Pregenerated sensors for CCDC87 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067872Ensembl transcript IDs: ENSMUST00000088653.3
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTGTGAGCATTTGGGGGTaGGGAAGGGTTTGGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: QDIHTSVNFRALAIKDYAVSIWG*GRVWGH Trigger: GTGCCCCCAAACCCTTCCTCACCCCCAAATGCTCAC...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR CAA 90 bp | TCTATTATCACGAACTCCAAGGGATCATCTGATATAGGATTTTGGTaGTCTTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SIITNSKGSSDIGFW*SCAGWLTYMGIPSL Trigger: CAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAAGACAACCAAAATCCTATATCAGATGATCCCTTGGAGTTCGTGATAATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGTTCTACGTGAGCATTaGGGGGTGAGGAAGGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: RQDIHTSVNFRALAIKDYVLREH*GVRKGL Trigger: CAAACCCTTCCTCACCCCCAAATGCTCACGTAGAAC...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTTCTTGTGCAGGATGGTaGACATACATGGGAATACCA | + |
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Preference number: 3 (lower is better) Translates to: QDIHTSVNFRALAIKDYASCAGW*TYMGIP Trigger: TGGTATTCCCATGTATGTCAACCATCCTGCACAAGA...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTTTTAAGGACCATGGCTaGCTCTGTCTGACCTCTATT | + |
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Preference number: 3 (lower is better) Translates to: QDIHTSVNFRALAIKDYAFKDHG*LCLTSI Trigger: AATAGAGGTCAGACAGAGCAAGCCATGGTCCTTAAA...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR-3UTR CAA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTTCTCTTTTAAAGTCATaGAGAGTTCTACGTGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: IPSGFINKSCQQCVSTRSSLLKS*RVLREH Trigger: ATGCTCACGTAGAACTCTCAATGACTTTAAAAGAGA...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | AGAGTTCTACGTGAGCATTTGGGGGTGAGGAAGGGTTTGGGGGCACTTGGCCGCACCTGGACTATAACTTaGTCATGTACCTTCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVLREHLGVRKGLGALGRTWTIT*SCTFKA Trigger: TGCTTTGAAGGTACATGATCAAGTTATAGTCCAGGT...GCGGCCAAGTGCCCCCAAACCCTTCCTCACCCCCAAATGCTCACGTAGAACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | GTCTTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTCGAATCCGCCGCTGCTaGTGGAGCCAGTACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VLCRMVDIHGNTKFGDPFRIRRC*WSQYSI Trigger: GATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCG...AAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTCTTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTGGCTGCTGCTCCCTGTaGAAGTGCATGATTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: VLCRMVDIHGNTKFGDPFGCCSL*KCMIGG Trigger: TCCGCCAATCATGCACTTTCACAGGGAGCAGCAGCC...AAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTGAGGAGGCTTCGCCTTaGTGGGGAAGAGCGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIEEASP*WGRATA Trigger: CGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTC...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTCTTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTAGACTCCACCCCTCATaGAGACAAGGCATGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: VLCRMVDIHGNTKFGDPFRLHPS*RQGMDW Trigger: CCAGTCCATGCCTTGTCTTCATGAGGGGTGGAGTCT...AAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACCCAAGATCAGCGGGGTaGGGGGATGAGGAGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNPRSAG*GDEERE Trigger: CTCCCTCTCCTCATCCCCTCACCCCGCTGATCTTGG...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTGATAGCTCCGCCCCTTaGAGGTCACTGGCTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIDSSAP*RSLAPQ Trigger: TTGGGGAGCCAGTGACCTTCAAGGGGCGGAGCTATC...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACGAGGCTTCGCCTTGCTaGGGAAGAGCGACAGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNEASPC*GRATAD Trigger: GTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTC...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGAGTTTCTCTAGGTGGTaGTGGGCAGTTAGGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SYRQDIHTSVNFRALAIKSFSRW*WAVRRR Trigger: CCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACT...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTGGATTGGACAGAGCTTaGAAGTCCCAGGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIGLDRA*KSQGDR Trigger: CCTGTCCCCCTGGGACTTTCAAGCTCTGTCCAATCC...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGCCAGGAATGGACTGGTaGGGTGGGGAATTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SYRQDIHTSVNFRALAIKPGMDW*GGELVT Trigger: AGTCACCAATTCCCCACCTCACCAGTCCATTCCTGG...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACTCTAGCTCTTCATCTTaGAGCAGGGGAGGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNSSSSS*SRGGGC Trigger: GCAACCCCCTCCCCTGCTGCAAGATGAAGAGCTAGA...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTCACCTTCTCAGGGACTaGCTTCGGAGTGCTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIHLLRD*LRSACS Trigger: AGAACAAGCACTCCGAAGCCAGTCCCTGAGAAGGTG...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTGACTTACCATAAGTCATACAGGCAGGATATACATACATCTGTTAATTTCAGACCGGCTGAGGGTGGCTaGTTCAGTGAAGACCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VTYHKSYRQDIHTSVNFRPAEGG*FSEDPS Trigger: AGAAGGGTCTTCACTGAATCAGCCACCCTCAGCCGG...TCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGACTTATGGTAAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTGAGGTGGGGAATTGGTaGCTCTCACTGCTGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIEVGNW*LSLLGE Trigger: TTCTCCCAGCAGTGAGAGTCACCAATTCCCCACCTC...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGCAGTGGTTTACTCTCTaGAGCCAAGATCAGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SYRQDIHTSVNFRALAIKQWFTL*SQDQRG Trigger: ACCCCGCTGATCTTGGCTTCAGAGAGTAAACCACTG...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGTGGGTGTAGTGGGATaGTTCTCGGGGGTTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSVGVVG*FSGVGD Trigger: ATCTCCAACCCCCGAGAATCATCCCACTACACCCAC...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACCCTTCAAAGCAACAGTaGCTGGCTGTGGGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNPSKQQ*LAVGVV Trigger: CACTACACCCACAGCCAGTCACTGTTGCTTTGAAGG...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGCCTTGGGAGTAATGTaGGAGAGGGCACCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSALGVM*ERAPSQ Trigger: CTGAGAAGGTGCCCTCTCTCACATTACTCCCAAGGC...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTTGTGGTCTAAGCCAGTaGTGTGAGGCCAGGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYACGLSQ*CEARGL Trigger: CAATCCCCTGGCCTCACAGCACTGGCTTAGACCACA...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTGTGAGGCCAGGGGATTaGACAGAGCTTGAAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIVRPGD*TELESP Trigger: GGGACTTTCAAGCTCTGTCCAATCCCCTGGCCTCAC...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTAGACAAGGCATGGACTaGCCCCTTTGGAGCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIRQGMD*PLWSQE Trigger: TTCCTGGCTCCAAAGGGGCCAGTCCATGCCTTGTCT...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATCATGAAGACAAGGCATaGACTGGCCCCTTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQDIHTSVNFRALAIKDYHEDKA*TGPFGA Trigger: GGCTCCAAAGGGGCCAGTCCATGCCTTGTCTTCATG...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTTGGCGGAAGGTTTTCTaGGCCTGGGTCAGATTGCGA | + |
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Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYAWRKVF*AWVRLR Trigger: TCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCA...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTTCACTGCTGGGAGAATaGCTAGGCAGTGGTACCATC | + |
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Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSSLLGE*LGSGTI Trigger: GATGGTACCACTGCCTAGTCATTCTCCCAGCAGTGA...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTCCTGCTCCCAAGCCTTaGTCAATGCTGGTAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSPAPKP*SMLVAV Trigger: AACAGCTACCAGCATTGATCAAGGCTTGGGAGCAGG...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATAAGGCACAACTCATCTaGCAGACTCCACCCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: RQDIHTSVNFRALAIKDYKAQLI*QTPPLM Trigger: CATGAGGGGTGGAGTCTGGCAGATGAGTTGTGCCTT...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTCTTTATCCTTTATCATaGAGGGCACCCAGAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFILYPLS*RAPRGA Trigger: AGCTCCTCTGGGTGCCCTCCATGATAAAGGATAAAG...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTCTTTGGAGCCAGGAATaGACTGGTGAGGTGGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYALWSQE*TGEVGN Trigger: ATTCCCCACCTCACCAGTCCATTCCTGGCTCCAAAG...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTGACTTACCATAAGTCATACAGGCAGGATATACATACATCTGTTAATTTCAGAAGAGCTGCTCACTACTaGTCAGCACGTAGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: VTYHKSYRQDIHTSVNFRRAAHY*SARRTR Trigger: TCGAGTCCTACGTGCTGATCAGTAGTGAGCAGCTCT...TCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGACTTATGGTAAGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ACAAGAGTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTACATACATTTGGAAGATaGCGTGGAGGAAATCCGACT | + |
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Preference number: 4 (lower is better) Translates to: TRVIWHSKQQFSTVRKSLHTFGR*RGGNPT Trigger: AGTCGGATTTCCTCCACGTCATCTTCCAAATGTATG...TAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCACTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTATGGGCTTCAGGACCTaGTCCCAAGCCTTGATCAAT | + |
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Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYAMGFRT*SQALIN Trigger: ATTGATCAAGGCTTGGGAGCAGGTCCTGAAGCCCAT...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGTTTCAACTCTTCCACTaGATCAGGTTCGGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: SYRQDIHTSVNFRALAIKFQLFH*IRFGLT Trigger: AGTGAGCCCGAACCTGATCCAGTGGAAGAGTTGAAA...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR CAA 72 bp | TCTGATATAGGATTTTGGTTGTCTTGTGCAGGATGGTaGACATACATGGGAATACCAAGTTTGGGGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: SDIGFWLSCAGW*TYMGIPSLGIL Trigger: AAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAAGACAACCAAAATCCTATATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| 3UTR CAA 72 bp | ACGAACTCCAAGGGATCATCTGATATAGGATTTTGGTaGTCTTGTGCAGGATGGTTGACATACATGGGAATA | + |
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Preference number: 4 (lower is better) Translates to: TNSKGSSDIGFW*SCAGWLTYMGI Trigger: TATTCCCATGTATGTCAACCATCCTGCACAAGACAACCAAAATCCTATATCAGATGATCCCTTGGAGTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGTCCTCAAAAGATAAGTaGCTAACAGAGACTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SYRQDIHTSVNFRALAIKSSKDK*LTETRL Trigger: GAGCCGAGTCTCTGTTAGTCACTTATCTTTTGAGGA...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTTGGCTCCCCAAAGACTaGCTCTATCCTTTCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIWLPKD*LYPFQQ Trigger: TTGTTGGAAAGGATAGAGTCAGTCTTTGGGGAGCCA...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGAGGCTTCTTCCTCCTaGAGGCTTTTGATCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: RQDIHTSVNFRALAIKDYEASSS*RLLIIC Trigger: GCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTC...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTGGATCAGAGGCTTGTTaGTCAAACCACTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VIWHSKQQFSTVRKSLYIGSEAC*SNHSSL Trigger: AAGACTGGAGTGGTTTGAGCAACAAGCCTCTGATCC...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACTGTCTACTCTTCAGCTaGGGGATGGATTTCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNCLLFS*GMDFNS Trigger: AGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACA...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTATGATCTTCATTTTCTaGTTCAGATCCTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIMIFIF*FRSSAT Trigger: AGTGGCTGAGGATCTGAAGCAGAAAATGAAGATCAT...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACGCTGAAGGCTCAATTTaGTCTCCTTCCTCAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNAEGSI*SPSSKD Trigger: ATCTTTTGAGGAAGGAGACCAAATTGAGCCTTCAGC...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTGAGTGCTTGTTCTTCTaGAGTAAAATCCAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIECLFF*SKIQPD Trigger: ATCTGGTTGGATTTTACTCCAGAAGAACAAGCACTC...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGACAACTCCACTCCATTCTCATaGTCTTCATTTTCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGFINKSCQQCVSTRSDNSTPFS*SSFSAS Trigger: TGAAGCAGAAAATGAAGATCATGAGAATGGAGTGGA...GTTGTCACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR TCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTCCCATTTTCCTTGCATaGACTCTAGCTCTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSPIFLA*TLALHL Trigger: AAGATGAAGAGCTAGAGTTCATGCAAGGAAAATGGG...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTTATCTTTCAGAGAGTTaGACAGTAGCTACCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSYLSES*TVATWT Trigger: AGTCCAGGTAGCTACTGTGCAACTCTCTGAAAGATA...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTCATCCATTTCTTCAATaGCTTTACCATCCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSGFINKSCQQCVSTRSHPFLQ*LYHPVP Trigger: GGGAACTGGATGGTAAAGCCATTGAAGAAATGGATG...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTTTTGGAAGAAACGATTaGGATCAGAGGCTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYAFGRND*DQRLVA Trigger: AGCAACAAGCCTCTGATCCCAATCGTTTCTTCCAAA...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | ACAAGAGTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTAAACAAATCAGGCTTTTaGAAGAAACGATTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVIWHSKQQFSTVRKSLNKSGF*KKRLGS Trigger: TGATCCCAATCGTTTCTTCCAAAAGCCTGATTTGTT...TAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCACTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTTCTTTTTCATACATTTaGAAGATGACGTGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCRMVDIHGNTKFGDPFISFSYI*KMTWRK Trigger: TTTCCTCCACGTCATCTTCCAAATGTATGAAAAAGA...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR GCA 90 bp | GTGACTTACCATAAGTCATACAGGCAGGATATACATACATCTGTTAATTTCAGACAATCCCATTTTCCTTaGATGAACTCTAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTYHKSYRQDIHTSVNFRQSHFP*MNSSSS Trigger: TGAAGAGCTAGAGTTCATGCAAGGAAAATGGGATTG...TCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGACTTATGGTAAGTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CCA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTATTACGGTTGATGATTaGCATATGTTTATCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDIHTSVNFRALAIKDYAITVDD*HMFILV Trigger: CACCAAGATAAACATATGCCAATCATCAACCGTAAT...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | CCTTGGCAGTTACTCGTGCCGCCCGCCCGCTGCTTGCTAGCCGCTTaGACACTTGGCGGCACAGCGGCCCAACTTTCAGCTTCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PWQLLVPPARCLLAA*TLGGTAAQLSASPA Trigger: CGCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCCGCCAAGTGTCCAAGCGGCTAGCAAGCAGCGGGCGGGCGGCACGAGTAACTGCCAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | GTTACTCGTGCCGCCCGCCCGCTGCTTGCTAGCCGCTTGGACACTTaGCGGCACAGCGGCCCAACTTTCAGCTTCGCCAGCGGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTRAARPLLASRLDT*RHSGPTFSFASGMD Trigger: ATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCCGCCAAGTGTCCAAGCGGCTAGCAAGCAGCGGGCGGGCGGCACGAGTAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | GGATTGCAAGGGCGTGGCATCTTGAGAGGGGCGCTTCGGAGGCTCTaGAGGAGGCTTCGCCTTGCTGGGGAAGAGCGACAGCGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLQGRGILRGALRRL*RRLRLAGEERQRTQ Trigger: CTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | GCGGCCCAACTTTCAGCTTCGCCAGCGGGATGGATTGCAAGGGCGTaGCATCTTGAGAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AAQLSASPAGWIARA*HLERGASEALEEAS Trigger: CGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | CTTGAGAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTGCTaGGGAAGAGCGACAGCGGACTCAGCAACCGGTGGTAAATCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LERGASEALEEASPC*GRATADSATGGKSA Trigger: AGCCGATTTACCACCGGTTGCTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | ACACTTGGCGGCACAGCGGCCCAACTTTCAGCTTCGCCAGCGGGATaGATTGCAAGGGCGTGGCATCTTGAGAGGGGCGCTTCGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLGGTAAQLSASPAG*IARAWHLERGASEA Trigger: AGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCCGCCAAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | ACTTTCAGCTTCGCCAGCGGGATGGATTGCAAGGGCGTGGCATCTTaGGAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFSFASGMDCKGVAS*EGRFGGSGGGFALL Trigger: CAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | CATCTTGAGAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTaGTGGGGAAGAGCGACAGCGGACTCAGCAACCGGTGGTAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: HLERGASEALEEASP*WGRATADSATGGKS Trigger: CGATTTACCACCGGTTGCTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | GGGTCACCAGCAGGTGCAGGTAGCGTACGAAGAGCTGCTCACTACTaGTCAGCACGTAGGACTCGAGCCGCTGCCGCAGCTTCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSPAGAGSVRRAAHY*SARRTRAAAAASGC Trigger: ACAACCAGAAGCTGCGGCAGCGGCTCGAGTCCTACGTGCTGATCAGTAGTGAGCAGCTCTTCGTACGCTACCTGCACCTGCTGGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | CTGCTCCCTGTGAAAGTGCATGATTGGCGGAAGGTTTTCTGGGCCTaGGTCAGATTGCGAATCCGCCGCTGCTGCTGGAGCCAGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPVKVHDWRKVFWA*VRLRIRRCCWSQYS Trigger: GCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCAATCATGCACTTTCACAGGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | TGTGCAATCCCTGGCAAGGTTTACTGCCAACCGGCTGAGGGTGGCTaGTTCAGTGAAGACCCTTCTAGAGGTCGGCAGGGTCACCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: CAIPGKVYCQPAEGG*FSEDPSRGRQGHQQ Trigger: CTGCTGGTGACCCTGCCGACCTCTAGAAGGGTCTTCACTGAATCAGCCACCCTCAGCCGGTTGGCAGTAAACCTTGCCAGGGATTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | TTCAGGTTGAGGCTAGAGCACGGCATGTGGTCTAAGCCAGTGCTGTaGGGCCAGGGGATTGGACAGAGCTTGAAAGTCCCAGGGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: FRLRLEHGMWSKPVL*GQGIGQSLKVPGGQ Trigger: CTGTCCCCCTGGGACTTTCAAGCTCTGTCCAATCCCCTGGCCTCACAGCACTGGCTTAGACCACATGCCGTGCTCTAGCCTCAACCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | TGGCGGAAGGTTTTCTGGGCCTGGGTCAGATTGCGAATCCGCCGCTaGTGCTGGAGCCAGTACAGCATCTCCACTTTGTCCTGCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: WRKVFWAWVRLRIRR*CWSQYSISTLSCFI Trigger: GATGAAGCAGGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | TGGAGGGCACCCAGAGGAGCTGCTGTCTACTCTTCAGCTGGGGGATaGATTTCAACTCTTCCACTGGATCAGGTTCGGGCTCACTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRAPRGAAVYSSAGG*ISTLPLDQVRAHWG Trigger: TCCCCAGTGAGCCCGAACCTGATCCAGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAGCTCCTCTGGGTGCCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTCTACGTGAGCATTTGGGGGTGAGGAAGGGTTTGGGGGCACTTGGCCGCGGAGGTTCCCGCCAGTaGCACTTCAGCTCTTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: RVLREHLGVRKGLGALGRGGSRQ*HFSSSR Trigger: TCTAGAAGAGCTGAAGTGCAACTGGCGGGAACCTCC...GCGGCCAAGTGCCCCCAAACCCTTCCTCACCCCCAAATGCTCACGTAGAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | CAGATCCTCAGCCACTATGTCCCGGAATGGCAGTGGTTTACTCTCTaGAGCCAAGATCAGCGGGGTGAGGGGATGAGGAGAGGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QILSHYVPEWQWFTL*SQDQRGEGMRRGRK Trigger: CTTCCTCCCTCTCCTCATCCCCTCACCCCGCTGATCTTGGCTTCAGAGAGTAAACCACTGCCATTCCGGGACATAGTGGCTGAGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | CGGAAGGTTTTCTGGGCCTGGGTCAGATTGCGAATCCGCCGCTGCTaGTGGAGCCAGTACAGCATCTCCACTTTGTCCTGCTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKVFWAWVRLRIRRC*WSQYSISTLSCFIF Trigger: GAAGATGAAGCAGGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | GCAACAGTGACTGGCTGTGGGTGTAGTGGGATGATTCTCGGGGGTTaGAGATCCCACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATVTGCGCSGMILGG*RSHFPEASSSCRLL Trigger: CAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTGGGATCTCCAACCCCCGAGAATCATCCCACTACACCCACAGCCAGTCACTGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | CACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTTGATCATTTGCTaGAGTTTCTCTAGGTGGTGCTGGGCAGTTAGGCGCCGGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFPEASSSCRLLIIC*SFSRWCWAVRRRVR Trigger: CCTTACCCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | TCCCACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTTGATCATTTaGTGCAGTTTCTCTAGGTGGTGCTGGGCAGTTAGGCGCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHFPEASSSCRLLII*CSFSRWCWAVRRRV Trigger: TACCCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | GTCTGTTTGGTCGCTTGTCCCAGCTTTTGTGCCTTGGGAGTAATGTaGGAGAGGGCACCTTCTCAGGGACTGGCTTCGGAGTGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCLVACPSFCALGVM*ERAPSQGLASECLF Trigger: GAACAAGCACTCCGAAGCCAGTCCCTGAGAAGGTGCCCTCTCTCACATTACTCCCAAGGCACAAAAGCTGGGACAAGCGACCAAACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | CTGCTGTCTACTCTTCAGCTGGGGGATGGATTTCAACTCTTCCACTaGATCAGGTTCGGGCTCACTGGGGAAATCATATGGGCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSTLQLGDGFQLFH*IRFGLTGEIIWAAE Trigger: CTCAGCCGCCCATATGATTTCCCCAGTGAGCCCGAACCTGATCCAGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | AAGGTTTTCTGGGCCTGGGTCAGATTGCGAATCCGCCGCTGCTGCTaGAGCCAGTACAGCATCTCCACTTTGTCCTGCTTCATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KVFWAWVRLRIRRCC*SQYSISTLSCFIFF Trigger: GAAGAAGATGAAGCAGGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | GTTGGAGATCCCACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTTaGTCATTTGCTGCAGTTTCTCTAGGTGGTGCTGGGCAGTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGDPTFRRLLPPAGF*SFAAVSLGGAGQLG Trigger: GCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTGGGATCTCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | ACGACTCCCTCTTTTGAATGGGCTTCAGGACCTGCTCCCAAGCCTTaGTCAATGCTGGTAGCTGTTGCAGGCGTGCATTGGAGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TTPSFEWASGPAPKP*SMLVAVAGVHWSCI Trigger: AATACAGCTCCAATGCACGCCTGCAACAGCTACCAGCATTGATCAAGGCTTGGGAGCAGGTCCTGAAGCCCATTCAAAAGAGGGAGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | TGTTGCTCAAACCACTCCAGTCTTCCTAGCAACGACTCCCTCTTTTaGATGGGCTTCAGGACCTGCTCCCAAGCCTTGATCAATGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCSNHSSLPSNDSLF*MGFRTCSQALINAG Trigger: ACCAGCATTGATCAAGGCTTGGGAGCAGGTCCTGAAGCCCATTCAAAAGAGGGAGTCGTTGCTAGGAAGACTGGAGTGGTTTGAGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | TCTCCACTTTGTCCTGCTTCATCTTCTTCAGATAGCTCCGCCCCTTaGAGGTCACTGGCTCCCCAAAGACTGACTCTATCCTTTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SPLCPASSSSDSSAP*RSLAPQRLTLSFPT Trigger: TGTTGGAAAGGATAGAGTCAGTCTTTGGGGAGCCAGTGACCTTCAAGGGGCGGAGCTATCTGAAGAAGATGAAGCAGGACAAAGTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 90 bp | GAGGAAATCCGACTCCTGAAAGGAGAGGTACTTGAAGTAGTCCTCTaGAGACACCGAGGGTTTCAGCCAATTCATCCATACACCGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EEIRLLKGEVLEVVL*RHRGFQPIHPYTVS Trigger: AGACACGGTGTATGGATGAATTGGCTGAAACCCTCGGTGTCTTCAGAGGACTACTTCAAGTACCTCTCCTTTCAGGAGTCGGATTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | GCATCCATTTCTTCAATGGCTTTACCATCCAGTTCCCCAGTCAGATaGTTGTATAGGACTCCAGCCCCCTCAACGTGGAAAGAGTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASISSMALPSSSPVR*LYRTPAPSTWKESL Trigger: TAACGACTCTTTCCACGTTGAGGGGGCTGGAGTCCTATACAACCATCTGACTGGGGAACTGGATGGTAAAGCCATTGAAGAAATGGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CAA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTCATGGACTGGCCCCTTaGGAGCCAGGAATGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIHGLAP*EPGMDW Trigger: CCAGTCCATTCCTGGCTCCAAAGGGGCCAGTCCATG...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | AGCAGGGAGTATCGACTCCACTCCATTCTCATGATCTTCATTTTCTaGTTCAGATCCTCAGCCACTATGTCCCGGAATGGCAGTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SREYRLHSILMIFIF*FRSSATMSRNGSGL Trigger: TAAACCACTGCCATTCCGGGACATAGTGGCTGAGGATCTGAAGCAGAAAATGAAGATCATGAGAATGGAGTGGAGTCGATACTCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 90 bp | GATTCAATTTCTTTATCCTTTATCATGGAGGGCACCCAGAGGAGCTaGTGTCTACTCTTCAGCTGGGGGATGGATTTCAACTCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DSISLSFIMEGTQRS*CLLFSWGMDFNSST Trigger: AGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAGCTCCTCTGGGTGCCCTCCATGATAAAGGATAAAGAAATTGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 90 bp | CCAGTAACCGATTCATCAACAAATCAGGCTTTTGGAAGAAACGATTaGGATCAGAGGCTTGTTGCTCAAACCACTCCAGTCTTCCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVTDSSTNQAFGRND*DQRLVAQTTPVFLA Trigger: TGCTAGGAAGACTGGAGTGGTTTGAGCAACAAGCCTCTGATCCCAATCGTTTCTTCCAAAAGCCTGATTTGTTGATGAATCGGTTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CAA 90 bp | TTGTGCAGGATGGTTGACATACATGGGAATACCAAGTTTGGGGATCCTTTTATTGGGATCAGAGGCTTGTaGCTCAAACCACTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCRMVDIHGNTKFGDPFIGIRGL*LKPLQS Trigger: AGACTGGAGTGGTTTGAGCAACAAGCCTCTGATCCC...AATAAAAGGATCCCCAAACTTGGTATTCCCATGTATGTCAACCATCCTGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS-3UTR CAA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTGATGATTCTCGGGGGTaGGAGATCCCACTTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPSGFINKSCQQCVSTRSDDSRG*EIPLSG Trigger: TCCGGAAAGTGGGATCTCCAACCCCCGAGAATCATC...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTCAACGACTCCCTCTTTaGAATGGGCTTCAGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDIHTSVNFRALAIKDYAQRLPL*NGLQDL Trigger: CAGGTCCTGAAGCCCATTCAAAAGAGGGAGTCGTTG...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | CAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATGCTATATGGGCGGCTGAGTaGGACAAGGTAGTTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDIHTSVNFRALAIKDYAIWAAE*DKVVQV Trigger: AACCTGAACTACCTTGTCCAACTCAGCCGCCCATAT...AGCATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | GTGATTTGGCACTCTAAACAGCAATTCAGCACAGTGAGAAAGTCACTATATATTTGTCTGTTTGGTCGCTaGTCCCAGCTTTTGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VIWHSKQQFSTVRKSLYICLFGR*SQLLCL Trigger: AAGGCACAAAAGCTGGGACAAGCGACCAAACAGACA...AATATATAGTGACTTTCTCACTGTGCTGAATTGCTGTTTAGAGTGCCAAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATTCGATTGAGCTTCCTTaGGAGATAGCTACGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: RQDIHTSVNFRALAIKDYSIELP*EIATEP Trigger: CGGTTCCGTAGCTATCTCCAAAGGAAGCTCAATCGA...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | ATACCAAGTGGTTTTATTAACAAGTCCTGCCAACAATGTGTAAGCACTAGAAGTTCCTCCTGCAGGCTTTaGATCATTTGCTGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPSGFINKSCQQCVSTRSSSCRL*IICCSF Trigger: GAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGA...ACTTCTAGTGCTTACACATTGTTGGCAGGACTTGTTAATAAAACCACTTGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTTACCATAAGTCATACAGGCAGGATATACATACATCTGTTAATTTCAGACTGGCTTCGGAGTGCTaGTTCTTCTGGAGTAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VTYHKSYRQDIHTSVNFRLASEC*FFWSKI Trigger: GATTTTACTCCAGAAGAACAAGCACTCCGAAGCCAG...TCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGACTTATGGTAAGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGCAACAAATCAGGCTTTaGGAAGAAACGATTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SYRQDIHTSVNFRALAIKQQIRL*EETIGI Trigger: GATCCCAATCGTTTCTTCCAAAAGCCTGATTTGTTG...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGGATTATTACAGCATCTCCACTTaGTCCTGCTTCATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQDIHTSVNFRALAIKDYYSIST*SCFIFF Trigger: GAAGAAGATGAAGCAGGACAAAGTGGAGATGCTGTA...ATAATCCTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | TCATACAGGCAGGATATACATACATCTGTTAATTTCAGAGCCCTAGCAATCAAGCCAACCAGATTACGGTaGATGATTGGCATATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SYRQDIHTSVNFRALAIKPTRLR*MIGICL Trigger: TAAACATATGCCAATCATCAACCGTAATCTGGTTGG...CTTGATTGCTAGGGCTCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTTACCATAAGTCATACAGGCAGGATATACATACATCTGTTAATTTCAGATGTTGCAGGCGTGCATaGGAGCTGTATTTAATAACC | + |
|
Preference number: 5 (lower is better) Translates to: VTYHKSYRQDIHTSVNFRCCRRA*ELYLIT Trigger: GGTTATTAAATACAGCTCCAATGCACGCCTGCAACA...TCTGAAATTAACAGATGTATGTATATCCTGCCTGTATGACTTATGGTAAGTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | GAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTaGCTGGGGAAGAGCGACAGCGGACTCAGCAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: EGRFGGSGGGFA*LGKSDSGLSNR Trigger: CCGGTTGCTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | AGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTaGTGGGGAAGAGCGACAGCGGACTCAGCAACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGASEALEEASP*WGRATADSATG Trigger: ACCGGTTGCTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | GGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTGCTaGGGAAGAGCGACAGCGGACTCAGCAACCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GASEALEEASPC*GRATADSATGG Trigger: ACCACCGGTTGCTGAGTCCGCTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | GGGCGTGGCATCTTGAGAGGGGCGCTTCGGAGGCTCTaGAGGAGGCTTCGCCTTGCTGGGGAAGAGCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGILRGALRRL*RRLRLAGEERQ Trigger: CTGTCGCTCTTCCCCAGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | TCCTTGGCAGTTACTCGTGCCGCCCGCCCGCTGCTTGCTAGCCGCTaGGACACTTGGCGGCACAGCGGCCCAACTTTCAGCTTCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLAVTRAARPLLASR*DTWRHSGPTFSFAS Trigger: GCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCCGCCAAGTGTCCAAGCGGCTAGCAAGCAGCGGGCGGGCGGCACGAGTAACTGCCAAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | TTGGCGGCACAGCGGCCCAACTTTCAGCTTCGCCAGCGGGATGGATaGCAAGGGCGTGGCATCTTGAGAGGGGCGCTTCGGAGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAAQRPNFQLRQRDG*QGRGILRGALRRLW Trigger: CCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | GGCACAGCGGCCCAACTTTCAGCTTCGCCAGCGGGATaGATTGCAAGGGCGTGGCATCTTGAGAGGGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTAAQLSASPAG*IARAWHLERGA Trigger: AGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGCTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | CAGCGGCCCAACTTTCAGCTTCGCCAGCGGGATGGATaGCAAGGGCGTGGCATCTTGAGAGGGGCGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QRPNFQLRQRDG*QGRGILRGALR Trigger: CCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTTGGGCCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | CTTTCAGCTTCGCCAGCGGGATGGATTGCAAGGGCGTaGCATCTTGAGAGGGGCGCTTCGGAGGCTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSASPAGWIARA*HLERGASEALE Trigger: CTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | AACTTTCAGCTTCGCCAGCGGGATGGATTGCAAGGGCGTGGCATCTaGAGAGGGGCGCTTCGGAGGCTCTGGAGGAGGCTTCGCCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NFQLRQRDGLQGRGI*RGALRRLWRRLRLA Trigger: AGCAAGGCGAAGCCTCCTCCAGAGCCTCCGAAGCGCCCCTCTCAAGATGCCACGCCCTTGCAATCCATCCCGCTGGCGAAGCTGAAAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | GCAGGTGCAGGTAGCGTACGAAGAGCTGCTCACTACTaGTCAGCACGTAGGACTCGAGCCGCTGCCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGAGSVRRAAHY*SARRTRAAAAA Trigger: AGCTGCGGCAGCGGCTCGAGTCCTACGTGCTGATCAGTAGTGAGCAGCTCTTCGTACGCTACCTGCACCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | TCCCGGGGGCCACTAACGCCTGGCTGCTGCTCCCTGTaGAAGTGCATGATTGGCGGAAGGTTTTCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRGPLTPGCCSL*KCMIGGRFSGP Trigger: AGGCCCAGAAAACCTTCCGCCAATCATGCACTTTCACAGGGAGCAGCAGCCAGGCGTTAGTGGCCCCCGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | TTCTGGGCCTGGGTCAGATTGCGAATCCGCCGCTGCTaGTGGAGCCAGTACAGCATCTCCACTTTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FWAWVRLRIRRC*WSQYSISTLSC Trigger: GCAGGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | TGGGCCTGGGTCAGATTGCGAATCCGCCGCTGCTGCTaGAGCCAGTACAGCATCTCCACTTTGTCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WAWVRLRIRRCC*SQYSISTLSCF Trigger: GAAGCAGGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | CATGATTGGCGGAAGGTTTTCTGGGCCTGGGTCAGATaGCGAATCCGCCGCTGCTGCTGGAGCCAGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HDWRKVFWAWVR*RIRRCCWSQYS Trigger: GCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCAATCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | CACTTCAGCTCTTCTAGAATAACCTCAGTGAGACGAAGTCGGTCCTaGGCAGTTACTCGTGCCGCCCGCCCGCTGCTTGCTAGCCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HFSSSRITSVRRSRS*AVTRAARPLLASRL Trigger: CAAGCGGCTAGCAAGCAGCGGGCGGGCGGCACGAGTAACTGCCAAGGACCGACTTCGTCTCACTGAGGTTATTCTAGAAGAGCTGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | CCTGGCAAGGTTTACTGCCAACCGGCTGAGGGTGGCTaGTTCAGTGAAGACCCTTCTAGAGGTCGGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGKVYCQPAEGG*FSEDPSRGRQG Trigger: ACCCTGCCGACCTCTAGAAGGGTCTTCACTGAATCAGCCACCCTCAGCCGGTTGGCAGTAAACCTTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | GTTTTCTGGGCCTGGGTCAGATTGCGAATCCGCCGCTaGTGCTGGAGCCAGTACAGCATCTCCACTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VFWAWVRLRIRR*CWSQYSISTLS Trigger: GGACAAAGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | ATGATTGGCGGAAGGTTTTCTGGGCCTGGGTCAGATTaGGAATCCGCCGCTGCTGCTGGAGCCAGTACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MIGGRFSGPGSD*ESAAAAGASTA Trigger: TGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCAATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | CATCTGCCAGACTCCACCCCTCATGAAGACAAGGCATaGACTGGCCCCTTTGGAGCCAGGAATGGACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLPDSTPHEDKA*TGPFGARNGLV Trigger: CACCAGTCCATTCCTGGCTCCAAAGGGGCCAGTCCATGCCTTGTCTTCATGAGGGGTGGAGTCTGGCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | GTGAAAGTGCATGATTGGCGGAAGGTTTTCTGGGCCTaGGTCAGATTGCGAATCCGCCGCTGCTGCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKVHDWRKVFWA*VRLRIRRCCWS Trigger: GCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCAATCATGCACTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | GTGAAAGTGCATGATTGGCGGAAGGTTTTCTGGGCCTGGGTCAGATaGCGAATCCGCCGCTGCTGCTGGAGCCAGTACAGCATCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VKVHDWRKVFWAWVR*RIRRCCWSQYSIST Trigger: AGTGGAGATGCTGTACTGGCTCCAGCAGCAGCGGCGGATTCGCAATCTGACCCAGGCCCAGAAAACCTTCCGCCAATCATGCACTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | AGGCTTTTGATCATTTGCTGCAGTTTCTCTAGGTGGTaGTGGGCAGTTAGGCGCCGGGTAAGGACCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLIICCSFSRW*WAVRRRVRTPR Trigger: CCTCGGGGTCCTTACCCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | ACTGGCCCCTTTGGAGCCAGGAATGGACTGGTGAGGTaGGGAATTGGTGACTCTCACTGCTGGGAGAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGPFGARNGLVR*GIGDSHCWEND Trigger: GTCATTCTCCCAGCAGTGAGAGTCACCAATTCCCCACCTCACCAGTCCATTCCTGGCTCCAAAGGGGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | CTTTTGATCATTTGCTGCAGTTTCTCTAGGTGGTGCTaGGCAGTTAGGCGCCGGGTAAGGACCCCGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLIICCSFSRWC*AVRRRVRTPRR Trigger: CCTCCTCGGGGTCCTTACCCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | TGCAGGCTTTTGATCATTTGCTGCAGTTTCTCTAGGTaGTGCTGGGCAGTTAGGCGCCGGGTAAGGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CRLLIICCSFSR*CWAVRRRVRTP Trigger: CGGGGTCCTTACCCGGCGCCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | TGGATCAGGTTCGGGCTCACTGGGGAAATCATATGGGCGGCTGAGTaGGACAAGGTAGTTCAGGTTGAGGCTAGAGCACGGCATGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WIRFGLTGEIIWAAE*DKVVQVEARARHVV Trigger: GACCACATGCCGTGCTCTAGCCTCAACCTGAACTACCTTGTCCAACTCAGCCGCCCATATGATTTCCCCAGTGAGCCCGAACCTGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS GCA 72 bp | GGGATGAGGAGAGGGAGGAAGAAGGCACAACTCATCTaGCAGACTCCACCCCTCATGAAGACAAGGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GMRRGRKKAQLI*QTPPLMKTRHG Trigger: TCCATGCCTTGTCTTCATGAGGGGTGGAGTCTGGCAGATGAGTTGTGCCTTCTTCCTCCCTCTCCTCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | CCCAGAGGAGCTGCTGTCTACTCTTCAGCTGGGGGATaGATTTCAACTCTTCCACTGGATCAGGTTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRGAAVYSSAGG*ISTLPLDQVRA Trigger: AGCCCGAACCTGATCCAGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAGCTCCTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CCA 72 bp | GAGGGCACCCAGAGGAGCTGCTGTCTACTCTTCAGCTaGGGGATGGATTTCAACTCTTCCACTGGATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: EGTQRSCCLLFS*GMDFNSSTGSG Trigger: ACCTGATCCAGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAGCTCCTCTGGGTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | TTCGGGCTCACTGGGGAAATCATATGGGCGGCTGAGTaGGACAAGGTAGTTCAGGTTGAGGCTAGAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: FGLTGEIIWAAE*DKVVQVEARAR Trigger: CCGTGCTCTAGCCTCAACCTGAACTACCTTGTCCAACTCAGCCGCCCATATGATTTCCCCAGTGAGCCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | GGTTGGAGATCCCACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTaGATCATTTGCTGCAGTTTCTCTAGGTGGTGCTGGGCAGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GWRSHFPEASSSCRL*IICCSFSRWCWAVR Trigger: CCTAACTGCCCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTGGGATCTCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | TCTAGCTCTTCATCTTGCAGCAGGGGAGGGGGTTGCTaGATATCTAGGTACTCTTGGACAGGGACTGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSCSRGGGC*ISRYSWTGTGT Trigger: GGTACCAGTCCCTGTCCAAGAGTACCTAGATATTCAGCAACCCCCTCCCCTGCTGCAAGATGAAGAGCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | TCTTTTGAATGGGCTTCAGGACCTGCTCCCAAGCCTTaGTCAATGCTGGTAGCTGTTGCAGGCGTGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFEWASGPAPKP*SMLVAVAGVHW Trigger: CCAATGCACGCCTGCAACAGCTACCAGCATTGATCAAGGCTTGGGAGCAGGTCCTGAAGCCCATTCAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | AACCACTCCAGTCTTCCTAGCAACGACTCCCTCTTTTaGATGGGCTTCAGGACCTGCTCCCAAGCCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: NHSSLPSNDSLF*MGFRTCSQALI Trigger: GATCAAGGCTTGGGAGCAGGTCCTGAAGCCCATTCAAAAGAGGGAGTCGTTGCTAGGAAGACTGGAGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS TCA 72 bp | TGTCCTGCTTCATCTTCTTCAGATAGCTCCGCCCCTTaGAGGTCACTGGCTCCCCAAAGACTGACTCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: CPASSSSDSSAP*RSLAPQRLTLS Trigger: GGATAGAGTCAGTCTTTGGGGAGCCAGTGACCTTCAAGGGGCGGAGCTATCTGAAGAAGATGAAGCAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | TTGAAAGTCCCAGGGGGACAGGGAGGAGGACGCAATTaGACTATGCCTCCCTGGGCGTGCTTTAAATTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKVPGGQGGGRN*TMPPWACFKFS Trigger: GCTAAATTTAAAGCACGCCCAGGGAGGCATAGTCAAATTGCGTCCTCCTCCCTGTCCCCCTGGGACTTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 72 bp | TCCCACTTTCCGGAGGCTTCTTCCTCCTGCAGGCTTTaGATCATTTGCTGCAGTTTCTCTAGGTGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SHFPEASSSCRL*IICCSFSRWCW Trigger: CCAGCACCACCTAGAGAAACTGCAGCAAATGATCAAAAGCCTGCAGGAGGAAGAAGCCTCCGGAAAGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
||
| CDS CAA 90 bp | GAGGGTTTCAGCCAATTCATCCATACACCGTGTCTGTTTGGTCGCTaGTCCCAGCTTTTGTGCCTTGGGAGTAATGTGAGAGAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: EGFSQFIHTPCLFGR*SQLLCLGSNVREGT Trigger: GGTGCCCTCTCTCACATTACTCCCAAGGCACAAAAGCTGGGACAAGCGACCAAACAGACACGGTGTATGGATGAATTGGCTGAAACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 90 bp | CAATTCATCCATACACCGTGTCTGTTTGGTCGCTTGTCCCAGCTTTaGTGCCTTGGGAGTAATGTGAGAGAGGGCACCTTCTCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: QFIHTPCLFGRLSQL*CLGSNVREGTFSGT Trigger: AGTCCCTGAGAAGGTGCCCTCTCTCACATTACTCCCAAGGCACAAAAGCTGGGACAAGCGACCAAACAGACACGGTGTATGGATGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 72 bp | CCTCTATCACTGAGCTCCAATCCCATTTTCCTTGCATaGACTCTAGCTCTTCATCTTGCAGCAGGGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PLSLSSNPIFLA*TLALHLAAGEG Trigger: CCCCTCCCCTGCTGCAAGATGAAGAGCTAGAGTTCATGCAAGGAAAATGGGATTGGAGCTCAGTGATAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 72 bp | ACTCTTCAGCTGGGGGATGGATTTCAACTCTTCCACTaGATCAGGTTCGGGCTCACTGGGGAAATCATATGG | + |
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Preference number: 6 (lower is better) Translates to: TLQLGDGFQLFH*IRFGLTGEIIW Trigger: CCATATGATTTCCCCAGTGAGCCCGAACCTGATCCAGTGGAAGAGTTGAAATCCATCCCCCAGCTGAAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 72 bp | AGACTCGGCTCATCAACTCCTTGTAGACCTCTCCGGTaGTGTTCCCAACAAGACGATCCGCATCCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLGSSTPCRPLR*CSQQDDPHPFL Trigger: AAGAAATGGATGCGGATCGTCTTGTTGGGAACACCACCGGAGAGGTCTACAAGGAGTTGATGAGCCGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | TCAATGGCTTTACCATCCAGTTCCCCAGTCAGATGGTaGTATAGGACTCCAGCCCCCTCAACGTGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SMALPSSSPVRW*YRTPAPSTWKE Trigger: CTCTTTCCACGTTGAGGGGGCTGGAGTCCTATACAACCATCTGACTGGGGAACTGGATGGTAAAGCCATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | GAGAGGGCACCTTCTCAGGGACTGGCTTCGGAGTGCTaGTTCTTCTGGAGTAAAATCCAACCAGATTACGGT | + |
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Preference number: 6 (lower is better) Translates to: ERAPSQGLASEC*FFWSKIQPDYG Trigger: ACCGTAATCTGGTTGGATTTTACTCCAGAAGAACAAGCACTCCGAAGCCAGTCCCTGAGAAGGTGCCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 72 bp | AATCAGCCAGCAGACAGCGATAGACATCAGGACTGGTaGGGAAAACTGTGCAATCCCTGGCAAGGTTTACTG | + |
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Preference number: 6 (lower is better) Translates to: NQPADSDRHQDW*GKLCNPWQGLL Trigger: CAGTAAACCTTGCCAGGGATTGCACAGTTTTCCTCACCAGTCCTGATGTCTATCGCTGTCTGCTGGCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 72 bp | TCTTTATCCTTTATCATGGAGGGCACCCAGAGGAGCTaGTGTCTACTCTTCAGCTGGGGGATGGATTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SLSFIMEGTQRS*CLLFSWGMDFN Trigger: GTTGAAATCCATCCCCCAGCTGAAGAGTAGACAGCAGCTCCTCTGGGTGCCCTCCATGATAAAGGATAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS GCA 72 bp | GGCTTTTGGAAGAAACGATTGGGATCAGAGGCTTGTTaGTCAAACCACTCCAGTCTTCCTAGCAACGACTCC | + |
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Preference number: 6 (lower is better) Translates to: GFWKKRLGSEAC*SNHSSLPSNDS Trigger: GGAGTCGTTGCTAGGAAGACTGGAGTGGTTTGAGCAACAAGCCTCTGATCCCAATCGTTTCTTCCAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 72 bp | TCTTCAATGGCTTTACCATCCAGTTCCCCAGTCAGATaGTTGTATAGGACTCCAGCCCCCTCAACGTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSMALPSSSPVR*LYRTPAPSTWK Trigger: TTTCCACGTTGAGGGGGCTGGAGTCCTATACAACCATCTGACTGGGGAACTGGATGGTAAAGCCATTGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | AGGGTTTCAGCCAATTCATCCATACACCGTGTCTGTTaGGTCGCTTGTCCCAGCTTTTGTGCCTTGGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RVSANSSIHRVC*VACPSFCALGV Trigger: TACTCCCAAGGCACAAAAGCTGGGACAAGCGACCAAACAGACACGGTGTATGGATGAATTGGCTGAAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 72 bp | CGACTCCTGAAAGGAGAGGTACTTGAAGTAGTCCTCTaGAGACACCGAGGGTTTCAGCCAATTCATCCATAC | + |
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Preference number: 6 (lower is better) Translates to: RLLKGEVLEVVL*RHRGFQPIHPY Trigger: GTATGGATGAATTGGCTGAAACCCTCGGTGTCTTCAGAGGACTACTTCAAGTACCTCTCCTTTCAGGAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 72 bp | CCTCCACAGGAGCCTCTTTTTCATACATTTGGAAGATaGCGTGGAGGAAATCCGACTCCTGAAAGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PPQEPLFHTFGR*RGGNPTPERRG Trigger: ACCTCTCCTTTCAGGAGTCGGATTTCCTCCACGTCATCTTCCAAATGTATGAAAAAGAGGCTCCTGTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | AGCCAATTCATCCATACACCGTGTCTGTTTGGTCGCTaGTCCCAGCTTTTGTGCCTTGGGAGTAATGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SQFIHTPCLFGR*SQLLCLGSNVR Trigger: TCTCACATTACTCCCAAGGCACAAAAGCTGGGACAAGCGACCAAACAGACACGGTGTATGGATGAATTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 90 bp | TCCATTTCTTCAATGGCTTTACCATCCAGTTCCCCAGTCAGATGGTaGTATAGGACTCCAGCCCCCTCAACGTGGAAAGAGTCGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SISSMALPSSSPVRW*YRTPAPSTWKESLK Trigger: CTTTAACGACTCTTTCCACGTTGAGGGGGCTGGAGTCCTATACAACCATCTGACTGGGGAACTGGATGGTAAAGCCATTGAAGAAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CCA 72 bp | TGTTCCCAACAAGACGATCCGCATCCATTTCTTCAATaGCTTTACCATCCAGTTCCCCAGTCAGATGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: CSQQDDPHPFLQ*LYHPVPQSDGC Trigger: ACAACCATCTGACTGGGGAACTGGATGGTAAAGCCATTGAAGAAATGGATGCGGATCGTCTTGTTGGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | GACTGGTACCTCCACAGGAGCCTCTTTTTCATACATTaGGAAGATGACGTGGAGGAAATCCGACTCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: DWYLHRSLFFIH*EDDVEEIRLLK Trigger: TTTCAGGAGTCGGATTTCCTCCACGTCATCTTCCAAATGTATGAAAAAGAGGCTCCTGTGGAGGTACCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | GCCTTGATCAATGCTGGTAGCTGTTGCAGGCGTGCATaGGAGCTGTATTTAATAACCATGTCTAGCCGATTC | + |
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Preference number: 6 (lower is better) Translates to: ALINAGSCCRRA*ELYLITMSSRF Trigger: GAATCGGCTAGACATGGTTATTAAATACAGCTCCAATGCACGCCTGCAACAGCTACCAGCATTGATCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 90 bp | TCCAGTAACCGATTCATCAACAAATCAGGCTTTTGGAAGAAACGATaGGGATCAGAGGCTTGTTGCTCAAACCACTCCAGTCTTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSNRFINKSGFWKKR*GSEACCSNHSSLPS Trigger: GCTAGGAAGACTGGAGTGGTTTGAGCAACAAGCCTCTGATCCCAATCGTTTCTTCCAAAAGCCTGATTTGTTGATGAATCGGTTACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS TCA 72 bp | TCAGAGAGTTGCACAGTAGCTACCTGGACTATAACTTaGTCATGTACCTTCAAAGCAACAGTGACTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SESCTVATWTIT*SCTFKATVTGC Trigger: ACAGCCAGTCACTGTTGCTTTGAAGGTACATGATCAAGTTATAGTCCAGGTAGCTACTGTGCAACTCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 90 bp | AGCCCCCTCAACGTGGAAAGAGTCGTTAAAGTATCTTTCAGAGAGTaGCACAGTAGCTACCTGGACTATAACTTGATCATGTACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SPLNVERVVKVSFRE*HSSYLDYNLIMYLQ Trigger: TTGAAGGTACATGATCAAGTTATAGTCCAGGTAGCTACTGTGCAACTCTCTGAAAGATACTTTAACGACTCTTTCCACGTTGAGGGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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| CDS CAA 72 bp | AACGTGGAAAGAGTCGTTAAAGTATCTTTCAGAGAGTaGCACAGTAGCTACCTGGACTATAACTTGATCATG | + |
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Preference number: 6 (lower is better) Translates to: NVERVVKVSFRE*HSSYLDYNLIM Trigger: CATGATCAAGTTATAGTCCAGGTAGCTACTGTGCAACTCTCTGAAAGATACTTTAACGACTCTTTCCACGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088653.3 |
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