Pregenerated sensors for CCDC91 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030301Ensembl transcript IDs: ENSMUST00000032441.14, ENSMUST00000156106.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCCAGGAAGCAGAAGCACTGCAGGACGTGAGCACAACATCCCGTaGGTCCAAACTACTCATGGTTTCATGCTGGAGCTCACTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SPGSRSTAGREHNIP*VQTTHGFMLELTAH Trigger: ATGAGCAGTGAGCTCCAGCATGAAACCATGAGTAGTTTGGACCCACGGGATGTTGTGCTCACGTCCTGCAGTGCTTCTGCTTCCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CCA 90 bp | ATGAAACATGATCTCAAGCCTTTGAAGAATGGCAGGAAGCAAGCCTaGGCCACACATTCCAGTTCACCCAGAGCAGCTGCTCTAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: MKHDLKPLKNGRKQA*ATHSSSPRAAALNL Trigger: CAGGTTTAGAGCAGCTGCTCTGGGTGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATTCTTCAAAGGCTTGAGATCATGTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CCA 90 bp | TGCCATCAGGTTACCAGAAGCTGTATAGGCTTACCTGAAGCACTCTaGATAACACACAGATTTCCCATGACTTTGGGTCATAGGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: CHQVTRSCIGLPEAL*ITHRFPMTLGHRHS Trigger: AGAGTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGGTAAGCCTATACAGCTTCTGGTAACCTGATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CCA 90 bp | AATGCATGGCTACACAGTGGTTGCTCCCTACACATCACCTTGAGGTaGTCACAAGGTAATCCTTTACCAAATACAGTGCCATCAGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: NAWLHSGCSLHITLR*SQGNPLPNTVPSGY Trigger: GTAACCTGATGGCACTGTATTTGGTAAAGGATTACCTTGTGACCACCTCAAGGTGATGTGTAGGGAGCAACCACTGTGTAGCCATGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR TCA 90 bp | GTAGATTTCTGTTATGATTTTTACCAGATATTCAATTATGAAACATaGTCTCAAGCCTTTGAAGAATGGCAGGAAGCAAGCCTGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: VDFCYDFYQIFNYET*SQAFEEWQEASLGH Trigger: GTGGCCCAGGCTTGCTTCCTGCCATTCTTCAAAGGCTTGAGATCATGTTTCATAATTGAATATCTGGTAAAAATCATAACAGAAATCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR-3UTR TCA 90 bp | AATGGCAGGAAGCAAGCCTGGGCCACACATTCCAGTTCACCCAGAGCAGCTGCTCCCTACACATCACCTTaGGGTGGTCACAAGGTAATC | + |
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Preference number: 2 (lower is better) Translates to: NGRKQAWATHSSSPRAAAPYTSP*GGHKVI Trigger: GATTACCTTGTGACCACCTCAAGGTGATGTGTAGGG...AGCAGCTGCTCTGGGTGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR-3UTR GCA 90 bp | AATGGCAGGAAGCAAGCCTGGGCCACACATTCCAGTTCACCCAGAGCAGCTGCTTCAGAACAATGGCCATaGCAATGTGTCTGCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: NGRKQAWATHSSSPRAAASEQWP*QCVCPL Trigger: GAGTGGGCAGACACATTGGCATGGCCATTGTTCTGA...AGCAGCTGCTCTGGGTGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR-3UTR TCA 90 bp | GTCGCACTCCGGATACTTTATTCCACATTGGCATCAGTAGCTCTGTCCGCGGGGTCCTACCACAAACTCTaGAGATGGCTCACAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: VALRILYSTLASVALSAGSYHKL*RWLTME Trigger: CTCCATTGTGAGCCATCTTCAGAGTTTGTGGTAGGA...CCCCGCGGACAGAGCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGAGGTCTGGGTCTGTAGAAACTaGTGTGGCTCATTCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PGQLVVFTFGKSMETYEVWVCRN*CGSFWN Trigger: GTTCCAGAATGAGCCACAGCAGTTTCTACAGACCCA...GACCTCATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CAA 90 bp | ATGATTTTTACCAGATATTCAATTATGAAACATGATCTCAAGCCTTaGAAGAATGGCAGGAAGCAAGCCTGGGCCACACATTCCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MIFTRYSIMKHDLKP*KNGRKQAWATHSSS Trigger: TGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATTCTTCAAAGGCTTGAGATCATGTTTCATAATTGAATATCTGGTAAAAATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CCA 72 bp | GCTGCTTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTaGGCAGGCTTGACGACCGATGGATCTGCTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: AASGRRRKTASE*AGLTTDGSAVS Trigger: AGACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR TCA 72 bp | GTGGTCATGGTCCAGGATAAGCTCCGGAGAAGCTGGTaGGAGTCGCACTCCGGATACTTTATTCCACATTGG | + |
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Preference number: 3 (lower is better) Translates to: VVMVQDKLRRSW*ESHSGYFIPHW Trigger: CCAATGTGGAATAAAGTATCCGGAGTGCGACTCTCACCAGCTTCTCCGGAGCTTATCCTGGACCATGACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| 3UTR CCA 72 bp | ACATCCCGTGGGTCCAAACTACTCATGGTTTCATGCTaGAGCTCACTGCTCATGAATTATGAACGTCCCGAT | + |
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Preference number: 3 (lower is better) Translates to: TSRGSKLLMVSC*SSLLMNYERPD Trigger: ATCGGGACGTTCATAATTCATGAGCAGTGAGCTCCAGCATGAAACCATGAGTAGTTTGGACCCACGGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CCA 72 bp | CTACACAGTGGTTGCTCCCTACACATCACCTTGAGGTaGTCACAAGGTAATCCTTTACCAAATACAGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LHSGCSLHITLR*SQGNPLPNTVP Trigger: TGGCACTGTATTTGGTAAAGGATTACCTTGTGACCACCTCAAGGTGATGTGTAGGGAGCAACCACTGTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR GCA 72 bp | CAATGTGTCTGCCCACTCTACTTAGAATCAAGTAAATaGATGGCTACACAGTGGTTGCTCCCTACACATCAC | + |
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Preference number: 3 (lower is better) Translates to: QCVCPLYLESSK*MATQWLLPTHH Trigger: GTGATGTGTAGGGAGCAACCACTGTGTAGCCATGCATTTACTTGATTCTAAGTAGAGTGGGCAGACACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | CTCGCTGCTTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGATCCTCTGCTGCTCCTaGACAGCGGCCTGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LAASGRRRKTASEWAGLTILCCS*TAAWMA Trigger: GGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGGAT...CGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAAGCAGCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | AATGGCAGGAAGCAAGCCTGGGCCACACATTCCAGTTCACCCAGAGCAGCTGCTGCACAGCGGCCTGGATaGCCTCTGCCACCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: NGRKQAWATHSSSPRAAAAQRPG*PLPPSP Trigger: AGGAGAGGGTGGCAGAGGCCATCCAGGCCGCTGTGC...AGCAGCTGCTCTGGGTGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | CCAGTGGATGGAGATGAGTGGTCATGGTCCAGGATAAGCTCCGGAGAAGCTGGTACCCTGCAGGAAAGGTaGCCCAGGGGACAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PVDGDEWSWSRISSGEAGTLQER*PRGQQE Trigger: CTCCTGCTGTCCCCTGGGCCACCTTTCCTGCAGGGT...ACCAGCTTCTCCGGAGCTTATCCTGGACCATGACCACTCATCTCCATCCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| CDS-3UTR TCA 90 bp | CTCGCTGCTTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGCTACGATTGCGGCCTTaGCAGCTTCCTGACTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LAASGRRRKTASEWAGLTLRLRP*QLPDSS Trigger: GGATGAGTCAGGAAGCTGTCAAGGCCGCAATCGTAG...CGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAAGCAGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | CTCGCTGCTTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGATTAGAGCACTCAGCTaGTTCTGGGCGCAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LAASGRRRKTASEWAGLTIRALS*FWAQER Trigger: CCTCTCCTGCGCCCAGAAGCAGCTGAGTGCTCTAAT...CGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAAGCAGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCTCGCACTCCGGATACTaGAGGAAAGGTGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EKNSFRVGRLDDRWICCVSHSGY*RKGGPG Trigger: CCCTGGGCCACCTTTCCTGCAGTATCCGGAGTGCGA...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | TTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGGCAGGAGACACAGCTTaGTTTCCTCCTTGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: FWAQEKNSFRVGRLDDRWAGDTA*FPPCSP Trigger: TGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGC...CCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCATACTGCAGGAAAGGTaGCCCAGGGGACAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKNSFRVGRLDDRWICCVILQER*PRGQQE Trigger: CTCCTGCTGTCCCCTGGGCCACCTTTCCTGCAGTAT...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | TTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGAGGGCAAGTGCTCCATaGCTCGGCTCATCCGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: FWAQEKNSFRVGRLDDRWRASAP*LGSSVK Trigger: TTTAACGGATGAGCCGAGCCATGGAGCACTTGCCCT...CCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | CCTGAAGCACTCTGGATAACACACAGATTTCCCATGACTTTGGGTCATAGGCACGGAACAGCTCCAGGCTaGACAGGCTACGCTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PEALWITHRFPMTLGHRHGTAPG*TGYAGG Trigger: CCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTGTTCC...GTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | TATGAGGTCACGTGTGGGGAAGTGGTCAGGTTAGTCAGAACAATGGCCATGCCAGCACTCAGCTGCTTCTaGGCGCAGGAGAGGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: YEVTCGEVVRLVRTMAMPALSCF*AQERNS Trigger: GCTGTTCCTCTCCTGCGCCCAGAAGCAGCTGAGTGC...TGGCATGGCCATTGTTCTGACTAACCTGACCACTTCCCCACACGTGACCTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CAA 72 bp | CTGGTGAGAGTCGCACTCCGGATACTTTATTCCACATaGGCATCAGTAGCTCTGTCCGCGGGGTCCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: LVRVALRILYST*ASVALSAGSYH Trigger: GTGGTAGGACCCCGCGGACAGAGCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGACTCTCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| CDS-3UTR CCA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCGAGGGAGGTGGCCAGTaGATGGAGATGAGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EKNSFRVGRLDDRWICCVEGGGQ*MEMSGH Trigger: ATGACCACTCATCTCCATCCACTGGCCACCTCCCTC...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | AATGGCAGGAAGCAAGCCTGGGCCACACATTCCAGTTCACCCAGAGCAGCTGCTATGCGTATCATCTGCTaGGGAAATGACAGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: NGRKQAWATHSSSPRAAAMRIIC*GNDSIW Trigger: CCAGATGCTGTCATTTCCTCAGCAGATGATACGCAT...AGCAGCTGCTCTGGGTGAACTGGAATGTGTGGCCCAGGCTTGCTTCCTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | TTCTGGGCGCAGGAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGTTACGGCTTCCTCCATaGCCTTTTCACTTCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FWAQEKNSFRVGRLDDRWLRLPP*PFHFSS Trigger: AGAGGAGAAGTGAAAAGGCCATGGAGGAAGCCGTAA...CCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTCCTGCGCCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCTCACGGTATCTGGCTTaGAAGGATACAGCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: EKNSFRVGRLDDRWICCVSRYLA*KDTASC Trigger: GCAGGATGCTGTATCCTTTCAAGCCAGATACCGTGA...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | GTGGATGGAGATGAGTGGTCATGGTCCAGGATAAGCTCCGGAGAAGCTGGTGAGGCTTGGTTTCCTCCTTaGTCACCATCAAAGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VDGDEWSWSRISSGEAGEAWFPP*SPSKVS Trigger: AGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGC...CTCACCAGCTTCTCCGGAGCTTATCCTGGACCATGACCACTCATCTCCATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| CDS-3UTR TCA 90 bp | TATGAGGTCACGTGTGGGGAAGTGGTCAGGTTAGTCAGAACAATGGCCATGCCATGCTCCTGTGACTGCTaGGTCAAAGCTTCCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: YEVTCGEVVRLVRTMAMPCSCDC*VKASWI Trigger: AATCCAGGAAGCTTTGACTCAGCAGTCACAGGAGCA...TGGCATGGCCATTGTTCTGACTAACCTGACCACTTCCCCACACGTGACCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | GAAGCTGGTGAGAGTCGCACTCCGGATACTTTATTCCACATTGGCATCAGTAGCGCAGGAGACACAGCTTaGTTTCCTCCTTGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: EAGESRTPDTLFHIGISSAGDTA*FPPCSP Trigger: TGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGC...GCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGACTCTCACCAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
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| CDS-3UTR TCA 90 bp | CCTGAAGCACTCTGGATAACACACAGATTTCCCATGACTTTGGGTCATAGGCACCATCTGCTGAGGAAATaGCAGCATCTGGAGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PEALWITHRFPMTLGHRHHLLRK*QHLEGG Trigger: ACCTCCCTCCAGATGCTGTCATTTCCTCAGCAGATG...GTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | CCTGAAGCACTCTGGATAACACACAGATTTCCCATGACTTTGGGTCATAGGCACTTCCTTCTGCTCCTGTaGCTGCTGAGTCAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PEALWITHRFPMTLGHRHFLLLL*LLSQSF Trigger: GAAGCTTTGACTCAGCAGTCACAGGAGCAGAAGGAA...GTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | CCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGAGGTCGCCTTGACAGCTTCCTaGCTCATCCTCTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGQLVVFTFGKSMETYEVALTAS*LILCCS Trigger: GGAGCAGCAGAGGATGAGTCAGGAAGCTGTCAAGGC...GACCTCATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | ATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCTTACCTATGCTCAGCGCCTCGTaGCCAGCCTTCCTCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: ILYQIQCHQVTRSCIGLPMLSAS*PAFLMS Trigger: AGACATGAGGAAGGCTGGGCACGAGGCGCTGAGCAT...AGGTAAGCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCGTGTTTCTCCATCAGTaGCTCCACATCCTTTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: EKNSFRVGRLDDRWICCVVFLHQ*LHILFN Trigger: ATTAAAAAGGATGTGGAGTCACTGATGGAGAAACAC...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | GTCACGTGTGGGGAAGTGGTCAGGTTAGTCAGAACAATGGCCATGCCAATGTGTAAGGATACAGCATCCTaGTCCTTTTCCTTCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VTCGEVVRLVRTMAMPMCKDTAS*SFSFKK Trigger: CTTCTTGAAGGAAAAGGAGCAGGATGCTGTATCCTT...ACACATTGGCATGGCCATTGTTCTGACTAACCTGACCACTTCCCCACACGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | CCTGAAGCACTCTGGATAACACACAGATTTCCCATGACTTTGGGTCATAGGCACTCGATGGCATCTAGCTaGTGCTTAACTGAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: PEALWITHRFPMTLGHRHSMASS*CLTEDC Trigger: GCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGA...GTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR CCA 90 bp | CCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGAGGTCGGAAATGACAGCATCTaGAGGGAGGTGGCCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PGQLVVFTFGKSMETYEVGNDSI*REVASG Trigger: TCCACTGGCCACCTCCCTCCAGATGCTGTCATTTCC...GACCTCATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | ATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCTTACCTCAGATGTGTGTGCGCTaGCTGCTGAATCTGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ILYQIQCHQVTRSCIGLPQMCVR*LLNLSL Trigger: AAGGCTCAGATTCAGCAGTCAGCGCACACACATCTG...AGGTAAGCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CAA 72 bp | GAAGCACTCTGGATAACACACAGATTTCCCATGACTTaGGGTCATAGGCACTCTTCCATCACTCCTCATGAT | + |
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Preference number: 4 (lower is better) Translates to: EALWITHRFPMT*GHRHSSITPHD Trigger: ATCATGAGGAGTGATGGAAGAGTGCCTATGACCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CAA 72 bp | TACTTAGAATCAAGTAAATGCATGGCTACACAGTGGTaGCTCCCTACACATCACCTTGAGGTGGTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLESSKCMATQW*LPTHHLEVVTR Trigger: CCTTGTGACCACCTCAAGGTGATGTGTAGGGAGCAACCACTGTGTAGCCATGCATTTACTTGATTCTAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR TCA 90 bp | AAGGTAATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCTCCCTTTCTTCGGCATaGACTTTCTCCAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KVILYQIQCHQVTRSCIGSLSSA*TFSRFS Trigger: GGAAAATCTGGAGAAAGTTCATGCCGAAGAAAGGGA...GCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGATTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| 3UTR CAA 72 bp | ACCAGATATTCAATTATGAAACATGATCTCAAGCCTTaGAAGAATGGCAGGAAGCAAGCCTGGGCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: TRYSIMKHDLKP*KNGRKQAWATH Trigger: ATGTGTGGCCCAGGCTTGCTTCCTGCCATTCTTCAAAGGCTTGAGATCATGTTTCATAATTGAATATCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS-3UTR GCA 90 bp | ATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCTTACCTTGCTTAACTGAAGACTaGAGAAGTGCCTTGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILYQIQCHQVTRSCIGLPCLTED*RSALYS Trigger: TGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCA...AGGTAAGCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR GCA 90 bp | TCTAAACCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGTCTCTTTGTTCCTCTaGATTTCCTCCTGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPGQLVVFTFGKSMETYVSLFL*ISSWRH Trigger: GTGCCTCCAGGAGGAAATGCAGAGGAACAAAGAGAC...ATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGGTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR GCA 90 bp | TCTAAACCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGCTTGGTTTCCTCCTTaGTCACCATCAAAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGQLVVFTFGKSMETYAWFPP*SPSKVS Trigger: AGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGC...ATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGGTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR GCA 90 bp | AAGGTAATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCGATGACATCTTTCATTaGTTCTTTCTCAAGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVILYQIQCHQVTRSCIGDDIFH*FFLKLH Trigger: GTGAAGCTTGAGAAAGAAGCAATGAAAGATGTCATC...GCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGATTACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 90 bp | GAGAGGAACAGCTCCAGGCTGGACAGGCTACGCTGGCGGGTGACTTaGTCGAGCCTTCTCTGCTCCCTCACGTATTCCACCAGCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERNSSRLDRLRWRVT*SSLLCSLTYSTSSS Trigger: GGACGAGCTGGTGGAATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTGTTCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 90 bp | CGCAGGAGAGGAACAGCTCCAGGCTGGACAGGCTACGCTGGCGGGTaGCTTGATCGAGCCTTCTCTGCTCCCTCACGTATTCCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRGTAPGWTGYAGG*LDRAFSAPSRIPPA Trigger: AGCTGGTGGAATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTGTTCCTCTCCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 90 bp | TCACTTCTCCTCTGCTCCTCTACGATTGCGGCCTTGACAGCTTCCTaGCTCATCCTCTGCTGCTCCTGCACAGCGGCCTGGATGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLCSSTIAALTAS*LILCCSCTAAWMAS Trigger: AGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGGATGAGTCAGGAAGCTGTCAAGGCCGCAATCGTAGAGGAGCAGAGGAGAAGTGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 90 bp | GGCTTCCTCCATGGCCTTTTCACTTCTCCTCTGCTCCTCTACGATTaGGGCCTTGACAGCTTCCTGACTCATCCTCTGCTGCTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GFLHGLFTSPLLLYD*GLDSFLTHPLLLLH Trigger: GTGCAGGAGCAGCAGAGGATGAGTCAGGAAGCTGTCAAGGCCGCAATCGTAGAGGAGCAGAGGAGAAGTGAAAAGGCCATGGAGGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 90 bp | GAAATGACAGCATCTGGAGGGAGGTGGCCAGTGGATGGAGATGAGTaGTCATGGTCCAGGATAAGCTCCGGAGAAGCTGGTGAGAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EMTASGGRWPVDGDE*SWSRISSGEAGESR Trigger: GCGACTCTCACCAGCTTCTCCGGAGCTTATCCTGGACCATGACCACTCATCTCCATCCACTGGCCACCTCCCTCCAGATGCTGTCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 90 bp | TGGACTCCAGGACCTTCAGGCTCATCCTCCAGGGCAAGTGCTCCATaGCTCGGCTCATCCGTTAAACCAAGTGGGAAGAGAGGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WTPGPSGSSSRASAP*LGSSVKPSGKRGMF Trigger: GAACATCCCTCTCTTCCCACTTGGTTTAACGGATGAGCCGAGCCATGGAGCACTTGCCCTGGAGGATGAGCCTGAAGGTCCTGGAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAACAGCTTCAGAGTGGGCAGGCTTGACGACCGATGGATCTGCTGTGTCAGCAGGAGACACAGCTaGGTTTCCTCCTTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: EKNSFRVGRLDDRWICCVSRRHS*VSSLLT Trigger: GGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCT...GACACAGCAGATCCATCGGTCGTCAAGCCTGCCCACTCTGAAGCTGTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 90 bp | GATGGTCTGACTCATGAGGCTGCTATCTGCATGCGTATCATCTGCTaGGGAAATGACAGCATCTGGAGGGAGGTGGCCAGTGGATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DGLTHEAAICMRIIC*GNDSIWREVASGWR Trigger: TCTCCATCCACTGGCCACCTCCCTCCAGATGCTGTCATTTCCTCAGCAGATGATACGCATGCAGATAGCAGCCTCATGAGTCAGACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGAGAGTCGCACTCCGGATACTTTATTCCACATTGGCATCAGTAGCTCTAGCAGGAGACACAGCTaGGTTTCCTCCTTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGESRTPDTLFHIGISSSSRRHS*VSSLLT Trigger: GGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCT...AGAGCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGACTCTCACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
||
| CDS-3UTR CAA 90 bp | GTCACGTGTGGGGAAGTGGTCAGGTTAGTCAGAACAATGGCCATGCCAATGTGTCCCTCTCCTGATCTCTaGCATGTTCTGTCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VTCGEVVRLVRTMAMPMCPSPDL*HVLSST Trigger: TGTGGAAGACAGAACATGCAAGAGATCAGGAGAGGG...ACACATTGGCATGGCCATTGTTCTGACTAACCTGACCACTTCCCCACACGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 90 bp | TCTTTCTCAAGCTTCACAGCAGACTCCAGTGTCTCTTTGTTCCTCTaGATTTCCTCCTGGAGGCACTTTTCCAGTGATTCCTTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSSFTADSSVSLFL*ISSWRHFSSDSFCS Trigger: GGAGCAGAAGGAATCACTGGAAAAGTGCCTCCAGGAGGAAATGCAGAGGAACAAAGAGACACTGGAGTCTGCTGTGAAGCTTGAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 90 bp | TCCTGGAGGCACTTTTCCAGTGATTCCTTCTGCTCCTGTGACTGCTaGGTCAAAGCTTCCTGGATTTTCTCTCTTAGCAGTTCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWRHFSSDSFCSCDC*VKASWIFSLSSSFS Trigger: TGAGAAGGAACTGCTAAGAGAGAAAATCCAGGAAGCTTTGACTCAGCAGTCACAGGAGCAGAAGGAATCACTGGAAAAGTGCCTCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 90 bp | ACATATTGCTTCTCGATGGCATCTAGCTGCTGCTTAACTGAAGACTaGAGAAGTGCCTTGTACTCATCCACTATAATGCTCAGCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TYCFSMASSCCLTED*RSALYSSTIMLSAS Trigger: CGAGGCGCTGAGCATTATAGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAATATGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 90 bp | TGCTTCTCGATTGCAGACACATATTGCTTCTCGATGGCATCTAGCTaGTGCTTAACTGAAGACTGCAGAAGTGCCTTGTACTCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CFSIADTYCFSMASS*CLTEDCRSALYSST Trigger: AGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAATATGTGTCTGCAATCGAGAAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 90 bp | TTCTCGATTGCAGACACATATTGCTTCTCGATGGCATCTAGCTGCTaGTTAACTGAAGACTGCAGAAGTGCCTTGTACTCATCCACTATA | + |
|
Preference number: 5 (lower is better) Translates to: FSIADTYCFSMASSC*LTEDCRSALYSSTI Trigger: TATAGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAATATGTGTCTGCAATCGAGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCAGCTAGTAGTGTTCACTTTTGGTAAATCTATGGAAACATATGAGGTCGACTGCAGAAGTGCCTaGTACTCATCCACTATAATG | + |
|
Preference number: 5 (lower is better) Translates to: PGQLVVFTFGKSMETYEVDCRSA*YSSTIM Trigger: CATTATAGTGGATGAGTACAAGGCACTTCTGCAGTC...GACCTCATATGTTTCCATAGATTTACCAAAAGTGAACACTACTAGCTGGCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 90 bp | TGTCTTCCAATTCTTGTTTATGTTTTTCCTGAAGCTCACGGTATCTaGCTTGAAAGGATACAGCATCCTGCTCCTTTTCCTTCAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVYVFPEAHGI*LERIQHPAPFPSRS Trigger: GCTTCTTGAAGGAAAAGGAGCAGGATGCTGTATCCTTTCAAGCCAGATACCGTGAGCTTCAGGAAAAACATAAACAAGAATTGGAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTACCAAATACAGTGCCATCAGGTTACCAGAAGCTGTATAGGCTTACCTTCTTCTTCAGAAGCTTaGAGTTTAGTCTCCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ILYQIQCHQVTRSCIGLPSSSEA*SLVSRL Trigger: AAGTCTGGAGACTAAACTCAAAGCTTCTGAAGAAGA...AGGTAAGCCTATACAGCTTCTGGTAACCTGATGGCACTGTATTTGGTAAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 90 bp | GGAGAGGAACAGCTCCAGGCTGGACAGGCTACGCTGGCGGGTGACTaGATCGAGCCTTCTCTGCTCCCTCACGTATTCCACCAGCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GEEQLQAGQATLAGD*IEPSLLPHVFHQLV Trigger: GACGAGCTGGTGGAATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTGTTCCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | AGCTCCAGGCTGGACAGGCTACGCTGGCGGGTGACTTaGTCGAGCCTTCTCTGCTCCCTCACGTATTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLDRLRWRVT*SSLLCSLTYST Trigger: GGTGGAATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 72 bp | CAGCTCCAGGCTGGACAGGCTACGCTGGCGGGTGACTaGATCGAGCCTTCTCTGCTCCCTCACGTATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLQAGQATLAGD*IEPSLLPHVFH Trigger: GTGGAATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | GGAACAGCTCCAGGCTGGACAGGCTACGCTGGCGGGTaGCTTGATCGAGCCTTCTCTGCTCCCTCACGTATT | + |
|
Preference number: 6 (lower is better) Translates to: GTAPGWTGYAGG*LDRAFSAPSRI Trigger: AATACGTGAGGGAGCAGAGAAGGCTCGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGCCTGGAGCTGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 72 bp | CCTCTGCTGCTCCTGCACAGCGGCCTGGATGGCCTCTaGCACCCTCTCCTGATCTCTTGCATGTTCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLLLHSGLDGL*HPLLISCMFCL Trigger: AAGACAGAACATGCAAGAGATCAGGAGAGGGTGGCAGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 72 bp | GCATCTGGAGGGAGGTGGCCAGTGGATGGAGATGAGTaGTCATGGTCCAGGATAAGCTCCGGAGAAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGGRWPVDGDE*SWSRISSGEAG Trigger: ACCAGCTTCTCCGGAGCTTATCCTGGACCATGACCACTCATCTCCATCCACTGGCCACCTCCCTCCAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 72 bp | GGACCTTCAGGCTCATCCTCCAGGGCAAGTGCTCCATaGCTCGGCTCATCCGTTAAACCAAGTGGGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPSGSSSRASAP*LGSSVKPSGKR Trigger: TCTCTTCCCACTTGGTTTAACGGATGAGCCGAGCCATGGAGCACTTGCCCTGGAGGATGAGCCTGAAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 72 bp | CCAGGGGACAGCAGGAGACACAGCTTGGTTTCCTCCTaGCTCACCATCAAAGGTCTCTGCAGCCTCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGDSRRHSLVSS*LTIKGLCSLKA Trigger: GGCTTTGAGGCTGCAGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCTGTCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032441.14 ENSMUST00000156106.2 |
||
| CDS CAA 72 bp | AGGAAAGGTGGCCCAGGGGACAGCAGGAGACACAGCTaGGTTTCCTCCTTGCTCACCATCAAAGGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RKGGPGDSRRHS*VSSLLTIKGLC Trigger: GCAGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCTGTCCCCTGGGCCACCTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032441.14 ENSMUST00000156106.2 |
||
| CDS CAA 90 bp | GGATACTGCAGGAAAGGTGGCCCAGGGGACAGCAGGAGACACAGCTaGGTTTCCTCCTTGCTCACCATCAAAGGTCTCTGCAGCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GYCRKGGPGDSRRHS*VSSLLTIKGLCSLK Trigger: TTTGAGGCTGCAGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCTGTCCCCTGGGCCACCTTTCCTGCAGTATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 90 bp | CCTGCACAGCGGCCTGGATGGCCTCTGCCACCCTCTCCTGATCTCTaGCATGTTCTGTCTTCCACAGTTCCCTTTCTTCGGCATGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PAQRPGWPLPPSPDL*HVLSSTVPFLRHEL Trigger: AAGTTCATGCCGAAGAAAGGGAACTGTGGAAGACAGAACATGCAAGAGATCAGGAGAGGGTGGCAGAGGCCATCCAGGCCGCTGTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 90 bp | TTACCCTGCAGGAAAGGTGGCCCAGGGGACAGCAGGAGACACAGCTaGGTTTCCTCCTTGCTCACCATCAAAGGTCTCTGCAGCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPCRKGGPGDSRRHS*VSSLLTIKGLCSLK Trigger: TTTGAGGCTGCAGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGCTGTGTCTCCTGCTGTCCCCTGGGCCACCTTTCCTGCAGGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156106.2 |
||
| CDS TCA 72 bp | GGCTGCTATCTGCATGCGTATCATCTGCTGAGGAAATaGCAGCATCTGGAGGGAGGTGGCCAGTGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCYLHAYHLLRK*QHLEGGGQWME Trigger: CTCCATCCACTGGCCACCTCCCTCCAGATGCTGTCATTTCCTCAGCAGATGATACGCATGCAGATAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | TTTCACTTCTCCTCTGCTCCTCTACGATTGCGGCCTTaGCAGCTTCCTGACTCATCCTCTGCTGCTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FHFSSAPLRLRP*QLPDSSSAAPA Trigger: TGCAGGAGCAGCAGAGGATGAGTCAGGAAGCTGTCAAGGCCGCAATCGTAGAGGAGCAGAGGAGAAGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CCA 72 bp | CCAGCTCGTCCCTCGTTCTCTTTACGGCTTCCTCCATaGCCTTTTCACTTCTCCTCTGCTCCTCTACGATTG | + |
|
Preference number: 6 (lower is better) Translates to: PARPSFSLRLPP*PFHFSSAPLRL Trigger: CAATCGTAGAGGAGCAGAGGAGAAGTGAAAAGGCCATGGAGGAAGCCGTAAAGAGAACGAGGGACGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | ACTCATGAGGCTGCTATCTGCATGCGTATCATCTGCTaGGGAAATGACAGCATCTGGAGGGAGGTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: THEAAICMRIIC*GNDSIWREVAS Trigger: ACTGGCCACCTCCCTCCAGATGCTGTCATTTCCTCAGCAGATGATACGCATGCAGATAGCAGCCTCATGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 90 bp | TCGATGGCATCTAGCTGCTGCTTAACTGAAGACTGCAGAAGTGCCTaGTACTCATCCACTATAATGCTCAGCGCCTCGTGCCCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMASSCCLTEDCRSA*YSSTIMLSASCPAF Trigger: GAAGGCTGGGCACGAGGCGCTGAGCATTATAGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | ACTGCTGAATCTGAGCCTTGGAGATGGTCTGACTCATaGGGCTGCTATCTGCATGCGTATCATCTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAESEPWRWSDS*GCYLHAYHLLR Trigger: CCTCAGCAGATGATACGCATGCAGATAGCAGCCTCATGAGTCAGACCATCTCCAAGGCTCAGATTCAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS TCA 72 bp | AAGTGGGAAGAGAGGGATGTTCAGATGTGTGTGCGCTaGCTGCTGAATCTGAGCCTTGGAGATGGTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: KWEERDVQMCVR*LLNLSLGDGLT Trigger: AGTCAGACCATCTCCAAGGCTCAGATTCAGCAGTCAGCGCACACACATCTGAACATCCCTCTCTTCCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 72 bp | AGCTTGGTTTCCTCCTTGCTCACCATCAAAGGTCTCTaGAGCCTCAAAGCCACCAAAGTCGTCATCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLVSSLLTIKGL*SLKATKVVIIH Trigger: ATGGATGATGACGACTTTGGTGGCTTTGAGGCTGCAGAGACCTTTGATGGTGAGCAAGGAGGAAACCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032441.14 ENSMUST00000156106.2 |
||
| CDS CCA 72 bp | GACTCCAGTGTCTCTTTGTTCCTCTGCATTTCCTCCTaGAGGCACTTTTCCAGTGATTCCTTCTGCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DSSVSLFLCISS*RHFSSDSFCSC Trigger: ACAGGAGCAGAAGGAATCACTGGAAAAGTGCCTCCAGGAGGAAATGCAGAGGAACAAAGAGACACTGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 72 bp | TCTAGCTGCTGCTTAACTGAAGACTGCAGAAGTGCCTaGTACTCATCCACTATAATGCTCAGCGCCTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCCLTEDCRSA*YSSTIMLSASC Trigger: GCACGAGGCGCTGAGCATTATAGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 72 bp | TCTTTCTCAAGCTTCACAGCAGACTCCAGTGTCTCTTaGTTCCTCTGCATTTCCTCCTGGAGGCACTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSSFTADSSVS*FLCISSWRHFS Trigger: GGAAAAGTGCCTCCAGGAGGAAATGCAGAGGAACAAAGAGACACTGGAGTCTGCTGTGAAGCTTGAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS CAA 90 bp | TTCATTGCTTCTTTCTCAAGCTTCACAGCAGACTCCAGTGTCTCTTaGTTCCTCTGCATTTCCTCCTGGAGGCACTTTTCCAGTGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: FIASFSSFTADSSVS*FLCISSWRHFSSDS Trigger: GGAATCACTGGAAAAGTGCCTCCAGGAGGAAATGCAGAGGAACAAAGAGACACTGGAGTCTGCTGTGAAGCTTGAGAAAGAAGCAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 72 bp | GCAGACACATATTGCTTCTCGATGGCATCTAGCTGCTaGTTAACTGAAGACTGCAGAAGTGCCTTGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ADTYCFSMASSC*LTEDCRSALYS Trigger: TGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAATATGTGTCTGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 72 bp | TTCTCGATGGCATCTAGCTGCTGCTTAACTGAAGACTaGAGAAGTGCCTTGTACTCATCCACTATAATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSMASSCCLTED*RSALYSSTIML Trigger: GAGCATTATAGTGGATGAGTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
||
| CDS GCA 72 bp | ATTGCAGACACATATTGCTTCTCGATGGCATCTAGCTaGTGCTTAACTGAAGACTGCAGAAGTGCCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: IADTYCFSMASS*CLTEDCRSALY Trigger: GTACAAGGCACTTCTGCAGTCTTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAATATGTGTCTGCAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS CCA 72 bp | ATTCTTGTTTATGTTTTTCCTGAAGCTCACGGTATCTaGCTTGAAAGGATACAGCATCCTGCTCCTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ILVYVFPEAHGI*LERIQHPAPFP Trigger: AGGAAAAGGAGCAGGATGCTGTATCCTTTCAAGCCAGATACCGTGAGCTTCAGGAAAAACATAAACAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS CAA 72 bp | TTGTTTATGTTTTTCCTGAAGCTCACGGTATCTGGCTaGAAAGGATACAGCATCCTGCTCCTTTTCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LFMFFLKLTVSG*KGYSILLLFLQ Trigger: TTGAAGGAAAAGGAGCAGGATGCTGTATCCTTTCAAGCCAGATACCGTGAGCTTCAGGAAAAACATAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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| CDS CAA 90 bp | TTCCAATTCTTGTTTATGTTTTTCCTGAAGCTCACGGTATCTGGCTaGAAAGGATACAGCATCCTGCTCCTTTTCCTTCAAGAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FQFLFMFFLKLTVSG*KGYSILLLFLQEAF Trigger: AAAGGCTTCTTGAAGGAAAAGGAGCAGGATGCTGTATCCTTTCAAGCCAGATACCGTGAGCTTCAGGAAAAACATAAACAAGAATTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032441.14 |
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