Pregenerated sensors for CCDC88A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032740Ensembl transcript IDs: ENSMUST00000040182.13, ENSMUST00000109477.2, ENSMUST00000123561.8, ENSMUST00000140194.2, ENSMUST00000155854.8, ENSMUST00000239407.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCTGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTaGACCAAAACATTTCCATGGCCAGCTAGGAGGCATGTTATTAGA | + |
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Preference number: 1 (lower is better) Translates to: NLSRELFGNHQLRKP*TKTFPWPARRHVIR Trigger: TCTAATAACATGCCTCCTAGCTGGCCATGGAAATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 90 bp | TCAGGGTTGGCCTACTCCAAGTTAATACATTACAGTATTTCTAGCTaGTGTGCTGATTACCTCAGCAGGTTCAAACTGCTTTACCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SGLAYSKLIHYSISS*CADYLSRFKLLYPH Trigger: ATGAGGGTAAAGCAGTTTGAACCTGCTGAGGTAATCAGCACATCAGCTAGAAATACTGTAATGTATTAACTTGGAGTAGGCCAACCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 90 bp | TTTTATCACTCTTGTATTTCATTATGGAAATTACTGCATATCTTATaGGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: FYHSCISLWKLLHIL*AALPLQCIQTIGSR Trigger: TCTAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCAGTAATTTCCATAATGAAATACAAGAGTGATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR CAA 90 bp | AAGAAAAAGAAAGTGACTATAAAAACCATCTCAAACAATGGTATCTaGTCGTGCATGGACTCCTGTGACAGACATCAGGTGCCACCGAGG | + |
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Preference number: 2 (lower is better) Translates to: KKKKVTIKTISNNGI*SCMDSCDRHQVPPR Trigger: CCTCGGTGGCACCTGATGTCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTATAGTCACTTTCTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR CAA 90 bp | CGTGCATGGACTCCTGTGACAGACATCAGGTGCCACCGAGGAAAGTaGTTTTGTTATTCAACTCTACCTCCCTTATTAGCATTAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: RAWTPVTDIRCHRGK*FCYSTLPPLLALIL Trigger: TAAAATTAATGCTAATAAGGGAGGTAGAGTTGAATAACAAAACAACTTTCCTCGGTGGCACCTGATGTCTGTCACAGGAGTCCATGCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTTCACACTGAGAAACTaGAGGACACTTTTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: CLVNSLVTTNSENLEPKHFTLRN*RTLFSP Trigger: GGGAGAGAAAAGTGTCCTTCAGTTTCTCAGTGTGAA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGCACTTCCTTTGCAGTaGATCCAAACAATTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: IKTISNNGILSCMDSCDRALPLQ*IQTIGS Trigger: AGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGAGCTGCACTTCCTTTaGAGTGCATCCAAACAATTG | + |
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Preference number: 2 (lower is better) Translates to: IKTISNNGILSCMDSCDRELHFL*SASKQL Trigger: CAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATaGGCTCTAGAAACAAAAACAATAACCAGCGTACCAACACATGCA | + |
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Preference number: 2 (lower is better) Translates to: CISYELHFLCSASKQ*ALETKTITSVPTHA Trigger: TGCATGTGTTGGTACGCTGGTTATTGTTTTTGTTTCTAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATACAGTATTTCTAGCTaGTGTGCTGATTACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: IKTISNNGILSCMDSCDRYSISS*CADYLS Trigger: GCTGAGGTAATCAGCACATCAGCTAGAAATACTGTA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGACAGCGTACCAACACATaGACTCTGCTAATGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IKTISNNGILSCMDSCDRQRTNT*TLLMKE Trigger: TTCTTTCATTAGCAGAGTGCATGTGTTGGTACGCTG...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGCATATCTTATGAGCTaGACTTCCTTTGCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CLVNSLVTTNSENLEPKHAYLMS*TSFAVH Trigger: ATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGTCTCTAGACTTCCATaGTACCCATTTACCAATTTG | + |
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Preference number: 2 (lower is better) Translates to: CLVNSLVTTNSENLEPKHVSRLP*YPFTNL Trigger: CAAATTGGTAAATGGGTATCATGGAAGTCTAGAGAC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGGTCTTTCCAATGGTTaGTATAAACACAACCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: CLVNSLVTTNSENLEPKHGLSNG*YKHNLL Trigger: TAGCAGGTTGTGTTTATAGCAACCATTGGAAAGACC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGACATTATGGAAATTACTaGATATCTTATGAGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: IKTISNNGILSCMDSCDRHYGNY*ISYELH Trigger: GTGCAGCTCATAAGATATGCAGTAATTTCCATAATG...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCATAAAGTCTTCACACTaGGAAACTGAAGGACACTTT | + |
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Preference number: 2 (lower is better) Translates to: KRLTCQNNFLCILIYSTFIKSSH*ETEGHF Trigger: AAAGTGTCCTTCAGTTTCTCAGTGTGAAGACTTTAT...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 72 bp | CTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTaGCAGACATCAGGTGCCACCGAGGAAAGTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LKQWYLVVHGLL*QTSGATEESCF Trigger: AAAACAACTTTCCTCGGTGGCACCTGATGTCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR GCA 72 bp | TCTTGTCGTGCATGGACTCCTGTGACAGACATCAGGTaGCACCGAGGAAAGTTGTTTTGTTATTCAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SCRAWTPVTDIR*HRGKLFCYSTL Trigger: TAGAGTTGAATAACAAAACAACTTTCCTCGGTGGCACCTGATGTCTGTCACAGGAGTCCATGCACGACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR GCA 72 bp | ACTATAAAAACCATCTCAAACAATGGTATCTTGTCGTaGATGGACTCCTGTGACAGACATCAGGTGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: TIKTISNNGILS*MDSCDRHQVPP Trigger: CGGTGGCACCTGATGTCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTATAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 72 bp | CCTAGGGCTAGGGTTATAGTGAATGTTTGGTGTAGGTaGGGTCCTAGAATCAAGTTCCACGAATGGCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: PRARVIVNVWCR*GPRIKFHEWQN Trigger: ATTTTGCCATTCGTGGAACTTGATTCTAGGACCTCACCTACACCAAACATTCACTATAACCCTAGCCCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGTTCCTTAGAATACTaGACCTTAAACACTCGGTCC | + |
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Preference number: 3 (lower is better) Translates to: CLVNSLVTTNSENLEPKHCSLEY*TLNTRS Trigger: GGACCGAGTGTTTAAGGTCAAGTATTCTAAGGAACA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAACCTTCTAAAACTTTaGGCAGCTGAATCCAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: CLVNSLVTTNSENLEPKHNLLKL*AAESSS Trigger: ACTACTGGATTCAGCTGCCAAAAGTTTTAGAAGGTT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGACCAACTCAGAAAACCTaGAACCAAAACATTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: IKTISNNGILSCMDSCDRPTQKT*NQNISM Trigger: CATGGAAATGTTTTGGTTCAAGGTTTTCTGAGTTGG...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 72 bp | GCCTACTCCAAGTTAATACATTACAGTATTTCTAGCTaGTGTGCTGATTACCTCAGCAGGTTCAAACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: AYSKLIHYSISS*CADYLSRFKLL Trigger: AAGCAGTTTGAACCTGCTGAGGTAATCAGCACATCAGCTAGAAATACTGTAATGTATTAACTTGGAGTAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAGTGCATCCAAACAATaGGCTCTAGAAACAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: CLVNSLVTTNSENLEPKHSASKQ*ALETKT Trigger: TGTTTTTGTTTCTAGAGCCAATTGTTTGGATGCACT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTCTTGTAAATGCTATTaGCTGGAAAACCATCTCACT | + |
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Preference number: 3 (lower is better) Translates to: CLVNSLVTTNSENLEPKHSCKCY*LENHLT Trigger: AGTGAGATGGTTTTCCAGCAAATAGCATTTACAAGA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 72 bp | AGTGTTAAGACAGTTCAGGCTGTAGTAATCCATTTGTaGGGTGGTTACAATTCTGTAATGTGCACAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: SVKTVQAVVIHL*GGYNSVMCTVI Trigger: AATCACTGTGCACATTACAGAATTGTAACCACCTCACAAATGGATTACTACAGCCTGAACTGTCTTAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR TCA 72 bp | CTGTCTCTAGACTTCCATGATACCCATTTACCAATTTaGGACTTGAATCTAAGGAGTCACAAAGAAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: LSLDFHDTHLPI*DLNLRSHKEDF Trigger: GAAATCTTCTTTGTGACTCCTTAGATTCAAGTCTCAAATTGGTAAATGGGTATCATGGAAGTCTAGAGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| 3UTR CCA 72 bp | TTAACAGTTGGAGGACTGCTCAATAATACAGGAGTTTaGCTAGTAGTTATCAGGTCCAAGATTCATTACATA | + |
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Preference number: 3 (lower is better) Translates to: LTVGGLLNNTGV*LVVIRSKIHYI Trigger: TATGTAATGAATCTTGGACCTGATAACTACTAGCCAAACTCCTGTATTATTGAGCAGTCCTCCAACTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
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| 3UTR-3UTR CAA 90 bp | TTCATCAGTAAAACTTTCAACTTAACAGTTGGAGGACTGCTCAATAATACAGGAATAGTGCCAACAATTTaGGCAATCGTAAGTAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: FISKTFNLTVGGLLNNTGIVPTI*AIVSKH Trigger: ATGCTTACTTACGATTGCCAAAATTGTTGGCACTAT...TCCTGTATTATTGAGCAGTCCTCCAACTGTTAAGTTGAAAGTTTTACTGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
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| 3UTR TCA 72 bp | TCTTGTATTTCATTATGGAAATTACTGCATATCTTATaGGCTGCACTTCCTTTGCAGTGCATCCAAACAATT | + |
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Preference number: 3 (lower is better) Translates to: SCISLWKLLHIL*AALPLQCIQTI Trigger: AATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCAGTAATTTCCATAATGAAATACAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAGGAAGTGCTGCCTGCTaGGGAGTCCGCAGTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALGSAAC*GVRSAP Trigger: CGGAGCACTGCGGACTCCGCAGCAGGCAGCACTTCC...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAAGTCTTTCCACTTACTaGCCTGGCCAGGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALSLSTY*PGQGTA Trigger: AGCTGTACCCTGGCCAGGTCAGTAAGTGGAAAGACT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGGGCTGGTCATGAACTaGTCCAGAAGGGGAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRGLVMN*SRRGVK Trigger: CTTCACTCCCCTTCTGGAGCAGTTCATGACCAGCCC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCTGCGGAGTCCGCAGTaGTCCGGAGCTCTTCTACGG | + |
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Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFLRSPQ*SGALLR Trigger: CCGTAGAAGAGCTCCGGAGCACTGCGGACTCCGCAG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATTAGGATTTTGGAAGTaGTGCCTGCTGCGGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALLGFWK*CLLRSP Trigger: CGGACTCCGCAGCAGGCAGCACTTCCAAAATCCTAA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR CCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACTCCTGCTAGGACCATaGACTGCACCAGGTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALLLLGP*TAPGHS Trigger: TGAATGACCTGGTGCAGTCCATGGTCCTAGCAGGAG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAGAAGCTTGCCGCTCATaGAGAAGTTCCAGCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALEACRS*RSSSFS Trigger: CGAAAAGCTGGAACTTCTTCATGAGCGGCAAGCTTC...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACTGGAGCATAGGGCTTaGCCTGGTCTGTCTTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALLEHRA*PGLSFQ Trigger: TTGAAAAGACAGACCAGGTCAAGCCCTATGCTCCAG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGTTTCCCTGCAGAGCTaGTGGTGTAGGCATCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHVSLQS*WCRHLQ Trigger: CTGAAGATGCCTACACCATCAGCTCTGCAGGGAAAC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | AGCATCATTCTCAACTTTTCAACTGAGGTTGTGGAAAACCTGAGAACTGAGATAGGGCTGGTCATGAACTaGTCCAGAAGGGGAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SIILNFSTEVVENLRTEIGLVMN*SRRGVK Trigger: CTTCACTCCCCTTCTGGAGCAGTTCATGACCAGCCC...TATCTCAGTTCTCAGGTTTTCCACAACCTCAGTTGAAAAGTTGAGAATGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
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| CDS-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGGTCTGCCTCTGCAGTaGAAGAATCTGAGCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHGLPLQ*KNLSLQ Trigger: TTGCAGGCTCAGATTCTTGCACTGCAGAGGCAGACC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGTGGTATTCTGCTCCTaGAATGACACGGTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHVVFCS*NDTVCL Trigger: GAGGCAGACCGTGTCATTGCAGGAGCAGAATACCAC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGAAGAAATCCTTCACTaGAGTCTGAGCGGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDREEILH*SLSGWV Trigger: CACCCACCCGCTCAGACTCCAGTGAAGGATTTCTTC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTGGCATTCTGTGTCTaGAGCGTGGTATTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRLAFCV*SVVFCS Trigger: GGAGCAGAATACCACGCTTCAGACACAGAATGCCAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGATCATGAAGCAGACTaGAATCTCCACTGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRDHEAD*NLHCCG Trigger: GCCACAGCAGTGGAGATTTCAGTCTGCTTCATGATC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTTCTGTTCGCTTCATaGCTGGAGAACCACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRFLFAS*LENHRV Trigger: CACCCTGTGGTTCTCCAGGCATGAAGCGAACAGAAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGGATTTTGGAAGTGCTaGCTGCTGCGGAGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFGFWKC*LLRSPQ Trigger: CTGCGGACTCCGCAGCAGGCAGCACTTCCAAAATCC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGCAATGACACGGTCTaGCTCTGCAGTGCAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHCNDTV*LCSARI Trigger: GATTCTTGCACTGCAGAGGCAGACCGTGTCATTGCA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATCTCCTTTTACCCGTTaGAATATCATCAGGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALSPFTR*NIIRDL Trigger: GAGGTCCCTGATGATATTTCAACGGGTAAAAGGAGA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGCTGGTCTTGAAGCATaGACTCTTGATCCCGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRAGLEA*TLDPVL Trigger: TAGTACGGGATCAAGAGTTCATGCTTCAAGACCAGC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATACCTACTGTCATCAGTaGTCTGCTCATCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHTYCHQ*SAHRVG Trigger: TCCTACACGATGAGCAGAGCACTGATGACAGTAGGT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGACAGTGCTTGCTTCTCTaGTTGCAGCGTAGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRQCLLL*LQRSIV Trigger: AACAATGCTACGCTGCAAGCAGAGAAGCAAGCACTG...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACAGTTGAGTTTTCAGTaGTTGCTTCTCTGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALQLSFQ*LLLCLQ Trigger: CTGCAAGCAGAGAAGCAAGCACTGAAAACTCAACTG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCTCTACGAACAGGAGCATCATTCTCAACTTTTCAACTGAGGTTGTGGATTTGGAGCATGACCTaGTTCAAGAATACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSLRTGASFSTFQLRLWIWSMT*FKNTPS Trigger: GGATGGGGTATTCTTGAACCAGGTCATGCTCCAAAT...CCACAACCTCAGTTGAAAAGTTGAGAATGATGCTCCTGTTCGTAGAGAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATCAACTTTTAGGATTTTaGAAGTGCTGCCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHQLLGF*KCCLLR Trigger: CCGCAGCAGGCAGCACTTCCAAAATCCTAAAAGTTG...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGGAGTCTGAGCGGGTaGGTGTTAGTGTTAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHWSLSG*VLVLEI Trigger: AATCTCTAACACTAACACCCACCCGCTCAGACTCCA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATGCCACTATCAAGGCTaGCTGGTCTTGAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRCHYQG*LVLKHE Trigger: TTCATGCTTCAAGACCAGCCAGCCTTGATAGTGGCA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGGTTCTATGTCTTCCTaGGACATATCTGTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHGSMSS*DISVTS Trigger: GGAAGTGACAGATATGTCTCAGGAAGACATAGAACC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATCAAGTTGCTTCAGTTaGGTTTTCAGTGCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALSSCFS*VFSACF Trigger: GAAGCAAGCACTGAAAACTCAACTGAAGCAACTTGA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATACCTCTTGAATGTGTaGAGCAACTGCTGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRYLLNV*SNCCFR Trigger: ACGAAAGCAGCAGTTGCTGCACACATTCAAGAGGTA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGCTTGCTTCTCTGCTTaGAGCGTAGCATTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHACFSA*SVALFL Trigger: AAGAAACAATGCTACGCTGCAAGCAGAGAAGCAAGC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAGTTTCAGATATTTTGTaGTGGAGCATAGGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALVSDIL*WSIGLD Trigger: GTCAAGCCCTATGCTCCAGCACAAAATATCTGAAAC...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTGGTGTAGGTTTCCCTaGAGAGCTGATGGTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFWCRFP*RADGVG Trigger: GCCTACACCATCAGCTCTGCAGGGAAACCTACACCA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAATTTGGAGCATGACCTaGTTCAAGAATACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRIWSMT*FKNTPS Trigger: GGATGGGGTATTCTTGAACCAGGTCATGCTCCAAAT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTGGTCCCCAGGGTTTaGCCATCTTCTAAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRLVPRV*PSSKEF Trigger: AAACTCTTTAGAAGATGGCCAAACCCTGGGGACCAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATACTGCTGTGGCTTTGTaGCCTGCTTTGGATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHTAVAL*PALDIN Trigger: GTTAATATCCAAAGCAGGCCACAAAGCCACAGCAGT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| 3UTR CAA 72 bp | TATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATaGGCTCTAGAAACAAAAACAATAACCAGCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: YELHFLCSASKQ*ALETKTITSVP Trigger: TGGTACGCTGGTTATTGTTTTTGTTTCTAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| 3UTR CAA 72 bp | AAAGTGACTATAAAAACCATCTCAAACAATGGTATCTaGTCGTGCATGGACTCCTGTGACAGACATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVTIKTISNNGI*SCMDSCDRHQV Trigger: CACCTGATGTCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTATAGTCACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGCATGGGGTAGGAAATaGACACCATCTCGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFAWGRK*TPSRSS Trigger: AGAAGAGCGAGATGGTGTTCATTTCCTACCCCATGC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCAAGCTTATCAACTCTaGCTGCTTTCTCTCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFQAYQL*LLSLGG Trigger: CCCTCCGAGAGAAAGCAGTCAGAGTTGATAAGCTTG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAAAGCTTCTTGTACTCTaGAGCTACCACTTCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRKLLVL*SYHFMV Trigger: AACCATGAAGTGGTAGCTTCAGAGTACAAGAAGCTT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATCCTAGACCTGCTTTTTaGATTTCTGCTCTCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHPRPAF*ISALLY Trigger: GTACAAGAGAGCAGAAATTCAAAAAGCAGGTCTAGG...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGTTAGTCCCATTTCCTaGAGCCAGAGGTCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFVSPIS*SQRSKR Trigger: ACGTTTGGACCTCTGGCTGCAGGAAATGGGACTAAC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TTCATCAGTAAAACTTTCAACTTAACAGTTGGAGGACTGCTCAATAATACAGGAGTTAGTCCCATTTCCTaGAGCCAGAGGTCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: FISKTFNLTVGGLLNNTGVSPIS*SQRSKR Trigger: ACGTTTGGACCTCTGGCTGCAGGAAATGGGACTAAC...TCCTGTATTATTGAGCAGTCCTCCAACTGTTAAGTTGAAAGTTTTACTGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
||
| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATTATTATTAACCAACTaGTTGGATCGGAAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALLLLTN*LDRKAA Trigger: TGCAGCCTTCCGATCCAAGCAGTTGGTTAATAATAA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTTGTTCACATTAGATaGTGTAGTGCTGCTGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRFVHIR*CSAAAT Trigger: GGTAGCAGCAGCACTACAGCATCTAATGTGAACAAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGCCCAAGGACTTCTGTaGTGCTTCAGCAAGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFAQGLL*CFSKFT Trigger: AGTGAACTTGCTGAAGCACCACAGAAGTCCTTGGGC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGAAGCTACCACTTCATaGTTTTTGCTTTCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHEATTS*FLLSSS Trigger: GCTGCTTGAAAGCAAAAACCATGAAGTGGTAGCTTC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCAAATCTCCACTGCTGTaGCTTTGTGGCCTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFKSPLL*LCGLLW Trigger: CCAAAGCAGGCCACAAAGCCACAGCAGTGGAGATTT...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATTGCACGAGGTAAAGTaGCATAAGGATTGCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALLHEVK*HKDCYL Trigger: AAGATAGCAATCCTTATGCCACTTTACCTCGTGCAA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTCTCTACGAACAGGAGCATCATTCTCAACTTTTCAACTGAGGTTGTGGAGGGATTTTTGCCAATaGTTAAGATATCTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLRTGASFSTFQLRLWRDFCQ*LRYLAM Trigger: CATTGCCAGATATCTTAATCATTGGCAAAAATCCCT...CCACAACCTCAGTTGAAAAGTTGAGAATGATGCTCCTGTTCGTAGAGAGAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAAGTTCCAGCTTTTCGTaGTCTTTTATCAGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRSSSFS*SFIRAS Trigger: TGATGCTCTGATAAAAGATCACGAAAAGCTGGAACT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGTGATATCTAGTTGCTaGTACTGCTCCTTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRVISSC*YCSFSF Trigger: AAAGCTAAAGGAGCAGTATCAGCAACTAGATATCAC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAAGTGTTAGAGATTTCTaGCGTTCCCGATTAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALSVRDF*RSRLIS Trigger: AGATATTAATCGGGAACGTCAGAAATCTCTAACACT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAGAAGAGTTGACAGTTaGAAAGTTGATGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHRRVDS*KVDGCS Trigger: ACTACAGCCATCAACTTTTCAACTGTCAACTCTTCT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGTCTTTTCAAATACTaGATTGGACTGCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHCLFKY*IGLLPL Trigger: CAGTGGTAGCAGTCCAATTCAGTATTTGAAAAGACA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGCATCTTCAGTCTTTTaGGGACCAGTTCTCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHASSVF*GPVLKN Trigger: ATTTTTGAGAACTGGTCCTCAAAAGACTGAAGATGC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAGTTTTATCTTTCCTTaGGTGCTTGGTGTAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHSFIFP*VLGVGF Trigger: GAAACCTACACCAAGCACTCAAGGAAAGATAAAACT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAAATGTGTGCAGCAACTaGTGCTTTCGTATCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRNVCSN*CFRIKI Trigger: GATTTTGATACGAAAGCAGCAGTTGCTGCACACATT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTTTCTTCCAATTCCTaGCTAAGTCTTCGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRFSSNS*LSLRIL Trigger: CAAGATCCGAAGACTTAGGCAGGAATTGGAAGAAAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGTTTTCAAGTTCTTCTaGTCGCTCTCCTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRVFKFF*SLSFLF Trigger: AAAGAGAAAGGAGAGCGAGCAGAAGAACTTGAAAAC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTGCTTTCCATATTTTaGTCCAGCAGTGTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRLLSIF*SSSVLF Trigger: GAACAGAACACTGCTGGAGCAAAATATGGAAAGCAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAAATTTCCTTTAAGTTaGCTGAGCAACTCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHKFPLS*LSNSHW Trigger: CCAGTGTGAGTTGCTCAGCCAACTTAAAGGAAATTT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACCTTCTAGGAGGAGATaGGTCATAAAATTTGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALPSRRR*VIKFVL Trigger: CAATACAAATTTTATGACCCATCTCCTCCTAGAAGG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCTTTCCTTGAGTGCTTaGTGTAGGTTTCCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFLSLSA*CRFPCR Trigger: TCTGCAGGGAAACCTACACCAAGCACTCAAGGAAAG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| 3UTR CAA 72 bp | TGTGACAGACATCAGGTGCCACCGAGGAAAGTTGTTTaGTTATTCAACTCTACCTCCCTTATTAGCATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDRHQVPPRKVV*LFNSTSLISIN Trigger: ATTAATGCTAATAAGGGAGGTAGAGTTGAATAACAAAACAACTTTCCTCGGTGGCACCTGATGTCTGTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAGGGATTTTTGCCAATaGTTAAGATATCTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHRDFCQ*LRYLAM Trigger: CATTGCCAGATATCTTAATCATTGGCAAAAATCCCT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTTCTACAATAGTCTCTaGATGTTCATCTCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHFYNSL*MFISLI Trigger: GATGAGAGAGATGAACATTCAGAGACTATTGTAGAA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTTGTCCTTTTCAAGTTaGGATGTCTCTTGCTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHLSFSS*DVSCSN Trigger: ATTAGAGCAAGAGACATCTCAACTTGAAAAGGACAA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTCTTCAATTTCTCACTaGCTAAATCCTCACGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHSSISH*LNPHVM Trigger: CATTACGTGAGGATTTAGTCAGTGAGAAATTGAAGA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGCAGTGCAAGAATCTaGGCCTGCAAATTATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLVNSLVTTNSENLEPKHCSARI*ACKLLF Trigger: AAATAATAATTTGCAGGCTCAGATTCTTGCACTGCA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCAATTCCACTGAGAGATaGTGTCGACTTTCTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFNSTER*CRLSVR Trigger: GCGAACAGAAAGTCGACAGCATCTCTCAGTGGAATT...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGGTATCTTTTATTTCTaGTTGTTGTCGGAGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRGIFYF*LLSESF Trigger: AAACGACTCCGACAACAAGCAGAAATAAAAGATACC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAAAGTGGCATAAGGATTaGTATCTTTTGATTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALKWHKD*YLLIVL Trigger: CAAGACAATCAAAAGATAGCAATCCTTATGCCACTT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCTCCAGAGACTGGAATaGAACTCTGTACCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFLQRLE*NSVPSF Trigger: AAAGGATGGTACAGAGTTCCATTCCAGTCTCTGGAG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAAGAAGCTGTGCATTCTaGTTCATAAGTGAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRRSCAF*FISEVL Trigger: AAGTACTTCACTTATGAACCAGAATGCACAGCTTCT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAATCACTAATACCTTGTaGACTTATGTCTTCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CISYELHFLCSASKQLALITNTL*TYVFKG Trigger: TCCTTTGAAGACATAAGTCCACAAGGTATTAGTGAT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTTCAAATACTGAATTaGACTGCTACCACTGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRFQILN*TATTAR Trigger: TCTAGCAGTGGTAGCAGTCCAATTCAGTATTTGAAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGTAGAATTTTCAACCTaGAGCTTGGCATTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFVEFST*SLAFCV Trigger: GACACAGAATGCCAAGCTTCAGGTTGAAAATTCTAC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGTCACTTCCATCCATTaGAGATCAAATACATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRVTSIH*RSNTFS Trigger: AGAAAATGTATTTGATCTGCAATGGATGGAAGTGAC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATCCATCTCCATATCATaGAATTTAGCCTTTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKTISNNGILSCMDSCDRSISIS*NLAFSC Trigger: ACAACTAAAGGCTAAATTGCATGATATGGAGATGGA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCAATTCATTTACCTCATaGCCCAAGGACTTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFNSFTS*PKDFCG Trigger: ACCACAGAAGTCCTTGGGCCATGAGGTAAATGAATT...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTCTAAGGAAGACTGCTaGATTAGAAGCTGTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFSKEDC*IRSCAF Trigger: GAATGCACAGCTTCTAATCCAGCAGTCTTCCTTAGA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTCTAAAAGATTCTCTTaGCTCGAGGACTTCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFSKRFS*LEDFNC Trigger: ACAGTTGAAGTCCTCGAGTCAAGAGAATCTTTTAGA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTTCATGTTCTCTTGTTaGAGCCTCTTCAATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFFMFSC*SLFNST Trigger: AGTGGAATTGAAGAGGCTGCAACAAGAGAACATGAA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGACTTAGGATTAATTTaGAGCATGACCTGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFDLGLI*SMTWFK Trigger: CTTGAACCAGGTCATGCTCCAAATTAATCCTAAGTC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | TTCATCAGTAAAACTTTCAACTTAACAGTTGGAGGACTGCTCAATAATACAGGAGACTTAGGATTAATTTaGAGCATGACCTGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISKTFNLTVGGLLNNTGDLGLI*SMTWFK Trigger: CTTGAACCAGGTCATGCTCCAAATTAATCCTAAGTC...TCCTGTATTATTGAGCAGTCCTCCAACTGTTAAGTTGAAAGTTTTACTGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCGAGTTCCTTCTAGTTaGTCTTCCAGCATAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFRVPSS*SSSIVF Trigger: AAAAACTATGCTGGAAGACCAACTAGAAGGAACTCG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCATGAAAGAGATCCTTaGTTTCCATATTTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFHERDP*FPYFAP Trigger: TGGAGCAAAATATGGAAAGCAAGGATCTCTTTCATG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCGTTTTCGTCAGACTCTaGTTTTCCATTTCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFVFVRL*FSISNF Trigger: AAAGTTGGAAATGGAAAACCAGAGTCTGACGAAAAC...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCATACTTTGTTTCTGTaGCATTTCCAGAGTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: KRLTCQNNFLCILIYSTFHTLFL*HFQSHI Trigger: AATATGACTCTGGAAATGGCACAGAAACAAAGTATG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS GCA 90 bp | CAGCCAATTCCACTGAGAGATGCTGTCGACTTTCTGTTCGCTTCATaGCTGGAGAACCACAGGGTGACTGTGCAGATGAAGAGGCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLRDAVDFLFAS*LENHRVTVQMKRHG Trigger: CCCATGCCTCTTCATCTGCACAGTCACCCTGTGGTTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTCTCAGTGGAATTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | CTGCCTAAGTCTTCGGATCTTGGCTTTAGCATCAGCCAATTCCACTaGGAGATGCTGTCGACTTTCTGTTCGCTTCATGCCTGGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LPKSSDLGFSISQFH*EMLSTFCSLHAWRT Trigger: GGTTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTCTCAGTGGAATTGGCTGATGCTAAAGCCAAGATCCGAAGACTTAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | AAGCTTGGCATTCTGTGTCTGAAGCGTGGTATTCTGCTCCTGCAATaGCACGGTCTGCCTCTGCAGTGCAAGAATCTGAGCCTGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: KLGILCLKRGILLLQ*HGLPLQCKNLSLQI Trigger: AATTTGCAGGCTCAGATTCTTGCACTGCAGAGGCAGACCGTGTCATTGCAGGAGCAGAATACCACGCTTCAGACACAGAATGCCAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | AGTTGTCCGTCTATCATAGAAGTCCCCTGGAGTCTTTCCACTTACTaGCCTGGCCAGGGTACAGCTAACTGGCTTGTCTTTCCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCPSIIEVPWSLSTY*PGQGTANWLVFPQK Trigger: TTTCTGGGGAAAGACAAGCCAGTTAGCTGTACCCTGGCCAGGTCAGTAAGTGGAAAGACTCCAGGGGACTTCTATGATAGACGGACAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
||
| CDS GCA 90 bp | AGTCTTCGGATCTTGGCTTTAGCATCAGCCAATTCCACTGAGAGATaGTGTCGACTTTCTGTTCGCTTCATGCCTGGAGAACCACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRILALASANSTER*CRLSVRFMPGEPQG Trigger: ACCCTGTGGTTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTCTCAGTGGAATTGGCTGATGCTAAAGCCAAGATCCGAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS CCA 90 bp | TGCACCAGGTCATTCATGGTGCTGCTCTTCTTGGTCCCCAGGGTTTaGCCATCTTCTAAAGAGTTTGATCCTACTGAAGAGCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTRSFMVLLFLVPRV*PSSKEFDPTEELSW Trigger: CCAAGACAGCTCTTCAGTAGGATCAAACTCTTTAGAAGATGGCCAAACCCTGGGGACCAAGAAGAGCAGCACCATGAATGACCTGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 |
||
| CDS CCA 90 bp | GTGTCTTCAGAATGTGTTGGCATGTCAGAGGACCACTGCTGTAAATaGTACTCACTAGATGCTGTAGTGCTGCTGCTACCAGCAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSSECVGMSEDHCCK*YSLDAVVLLLPAVG Trigger: ACCTACTGCTGGTAGCAGCAGCACTACAGCATCTAGTGAGTACCATTTACAGCAGTGGTCCTCTGACATGCCAACACATTCTGAAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAATGGTGCTGCTCTTCTaGGTCCCCAGGGTTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALMVLLF*VPRVWP Trigger: TGGCCAAACCCTGGGGACCAAGAAGAGCAGCACCAT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS TCA 90 bp | GAACCACAGGGTGACTGTGCAGATGAAGAGGCATGGGGTAGGAAATaGACACCATCTCGCTCTTCTGAGAGTTCTACAATAGTCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EPQGDCADEEAWGRK*TPSRSSESSTIVSE Trigger: TTCAGAGACTATTGTAGAACTCTCAGAAGAGCGAGATGGTGTTCATTTCCTACCCCATGCCTCTTCATCTGCACAGTCACCCTGTGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS GCA 90 bp | GACTCAGATGTGTCTTCAGAATGTGTTGGCATGTCAGAGGACCACTaGTGTAAATGGTACTCACTAGATGCTGTAGTGCTGCTGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: DSDVSSECVGMSEDH*CKWYSLDAVVLLLP Trigger: TGGTAGCAGCAGCACTACAGCATCTAGTGAGTACCATTTACAGCAGTGGTCCTCTGACATGCCAACACATTCTGAAGACACATCTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
||
| CDS CCA 90 bp | AGTCTTTTCAGTGCAACCATGCTGCTCTTCTTGGTCCCCAGGGTTTaGCCATCTTCTAAAGAGTTTGATCCTACTGAAGAGCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLFSATMLLFLVPRV*PSSKEFDPTEELSW Trigger: CCAAGACAGCTCTTCAGTAGGATCAAACTCTTTAGAAGATGGCCAAACCCTGGGGACCAAGAAGAGCAGCATGGTTGCACTGAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140194.2 ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACTTTCTCGGCCCCACTaGTCATCTTCTCCAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALLSRPH*SSSPET Trigger: AGTCTCTGGAGAAGATGACAAGTGGGGCCGAGAAAG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS TCA 90 bp | GCCTCAGCACTAATCTGGGAGCGCTGCCGTAAGGAAGACACTGTTTaGTTCAGATGTTCATTTTCCTGCTCCAATATTTTAATCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASALIWERCRKEDTV*FRCSFSCSNILICL Trigger: GAGGCAGATTAAAATATTGGAGCAGGAAAATGAACATCTGAATCAAACAGTGTCTTCCTTACGGCAGCGCTCCCAGATTAGTGCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | AGCAGACTTCAGGGTGCCATGTTTAGAGATCAGAGACTCATACTCTaGAGCTTGCCGCTCATGAAGAAGTTCCAGCTTTTCGTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRLQGAMFRDQRLIL*SLPLMKKFQLFVIF Trigger: AAAGATCACGAAAAGCTGGAACTTCTTCATGAGCGGCAAGCTTCAGAGTATGAGTCTCTGATCTCTAAACATGGCACCCTGAAGTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | TGTAGAGTAACAACTTCACTTCCTGGGGAGCCAGCTTTCATCTTGTaGTGGGCTCGACTCTCTATTGTTTCAGATATTTTGTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CRVTTSLPGEPAFIL*WARLSIVSDILCWS Trigger: GCTCCAGCACAAAATATCTGAAACAATAGAGAGTCGAGCCCATCACAAGATGAAAGCTGGCTCCCCAGGAAGTGAAGTTGTTACTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATGCTGTCTTGGCTGTCTaGATGGGGCAGCTGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHAVLAV*MGQLKK Trigger: TTTCTTCAGCTGCCCCATCAAGACAGCCAAGACAGC...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAGCTTTGTGGCCTGCTTaGGATATTAACTGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALALWPA*DINCTC Trigger: GCAGGTGCAGTTAATATCCAAAGCAGGCCACAAAGC...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTATCCACTGCTGTGGCTTaGTGGCCTGCTTTGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALSTAVA*WPALDI Trigger: AATATCCAAAGCAGGCCACAAAGCCACAGCAGTGGA...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS CCA 90 bp | TGTTTGTTATCTTTCTGTGCAGTTTTATCCAAAGAGGCAAAGGTCTaGCCAGTTATTCTAGTGAGTGGTGACTTGGGAGGTAACCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLSFCAVLSKEAKV*PVILVSGDLGGNPL Trigger: AAGTGGGTTACCTCCCAAGTCACCACTCACTAGAATAACTGGCCAGACCTTTGCCTCTTTGGATAAAACTGCACAGAAAGATAACAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATCAACTTTTAGGATTTaGGAAGTGCTGCCTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRSTFRI*EVLPAA Trigger: CGCAGCAGGCAGCACTTCCAAAATCCTAAAAGTTGA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAAGCGTTCTGTCTTCTaGAAAGAGGCTCTCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHKRSVF*KEALMS Trigger: GCTCATGAGAGCCTCTTTCAAGAAGACAGAACGCTT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATTGCTTGCTTCTCTGCTaGCAGCGTAGCATTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHCLLLC*QRSIVS Trigger: AGAAACAATGCTACGCTGCAAGCAGAGAAGCAAGCA...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS CCA 90 bp | GAGTCCGCAGTGCTCCGGAGCTCTTCTACGGTTTTCGTCAGACTCTaGTTTTCCATTTCCAACTTTAATAACTTACTTGATGTTAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESAVLRSSSTVFVRL*FSISNFNNLLDVNS Trigger: TGAATTAACATCAAGTAAGTTATTAAAGTTGGAAATGGAAAACCAGAGTCTGACGAAAACCGTAGAAGAGCTCCGGAGCACTGCGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | ACGAACAGGAGCATCATTCTCAACTTTTCAACTGAGGTTGTGGAAAACCTGAGACGACTTAGGATTAATTaGGAGCATGACCTGGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TNRSIILNFSTEVVENLRRLRIN*EHDLVQ Trigger: TTGAACCAGGTCATGCTCCAAATTAATCCTAAGTCG...TCTCAGGTTTTCCACAACCTCAGTTGAAAAGTTGAGAATGATGCTCCTGTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109477.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTTAGAGTAATCCAGTaGCCTCTCCTTCTAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRFRVIQ*PLLLGG Trigger: TCCTCCTAGAAGGAGAGGCAACTGGATTACTCTAAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTATTAACCAACTGCTaGGATCGGAAGGCTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRLLTNC*DRKAAE Trigger: TTCTGCAGCCTTCCGATCCAAGCAGTTGGTTAATAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATTAACTGCACCTGCTTaGACTTCATGGAGTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRLTAPA*TSWSEA Trigger: TGCTTCACTCCATGAAGTCAAAGCAGGTGCAGTTAA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATCGACTTAGGATTAATTaGGAGCATGACCTGGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHRLRIN*EHDLVQ Trigger: TTGAACCAGGTCATGCTCCAAATTAATCCTAAGTCG...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATATTATGAGTTACCTCTaGAATGTGTGCAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHIMSYL*NVCSNC Trigger: GCAGTTGCTGCACACATTCAAGAGGTAACTCATAAT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAATTCATGTTCTCTTGTaGCAGCCTCTTCAATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRIHVLL*QPLQFH Trigger: GTGGAATTGAAGAGGCTGCAACAAGAGAACATGAAT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATCTAATTCATGTAGTTaGTCAGAACGAGCCCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRSNSCS*SERARV Trigger: AACTCGGGCTCGTTCTGACAAACTACATGAATTAGA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATCTTGCTTTCCATATTTaGCTCCAGCAGTGTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHLAFHI*LQQCSV Trigger: AACAGAACACTGCTGGAGCAAAATATGGAAAGCAAG...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTACATCTTCTAAAGAGTTaGATCCTACTGAAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALHLLKS*ILLKSC Trigger: ACAGCTCTTCAGTAGGATCAAACTCTTTAGAAGATG...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCAAGGCTGGCTGGTCTaGAAGCATGAACTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFQGWLV*KHELLI Trigger: GATCAAGAGTTCATGCTTCAAGACCAGCCAGCCTTG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGACAAATTCATGTTCTCTaGTTGCAGCCTCTTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRQIHVL*LQPLQF Trigger: GAATTGAAGAGGCTGCAACAAGAGAACATGAATTTG...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAAGTTGTTCCAGTCTTTaGCTAGATATTTTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALSCSSL*LDIFSS Trigger: GGAACTGAAAATATCTAGCAAAAGACTGGAACAACT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAAAGTTCGTGGCGCAATaGCTGATTGTAATTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRKFVAQ*LIVICR Trigger: TCTACAAATTACAATCAGCAATTGCGCCACGAACTT...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGAGCTTGCAGCGTAGCATaGTTTCTTTCTACTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRACSVA*FLSTSI Trigger: AATTGAAGTAGAAAGAAACAATGCTACGCTGCAAGC...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGCATATCTTATGAGCTGCACTTCCTTTGCAGTGCATCCAAACAATTGGCTCTAATTGAGGTAAGCTTGTaGCTTTCTTCCAAAAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CISYELHFLCSASKQLALIEVSL*LSSKNC Trigger: ACAGTTTTTGGAAGAAAGCAACAAGCTTACCTCAAT...TAGAGCCAATTGTTTGGATGCACTGCAAAGGAAGTGCAGCTCATAAGATATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTCGTGAACTCTTTGGTAACCACCAACTCAGAAAACCTTGAACCAAAACATAAGGATTGCTATCTTTaGATTGTCTTGACACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLVNSLVTTNSENLEPKHKDCYL*IVLTQR Trigger: CCTCTGTGTCAAGACAATCAAAAGATAGCAATCCTT...ATGTTTTGGTTCAAGGTTTTCTGAGTTGGTGGTTACCAAAGAGTTCACGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATGTCACTTCCATCCATaGCAGATCAAATACATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRCHFHP*QIKYIF Trigger: GAAAATGTATTTGATCTGCAATGGATGGAAGTGACA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCTAAGTCTTCGGATCTaGGCTTTAGCATCAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFLSLRI*ALASAN Trigger: ATTGGCTGATGCTAAAGCCAAGATCCGAAGACTTAG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTCACCACAAAGCTTCTaGTACTCTGAAGCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFSPQSF*YSEATT Trigger: AGTGGTAGCTTCAGAGTACAAGAAGCTTTGTGGTGA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACCATCTCAAACAATGGTATCTTGTCGTGCATGGACTCCTGTGACAGATGTATTGAGGTAAGCTaGTTGCTTTCTTCCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IKTISNNGILSCMDSCDRCIEVS*LLSSKN Trigger: GTTTTTGGAAGAAAGCAACAAGCTTACCTCAATACA...TCTGTCACAGGAGTCCATGCACGACAAGATACCATTGTTTGAGATGGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS GCA 90 bp | AAATTCATGTTCTCTTGTTGCAGCCTCTTCAATTCCACTTCTATTTaGTCAAGTTCTTGTTTACAGTCCAGTAACTGCTCAGTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KFMFSCCSLFNSTSI*SSSCLQSSNCSVFS Trigger: AGAAAAGACTGAGCAGTTACTGGACTGTAAACAAGAACTTGAGCAAATAGAAGTGGAATTGAAGAGGCTGCAACAAGAGAACATGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS CCA 90 bp | ATTTCCAACTTTAATAACTTACTTGATGTTAATTCATTTACCTCATaGCCCAAGGACTTCTGTGGTGCTTCAGCAAGTTCACTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISNFNNLLDVNSFTS*PKDFCGASASSLVL Trigger: CAGAACTAGTGAACTTGCTGAAGCACCACAGAAGTCCTTGGGCCATGAGGTAAATGAATTAACATCAAGTAAGTTATTAAAGTTGGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTTCTCCTTTTACCCGTaGAAATATCATCAGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFFSFYP*KYHQGP Trigger: AGGTCCCTGATGATATTTCAACGGGTAAAAGGAGAA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS TCA 90 bp | CTTAGATGTGACACCATATTCTTTAAGAGTGGTTCTATGTCTTCCTaGGACATATCTGTCACTTCCATCCATTGCAGATCAAATACATTT | + |
|
Preference number: 5 (lower is better) Translates to: LRCDTIFFKSGSMSS*DISVTSIHCRSNTF Trigger: AAATGTATTTGATCTGCAATGGATGGAAGTGACAGATATGTCTCAGGAAGACATAGAACCACTCTTAAAGAATATGGTGTCACATCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS TCA 90 bp | AACTCACACTGGTTATTTAGCTTGGTAGATGTGATATCTAGTTGCTaGTACTGCTCCTTTAGCTTTGAAAATTCAGCTTCTAATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSHWLFSLVDVISSC*YCSFSFENSASNLV Trigger: AACAAGATTAGAAGCTGAATTTTCAAAGCTAAAGGAGCAGTATCAGCAACTAGATATCACATCTACCAAGCTAAATAACCAGTGTGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCTTTGATTCCAAAAGTTaGTACCTACTGTCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFFDSKS*YLLSSV Trigger: CACTGATGACAGTAGGTACAAACTTTTGGAATCAAA...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCTGACATGCCAGAACAATTTCCTCTGTATCTTGATATATAGTACATTCCACTGGTTATTTAGCTaGGTAGATGTGATATCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KRLTCQNNFLCILIYSTFHWLFS*VDVISS Trigger: ACTAGATATCACATCTACCAAGCTAAATAACCAGTG...GAATGTACTATATATCAAGATACAGAGGAAATTGTTCTGGCATGTCAGCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
||
| CDS GCA 72 bp | GGATTTTGGAAGTGCTGCCTGCTGCGGAGTCCGCAGTaGTCCGGAGCTCTTCTACGGTTTTCGTCAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFWKCCLLRSPQ*SGALLRFSSDS Trigger: AGAGTCTGACGAAAACCGTAGAAGAGCTCCGGAGCACTGCGGACTCCGCAGCAGGCAGCACTTCCAAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS GCA 72 bp | GCTCCTTGTTCTCTAGCTGGAGCTGGGCCATTCTCATaGTCGCACACTTCAGAGACTCCACGCTCCTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: APCSLAGAGPFS*SHTSETPRSFA Trigger: TGCGAAGGAGCGTGGAGTCTCTGAAGTGTGCGAGCATGAGAATGGCCCAGCTCCAGCTAGAGAACAAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS GCA 72 bp | CCACTGAGAGATGCTGTCGACTTTCTGTTCGCTTCATaGCTGGAGAACCACAGGGTGACTGTGCAGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLRDAVDFLFAS*LENHRVTVQMK Trigger: CTTCATCTGCACAGTCACCCTGTGGTTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTCTCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
||
| CDS CAA 90 bp | TGCTGCTCTTCTTGGTCCCCAGGGTTTGGCCATCTTCTAAAGAGTTaGATCCTACTGAAGAGCTGTCTTGGCTGTCTTGATGGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CCSSWSPGFGHLLKS*ILLKSCLGCLDGAA Trigger: AGCTGCCCCATCAAGACAGCCAAGACAGCTCTTCAGTAGGATCAAACTCTTTAGAAGATGGCCAAACCCTGGGGACCAAGAAGAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
||
| CDS CAA 72 bp | CCACTTACTGACCTGGCCAGGGTACAGCTAACTGGCTaGTCTTTCCCCAGAAAGTCGGAAGACACAGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PLTDLARVQLTG*SFPRKSEDTDK Trigger: TTTGTCTGTGTCTTCCGACTTTCTGGGGAAAGACAAGCCAGTTAGCTGTACCCTGGCCAGGTCAGTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
||
| CDS CCA 72 bp | TTTCAACCTGAAGCTTGGCATTCTGTGTCTGAAGCGTaGTATTCTGCTCCTGCAATGACACGGTCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FQPEAWHSVSEA*YSAPAMTRSAS Trigger: AGAGGCAGACCGTGTCATTGCAGGAGCAGAATACCACGCTTCAGACACAGAATGCCAAGCTTCAGGTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
||
| CDS CCA 72 bp | GCAGCTGAAGAAATCCTTCACTGGAGTCTGAGCGGGTaGGTGTTAGTGTTAGAGATTTCTGACGTTCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAEEILHWSLSG*VLVLEISDVPD Trigger: ATCGGGAACGTCAGAAATCTCTAACACTAACACCCACCCGCTCAGACTCCAGTGAAGGATTTCTTCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
||
| CDS TCA 72 bp | CTGTCTTTAACTTTCAGGAGCTCTCTAGTCGCTTCTTaGCTTTCTCGGCCCCACTTGTCATCTTCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLTFRSSLVAS*LSRPHLSSSPE Trigger: CTCTGGAGAAGATGACAAGTGGGGCCGAGAAAGTCAAGAAGCGACTAGAGAGCTCCTGAAAGTTAAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000155854.8 ENSMUST00000239407.2 |
||
| CDS TCA 72 bp | TCTATCATAGAAGTCCCCTGGAGTCTTTCCACTTACTaGCCTGGCCAGGGTACAGCTAACTGGCTTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SIIEVPWSLSTY*PGQGTANWLVF Trigger: AAAGACAAGCCAGTTAGCTGTACCCTGGCCAGGTCAGTAAGTGGAAAGACTCCAGGGGACTTCTATGATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS CCA 72 bp | GAATGTGTTGGCATGTCAGAGGACCACTGCTGTAAATaGTACTCACTAGATGCTGTAGTGCTGCTGCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: ECVGMSEDHCCK*YSLDAVVLLLP Trigger: TGGTAGCAGCAGCACTACAGCATCTAGTGAGTACCATTTACAGCAGTGGTCCTCTGACATGCCAACACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS CAA 90 bp | GGAGTCTTTCCACTTACTGACCTGGCCAGGGTACAGCTAACTGGCTaGTCTTTCCCCAGAAAGTCGGAAGACACAGACAAACTTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: GVFPLTDLARVQLTG*SFPRKSEDTDKLFI Trigger: AATGAAAAGTTTGTCTGTGTCTTCCGACTTTCTGGGGAAAGACAAGCCAGTTAGCTGTACCCTGGCCAGGTCAGTAAGTGGAAAGACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | GGTGACTGTGCAGATGAAGAGGCATGGGGTAGGAAATaGACACCATCTCGCTCTTCTGAGAGTTCTACAATA | + |
|
Preference number: 6 (lower is better) Translates to: GDCADEEAWGRK*TPSRSSESSTI Trigger: TATTGTAGAACTCTCAGAAGAGCGAGATGGTGTTCATTTCCTACCCCATGCCTCTTCATCTGCACAGTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | CAGGGTGCCATGTTTAGAGATCAGAGACTCATACTCTaGAGCTTGCCGCTCATGAAGAAGTTCCAGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QGAMFRDQRLIL*SLPLMKKFQLF Trigger: GAAAAGCTGGAACTTCTTCATGAGCGGCAAGCTTCAGAGTATGAGTCTCTGATCTCTAAACATGGCACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | ATCTTGGCTTTAGCATCAGCCAATTCCACTGAGAGATaGTGTCGACTTTCTGTTCGCTTCATGCCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ILALASANSTER*CRLSVRFMPGE Trigger: TTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTCTCAGTGGAATTGGCTGATGCTAAAGCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | GTGTCTTCAGAATGTGTTGGCATGTCAGAGGACCACTaGTGTAAATGGTACTCACTAGATGCTGTAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSECVGMSEDH*CKWYSLDAVVL Trigger: CAGCACTACAGCATCTAGTGAGTACCATTTACAGCAGTGGTCCTCTGACATGCCAACACATTCTGAAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS CCA 72 bp | ACTTTCTCGGCCCCACTTGTCATCTTCTCCAGAGACTaGAATGGAACTCTGTACCATCCTTTCTTCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TFSAPLVIFSRD*NGTLYHPFFIL Trigger: CAAGATGAAGAAAGGATGGTACAGAGTTCCATTCCAGTCTCTGGAGAAGATGACAAGTGGGGCCGAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | AACTGCTCAGTCTTTTCTTCCAATTCCTGCCTAAGTCTTCGGATCTaGGCTTTAGCATCAGCCAATTCCACTGAGAGATGCTGTCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: NCSVFSSNSCLSLRI*ALASANSTERCCRL Trigger: AAGTCGACAGCATCTCTCAGTGGAATTGGCTGATGCTAAAGCCAAGATCCGAAGACTTAGGCAGGAATTGGAAGAAAAGACTGAGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | AGTCTCATGATCATGAAGCAGACTGAAATCTCCACTGCTGTGGCTTaGTGGCCTGCTTTGGATATTAACTGCACCTGCTTTGACTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLMIMKQTEISTAVA*WPALDINCTCFDFM Trigger: CATGAAGTCAAAGCAGGTGCAGTTAATATCCAAAGCAGGCCACAAAGCCACAGCAGTGGAGATTTCAGTCTGCTTCATGATCATGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | TGTAGGTTTCCCTGCAGAGCTGATGGTGTAGGCATCTTCAGTCTTTaGAGGACCAGTTCTCAAAAATTCAGGCTTAGTTGTCCGTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: CRFPCRADGVGIFSL*RTSSQKFRLSCPSI Trigger: GATAGACGGACAACTAAGCCTGAATTTTTGAGAACTGGTCCTCAAAAGACTGAAGATGCCTACACCATCAGCTCTGCAGGGAAACCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | TCCAAAGAGGCAAAGGTCTGGCCAGTTATTCTAGTGAGTGGTGACTaGGGAGGTAACCCACTTATGTTACTAACTAGTTCTGTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKEAKVWPVILVSGD*GGNPLMLLTSSVFR Trigger: CCTGAACACAGAACTAGTTAGTAACATAAGTGGGTTACCTCCCAAGTCACCACTCACTAGAATAACTGGCCAGACCTTTGCCTCTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS CAA 72 bp | CCCTGCAGAGCTGATGGTGTAGGCATCTTCAGTCTTTaGAGGACCAGTTCTCAAAAATTCAGGCTTAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCRADGVGIFSL*RTSSQKFRLSC Trigger: ACAACTAAGCCTGAATTTTTGAGAACTGGTCCTCAAAAGACTGAAGATGCCTACACCATCAGCTCTGCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS CAA 72 bp | GGGTATAAACGGACTCAGATGTGTCTTCAGAATGTGTaGGCATGTCAGAGGACCACTGCTGTAAATGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GYKRTQMCLQNV*ACQRTTAVNGT Trigger: AGTACCATTTACAGCAGTGGTCCTCTGACATGCCAACACATTCTGAAGACACATCTGAGTCCGTTTATACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS CAA 90 bp | ACTGCACCTGCTTTGACTTCATGGAGTGAAGCATTATTATTGCTATaGCTAGTGGATGTTCTGCCACTATCAAGGCTGGCTGGTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TAPALTSWSEALLLL*LVDVLPLSRLAGLE Trigger: TTCAAGACCAGCCAGCCTTGATAGTGGCAGAACATCCACTAGCAATAGCAATAATAATGCTTCACTCCATGAAGTCAAAGCAGGTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | TGTTGCTCCCTAGACCTGCTTTTTGAATTTCTGCTCTCTTGTACTTaGTTCACATTAGATGCTGTAGTGCTGCTGCTACCAGCAGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCSLDLLFEFLLSCT*FTLDAVVLLLPAVG Trigger: ACCTACTGCTGGTAGCAGCAGCACTACAGCATCTAATGTGAACAAAGTACAAGAGAGCAGAAATTCAAAAAGCAGGTCTAGGGAGCAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS TCA 72 bp | ACAACTTCACTTCCTGGGGAGCCAGCTTTCATCTTGTaGTGGGCTCGACTCTCTATTGTTTCAGATATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TTSLPGEPAFIL*WARLSIVSDIL Trigger: CAAAATATCTGAAACAATAGAGAGTCGAGCCCATCACAAGATGAAAGCTGGCTCCCCAGGAAGTGAAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | AAGTTGCTTCAGTTGAGTTTTCAGTGCTTGCTTCTCTaGTTGCAGCGTAGCATTTGTTTTAAGTTCGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KLLQLSFQCLLL*LQRSICFKFVA Trigger: CGCCACGAACTTAAAACAAATGCTACGCTGCAAGCAGAGAAGCAAGCACTGAAAACTCAACTGAAGCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123561.8 |
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| CDS CAA 72 bp | TTGCTTCAGTTGAGTTTTCAGTGCTTGCTTCTCTGCTaGCAGCGTAGCATTTGTTTTAAGTTCGTGGCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLQLSFQCLLLC*QRSICFKFVAQ Trigger: TTGCGCCACGAACTTAAAACAAATGCTACGCTGCAAGCAGAGAAGCAAGCACTGAAAACTCAACTGAAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123561.8 |
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| CDS CAA 72 bp | GCAAAGGTCTGGCCAGTTATTCTAGTGAGTGGTGACTaGGGAGGTAACCCACTTATGTTACTAACTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AKVWPVILVSGD*GGNPLMLLTSS Trigger: AGAACTAGTTAGTAACATAAGTGGGTTACCTCCCAAGTCACCACTCACTAGAATAACTGGCCAGACCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS TCA 72 bp | TGCAATGACACGGTCTGCCTCTGCAGTGCAAGAATCTaGGCCTGCAAATTATTATTTTGTGTTTCAAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CNDTVCLCSARI*ACKLLFCVSSC Trigger: GCAACTTGAAACACAAAATAATAATTTGCAGGCTCAGATTCTTGCACTGCAGAGGCAGACCGTGTCATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | GATTCCAAAAGTTTGTACCTACTGTCATCAGTGCTCTaGTCATCGTGTAGGAGCCGCTCTTTATTTAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: DSKSLYLLSSVL*SSCRSRSLFKP Trigger: AGGTTTAAATAAAGAGCGGCTCCTACACGATGAGCAGAGCACTGATGACAGTAGGTACAAACTTTTGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | GGTCTGCCTCTGCAGTGCAAGAATCTGAGCCTGCAAATTATTATTTaGTGTTTCAAGTTGCTTCAGTTGAGTTTTCAGTGCTTGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLPLQCKNLSLQIII*CFKLLQLSFQCLLL Trigger: GAGAAGCAAGCACTGAAAACTCAACTGAAGCAACTTGAAACACAAAATAATAATTTGCAGGCTCAGATTCTTGCACTGCAGAGGCAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | TCACACTGCTTGCACGAGGTAAAGTGGCATAAGGATTaGTATCTTTTGATTGTCTTGACACAGAGGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SHCLHEVKWHKD*YLLIVLTQRFL Trigger: AAGAAACCTCTGTGTCAAGACAATCAAAAGATAGCAATCCTTATGCCACTTTACCTCGTGCAAGCAGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | TTTGATTCCAAAAGTTTGTACCTGTCATCAGTGCTCTaGTCATCGTGTAGGAGCCGCTCTTTATTTAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: FDSKSLYLSSVL*SSCRSRSLFKP Trigger: AGGTTTAAATAAAGAGCGGCTCCTACACGATGAGCAGAGCACTGATGACAGGTACAAACTTTTGGAATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155854.8 |
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| CDS CCA 72 bp | GTGCTCCGGAGCTCTTCTACGGTTTTCGTCAGACTCTaGTTTTCCATTTCCAACTTTAATAACTTACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLRSSSTVFVRL*FSISNFNNLLD Trigger: ATCAAGTAAGTTATTAAAGTTGGAAATGGAAAACCAGAGTCTGACGAAAACCGTAGAAGAGCTCCGGAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CAA 72 bp | CTAGACCTGCTTTTTGAATTTCTGCTCTCTTGTACTTaGTTCACATTAGATGCTGTAGTGCTGCTGCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LDLLFEFLLSCT*FTLDAVVLLLP Trigger: TGGTAGCAGCAGCACTACAGCATCTAATGTGAACAAAGTACAAGAGAGCAGAAATTCAAAAAGCAGGTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040182.13 |
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| CDS TCA 72 bp | GACACCATATTCTTTAAGAGTGGTTCTATGTCTTCCTaGGACATATCTGTCACTTCCATCCATTGCAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: DTIFFKSGSMSS*DISVTSIHCRS Trigger: TGATCTGCAATGGATGGAAGTGACAGATATGTCTCAGGAAGACATAGAACCACTCTTAAAGAATATGGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | TCTTCAAGGTCTTTATGTTCCACTTCAAGATTTTTGTaGGCAGACTTCAGGGTGCCATGTTTAGAGATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSLCSTSRFL*ADFRVPCLEIR Trigger: TCTGATCTCTAAACATGGCACCCTGAAGTCTGCTCACAAAAATCTTGAAGTGGAACATAAAGACCTTGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | TTCTCTTGTTGCAGCCTCTTCAATTCCACTTCTATTTaGTCAAGTTCTTGTTTACAGTCCAGTAACTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSCCSLFNSTSI*SSSCLQSSNCS Trigger: TGAGCAGTTACTGGACTGTAAACAAGAACTTGAGCAAATAGAAGTGGAATTGAAGAGGCTGCAACAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS GCA 72 bp | TCTATTTGCTCAAGTTCTTGTTTACAGTCCAGTAACTaGTCAGTCTTTTCTTCCAATTCCTGCCTAAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SICSSSCLQSSN*SVFSSNSCLSL Trigger: AAGACTTAGGCAGGAATTGGAAGAAAAGACTGAGCAGTTACTGGACTGTAAACAAGAACTTGAGCAAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CCA 72 bp | TGTAGTTTGTCAGAACGAGCCCGAGTTCCTTCTAGTTaGTCTTCCAGCATAGTTTTTGTTTCTAATAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: CSLSERARVPSS*SSSIVFVSNKT Trigger: AGTTTTATTAGAAACAAAAACTATGCTGGAAGACCAACTAGAAGGAACTCGGGCTCGTTCTGACAAACTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CCA 72 bp | TCTAAGGAAGACTGCTGGATTAGAAGCTGTGCATTCTaGTTCATAAGTGAAGTACTTTGTGAATTAAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SKEDCWIRSCAF*FISEVLCELRV Trigger: TACCCTTAATTCACAAAGTACTTCACTTATGAACCAGAATGCACAGCTTCTAATCCAGCAGTCTTCCTTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000155854.8 ENSMUST00000239407.2 |
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| CDS CCA 72 bp | GATCGCTATCTTCAGAGAACTGTGTCTTACTGTGACTaGGGTTCTGACTATCAGAAAAATGTTTGTTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRYLQRTVSYCD*GSDYQKNVCYL Trigger: AAGATAACAAACATTTTTCTGATAGTCAGAACCCCAGTCACAGTAAGACACAGTTCTCTGAAGATAGCGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239407.2 |
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| CDS CAA 90 bp | TCACACTGCTTGCACGAGGTAAAGTGGCATAAGGATTGCTATCTTTaGATTGTCTTGACACAGAGGTTTCTTTTACTAGTTTTATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHCLHEVKWHKDCYL*IVLTQRFLLLVLSF Trigger: GAAAGATAAAACTAGTAAAAGAAACCTCTGTGTCAAGACAATCAAAAGATAGCAATCCTTATGCCACTTTACCTCGTGCAAGCAGTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | TTGGATATTAACTGCACCTGCTTTGACTTCATGGAGTaGAGCATTATTATTGCTATTGCTAGTGGATGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LDINCTCFDFME*SIIIAIASGCS Trigger: AGAACATCCACTAGCAATAGCAATAATAATGCTTCACTCCATGAAGTCAAAGCAGGTGCAGTTAATATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
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| CDS CCA 72 bp | TCTAAATTTCCTTTAAGTTGGCTGAGCAACTCACACTaGTTATTTAGCTTGGTAGATGTGATATCTAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKFPLSWLSNSH*LFSLVDVISSC Trigger: GCAACTAGATATCACATCTACCAAGCTAAATAACCAGTGTGAGTTGCTCAGCCAACTTAAAGGAAATTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS CAA 72 bp | TTGCACGAGGTAAAGTGGCATAAGGATTGCTATCTTTaGATTGTCTTGACACAGAGGTTTCTTTTACTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LHEVKWHKDCYL*IVLTQRFLLLV Trigger: AACTAGTAAAAGAAACCTCTGTGTCAAGACAATCAAAAGATAGCAATCCTTATGCCACTTTACCTCGTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS CAA 90 bp | AATTTAGCCTTTAGTTGTAAATTCTCTTTTTCTAATTCATGTAGTTaGTCAGAACGAGCCCGAGTTCCTTCTAGTTGGTCTTCCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: NLAFSCKFSFSNSCS*SERARVPSSWSSSI Trigger: TATGCTGGAAGACCAACTAGAAGGAACTCGGGCTCGTTCTGACAAACTACATGAATTAGAAAAAGAGAATTTACAACTAAAGGCTAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | TGGTTATTTAGCTTGGTAGATGTGATATCTAGTTGCTaGTACTGCTCCTTTAGCTTTGAAAATTCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WLFSLVDVISSC*YCSFSFENSAS Trigger: AGAAGCTGAATTTTCAAAGCTAAAGGAGCAGTATCAGCAACTAGATATCACATCTACCAAGCTAAATAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000239407.2 |
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| CDS TCA 72 bp | AGCAGTGTTCTGTTCTGTAGCATTAGTGTCTGGATCTaGTCAAGTAGATGTCGATTTTCTTCTTCTAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSVLFCSISVWI*SSRCRFSSSKF Trigger: AAATTTAGAAGAAGAAAATCGACATCTACTTGATCAGATCCAGACACTAATGCTACAGAACAGAACACTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040182.13 ENSMUST00000123561.8 ENSMUST00000140194.2 ENSMUST00000239407.2 |
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| CDS CAA 72 bp | TTAACTTCTTCTGTACCTTGTTCAGAAAAGGGATTTTaGCCAATGATTAAGATATCTGGCAATGGCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: LTSSVPCSEKGF*PMIKISGNGII Trigger: TATGATGCCATTGCCAGATATCTTAATCATTGGCAAAAATCCCTTTTCTGAACAAGGTACAGAAGAAGTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040182.13 ENSMUST00000239407.2 |
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