Pregenerated sensors for CCDC89 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044362Ensembl transcript IDs: ENSMUST00000061391.9
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAATCTTAAGAAACCTTTaGAGGTACAGCGGGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: HLFKLSIGRCLRLRMSELILRNL*RYSGEH Trigger: GTGTTCCCCGCTGTACCTTCAAAGGTTTCTTAAGAT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATACAGCGGGGAACACTaGTTAATCTTAAATGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HLFKLSIGRCLRLRMSELYSGEH*LILNVF Trigger: GAACACATTTAAGATTAACCAGTGTTCCCCGCTGTA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| 3UTR TCA 72 bp | TGTATCAGAGCTAGCTTTTACACTTTGGCACACAAGTaGATGATCAAACTTTTGCTTTGCCAAGCTAATACA | + |
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Preference number: 3 (lower is better) Translates to: CIRASFYTLAHK*MIKLLLCQANT Trigger: TGTATTAGCTTGGCAAAGCAAAAGTTTGATCATTCACTTGTGTGCCAAAGTGTAAAAGCTAGCTCTGATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCTCGCAGGACAGTCTaGAGCCTGGCCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSRRTV*SLACSS Trigger: GGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGCATGGTCACAGGCTTaGTGGTTCTGCAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELAWSQA*WFCRPS Trigger: GCTGGGCCTGCAGAACCAGCAAGCCTGTGACCATGC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGTCTGCAGCCTGGCCTaGAGCTCCTGGTTCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELVCSLA*SSWFRL Trigger: CAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGAC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTGATGCTCTGCAGCTaGCTGCGCAGCTCCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLMLCS*LRSSSV Trigger: GACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGCTGGTGTTGCTGTTTaGTGCTCTGCAGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELAGVAV*CSAAGC Trigger: GCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGCTGTTTGATGCTCTaGAGCTGGCTGCGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELCCLML*SWLRSS Trigger: GGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAACGGCCACTGCCTCTTaGTCAAAGCGTTCCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELTATAS*SKRSSA Trigger: TGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGGATCCCATCTACCCTaGGCTGAAGCTCGCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELGSHLP*AEAREL Trigger: GAGTTCGCGAGCTTCAGCGCAGGGTAGATGGGATCC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGGGATTGCTCTTGGATaGGGGAGCGAAGCATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELGIALG*GSEALP Trigger: AGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACAGATGAGCTGGGATTaGTCTTGGATGCGGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELQMSWD*SWMRER Trigger: TCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGTGGCCTGCTGGTGTTaGTGTTTGATGCTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELVACWC*CLMLCS Trigger: GCTGCAGAGCATCAAACAGCAACACCAGCAGGCCAC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGCAGTTCTAAGATCTaGCAGCGTTCCAGGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSSSKI*QRSRAS Trigger: CGAGGCCCTGGAACGCTGCCAGATCTTAGAACTGCT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCGGTCTCCTTGGCATaGTCACAGGCTTGCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSVSLA*SQACWF Trigger: GAACCAGCAAGCCTGTGACCATGCCAAGGAGACCGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACTGGCCTGCAGCTCCTaGTTCAGGTTGAGATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLACSS*FRLRLA Trigger: GGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAACTTCTCCATCTCCTaGAGCCTCTTCTCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELNFSIS*SLFSSS Trigger: GCTGGAGGAGAAGAGGCTGCAGGAGATGGAGAAGTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGGCTGTTGTTTTCCTaGCTCAGCCTCGCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELRLLFS*LSLAFS Trigger: GGAGAATGCGAGGCTGAGGCAGGAAAACAACAGCCT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACTCTCCATGGACAGCTaGAGCAGCTCCTCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLSMDS*SSSSFS Trigger: AGAGAAAGAGGAGCTGCTGCAGCTGTCCATGGAGAG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAAGCGTTCCAGCGCATaGTTCTTAGCCATGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELKRSSA*FLAMAA Trigger: AGCAGCCATGGCTAAGAAGCATGCGCTGGAACGCTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGCTATCAACGGCCACTaGCTCTTGCTCAAAGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELAINGH*LLLKAF Trigger: GAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGCTGGGATTGCTCTTaGATGCGGGAGCGAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSWDCS*MRERSI Trigger: AATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGGATGCAGATGAGCTaGGATTGCTCTTGGATGCGG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELRMQMS*DCSWMR Trigger: CCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGTACCTTAGCCTCCTaGTCTTTCAGAGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSTLAS*SFRAWL Trigger: CAGCCAGGCTCTGAAAGACCAGGAGGCTAAGGTACT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGTTCCGTGGCCTGCTaGTGTTGCTGTTTGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELCSVAC*CCCLML Trigger: GAGCATCAAACAGCAACACCAGCAGGCCACGGAACA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTCCCATCTGTTCCGTaGCCTGCTGGTGTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELFPSVP*PAGVAV Trigger: AACAGCAACACCAGCAGGCCACGGAACAGATGGGAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGTTTCAGGATGCAGATaGGCTGGGATTGCTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELVSGCR*AGIALG Trigger: TCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAAC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACTTTCAGAGCCTGGCTaGAGAGGCTGTTGTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLSEPG*RGCCFP Trigger: AGGAAAACAACAGCCTCTTCAGCCAGGCTCTGAAAG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCCAGCTTTTGGATGTaGTCACTCTGGGCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSSFWM*SLWAFN Trigger: GTTGAAGGCCCAGAGTGAGCACATCCAAAAGCTGGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGTTCTGAAGCACCTTaGCTCTCTCCATGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELCSEAP*LSPWTA Trigger: AGCTGTCCATGGAGAGAGGCAAGGTGCTTCAGAACA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACGAATCATCTGCTCGTaGTTGGATGCCAGGATCATG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELRIICS*LDARIM Trigger: CATGATCCTGGCATCCAACCACGAGCAGATGATTCG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAACTTCTCCTCAAGCTaGCGGATCTCAGCCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELNFSSS*RISACL Trigger: CAAACAGGCTGAGATCCGCCAGCTTGAGGAGAAGTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGCCAGGATCATGAAGTaGTTCTCCAGCTTTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELARIMK*FSSFWM Trigger: CATCCAAAAGCTGGAGAATCACTTCATGATCCTGGC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCTCCTCTTTCAGCTTaGCGTTTTCACTCTTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSPLSA*RFHSCA Trigger: CGCACAAGAGTGAAAACGTCAAGCTGAAAGAGGAGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGGTCTTTCAGAGCCTaGCTGAAGAGGCTGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELWSFRA*LKRLLF Trigger: AAACAACAGCCTCTTCAGCCAGGCTCTGAAAGACCA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR TCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGGATGCCAGGATCATaGAGTGATTCTCCAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELWMPGS*SDSPAF Trigger: AAAAGCTGGAGAATCACTTCATGATCCTGGCATCCA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAACGTTTTCACTCTTGTaGGCATCCTTGAAGCGAATC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELTFSLL*ASLKRI Trigger: GATTCGCTTCAAGGATGCGCACAAGAGTGAAAACGT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTGAGATTAGCCTCTTaGTCCTTTCCCATCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLRLAS*SFPICS Trigger: GGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR GCA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAAGAGATCCAGGCTGTaGTTTTTGAAGGCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HLFKLSIGRCLRLRMSELKRSRL*FLKASD Trigger: ATCAGAAGCCTTCAAAAAGCACAGCCTGGATCTCTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| 3UTR CAA 72 bp | TATGAGGTAGAAGATACGGATAATCTTAAGAAACCTTaGAAGGTACAGCGGGGAACACTGGTTAATCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: YEVEDTDNLKKP*KVQRGTLVNLK Trigger: TTTAAGATTAACCAGTGTTCCCCGCTGTACCTTCAAAGGTTTCTTAAGATTATCCGTATCTTCTACCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | CGTTCCAGGGCCTCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTaGGATTGCTCTTGGATGCGGGAGCGAAGCATTGCCTTCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: RSRASSDLRFRMQMS*DCSWMRERSIAFSP Trigger: GGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGCCCTGGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | ATCTGTTCCGTGGCCTGCTGGTGTTGCTGTTTGATGCTCTGCAGCTaGCTGCGCAGCTCCTCGGTCTCCTTGGCATGGTCACAGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: ICSVACWCCCLMLCS*LRSSSVSLAWSQAC Trigger: GCAAGCCTGTGACCATGCCAAGGAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS TCA 90 bp | GGCAGCGTTCCAGGGCCTCGTCGGATCTGCGTTTCAGGATGCAGATaGGCTGGGATTGCTCTTGGATGCGGGAGCGAAGCATTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GSVPGPRRICVSGCR*AGIALGCGSEALPS Trigger: AGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGCCCTGGAACGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | AGGGCCTCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATTaGTCTTGGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RASSDLRFRMQMSWD*SWMRERSIAFSPFS Trigger: GGAGAAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGTTaGTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTCCTCGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LASCSFPICSVACWC*CLMLCSWLRSSSVS Trigger: GGAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TGCAGCAGCTCCTCTTTCTCTCGCAGGACAGTCTGCAGCCTGGCCTaGAGCTCCTGGTTCAGGTTGAGATTAGCCTCTTGCTCCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: CSSSSFSRRTVCSLA*SSWFRLRLASCSFP Trigger: GGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGAGAAAGAGGAGCTGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TCCATGGACAGCTGCAGCAGCTCCTCTTTCTCTCGCAGGACAGTCTaGAGCCTGGCCTGCAGCTCCTGGTTCAGGTTGAGATTAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMDSCSSSSFSRRTV*SLACSSWFRLRLAS Trigger: AGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGAGAAAGAGGAGCTGCTGCAGCTGTCCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | CCTGCGCTGAAGCTCGCGAACTCTCAGGTTGCTATCAACGGCCACTaGCTCTTGCTCAAAGCGTTCCAGCGCATGCTTCTTAGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PALKLANSQVAINGH*LLLKAFQRMLLSHG Trigger: GCCATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGCGAGCTTCAGCGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | AGGTTGAGATTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTaGTGGTGTTGCTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLRLASCSFPICSVA*WCCCLMLCSWLRSS Trigger: GGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TGCAGCCTGGCCTGCAGCTCCTGGTTCAGGTTGAGATTAGCCTCTTaGTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGTTGCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLACSSWFRLRLAS*SFPICSVACWCCCL Trigger: CAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TCTGGATCCCATCTACCCTGCGCTGAAGCTCGCGAACTCTCAGGTTaGTATCAACGGCCACTGCCTCTTGCTCAAAGCGTTCCAGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSHLPCAEARELSG*YQRPLPLAQSVPAH Trigger: ATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGCGAGCTTCAGCGCAGGGTAGATGGGATCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | TCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATTGCTCTTaGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTTCTCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSDLRFRMQMSWDCS*MRERSIAFSPFSSS Trigger: TGAGGAGGAGAAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | TTGAGATTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTGCTaGTGTTGCTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLASCSFPICSVAC*CCCLMLCSWLRSSS Trigger: CGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | TCCTCTTTCTCTCGCAGGACAGTCTGCAGCCTGGCCTGCAGCTCCTaGTTCAGGTTGAGATTAGCCTCTTGCTCCTTTCCCATCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSRRTVCSLACSS*FRLRLASCSFPICS Trigger: GGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGAGAAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TGCCTCTTGCTCAAAGCGTTCCAGCGCATGCTTCTTAGCCATGGCTaGTGTCTCCAACTTCTCCTCAAGCTGGCGGATCTCAGCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLLKAFQRMLLSHG*CLQLLLKLADLSLF Trigger: AAACAGGCTGAGATCCGCCAGCTTGAGGAGAAGTTGGAGACAGCAGCCATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | TTGCTATCAACGGCCACTGCCTCTTGCTCAAAGCGTTCCAGCGCATaGTTCTTAGCCATGGCTGCTGTCTCCAACTTCTCCTCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSTATASCSKRSSA*FLAMAAVSNFSSSW Trigger: CCAGCTTGAGGAGAAGTTGGAGACAGCAGCCATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 90 bp | ACCAGGGCCTTGTTGAGTGTAGTGAGCTCCAGTACCTTAGCCTCCTaGTCTTTCAGAGCCTGGCTGAAGAGGCTGTTGTTTTCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRALLSVVSSSTLAS*SFRAWLKRLLFSCL Trigger: GAGGCAGGAAAACAACAGCCTCTTCAGCCAGGCTCTGAAAGACCAGGAGGCTAAGGTACTGGAGCTCACTACACTCAACAAGGCCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | GCCTCCTGGTCTTTCAGAGCCTGGCTGAAGAGGCTGTTGTTTTCCTaGCTCAGCCTCGCATTCTCCTCTTTCAGCTTGACGTTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ASWSFRAWLKRLLFS*LSLAFSSFSLTFSL Trigger: GAGTGAAAACGTCAAGCTGAAAGAGGAGAATGCGAGGCTGAGGCAGGAAAACAACAGCCTCTTCAGCCAGGCTCTGAAAGACCAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 90 bp | ACTCTTGTGCGCATCCTTGAAGCGAATCATCTGCTCGTGGTTGGATaGCAGGATCATGAAGTGATTCTCCAGCTTTTGGATGTGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TLVRILEANHLLVVG*QDHEVILQLLDVLT Trigger: AGTGAGCACATCCAAAAGCTGGAGAATCACTTCATGATCCTGGCATCCAACCACGAGCAGATGATTCGCTTCAAGGATGCGCACAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGGCATGGTCACAGGCTaGCTGGTTCTGCAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELGMVTG*LVLQAQ Trigger: CTGGGCCTGCAGAACCAGCAAGCCTGTGACCATGCC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGCGGGAGCGAAGCATaGCCTTCTCGCCCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELCGSEA*PSRPSP Trigger: AGGAGAAGGGCGAGAAGGCAATGCTTCGCTCCCGCA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAACGGCCACTGCCTCTaGCTCAAAGCGTTCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELNGHCL*LKAFQR Trigger: GCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGAGCTGGGATTGCTCTaGGATGCGGGAGCGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELELGLL*DAGAKH Trigger: ATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCCTCCACCAGGGCCTaGTTGAGTGTAGTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSSTRA*LSVVSS Trigger: GGAGCTCACTACACTCAACAAGGCCCTGGTGGAGGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTACGTGGCCTGCTGGTGTaGCTGTTTGATGCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELRGLLV*LFDALQ Trigger: CTGCAGAGCATCAAACAGCAACACCAGCAGGCCACG...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATGGCTGAAGAGGCTGTaGTTTTCCTGCCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELWLKRL*FSCLSL Trigger: GAGGCTGAGGCAGGAAAACAACAGCCTCTTCAGCCA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCCACCAGGGCCTTGTaGAGTGTAGTGAGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSTRAL*SVVSSS Trigger: ACTGGAGCTCACTACACTCAACAAGGCCCTGGTGGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGACAGTCCCCTAAGGTaGGCCAAAGCTTCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELDSPLR*AKASLR Trigger: TCTGAGAGAAGCTTTGGCCAACCTTAGGGGACTGTC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCCTCCAGCTCCGAGTaGAGCAGTTCTAAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSSSSE*SSSKIW Trigger: CCAGATCTTAGAACTGCTCAACTCGGAGCTGGAGGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGTGATTCTCCAGCTTTaGGATGTGCTCACTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELVILQL*DVLTLG Trigger: GCCCAGAGTGAGCACATCCAAAAGCTGGAGAATCAC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAGCTCCTGGTTCAGGTaGAGATTAGCCTCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSSWFR*RLASCS Trigger: GGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTGACGTTTTCACTCTaGTGCGCATCCTTGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLTFSL*CASLKR Trigger: TCGCTTCAAGGATGCGCACAAGAGTGAAAACGTCAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAGTTGAGATTAGCCTCTaGCTCCTTTCCCATCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELVEISL*LLSHLF Trigger: GAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAAC...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATCCAGGCTGTGCTTTTaGAAGGCTTCTGATTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELSRLCF*KASDCR Trigger: TCTGCAATCAGAAGCCTTCAAAAAGCACAGCCTGGA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTAAAGAGATGGCGGAGTTaGGCATTAAGCTCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELKRWRS*ALSSLS Trigger: AGAGAGAGAGCTTAATGCCAAACTCCGCCATCTCTT...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTAAGCTCTCTCTCTTaGCTTAAGAGATCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELLSSLS*LKRSRL Trigger: CAGCCTGGATCTCTTAAGCAAAGAGAGAGAGCTTAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS-3UTR CAA 90 bp | CATCTTTTCAAGCTATCTATAGGAAGATGTCTGAGGCTGAGAATGAGTGAGTTATTCCTCATCCTGGTTTaGCAGGTTTTCGTTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLFKLSIGRCLRLRMSELFLILV*QVFVLF Trigger: AAACAAAACGAAAACCTGCAAAACCAGGATGAGGAA...TAACTCACTCATTCTCAGCCTCAGACATCTTCCTATAGATAGCTTGAAAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | ATGCTCTGCAGCTGGCTGCGCAGCTCCTCGGTCTCCTaGGCATGGTCACAGGCTTGCTGGTTCTGCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLCSWLRSSSVS*AWSQACWFCRP Trigger: GGGCCTGCAGAACCAGCAAGCCTGTGACCATGCCAAGGAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | TGCTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTCCTCGGTCTCCTaGGCATGGTCACAGGCTTGCTGGTTCTGCAGGCCCAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCLMLCSWLRSSSVS*AWSQACWFCRPSSS Trigger: GGAGCTGCTGGGCCTGCAGAACCAGCAAGCCTGTGACCATGCCAAGGAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | GTGGCCTGCTGGTGTTGCTGTTTGATGCTCTGCAGCTaGCTGCGCAGCTCCTCGGTCTCCTTGGCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VACWCCCLMLCS*LRSSSVSLAWS Trigger: TGACCATGCCAAGGAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS TCA 72 bp | CCAGGGCCTCGTCGGATCTGCGTTTCAGGATGCAGATaGGCTGGGATTGCTCTTGGATGCGGGAGCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPRRICVSGCR*AGIALGCGSEA Trigger: TGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS TCA 72 bp | TTCCCATCTGTTCCGTGGCCTGCTGGTGTTGCTGTTTaGTGCTCTGCAGCTGGCTGCGCAGCTCCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPSVPWPAGVAV*CSAAGCAAPRS Trigger: AGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | AGCTGCAGCAGCTCCTCTTTCTCTCGCAGGACAGTCTaGAGCCTGGCCTGCAGCTCCTGGTTCAGGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSSSSFSRRTV*SLACSSWFRLR Trigger: TCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGAGAAAGAGGAGCTGCTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | GCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTGCTaGTGTTGCTGTTTGATGCTCTGCAGCTGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASCSFPICSVAC*CCCLMLCSWLR Trigger: GCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | CAGGGCCTCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATaGCTCTTGGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLVGSAFQDADELG*LLDAGAKHCLLALL Trigger: GAGAAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | TCTCGCAGGACAGTCTGCAGCCTGGCCTGCAGCTCCTGGTTCAGGTaGAGATTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRTVCSLACSSWFR*RLASCSFPICSVAC Trigger: GCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAGACTGTCCTGCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CAA 90 bp | CTCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATTGCTCTaGGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTTCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVGSAFQDADELGLL*DAGAKHCLLALLLL Trigger: GAGGAGGAGAAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CAA 90 bp | ATTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGTaGCTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTCCTCGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLLLLSHLFRGLLV*LFDALQLAAQLLGL Trigger: GAGACCGAGGAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CCA 72 bp | GCCTCGTCGGATCTGCGTTTCAGGATGCAGATGAGCTaGGATTGCTCTTGGATGCGGGAGCGAAGCATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSDLRFRMQMS*DCSWMRERSIA Trigger: GGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGACGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CAA 72 bp | TTGCTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGTaGCTGTTTGATGCTCTGCAGCTGGCTGCGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSHLFRGLLV*LFDALQLAAQL Trigger: GAGCTGCGCAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CAA 72 bp | GGCCTGCAGCTCCTGGTTCAGGTTGAGATTAGCCTCTaGCTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLQLLVQVEISL*LLSHLFRGLLV Trigger: CACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS CAA 90 bp | CTGCAGCCTGGCCTGCAGCTCCTGGTTCAGGTTGAGATTAGCCTCTaGCTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGTTGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQPGLQLLVQVEISL*LLSHLFRGLLVLLF Trigger: AAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGCCAGGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
||
| CDS GCA 72 bp | GCCTGCAGCTCCTGGTTCAGGTTGAGATTAGCCTCTTaGTCCTTTCCCATCTGTTCCGTGGCCTGCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACSSWFRLRLAS*SFPICSVACWC Trigger: ACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAATCTCAACCTGAACCAGGAGCTGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | GCTGGCGGATCTCAGCCTGTTTGTTCTGAAGCACCTTaGCTCTCTCCATGGACAGCTGCAGCAGCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AGGSQPVCSEAP*LSPWTAAAAPL Trigger: AAGAGGAGCTGCTGCAGCTGTCCATGGAGAGAGGCAAGGTGCTTCAGAACAAACAGGCTGAGATCCGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | CTGCGTTTCAGGATGCAGATGAGCTGGGATTGCTCTTaGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LRFRMQMSWDCS*MRERSIAFSPF Trigger: GAAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | TTCTCCTCCAGCTCCGAGTTGAGCAGTTCTAAGATCTaGCAGCGTTCCAGGGCCTCGTCGGATCTGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSSSELSSSKI*QRSRASSDLRF Trigger: GAAACGCAGATCCGACGAGGCCCTGGAACGCTGCCAGATCTTAGAACTGCTCAACTCGGAGCTGGAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | CTGAAGCTCGCGAACTCTCAGGTTGCTATCAACGGCCACTGCCTCTaGCTCAAAGCGTTCCAGCGCATGCTTCTTAGCCATGGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LKLANSQVAINGHCL*LKAFQRMLLSHGCC Trigger: ACAGCAGCCATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGCGAGCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | TCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATTaGTCTTGGATGCGGGAGCGAAGCATTGCCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SDLRFRMQMSWD*SWMRERSIAFS Trigger: CGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | TTAGCCTCTTGCTCCTTTCCCATCTGTTCCGTGGCCTaGTGGTGTTGCTGTTTGATGCTCTGCAGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LASCSFPICSVA*WCCCLMLCSWL Trigger: CAGCCAGCTGCAGAGCATCAAACAGCAACACCAGCAGGCCACGGAACAGATGGGAAAGGAGCAAGAGGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | CTCAAAGCGTTCCAGCGCATGCTTCTTAGCCATGGCTaGTGTCTCCAACTTCTCCTCAAGCTGGCGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LKAFQRMLLSHG*CLQLLLKLADL Trigger: GAGATCCGCCAGCTTGAGGAGAAGTTGGAGACAGCAGCCATGGCTAAGAAGCATGCGCTGGAACGCTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | CATCTACCCTGCGCTGAAGCTCGCGAACTCTCAGGTTaGTATCAACGGCCACTGCCTCTTGCTCAAAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HLPCAEARELSG*YQRPLPLAQSV Trigger: AACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGCGAGCTTCAGCGCAGGGTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | AGCTCCAGTACCTTAGCCTCCTGGTCTTTCAGAGCCTaGCTGAAGAGGCTGTTGTTTTCCTGCCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSTLASWSFRA*LKRLLFSCLSL Trigger: GAGGCTGAGGCAGGAAAACAACAGCCTCTTCAGCCAGGCTCTGAAAGACCAGGAGGCTAAGGTACTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | TCTGCGTTTCAGGATGCAGATGAGCTGGGATTGCTCTaGGATGCGGGAGCGAAGCATTGCCTTCTCGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SAFQDADELGLL*DAGAKHCLLAL Trigger: AAGGGCGAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | GTCGGATCTGCGTTTCAGGATGCAGATGAGCTGGGATaGCTCTTGGATGCGGGAGCGAAGCATTGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VGSAFQDADELG*LLDAGAKHCLL Trigger: GAGAAGGCAATGCTTCGCTCCCGCATCCAAGAGCAATCCCAGCTCATCTGCATCCTGAAACGCAGATCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | CGAACTCTCAGGTTGCTATCAACGGCCACTGCCTCTTaGTCAAAGCGTTCCAGCGCATGCTTCTTAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RTLRLLSTATAS*SKRSSACFLAM Trigger: CATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | AAGCTCGCGAACTCTCAGGTTGCTATCAACGGCCACTaGCTCTTGCTCAAAGCGTTCCAGCGCATGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KLANSQVAINGH*LLLKAFQRMLL Trigger: AAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGCGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | CTCTGTTTCAAGACCTCCAGTTCCTCCACCAGGGCCTaGTTGAGTGTAGTGAGCTCCAGTACCTTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LCFKTSSSSTRA*LSVVSSSTLAS Trigger: GGAGGCTAAGGTACTGGAGCTCACTACACTCAACAAGGCCCTGGTGGAGGAACTGGAGGTCTTGAAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | GCGAACTCTCAGGTTGCTATCAACGGCCACTGCCTCTaGCTCAAAGCGTTCCAGCGCATGCTTCTTAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ANSQVAINGHCL*LKAFQRMLLSH Trigger: ATGGCTAAGAAGCATGCGCTGGAACGCTTTGAGCAAGAGGCAGTGGCCGTTGATAGCAACCTGAGAGTTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | GCGCATCTCTGTTTCAAGACCTCCAGTTCCTCCACCAGGGCCTTGTaGAGTGTAGTGAGCTCCAGTACCTTAGCCTCCTGGTCTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AHLCFKTSSSSTRAL*SVVSSSTLASWSFR Trigger: TCTGAAAGACCAGGAGGCTAAGGTACTGGAGCTCACTACACTCAACAAGGCCCTGGTGGAGGAACTGGAGGTCTTGAAACAGAGATGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | CTGCTCGTGGTTGGATGCCAGGATCATGAAGTGATTCTCCAGCTTTaGGATGTGCTCACTCTGGGCCTTCAACTTCTCCATCTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLVVGCQDHEVILQL*DVLTLGLQLLHLLQ Trigger: CTGCAGGAGATGGAGAAGTTGAAGGCCCAGAGTGAGCACATCCAAAAGCTGGAGAATCACTTCATGATCCTGGCATCCAACCACGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS TCA 72 bp | ATCATCTGCTCGTGGTTGGATGCCAGGATCATGAAGTaGTTCTCCAGCTTTTGGATGTGCTCACTCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: IICSWLDARIMK*FSSFWMCSLWA Trigger: GGCCCAGAGTGAGCACATCCAAAAGCTGGAGAATCACTTCATGATCCTGGCATCCAACCACGAGCAGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CCA 72 bp | TTGTTGAGTGTAGTGAGCTCCAGTACCTTAGCCTCCTaGTCTTTCAGAGCCTGGCTGAAGAGGCTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LLSVVSSSTLAS*SFRAWLKRLLF Trigger: AAACAACAGCCTCTTCAGCCAGGCTCTGAAAGACCAGGAGGCTAAGGTACTGGAGCTCACTACACTCAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | TCTTTCAGCTTGACGTTTTCACTCTTGTGCGCATCCTaGAAGCGAATCATCTGCTCGTGGTTGGATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFSLTFSLLCAS*KRIICSWLDAR Trigger: CCTGGCATCCAACCACGAGCAGATGATTCGCTTCAAGGATGCGCACAAGAGTGAAAACGTCAAGCTGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | CTCGCATTCTCCTCTTTCAGCTTGACGTTTTCACTCTaGTGCGCATCCTTGAAGCGAATCATCTGCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LAFSSFSLTFSL*CASLKRIICSW Trigger: CCACGAGCAGATGATTCGCTTCAAGGATGCGCACAAGAGTGAAAACGTCAAGCTGAAAGAGGAGAATGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 90 bp | GCATTCTCCTCTTTCAGCTTGACGTTTTCACTCTTGTGCGCATCCTaGAAGCGAATCATCTGCTCGTGGTTGGATGCCAGGATCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: AFSSFSLTFSLLCAS*KRIICSWLDARIMK Trigger: CTTCATGATCCTGGCATCCAACCACGAGCAGATGATTCGCTTCAAGGATGCGCACAAGAGTGAAAACGTCAAGCTGAAAGAGGAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS GCA 72 bp | GCATTCTCCTCTTTCAGCTTGACGTTTTCACTCTTGTaGGCATCCTTGAAGCGAATCATCTGCTCGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AFSSFSLTFSLL*ASLKRIICSWL Trigger: CAACCACGAGCAGATGATTCGCTTCAAGGATGCGCACAAGAGTGAAAACGTCAAGCTGAAAGAGGAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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| CDS CAA 72 bp | GTTGGATGCCAGGATCATGAAGTGATTCTCCAGCTTTaGGATGTGCTCACTCTGGGCCTTCAACTTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VGCQDHEVILQL*DVLTLGLQLLH Trigger: ATGGAGAAGTTGAAGGCCCAGAGTGAGCACATCCAAAAGCTGGAGAATCACTTCATGATCCTGGCATCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061391.9 |
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