Pregenerated sensors for CCDC86 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024732Ensembl transcript IDs: ENSMUST00000025639.7
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCATAGTCGTCAGTTCCCTCTGGGCTGGAGTCTCCGTCTTAATGTaGCAGCGTTGGTGTGCTGGCTCCAGGAGAGGTGTCAGTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SIVVSSLWAGVSVLM*QRWCAGSRRGVSQW Trigger: CCACTGACTGACACCTCTCCTGGAGCCAGCACACCAACGCTGTCACATTAAGACGGAGACTCCAGCCCAGAGGGAACTGACGACTATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR GCA 90 bp | CACTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTaGCTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACA | + |
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Preference number: 1 (lower is better) Translates to: HWINSRQREQPTLIS*LAGRGPGSHHFQPT Trigger: TGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | GGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTaGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: GSILGRENNLPLLAA*QGEGLAAITSNLQV Trigger: TACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | GTTGTGTTGAGCAGGCCTCAAGCCTGTGGCAGGCGCTTCTCAAACTaGAGAGTAAAATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: VVLSRPQACGRRFSN*RVKCHQVPPALLSV Trigger: TACACTGAGTAAAGCAGGAGGGACTTGGTGACATTTTACTCTCCAGTTTGAGAAGCGCCTGCCACAGGCTTGAGGCCTGCTCAACACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | TCACTGCCCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTaGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SLPSFRAAAAGFQQH*INSRQREQPTLISC Trigger: GCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTGAAAGCCAGCAGCAGCAGCCCTAAAACTGGGCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR GCA 90 bp | ATGACTCAAGCCTCGAGGCTTCTACAGTCCAGTGTGGCAAAGGGGTaGTGGAGAGAAACTCAGCTCCCTGTAACACCCTACTTTAATCTT | + |
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Preference number: 1 (lower is better) Translates to: MTQASRLLQSSVAKG*WRETQLPVTPYFNL Trigger: AAGATTAAAGTAGGGTGTTACAGGGAGCTGAGTTTCTCTCCAGCACCCCTTTGCCACACTGGACTGTAGAAGCCTCGAGGCTTGAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | CCTGGGAGAGCAACAAGATGCAAAAGTAGCCATCGAGGAGTTACCTaGCTCTTGACTGCTGGCCTCCAGGTTTCTACACATTTAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PGRATRCKSSHRGVT*LLTAGLQVSTHLRA Trigger: TGCTCTTAAATGTGTAGAAACCTGGAGGCCAGCAGTCAAGAGCCAGGTAACTCCTCGATGGCTACTTTTGCATCTTGTTGCTCTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | GTCACACCATTATTTCAATGGTTTATTATGATAATGAAAGCCAAGTaGGGCAGGGGCTTCTGTCCTTCGGGGAGCCCAGAGCTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: VTPLFQWFIMIMKAK*GRGFCPSGSPELYL Trigger: TAAGTACAGCTCTGGGCTCCCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTGAAATAATGGTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | AATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTaGGAATCACACAGGTTAAGCTCACAGCCTGCATCTCATAACTCC | + |
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Preference number: 1 (lower is better) Translates to: NFVFLLPSWQLAQGT*ESHRLSSQPASHNS Trigger: GGAGTTATGAGATGCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 90 bp | GTCCCTCCTGCTTTACTCAGTGTACCTGTCACACCATTATTTCAATaGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: VPPALLSVPVTPLFQ*FIMIMKAKWGRGFC Trigger: ACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTGAAATAATGGTGTGACAGGTACACTGAGTAAAGCAGGAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAATTCTAGGCGTCGTCAGTTCCCTCTaGGCTGGAGTCTCCGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: PVLGLLLLAFSSTGSILGVVSSL*AGVSVL Trigger: TAAGACGGAGACTCCAGCCCAGAGGGAACTGACGAC...GCCTAGAATTGATCCAGTGCTGCTGAAAGCCAGCAGCAGCAGCCCTAAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCTGGCTGATTCCTCTTTACCTTCTAGGGGAAGGGGAGCTGATGTCAGAGTGGCAAAGGGGTGCTaGAGAGAAACTCAGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GKLADSSLPSRGRGADVRVAKGC*RETQLP Trigger: AGGGAGCTGAGTTTCTCTCCAGCACCCCTTTGCCAC...TCTGACATCAGCTCCCCTTCCCCTAGAAGGTAAAGAGGAATCAGCCAGCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR TCA 90 bp | CACTTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCTGGCCAAGATGTCACTaGAAAAATGGAGGTACTGAC | + |
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Preference number: 2 (lower is better) Translates to: HFQPTGRRGTCASHGPSIWPRCH*KNGGTD Trigger: GTCAGTACCTCCATTTTTTCAGTGACATCTTGGCCA...GATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAATTCTAGGCAGGCGGGAAAGGAGATaGGGACAGTTAAATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PVLGLLLLAFSSTGSILGRRERR*GQLNLS Trigger: AGAGAGATTTAACTGTCCCCATCTCCTTTCCCGCCT...GCCTAGAATTGATCCAGTGCTGCTGAAAGCCAGCAGCAGCAGCCCTAAAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR TCA 90 bp | ATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGACTGGCCTCGAACTCTaGGAGCTGCCTGTCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ITPCFVNGTKGVGQSVFMTGLEL*ELPVSV Trigger: GACAGAGACAGGCAGCTCTCAGAGTTCGAGGCCAGT...CATAAATACTGATTGGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCAGCAGCACTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGTGACAGCGTTGGTGTaGTGGCTCCAGGAGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AFSSTGSILGRENNLPLLVTALV*WLQERC Trigger: ACACCTCTCCTGGAGCCAGCACACCAACGCTGTCAC...TAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR GCA 90 bp | CTATCACACATTTCATGTCCTCCCCATCATAGACTGCAGGGAAGCTGGCTGATTAGTGTGGCAAAGGGGTaGTGGAGAGAAACTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSHISCPPHHRLQGSWLISVAKG*WRETQL Trigger: GAGCTGAGTTTCTCTCCAGCACCCCTTTGCCACACT...AATCAGCCAGCTTCCCTGCAGTCTATGATGGGGAGGACATGAAATGTGTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CCA 90 bp | CTATCACACATTTCATGTCCTCCCCATCATAGACTGCAGGGAAGCTGGCTGATTTTCTACAGTCCAGTGTaGCAAAGGGGTGCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LSHISCPPHHRLQGSWLIFYSPV*QRGAGE Trigger: CTCTCCAGCACCCCTTTGCCACACTGGACTGTAGAA...AATCAGCCAGCTTCCCTGCAGTCTATGATGGGGAGGACATGAAATGTGTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTACCTGTCACACCATTATTTCTGTCAGTCAGTGGCCTaGGAAGTGCCTTGTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: NVTKSLLLYSVYLSHHYFCQSVA*EVPCLL Trigger: CAGCAAACAAGGCACTTCTCAGGCCACTGACTGACA...GAAATAATGGTGTGACAGGTACACTGAGTAAAGCAGGAGGGACTTGGTGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR TCA 90 bp | ATTATTTCAATGGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGAAGTGCCTTGTTTGCTaGGGCCTATGGACTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IISMVYYDNESQVGQGLLKCLVC*GLWTVL Trigger: CAGGACAGTCCATAGGCCTCAGCAAACAAGGCACTT...CAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTGAAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CCA 90 bp | ATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGAGGCGCTTCTCAAACTaGAGAGTAAAATGTCACCAA | + |
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Preference number: 2 (lower is better) Translates to: ITPCFVNGTKGVGQSVFMRRFSN*RVKCHQ Trigger: TTGGTGACATTTTACTCTCCAGTTTGAGAAGCGCCT...CATAAATACTGATTGGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTAGGGTAACTGATAAGGGTCGGGTAAAATTTTGTATTTCTATTACCTTCAAAGGTGTGCATTGCTaGAACCACCCAGCAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: LARVTDKGRVKFCISITFKGVHC*NHPATV Trigger: AACTGTTGCTGGGTGGTTGCAGCAATGCACACCTTT...GAAGGTAATAGAAATACAAAATTTTACCCGACCCTTATCAGTTACCCTAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR TCA 72 bp | GTCAGTTCCCTCTGGGCTGGAGTCTCCGTCTTAATGTaGCAGCGTTGGTGTGCTGGCTCCAGGAGAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: VSSLWAGVSVLM*QRWCAGSRRGV Trigger: GACACCTCTCCTGGAGCCAGCACACCAACGCTGTCACATTAAGACGGAGACTCCAGCCCAGAGGGAACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR GCA 72 bp | GCCTCGAGGCTTCTACAGTCCAGTGTGGCAAAGGGGTaGTGGAGAGAAACTCAGCTCCCTGTAACACCCTAC | + |
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Preference number: 3 (lower is better) Translates to: ASRLLQSSVAKG*WRETQLPVTPY Trigger: GTAGGGTGTTACAGGGAGCTGAGTTTCTCTCCAGCACCCCTTTGCCACACTGGACTGTAGAAGCCTCGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | CTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTaGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: LGRENNLPLLAA*QGEGLAAITSN Trigger: GTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR GCA 72 bp | AATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTaGCTGGCAGGGAGAGGGCCTGGCAGCCATCACTTC | + |
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Preference number: 3 (lower is better) Translates to: NSRQREQPTLIS*LAGRGPGSHHF Trigger: GAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR TCA 72 bp | AATATGGAACAGGGATGGGGTAGTCTCAGGATCTCCTaGACCACGCAAGGCCAGGCTGGTTGTCAGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: NMEQGWGSLRIS*TTQGQAGCQLC Trigger: ACACAACTGACAACCAGCCTGGCCTTGCGTGGTTCAGGAGATCCTGAGACTACCCCATCCCTGTTCCATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | CTGGTTGTCAGTTGTGTTGAGCAGGCCTCAAGCCTGTaGCAGGCGCTTCTCAAACTGGAGAGTAAAATGTCA | + |
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Preference number: 3 (lower is better) Translates to: LVVSCVEQASSL*QALLKLESKMS Trigger: TGACATTTTACTCTCCAGTTTGAGAAGCGCCTGCCACAGGCTTGAGGCCTGCTCAACACAACTGACAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | TTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTaGGAATCACACAGGTTAAGCTCACAGCCTGCATCT | + |
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Preference number: 3 (lower is better) Translates to: FLLPSWQLAQGT*ESHRLSSQPAS Trigger: AGATGCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR-3UTR CAA 90 bp | GTGTCAACTCCCACTAGGGATTTTCACTGCCCAGTTTTAGGGCTGCTGCTGCTGACAGTTAAATCTCTCTaGAGTCCCAGCATAGTCGTC | + |
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Preference number: 3 (lower is better) Translates to: VSTPTRDFHCPVLGLLLLTVKSL*SPSIVV Trigger: GACGACTATGCTGGGACTCAAGAGAGATTTAACTGT...CAGCAGCAGCAGCCCTAAAACTGGGCAGTGAAAATCCCTAGTGGGAGTTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | GCAACAAGATGCAAAAGTAGCCATCGAGGAGTTACCTaGCTCTTGACTGCTGGCCTCCAGGTTTCTACACAT | + |
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Preference number: 3 (lower is better) Translates to: ATRCKSSHRGVT*LLTAGLQVSTH Trigger: ATGTGTAGAAACCTGGAGGCCAGCAGTCAAGAGCCAGGTAACTCCTCGATGGCTACTTTTGCATCTTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR TCA 72 bp | AGCCAACTGCCATCATTTTTAATCCCCCATTTGGCCTaGGACAGGTGCTTTAACCACACCTTGCTAGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SQLPSFLIPHLA*DRCFNHTLLVS Trigger: GCTGACTAGCAAGGTGTGGTTAAAGCACCTGTCTCAGGCCAAATGGGGGATTAAAAATGATGGCAGTTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | TCACAGCCTGCATCTCATAACTCCCTGCTTTGTGAATaGGACAAAGGGAGTCGGCCAATCAGTATTTATGGG | + |
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Preference number: 3 (lower is better) Translates to: SQPASHNSLLCE*DKGSRPISIYG Trigger: CCCATAAATACTGATTGGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTATGAGATGCAGGCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | TTATTTCAATGGTTTATTATGATAATGAAAGCCAAGTaGGGCAGGGGCTTCTGTCCTTCGGGGAGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFQWFIMIMKAK*GRGFCPSGSPE Trigger: CTCTGGGCTCCCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CCA 72 bp | GCTTTACTCAGTGTACCTGTCACACCATTATTTCAATaGTTTATTATGATAATGAAAGCCAAGTGGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ALLSVPVTPLFQ*FIMIMKAKWGR Trigger: CCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTGAAATAATGGTGTGACAGGTACACTGAGTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | CCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAATTCTAGGCTCCGGGGCTCGCCTCTaGCTGAGGTCCGGGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: PVLGLLLLAFSSTGSILGSGARL*LRSGRR Trigger: CCGTCTCCCGGACCTCAGCCAGAGGCGAGCCCCGGA...GCCTAGAATTGATCCAGTGCTGCTGAAAGCCAGCAGCAGCAGCCCTAAAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CAA 72 bp | CCTCTGGGCTGGAGTCTCCGTCTTAATGTGACAGCGTaGGTGTGCTGGCTCCAGGAGAGGTGTCAGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PLGWSLRLNVTA*VCWLQERCQSV Trigger: CACTGACTGACACCTCTCCTGGAGCCAGCACACCAACGCTGTCACATTAAGACGGAGACTCCAGCCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CAA 72 bp | TCTCAGGATCTCCTGAACCACGCAAGGCCAGGCTGGTaGTCAGTTGTGTTGAGCAGGCCTCAAGCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SQDLLNHARPGW*SVVLSRPQACG Trigger: GCCACAGGCTTGAGGCCTGCTCAACACAACTGACAACCAGCCTGGCCTTGCGTGGTTCAGGAGATCCTGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR TCA 90 bp | CACTTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCTGTCTGTCCTGCAGGTaGCTCCAGGCCCAGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: HFQPTGRRGTCASHGPSICLSCR*LQAQIL Trigger: CAAGATCTGGGCCTGGAGTCACCTGCAGGACAGACA...GATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR GCA 90 bp | AGCCCTGGCTATCCTGTACTCTATAGACAAGACTGGCCTCGAACTCTGAGAGCTCTCTGGGGAGCTAGGTaGCTGGACCGTCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPGYPVLYRQDWPRTLRALWGAR*LDRQLL Trigger: CAGGAGCTGACGGTCCAGGCACCTAGCTCCCCAGAG...AGCTCTCAGAGTTCGAGGCCAGTCTTGTCTATAGAGTACAGGATAGCCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | ACCACCCAGCAACAGTTTATGACTATAAGGCACTTTGGAACAGGCGGGAAAGGACGGAAGGCTCAGTGGTaGACAGGGCGATCCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TTQQQFMTIRHFGTGGKGRKAQW*TGRSGA Trigger: AGCCCCGGATCGCCCTGTCCACCACTGAGCCTTCCG...TCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGTTGCTGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | CCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAATTCTAGGCCTCTGGCTGCCTTTGTaGGGACCCATCGTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: PVLGLLLLAFSSTGSILGLWLPL*GPIVCI Trigger: GATGCAGACGATGGGTCCCCACAAAGGCAGCCAGAG...GCCTAGAATTGATCCAGTGCTGCTGAAAGCCAGCAGCAGCAGCCCTAAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | AAATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTACCTGTCACACCATTATTTGGACCCGGTGCTTGCTaGCCCGGGCAAGGCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KCHQVPPALLSVPVTPLFGPGAC*PGQGSG Trigger: CCCCGAGCCTTGCCCGGGCCAGCAAGCACCGGGTCC...AAATAATGGTGTGACAGGTACACTGAGTAAAGCAGGAGGGACTTGGTGACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CAA 72 bp | CAGGCGGGAAAGGAGATGGGGACAGTTAAATCTCTCTaGAGTCCCAGCATAGTCGTCAGTTCCCTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAGKEMGTVKSL*SPSIVVSSLWA Trigger: AGCCCAGAGGGAACTGACGACTATGCTGGGACTCAAGAGAGATTTAACTGTCCCCATCTCCTTTCCCGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCAGCACTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAAGACGGAAGGCTCAGTaGTGGACAGGGCGATCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AFSSTGSILGRENNLPLLRRKAQ*WTGRSG Trigger: CCCGGATCGCCCTGTCCACCACTGAGCCTTCCGTCT...TAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | CTATCACACATTTCATGTCCTCCCCATCATAGACTGCAGGGAAGCTGGCTGATTCAATTTCTTGGACGCTaGGGCCTGGGGAGAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: LSHISCPPHHRLQGSWLIQFLGR*GLGRGY Trigger: ATAGCCTCTCCCCAGGCCCCAGCGTCCAAGAAATTG...AATCAGCCAGCTTCCCTGCAGTCTATGATGGGGAGGACATGAAATGTGTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | GGGTGCTGGAGAGAAACTCAGCTCCCTGTAACACCCTACTTTAATCTTTTAGTGTTGGCTACAGGCCTCTaGGGTGGCTGTTTCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GCWRETQLPVTPYFNLLVLATGL*GGCFWS Trigger: GCTCCAGAAACAGCCACCCCAGAGGCCTGTAGCCAA...CACTAAAAGATTAAAGTAGGGTGTTACAGGGAGCTGAGTTTCTCTCCAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| 3UTR CAA 72 bp | ATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTaGGGAATCACACAGGTTAAGCTCACAGCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: ISITFLAARPRH*GITQVKLTACI Trigger: GATGCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR TCA 90 bp | CACTTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCCTCGCTTCTTTAGGTTaGGACTTTCTGTTACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HFQPTGRRGTCASHGPSILASLG*DFLLLS Trigger: AGACAGTAACAGAAAGTCTCAACCTAAAGAAGCGAG...GATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR TCA 90 bp | AGCCCTGGCTATCCTGTACTCTATAGACAAGACTGGCCTCGAACTCTGAGAGCTTCTTCTTTGCTTTCTTaGGCTTGGCAGGATTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: SPGYPVLYRQDWPRTLRASSLLS*AWQDCG Trigger: TCCGCAATCCTGCCAAGCTCAAGAAAGCAAAGAAGA...AGCTCTCAGAGTTCGAGGCCAGTCTTGTCTATAGAGTACAGGATAGCCAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | AATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTACCTGTCACACCATTATTTCTACAGGCCTCTGGGGTaGCTGTTTCTGGAGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: NVTKSLLLYSVYLSHHYFYRPLG*LFLEQG Trigger: GCCTTGCTCCAGAAACAGCCACCCCAGAGGCCTGTA...GAAATAATGGTGTGACAGGTACACTGAGTAAAGCAGGAGGGACTTGGTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCAGCACTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGTGGGGGAGGTAATTTaGATGGCTGCTCTCGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: AFSSTGSILGRENNLPLLVGEVI*MAALVA Trigger: CGCAACGAGAGCAGCCATCCAAATTACCTCCCCCAC...TAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTGAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CCA 90 bp | AAATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTACCTGTCACACCATTATTTTGGGGTGGCTGTTTCTaGAGCAAGGCCAGGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: KCHQVPPALLSVPVTPLFWGGCF*SKARVS Trigger: AGACACCCTGGCCTTGCTCCAGAAACAGCCACCCCA...AAATAATGGTGTGACAGGTACACTGAGTAAAGCAGGAGGGACTTGGTGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR GCA 90 bp | CCAGCAACAGTTTATGACTATAAGGCACTTTGGAACAGGCGGGAAAGGAGATGGCAACTGCTTCTTCTTTaGTTTCTTGAGCTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PATVYDYKALWNRRERRWQLLLL*FLELGR Trigger: CCTGCCAAGCTCAAGAAAGCAAAGAAGAAGCAGTTG...CCATCTCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGTTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR GCA 90 bp | CTTGAGTCCCAGCATAGTCGTCAGTTCCCTCTGGGCTGGAGTCTCCGTCTTAATTCAATAGAACGCAACTaGTTCTTCTTTGCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LESQHSRQFPLGWSLRLNSIERN*FFFAFL Trigger: CAAGAAAGCAAAGAAGAAGCAGTTGCGTTCTATTGA...ATTAAGACGGAGACTCCAGCCCAGAGGGAACTGACGACTATGCTGGGACTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS TCA 90 bp | TCTGCATCCTGTCTAGGACCGGGTGATCCGGGGCTCGCCTCTGGCTaGGGTCCGGGAGACGGAAGGCTCAGTGGTGGACAGGGCGATCCG | + |
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Preference number: 5 (lower is better) Translates to: SASCLGPGDPGLASG*GPGDGRLSGGQGDP Trigger: CGGATCGCCCTGTCCACCACTGAGCCTTCCGTCTCCCGGACCTCAGCCAGAGGCGAGCCCCGGATCACCCGGTCCTAGACAGGATGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS CCA 90 bp | AGACGGAAGGCTCAGTGGTGGACAGGGCGATCCGGGGCTCGTCTCTaGCTGAGGTCCGGGAGACGGAAGGCTCAGTGGTGGACAGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RRKAQWWTGRSGARL*LRSGRRKAQWWTGR Trigger: TCGCCCTGTCCACCACTGAGCCTTCCGTCTCCCGGACCTCAGCCAGAGACGAGCCCCGGATCGCCCTGTCCACCACTGAGCCTTCCGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS TCA 90 bp | CTGCCTTTGTGGGGACCCATCGTCTGCATCCTGTCTAGGACCGGGTaGTCCGGGGCTCGCCTCTGGCTGAGGTCCGGGAGACGGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LPLWGPIVCILSRTG*SGARLWLRSGRRKA Trigger: AGCCTTCCGTCTCCCGGACCTCAGCCAGAGGCGAGCCCCGGATCACCCGGTCCTAGACAGGATGCAGACGATGGGTCCCCACAAAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS TCA 90 bp | CTCTCGTTGCGGGGATTCCGGGCTCGACTCTGTCTGTCCTGCAGGTaGCTCCAGGCCCAGATCTTGATGAGGTTGAAGGGACCCGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LSLRGFRARLCLSCR*LQAQILMRLKGPGV Trigger: CACCCCGGGTCCCTTCAACCTCATCAAGATCTGGGCCTGGAGTCACCTGCAGGACAGACAGAGTCGAGCCCGGAATCCCCGCAACGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | AGCCCTGGCTATCCTGTACTCTATAGACAAGACTGGCCTCGAACTCTGAGAGCTCCCGCCGGAGGCAGCTaGCCTGGCTCCAACTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SPGYPVLYRQDWPRTLRAPAGGS*PGSNWR Trigger: GCGCCAGTTGGAGCCAGGCAAGCTGCCTCCGGCGGG...AGCTCTCAGAGTTCGAGGCCAGTCTTGTCTATAGAGTACAGGATAGCCAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CCAGCAACAGTTTATGACTATAAGGCACTTTGGAACAGGCGGGAAAGGAGATGGCAGATCTTGATGAGGTaGAAGGGACCCGGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PATVYDYKALWNRRERRWQILMR*KGPGVR Trigger: CCTCACCCCGGGTCCCTTCAACCTCATCAAGATCTG...CCATCTCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CCAGCAACAGTTTATGACTATAAGGCACTTTGGAACAGGCGGGAAAGGAGATGGCTCCAGGCCCAGATCTaGATGAGGTTGAAGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: PATVYDYKALWNRRERRWLQAQI*MRLKGP Trigger: GGGTCCCTTCAACCTCATCAAGATCTGGGCCTGGAG...CCATCTCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGTTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CACTTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCTTTGCTTTCTTGAGCTaGGCAGGATTGCGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: HFQPTGRRGTCASHGPSIFAFLS*AGLRIT Trigger: AGTGATCCGCAATCCTGCCAAGCTCAAGAAAGCAAA...GATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CACTTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCACTCGCTTCTTTAGGTaGAGACTTTCTGTTACTGTC | + |
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Preference number: 5 (lower is better) Translates to: HFQPTGRRGTCASHGPSITRFFR*RLSVTV Trigger: GACAGTAACAGAAAGTCTCAACCTAAAGAAGCGAGT...GATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | ACCACCCAGCAACAGTTTATGACTATAAGGCACTTTGGAACAGGCGGGAAAGGATGGGAGAACCTCTTCTaGGAGCGGTCTTTCCACACA | + |
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Preference number: 5 (lower is better) Translates to: TTQQQFMTIRHFGTGGKGWENLF*ERSFHT Trigger: TGTGTGGAAAGACCGCTCCAAGAAGAGGTTCTCCCA...TCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGTTGCTGGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CTATCACACATTTCATGTCCTCCCCATCATAGACTGCAGGGAAGCTGGCTGATTTTGAGCTTGGCAGGATaGCGGATCACTTGGACAATC | + |
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Preference number: 5 (lower is better) Translates to: LSHISCPPHHRLQGSWLILSLAG*RITWTI Trigger: GATTGTCCAAGTGATCCGCAATCCTGCCAAGCTCAA...AATCAGCCAGCTTCCCTGCAGTCTATGATGGGGAGGACATGAAATGTGTGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS-3UTR CAA 90 bp | CTATCACACATTTCATGTCCTCCCCATCATAGACTGCAGGGAAGCTGGCTGATTTTCTTCTTTGCTTTCTaGAGCTTGGCAGGATTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LSHISCPPHHRLQGSWLIFFFAF*SLAGLR Trigger: CCGCAATCCTGCCAAGCTCAAGAAAGCAAAGAAGAA...AATCAGCCAGCTTCCCTGCAGTCTATGATGGGGAGGACATGAAATGTGTGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS TCA 72 bp | TGTCTAGGACCGGGTGATCCGGGGCTCGCCTCTGGCTaGGGTCCGGGAGACGGAAGGCTCAGTGGTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: CLGPGDPGLASG*GPGDGRLSGGQ Trigger: CTGTCCACCACTGAGCCTTCCGTCTCCCGGACCTCAGCCAGAGGCGAGCCCCGGATCACCCGGTCCTAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS GCA 72 bp | CTTGCCTGGCTCCAACTGGCGCTCTGGGGAGCTAGGTaGCTGGACCGTCAGCTCCTGTGCTGGCTGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LAWLQLALWGAR*LDRQLLCWLRG Trigger: CCCTCTCAGCCAGCACAGGAGCTGACGGTCCAGGCACCTAGCTCCCCAGAGCGCCAGTTGGAGCCAGGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS TCA 72 bp | CGGGGATTCCGGGCTCGACTCTGTCTGTCCTGCAGGTaGCTCCAGGCCCAGATCTTGATGAGGTTGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: RGFRARLCLSCR*LQAQILMRLKG Trigger: TCCCTTCAACCTCATCAAGATCTGGGCCTGGAGTCACCTGCAGGACAGACAGAGTCGAGCCCGGAATCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS CAA 90 bp | TTGGACGCTGGGGCCTGGGGAGAGGCTATAACTCGCTTCTTTAGGTaGAGACTTTCTGTTACTGTCTCTCCCGCCGGAGGCAGCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LDAGAWGEAITRFFR*RLSVTVSPAGGSLP Trigger: AGGCAAGCTGCCTCCGGCGGGAGAGACAGTAACAGAAAGTCTCAACCTAAAGAAGCGAGTTATAGCCTCTCCCCAGGCCCCAGCGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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| CDS CAA 72 bp | GGGGCCTGGGGAGAGGCTATAACTCGCTTCTTTAGGTaGAGACTTTCTGTTACTGTCTCTCCCGCCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GAWGEAITRFFR*RLSVTVSPAGG Trigger: GCCTCCGGCGGGAGAGACAGTAACAGAAAGTCTCAACCTAAAGAAGCGAGTTATAGCCTCTCCCCAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025639.7 |
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