCCAGGGACAAGTGAGCAATGCAGCTCAAGGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGCTGGGCAAGATTAGCACCTCTAACAGGACTGGGAAGTCTCTAAGGTGGTTCAAGGGTCTAGCCTaGCTGTTCTCTGTAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: GKLGKISTSNRTGKSLRWFKGLA*LFSVIT Trigger: AGTGATTACAGAGAACAGCAAGGCTAGACCCTTGAA...CCACCTTAGAGACTTCCCAGTCCTGTTAGAGGTGCTAATCTTGCCCAGCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR TCA 72 bp | GAGTCAGGATTTCTTTTTCTTCCCGGTGGCCATGACTaGAGAAGTCAGCTACAGAGACATACTGCTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ESGFLFLPGGHD*RSQLQRHTAHL Trigger: GAGGTGAGCAGTATGTCTCTGTAGCTGACTTCTTCAGTCATGGCCACCGGGAAGAAAAAGAAATCCTGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGATGACTCTATCCTGCTGCTTGTATAGGGATGGGCTTCCCCATCTTGGCACTAACCACTTTACTTaGTTCCCCAGAAAAATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRMTLSCCLYRDGLPHLGTNHFT*FPRKIK Trigger: CTTGATTTTTCTGGGGAACAAAGTAAAGTGGTTAGT...GCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | AGTGTGCTCACTGTCTTTTGCTTCCTGCCAAATTCCTaGTTCCTCTTACAAAGTGGAGGACATGAGTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVLTVFCFLPNS*FLLQSGGHESG Trigger: TCCTGACTCATGTCCTCCACTTTGTAAGAGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR GCA 72 bp | GATCAGGTTAGAGTGTGCTCACTGTCTTTTGCTTCCTaGCAAATTCCTGCTTCCTCTTACAAAGTGGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DQVRVCSLSFAS*QIPASSYKVED Trigger: GTCCTCCACTTTGTAAGAGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACTCTAACCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CCA 72 bp | TCCACTGGTACCCAGATGCCCTTAGACCCTTTCATCTaGAAGCTCTTCAAACACCTCACAAACAGATATCAT | + |
|
Preference number: 3 (lower is better) Translates to: STGTQMPLDPFI*KLFKHLTNRYH Trigger: ATGATATCTGTTTGTGAGGTGTTTGAAGAGCTTCCAGATGAAAGGGTCTAAGGGCATCTGGGTACCAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR TCA 72 bp | AAAATATGGTTTGCAAGAGATGTAGGTCTGTGCAGGTaGCCCAAGAAGGAAGCTTTCCTTTCCTATTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KIWFARDVGLCR*PKKEAFLSYCP Trigger: AGGACAATAGGAAAGGAAAGCTTCCTTCTTGGGTCACCTGCACAGACCTACATCTCTTGCAAACCATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGTGACACACACAAATGTGGTACCTCAGCCAGGGCCAGGACCTGCTAGGGCCGCAGCTCCTCGTTaGCCGCCGCCCGTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWVTHTNVVPQPGPGPARAAAPR*PPPVPP Trigger: TGGAGGCACGGGCGGCGGCCAACGAGGAGCTGCGGC...CCTAGCAGGTCCTGGCCCTGGCTGAGGTACCACATTTGTGTGTGTCACCCAAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCAGGATCTGACTGCCCTGTATGTCTCCCACTCAAGGCTGGCACGTCAGATGGCAACCCAGGCCTaGGCCCCACCTGCGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEQDLTALYVSHSRLARQMATQA*APPADP Trigger: CGGGTCCGCAGGTGGGGCCCAGGCCTGGGTTGCCAT...CTGACGTGCCAGCCTTGAGTGGGAGACATACAGGGCAGTCAGATCCTGCTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGCTTGAGGGCCTAGCAGTGCCAAGTGCCACCGTGTTCCTTCCAGTAGGCCTCAGGATCTCCAGGTaGAGGTCTCGAAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GELEGLAVPSATVFLPVGLRISR*RSRSRA Trigger: GGCCCTGCTTCGAGACCTGCACCTGGAGATCCTGAG...GCCTACTGGAAGGAACACGGTGGCACTTGGCACTGCTAGGCCCTCAAGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCAGTCTCTCCCTGGGGATGTGTACAACCAAGAGAAACAGCCCTTTCCCCCGTGGCGCGATGGCTaGGGCGCCGCAGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQSLPGDVYNQEKQPFPPWRDG*GAAAPP Trigger: TGGAGGAGCTGCGGCGCCGCAGCCATCGCGCCACGG...GGGAAAGGGCTGTTTCTCTTGGTTGTACACATCCCCAGGGAGAGACTGAGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGTGACACACACAAATGTGGTACCTCAGCCAGGGCCAGGACCTGCTAGGGGGACACGGTATCCATaGCAACCCAGGCCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AWVTHTNVVPQPGPGPARGTRYP*QPRPGP Trigger: GGGCCCAGGCCTGGGTTGCCATGGATACCGTGTCCC...CCTAGCAGGTCCTGGCCCTGGCTGAGGTACCACATTTGTGTGTGTCACCCAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGTCACCATTCTGTTTACCACTCCCAACAGCAGAGGAGCACCCCATTAGCCCGTGCCTCCAGCTaGGACTCTAGCGCGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGHHSVYHSQQQRSTPLARASS*DSSARH Trigger: GTGCCGCGCGCTAGAGTCGCAGCTGGAGGCACGGGC...TAATGGGGTGCTCCTCTGCTGTTGGGAGTGGTAAACAGAATGGTGACCCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATATAGTGATGAGTCGCTGGGCCCAGGGTaGGGGTCGCCTTGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTGPPENRLPWRGYSDESLGPG*GSPWYR Trigger: CCTGTACCAAGGCGACCCGCACCCTGGGCCCAGCGA...CTCATCACTATATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACGCTGGGCGTGGCGACTaGGCTCTCGCTGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHAGRGD*ALAGPR Trigger: CCTGGGCCCAGCGAGAGCGCAGTCGCCACGCCCAGC...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | GTAGCTACTTCTGAGTACGCGAGCCAGCTCCTAAGCTaGCCTCTCCCGAGCAAAAGGCTGGGCAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VATSEYASQLLS*PLPSKRLGRAG Trigger: CCCAGCCCTGCCCAGCCTTTTGCTCGGGAGAGGCAAGCTTAGGAGCTGGCTCGCGTACTCAGAAGTAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACCCTCCGAGCGCAGGCTaGAGCGCAGCGCGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHPPSAG*SAARTP Trigger: TGGTGTCCGCGCTGCGCTGCAGCCTGCGCTCGGAGG...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | TTACCACTCCCAACAGCAGAGGAGCACCCCATTATCAGCAGGTTCTACAGGCTTTGGTGTGGCACGGGGTaGGGGGCATCTTGGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPTAEEHPIISRFYRLWCGTG*GASWSG Trigger: GCCGGACCAAGATGCCCCGCACCCCGTGCCACACCA...AAGCCTGTAGAACCTGCTGATAATGGGGTGCTCCTCTGCTGTTGGGAGTGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CCA 90 bp | CACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGGTACTGGTACAGGGGCTCCTaGTGTGGCACGGGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLWKSCIIQLPPQDLHWYWYRGS*CGTGCG Trigger: CCCGCACCCCGTGCCACACCAGGAGCCCCTGTACCA...GTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGGATGACTCTATCCTGCTGCTTGTATAGGGATGGGCTTCCCCATCTTGGCGCTTCGGTGTGCTTCTaGAGCTCGGTGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRMTLSCCLYRDGLPHLGASVCF*SSVPST Trigger: GGTGCTGGGCACCGAGCTGCAGAAGCACACCGAAGC...GCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGGCCCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATACGAAGCAGGGCCATCTaGTCCTTTTTCAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSWPQNWSPREQVALARIRSRAI*SFFRKL Trigger: CAGCTTCCTGAAAAAGGAGCAGATGGCCCTGCTTCG...TATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGGGCCAAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | GTGCAGGTGACCCAAGAAGGAAGCTTTCCTTTCCTATaGTCCTTCAGGCACCTCCAAGGGAGCAGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQVTQEGSFPFL*SFRHLQGSRSP Trigger: GGGACTCCTGCTCCCTTGGAGGTGCCTGAAGGACAATAGGAAAGGAAAGCTTCCTTCTTGGGTCACCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | GATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTaGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DVYNQEKQPFPF*ATESFLGCGWD Trigger: GTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | CTTCCACCTCCATCCAGGATGACTCTATCCTGCTGCTaGTATAGGGATGGGCTTCCCCATCTTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPSRMTLSCC*YRDGLPHLGPR Trigger: TCTGGGGCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGATGGAGGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACTGGTACCTGCACGCTCTGGATCTaGTGCTCCAGGGACACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TCGRVALSNSHPRISTGTCTLWI*CSRDTV Trigger: TACCGTGTCCCTGGAGCATCAGATCCAGAGCGTGCA...GGTACCAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACTGGTCCCCCAGAGAACAGGTTGCCTTGGCGAGGATATAGTGATGAGTTCAGGAAGCTGATGTaGCGTTGCACGCTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PRTGPPENRLPWRGYSDEFRKLM*RCTLWI Trigger: GATCCAGAGCGTGCAACGCCACATCAGCTTCCTGAA...CTCATCACTATATCCTCGCCAAGGCAACCTGTTCTCTGGGGGACCAGTTCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | AGGTCCTCTTCCACGACTGGCTTCAAGGGTCTAGCCTaGCTGTTCTCTGTAATCACTGCCACCAGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: RSSSTTGFKGLA*LFSVITATRNT Trigger: GGTGTTCCTGGTGGCAGTGATTACAGAGAACAGCAAGGCTAGACCCTTGAAGCCAGTCGTGGAAGAGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | CCTTCTACCCTTGCCAAGACAAATCTGTGCCCCAGCTaGCCTATCTCCAATCTCCTGCACCCCTGCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSTLAKTNLCPS*PISNLLHPCMT Trigger: TGTCATGCAGGGGTGCAGGAGATTGGAGATAGGCAAGCTGGGGCACAGATTTGTCTTGGCAAGGGTAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR TCA 90 bp | TCCAGGATGACTCTATCCTGCTGCTTGTATAGGGATGGGCTTCCCCATCTTGGCGCCTCTTCTTGTTGGTaGGACTGGACCTCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRMTLSCCLYRDGLPHLGASSCW*DWTSLI Trigger: GATGAGAGAGGTCCAGTCTCACCAACAAGAAGAGGC...GCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGTCATCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | CCAGGCCTTTCTGTCACTCTCTCACTTGTGGAAGAGTaGCATTATCCAACTCCCACCCCAGGATCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLSVTLSLVEE*HYPTPTPGSPL Trigger: CAGTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAGTGACAGAAAGGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCACTTGTGGAAGAGTTGCATTATCCAACTCCCACCCCAGGATCTCCACCCTTTTTCAGGAAGCTaGTGTGGCGTTGCACGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLWKSCIIQLPPQDLHPFSGS*CGVARS Trigger: AGAGCGTGCAACGCCACATCAGCTTCCTGAAAAAGG...GTGGAGATCCTGGGGTGGGAGTTGGATAATGCAACTCTTCCACAAGTGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR GCA 90 bp | GGATGTGTACAACCAAGAGAAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTTCTGAGCAGCGTTTCTaGAGCCTCAGGATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCVQPRETALSLLGHRVISEQRF*SLRISR Trigger: CCTGGAGATCCTGAGGCTGCAGAAACGCTGCTCAGA...AATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTTCTCTTGGTTGTACACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | AAGTCAGCTACAGAGACATACTGCTCACCTCAAGGCTaGGGTGACACACACAAATGTGGTACCTCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSATETYCSPQG*GDTHKCGTSAR Trigger: CCTGGCTGAGGTACCACATTTGTGTGTGTCACCCAAGCCTTGAGGTGAGCAGTATGTCTCTGTAGCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | CTTGTCCCTGGGTGGCTTCTAGAATGTAGGACTCCATaGCAGTTCTTCCTTCCGGGTCTGTCTACACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVPGWLLECRTP*QFFLPGLSTLA Trigger: TGCAAGTGTAGACAGACCCGGAAGGAAGAACTGCAATGGAGTCCTACATTCTAGAAGCCACCCAGGGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | ATATCATTATCTCCGCTGTCAGCCGAGGAACAGGATTaGGGAGGTACGACAGGGTCATTTGAGGAAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLSPLSAEEQD*GGTTGSFEERE Trigger: CTCCCTTTCCTCAAATGACCCTGTCGTACCTCCCAAATCCTGTTCCTCGGCTGACAGCGGAGATAATGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| 3UTR CAA 72 bp | GTGTGCAGGATCAGGTTAGAGTGTGCTCACTGTCTTTaGCTTCCTGCCAAATTCCTGCTTCCTCTTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCRIRLECAHCL*LPAKFLLPLTK Trigger: CTTTGTAAGAGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACTCTAACCTGATCCTGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 90 bp | GGCGCCGCAGCTCCTCCAGAAAGCGGCGCTCCTCCGAGCGCAGGCTaGAGCGCAGCGCGGACACCAGCGCCTCCCGCTGTGCCACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAAAPPESGAPPSAG*SAARTPAPPAVPPP Trigger: GGGAGGTGGCACAGCGGGAGGCGCTGGTGTCCGCGCTGCGCTGCAGCCTGCGCTCGGAGGAGCGCCGCTTTCTGGAGGAGCTGCGGCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS CCA 90 bp | TCCTGGTGTGGCACGGGGTGCGGGGCATCTTGGTCCGGCATCTCCTaGCGTAGCAGAGGGCGAGGACCACGGGCGCCGGGCCGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWCGTGCGASWSGIS*RSRGRGPRAPGRGG Trigger: GCCGCCGCGGCCCGGCGCCCGTGGTCCTCGCCCTCTGCTACGCCAGGAGATGCCGGACCAAGATGCCCCGCACCCCGTGCCACACCAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 90 bp | ACCTCCCGCCGCAGCTCCTCGTTGGCCGCCGCCCGTGCCTCCAGCTaGGACTCTAGCGCGCGGCACTTGTCCTCCAGCTCTCGGGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSRRSSSLAAARASS*DSSARHLSSSSRDA Trigger: GGCGTCCCGAGAGCTGGAGGACAAGTGCCGCGCGCTAGAGTCGCAGCTGGAGGCACGGGCGGCGGCCAACGAGGAGCTGCGGCGGGAGGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 90 bp | GGCAGGAGAGGTAGGCGGCCGCTTCGGTGTGCTTCTGCAGCTCGGTaGCCAGCACCGTGGCGCGATGGCTGCGGCGCCGCAGCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRGRRPLRCASAAR*PAPWRDGCGAAAPP Trigger: TGGAGGAGCTGCGGCGCCGCAGCCATCGCGCCACGGTGCTGGGCACCGAGCTGCAGAAGCACACCGAAGCGGCCGCCTACCTCTCCTGCC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CAA 90 bp | AAACAGCCCTTTCCCTTCTTGGCCACCGAGTCATTCCTGGGCTGTGGCTGGGACGGGGTGCGGGGCATCTaGGTCCGGCATCTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KQPFPFLATESFLGCGWDGVRGI*VRHLLA Trigger: CGCCAGGAGATGCCGGACCAAGATGCCCCGCACCCC...GTCCCAGCCACAGCCCAGGAATGACTCGGTGGCCAAGAAGGGAAAGGGCTGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS TCA 90 bp | GCGCGGCACTTGTCCTCCAGCTCTCGGGACGCCTCTTCTTGTTGGTaGGACTGGACCTCTCTCATCTCCAGGTCGTGGGTCAGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARHLSSSSRDASSCW*DWTSLISRSWVSSE Trigger: CTCAGAGCTGACCCACGACCTGGAGATGAGAGAGGTCCAGTCTCACCAACAAGAAGAGGCGTCCCGAGAGCTGGAGGACAAGTGCCGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS TCA 90 bp | TGCTCCTTTTTCAGGAAGCTGATGTGGCGTTGCACGCTCTGGATCTaGTGCTCCAGGGACACGGTATCCATGGCAACCCAGGCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSFFRKLMWRCTLWI*CSRDTVSMATQAWA Trigger: GGCCCAGGCCTGGGTTGCCATGGATACCGTGTCCCTGGAGCATCAGATCCAGAGCGTGCAACGCCACATCAGCTTCCTGAAAAAGGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS TCA 90 bp | GGTGCAGGTCTCGAAGCAGGGCCATCTGCTCCTTTTTCAGGAAGCTaGTGTGGCGTTGCACGCTCTGGATCTGATGCTCCAGGGACACGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGLEAGPSAPFSGS*CGVARSGSDAPGTR Trigger: CCGTGTCCCTGGAGCATCAGATCCAGAGCGTGCAACGCCACATCAGCTTCCTGAAAAAGGAGCAGATGGCCCTGCTTCGAGACCTGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS TCA 90 bp | TTGGTGAGACTGGACCTCTCTCATCTCCAGGTCGTGGGTCAGCTCTaGGCAGCGTTTCTGCAGCCTCAGGATCTCCAGGTGCAGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVRLDLSHLQVVGQL*AAFLQPQDLQVQVS Trigger: CGAGACCTGCACCTGGAGATCCTGAGGCTGCAGAAACGCTGCTCAGAGCTGACCCACGACCTGGAGATGAGAGAGGTCCAGTCTCACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 90 bp | TGGGTCAGCTCTGAGCAGCGTTTCTGCAGCCTCAGGATCTCCAGGTaGAGGTCTCGAAGCAGGGCCATCTGCTCCTTTTTCAGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVSSEQRFCSLRISR*RSRSRAICSFFRKL Trigger: CAGCTTCCTGAAAAAGGAGCAGATGGCCCTGCTTCGAGACCTGCACCTGGAGATCCTGAGGCTGCAGAAACGCTGCTCAGAGCTGACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGGGGAGGGGTCTGTGTGCAGGATCAGGTTAGAGTGTGCTCACTGTCTTGAAGCTGATGTGGCGTaGCACGCTCTGGATCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSGEGSVCRIRLECAHCLEADVA*HALDLM Trigger: CATCAGATCCAGAGCGTGCAACGCCACATCAGCTTC...AAGACAGTGAGCACACTCTAACCTGATCCTGCACACAGACCCCTCCCCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CAA 90 bp | GAAGCTCTTCAAACACCTCACAAACAGATATCATTATCTCCGCTGTCAGCCGAGTCTAGCGCGCGGCACTaGTCCTCCAGCTCTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EALQTPHKQISLSPLSAESSARH*SSSSRD Trigger: GTCCCGAGAGCTGGAGGACAAGTGCCGCGCGCTAGA...CTCGGCTGACAGCGGAGATAATGATATCTGTTTGTGAGGTGTTTGAAGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGGTTAGAGTGTGCTCACTGTCTTTTGCTTCCTGCCAAATTCCTGCTTCCTGGACGCCTCTTCTTGTaGGTGAGACTGGACCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRLECAHCLLLPAKFLLPGRLFL*VRLDLS Trigger: AGAGAGGTCCAGTCTCACCAACAAGAAGAGGCGTCC...AGGAAGCAGGAATTTGGCAGGAAGCAAAAGACAGTGAGCACACTCTAACCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | GCTCCTCCAGAAAGCGGCGCTCCTCCGAGCGCAGGCTaGAGCGCAGCGCGGACACCAGCGCCTCCCGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: APPESGAPPSAG*SAARTPAPPAV Trigger: CACAGCGGGAGGCGCTGGTGTCCGCGCTGCGCTGCAGCCTGCGCTCGGAGGAGCGCCGCTTTCTGGAGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | GGTAGGCGGCCGCTTCGGTGTGCTTCTGCAGCTCGGTaGCCAGCACCGTGGCGCGATGGCTGCGGCGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRRPLRCASAAR*PAPWRDGCGAA Trigger: TGCGGCGCCGCAGCCATCGCGCCACGGTGCTGGGCACCGAGCTGCAGAAGCACACCGAAGCGGCCGCCTACC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | CTGGGCGTGGCGACTGCGCTCTCGCTGGGCCCAGGGTaGGGGTCGCCTTGGTACAGGGGCTCCTGGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVATALSLGPG*GSPWYRGSWCG Trigger: GCCACACCAGGAGCCCCTGTACCAAGGCGACCCGCACCCTGGGCCCAGCGAGAGCGCAGTCGCCACGCCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | CTACTCAGGATCCCCTGGGGCGCTGGGCGTGGCGACTaGGCTCTCGCTGGGCCCAGGGTGCGGGTCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRIPWGAGRGD*ALAGPRVRVAL Trigger: CAAGGCGACCCGCACCCTGGGCCCAGCGAGAGCGCAGTCGCCACGCCCAGCGCCCCAGGGGATCCTGAGTAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS CCA 72 bp | ACTGCGCTCTCGCTGGGCCCAGGGTGCGGGTCGCCTTaGTACAGGGGCTCCTGGTGTGGCACGGGGTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TALSLGPGCGSP*YRGSWCGTGCG Trigger: CCCGCACCCCGTGCCACACCAGGAGCCCCTGTACCAAGGCGACCCGCACCCTGGGCCCAGCGAGAGCGCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS CAA 72 bp | GACTGCGCTCTCGCTGGGCCCAGGGTGCGGGTCGCCTaGGTACAGGGGCTCCTGGTGTGGCACGGGGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DCALAGPRVRVA*VQGLLVWHGVR Trigger: CCGCACCCCGTGCCACACCAGGAGCCCCTGTACCAAGGCGACCCGCACCCTGGGCCCAGCGAGAGCGCAGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | TCTGCAGCTCGGTGCCCAGCACCGTGGCGCGATGGCTaGGGCGCCGCAGCTCCTCCAGAAAGCGGCGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAARCPAPWRDG*GAAAPPESGAP Trigger: AGGAGCGCCGCTTTCTGGAGGAGCTGCGGCGCCGCAGCCATCGCGCCACGGTGCTGGGCACCGAGCTGCAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS GCA 72 bp | CGCAGCTCCTCGTTGGCCGCCGCCCGTGCCTCCAGCTaGGACTCTAGCGCGCGGCACTTGTCCTCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSSLAAARASS*DSSARHLSSSS Trigger: AGAGCTGGAGGACAAGTGCCGCGCGCTAGAGTCGCAGCTGGAGGCACGGGCGGCGGCCAACGAGGAGCTGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
||
| CDS CAA 72 bp | GCCCGTGCCTCCAGCTGCGACTCTAGCGCGCGGCACTaGTCCTCCAGCTCTCGGGACGCCTCTTCTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ARASSCDSSARH*SSSSRDASSCW Trigger: CCAACAAGAAGAGGCGTCCCGAGAGCTGGAGGACAAGTGCCGCGCGCTAGAGTCGCAGCTGGAGGCACGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| CDS TCA 72 bp | CTGGACCTCTCTCATCTCCAGGTCGTGGGTCAGCTCTaGGCAGCGTTTCTGCAGCCTCAGGATCTCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LDLSHLQVVGQL*AAFLQPQDLQV Trigger: CACCTGGAGATCCTGAGGCTGCAGAAACGCTGCTCAGAGCTGACCCACGACCTGGAGATGAGAGAGGTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| CDS TCA 72 bp | TTGTCCTCCAGCTCTCGGGACGCCTCTTCTTGTTGGTaGGACTGGACCTCTCTCATCTCCAGGTCGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSSSSRDASSCW*DWTSLISRSWV Trigger: GACCCACGACCTGGAGATGAGAGAGGTCCAGTCTCACCAACAAGAAGAGGCGTCCCGAGAGCTGGAGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| CDS CAA 72 bp | GCACTTGTCCTCCAGCTCTCGGGACGCCTCTTCTTGTaGGTGAGACTGGACCTCTCTCATCTCCAGGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: ALVLQLSGRLFL*VRLDLSHLQVV Trigger: CACGACCTGGAGATGAGAGAGGTCCAGTCTCACCAACAAGAAGAGGCGTCCCGAGAGCTGGAGGACAAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| CDS CAA 90 bp | TCGAAGCAGGGCCATCTGCTCCTTTTTCAGGAAGCTGATGTGGCGTaGCACGCTCTGGATCTGATGCTCCAGGGACACGGTATCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SKQGHLLLFQEADVA*HALDLMLQGHGIHG Trigger: GCCATGGATACCGTGTCCCTGGAGCATCAGATCCAGAGCGTGCAACGCCACATCAGCTTCCTGAAAAAGGAGCAGATGGCCCTGCTTCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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| CDS TCA 72 bp | TTCAGGAAGCTGATGTGGCGTTGCACGCTCTGGATCTaGTGCTCCAGGGACACGGTATCCATGGCAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRKLMWRCTLWI*CSRDTVSMATQ Trigger: CTGGGTTGCCATGGATACCGTGTCCCTGGAGCATCAGATCCAGAGCGTGCAACGCCACATCAGCTTCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100866.3 |
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