Pregenerated sensors for CCDC85C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000084883Ensembl transcript IDs: ENSMUST00000136175.3, ENSMUST00000222310.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGCCACCAACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTaGGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SATNSRSSRPVPYSP*ATLPGHTEGHGPFP Trigger: GGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGTTGGTGGCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CAGGCTGCCTGGCCACTTGGCTGCAGCGAGCGGGCAAGCGAGCAGTaGCTTCTCGTCTTCCCAAGGTTTGCTGGTGAGGGAGGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QAAWPLGCSERASEQ*LLVFPRFAGEGGRR Trigger: CCTCCTGCCTCCCTCACCAGCAAACCTTGGGAAGACGAGAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CGAGGGCCATGGGCCTTTCCCCTGAGAGTGTGGGACCCAAGGGTGTaGGCAGCAAAGGTGCTGGGTACCACCCAAGGTTACGGGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: RGPWAFPLRVWDPRV*AAKVLGTTQGYGAW Trigger: CCAGGCCCCGTAACCTTGGGTGGTACCCAGCACCTTTGCTGCCCACACCCTTGGGTCCCACACTCTCAGGGGAAAGGCCCATGGCCCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | TGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTaGGAGTGTGGGACCCAAGGGTGTGGGCAGCAAAGGTGCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: CATLPGHTEGHGPFP*ECGTQGCGQQRCWV Trigger: TACCCAGCACCTTTGCTGCCCACACCCTTGGGTCCCACACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | GAACATGGAGCTCAAACGGGGAGCCAGGCTGCCTGGCCACTTGGCTaGAGCGAGCGGGCAAGCGAGCAGTGGCTTCTCGTCTTCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: EHGAQTGSQAAWPLG*SERASEQWLLVFPR Trigger: CCTTGGGAAGACGAGAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCATGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | ACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGAGTGTaGGACCCAAGGGTGTGGGCAGCAAAGGTGCTGGGTACCACCCAA | + |
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Preference number: 1 (lower is better) Translates to: TPWAHRGPWAFPLRV*DPRVWAAKVLGTTQ Trigger: TTGGGTGGTACCCAGCACCTTTGCTGCCCACACCCTTGGGTCCCACACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | TGGCTTCTCGTCTTCCCAAGGTTTGCTGGTGAGGGAGGCAGGAGGTaGAGGCCTGGCTGTCAGCATCACACCAGGGCAGCCAGGGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: WLLVFPRFAGEGGRR*RPGCQHHTRAARVG Trigger: GCCTACCCTGGCTGCCCTGGTGTGATGCTGACAGCCAGGCCTCCACCTCCTGCCTCCCTCACCAGCAAACCTTGGGAAGACGAGAAGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | TGCTCTGTGACCCAGGGTCCTGGCTCTGGCAGGGTAGCAGAAAAGTaGCACCCGCGTCACGATTCAGGCTCCGGTGGCATCTGTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CSVTQGPGSGRVAEK*HPRHDSGSGGICPV Trigger: CACTGGACAGATGCCACCGGAGCCTGAATCGTGACGCGGGTGGCACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGGGTCACAGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | CGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTaGTGGCCTCTCCTGTTAGGTTTGAGATATGACCCAGGCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RKTTCPPWPRAQLGC*WPLLLGLRYDPGCP Trigger: AGGACAGCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | ATGGACACACGGGACCCAGTGCTCTGTGACCCAGGGTCCTGGCTCTaGCAGGGTAGCAGAAAAGTGCCACCCGCGTCACGATTCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: MDTRDPVLCDPGSWL*QGSRKVPPASRFRL Trigger: GAGCCTGAATCGTGACGCGGGTGGCACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGGGTCACAGAGCACTGGGTCCCGTGTGTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CCAGTCATGGACACACGGGACCCAGTGCTCTGTGACCCAGGGTCCTaGCTCTGGCAGGGTAGCAGAAAAGTGCCACCCGCGTCACGATTC | + |
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Preference number: 1 (lower is better) Translates to: PVMDTRDPVLCDPGS*LWQGSRKVPPASRF Trigger: GAATCGTGACGCGGGTGGCACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGGGTCACAGAGCACTGGGTCCCGTGTGTCCATGACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | CCCCCGCCCACAGGTCCCTTGGAGGGAGGGGCTAAGGCTCAGATGTaGCCTGTGAGGAGACAGCATGACAAACAGGCTGGCCTAGCATGT | + |
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Preference number: 1 (lower is better) Translates to: PPPTGPLEGGAKAQM*PVRRQHDKQAGLAC Trigger: ACATGCTAGGCCAGCCTGTTTGTCATGCTGTCTCCTCACAGGTCACATCTGAGCCTTAGCCCCTCCCTCCAAGGGACCTGTGGGCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | TCACGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTaGTGCTGGCCTCTCCTGTTAGGTTTGAGATATGACCCAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SRKTTCPPWPRAQLG*CWPLLLGLRYDPGC Trigger: ACAGCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CAAGAGGCAGAAGGAACGGCTGGGGGCCCAGGGAAGCTGAGTGGCTaGCTGAAGGCCACACAGCAGATTAAAGCCAGAACCAGGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: QEAEGTAGGPGKLSG*LKATQQIKARTRHA Trigger: GGCATGCCTGGTTCTGGCTTTAATCTGCTGTGTGGCCTTCAGCCAGCCACTCAGCTTCCCTGGGCCCCCAGCCGTTCCTTCTGCCTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | AAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTaGCCTCTCCTGTTAGGTTTGAGATATGACCCAGGCTGTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KTTCPPWPRAQLGCC*PLLLGLRYDPGCPR Trigger: CCTAGGACAGCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | GGCGCGTGGCTGTTGATCGCAAATGAAGATGTGCTCAGCAGATTCTaGCTCCGGGGAAGGCCAGGCCACCCTAGATGGGGCCAAGTGACC | + |
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Preference number: 1 (lower is better) Translates to: GAWLLIANEDVLSRF*LRGRPGHPRWGQVT Trigger: GGTCACTTGGCCCCATCTAGGGTGGCCTGGCCTTCCCCGGAGTCAGAATCTGCTGAGCACATCTTCATTTGCGATCAACAGCCACGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CAGTCCCTTGGCTTGGAGTCTCAGAGGCTTCTTGCTGACAGAACATaGAGCTCAAACGGGGAGCCAGGCTGCCTGGCCACTTGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: QSLGLESQRLLADRT*SSNGEPGCLATWLQ Trigger: CTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | ACCTTCTTGGCCTGTCCCCTCTGCTCACAGGGTTTGGGAGGGACCTaGGGCAAGGACAAGCTCTTTGGGCTTGCTGCATGGGGCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: TFLACPLCSQGLGGT*GKDKLFGLAAWGSK Trigger: CTTAGAGCCCCATGCAGCAAGCCCAAAGAGCTTGTCCTTGCCTCAGGTCCCTCCCAAACCCTGTGAGCAGAGGGGACAGGCCAAGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | CTCCGTCACATTGACAGTGACCCTGGGCAATGGCCCAGTTCTACCTaGCCATTGAGAATGCTGAGCCTGGCTCAGACACTCTCCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: LRHIDSDPGQWPSST*PLRMLSLAQTLSRT Trigger: AGTCCTGGAGAGTGTCTGAGCCAGGCTCAGCATTCTCAATGGGCAGGTAGAACTGGGCCATTGCCCAGGGTCACTGTCAATGTGACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | CTGGCGAAGCCAGCAGTGTGGCCAGGGCCTCCTACAGACAGCATCTaGATGGTTCACAAAAGCACCTCACTCTCCTCCAACCACACTAGA | + |
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Preference number: 1 (lower is better) Translates to: LAKPAVWPGPPTDSI*MVHKSTSLSSNHTR Trigger: TCTAGTGTGGTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | GACCTTCTACCAAGAGCAGGCTACCTCCCAGACAGTCCCTTGGCTTaGAGTCTCAGAGGCTTCTTGCTGACAGAACATGGAGCTCAAACG | + |
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Preference number: 1 (lower is better) Translates to: DLLPRAGYLPDSPLA*SLRGFLLTEHGAQT Trigger: CGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCTGGGAGGTAGCCTGCTCTTGGTAGAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CGAAGCCAGCAGTGTGGCCAGGGCCTCCTACAGACAGCATCTGCATaGTTCACAAAAGCACCTCACTCTCCTCCAACCACACTAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RSQQCGQGLLQTASA*FTKAPHSPPTTLEK Trigger: TTTCTCTAGTGTGGTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | GATGGGTGTGGATGTAAATACACGGAACTGGCGAAGCCAGCAGTGTaGCCAGGGCCTCCTACAGACAGCATCTGCATGGTTCACAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: DGCGCKYTELAKPAV*PGPPTDSICMVHKS Trigger: GCTTTTGTGAACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCCACACCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CCACCTTGTGTGGGCCACATACCTCAACATTATTCTGCGGTTTCTTaGCTTCAAAGAACCAGGAAGGGTCTTGCCTGCCCAGCAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: PPCVGHIPQHYSAVS*LQRTRKGLACPAAH Trigger: GTGGGCTGCTGGGCAGGCAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTATGTGGCCCACACAAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | GGTATAGCTTGTCTCTCTCTGCCTGCACAAGGGCAGAGGAGCCTGTaGGAAATTCTCTTTAGATTCCCTGGATGCCCTGCAGCACTAGGG | + |
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Preference number: 1 (lower is better) Translates to: GIACLSLPAQGQRSL*EILFRFPGCPAALG Trigger: CCCTAGTGCTGCAGGGCATCCAGGGAATCTAAAGAGAATTTCTCACAGGCTCCTCTGCCCTTGTGCAGGCAGAGAGAGACAAGCTATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | GACTTGGCTCCCACCTTGTGTGGGCCACATACCTCAACATTATTCTaGGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: DLAPTLCGPHTSTLF*GFLASKNQEGSCLP Trigger: GGGCAGGCAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTATGTGGCCCACACAAGGTGGGAGCCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CAGGGTAGCAGAAAAGTGCCACCCGCGTCACGATTCAGGCTCCGGTaGCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: QGSRKVPPASRFRLR*HLSSVRDRELEYLL Trigger: CAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATGCCACCGGAGCCTGAATCGTGACGCGGGTGGCACTTTTCTGCTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | ACAAGCTCTTTGGGCTTGCTGCATGGGGCTCTAAGTACCATTGCGTaGGGACAGCTGATGGGTGTGGATGTAAATACACGGAACTGGCGA | + |
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Preference number: 1 (lower is better) Translates to: TSSLGLLHGALSTIA*GQLMGVDVNTRNWR Trigger: TCGCCAGTTCCGTGTATTTACATCCACACCCATCAGCTGTCCTCACGCAATGGTACTTAGAGCCCCATGCAGCAAGCCCAAAGAGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | AAGGACAAGCTCTTTGGGCTTGCTGCATGGGGCTCTAAGTACCATTaGGTGAGGACAGCTGATGGGTGTGGATGTAAATACACGGAACTG | + |
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Preference number: 1 (lower is better) Translates to: KDKLFGLAAWGSKYH*VRTADGCGCKYTEL Trigger: CAGTTCCGTGTATTTACATCCACACCCATCAGCTGTCCTCACGCAATGGTACTTAGAGCCCCATGCAGCAAGCCCAAAGAGCTTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 90 bp | CTCTCCAGGACTTTCCTATGTTGCTGTAAACCAGAAAAGGAAGCCTaGCAGGAGAGACCTACAAAGTGGCTAAGCCTGGCATTGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSRTFLCCCKPEKEA*QERPTKWLSLALVR Trigger: CCTCACCAATGCCAGGCTTAGCCACTTTGTAGGTCTCTCCTGCCAGGCTTCCTTTTCTGGTTTACAGCAACATAGGAAAGTCCTGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 90 bp | CAGAGGTGGCTGAACTGTCCTGATACAAATGTGACTGGGACTCTCTaGCTTGGCTCCCACCTTGTGTGGGCCACATACCTCAACATTATT | + |
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Preference number: 1 (lower is better) Translates to: QRWLNCPDTNVTGTL*LGSHLVWATYLNII Trigger: AATAATGTTGAGGTATGTGGCCCACACAAGGTGGGAGCCAAGTCAGAGAGTCCCAGTCACATTTGTATCAGGACAGTTCAGCCACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | AGAATGCTGAGCCTGGCTCAGACACTCTCCAGGACTTTCCTATGTTaGTGTAAACCAGAAAAGGAAGCCTGGCAGGAGAGACCTACAAAG | + |
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Preference number: 1 (lower is better) Translates to: RMLSLAQTLSRTFLC*CKPEKEAWQERPTK Trigger: CTTTGTAGGTCTCTCCTGCCAGGCTTCCTTTTCTGGTTTACAGCAACATAGGAAAGTCCTGGAGAGTGTCTGAGCCAGGCTCAGCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 90 bp | GGACAGGATCTTTCTTGTCTTCAGACTCCAAGAGCTCTTACTTATTaGTTATTTCAGAGGTGGCTGAACTGTCCTGATACAAATGTGACT | + |
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Preference number: 1 (lower is better) Translates to: GQDLSCLQTPRALTY*LFQRWLNCPDTNVT Trigger: AGTCACATTTGTATCAGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTGAAGACAAGAAAGATCCTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGGTGCCGCCTTCCGGCTaGGGCGCGAGCAACGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: KGRVTEDHLPSLAPGSTGVPPSG*GASNVH Trigger: GTGAACGTTGCTCGCGCCTCAGCCGGAAGGCGGCAC...CCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGAGTGGACCCAGTGCTCTGTaGCCCAGGGTCCTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PAQHSLGTPRAMGLSPESGPSAL*PRVLAL Trigger: CAGAGCCAGGACCCTGGGTCACAGAGCACTGGGTCC...ACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTGGGAAGCTGAGTGGCTaGCTGAAGGCCACACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PPALPGPGLNWVAAGLSCGKLSG*LKATQQ Trigger: CTGCTGTGTGGCCTTCAGCCAGCCACTCAGCTTCCC...ACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGAGTTGTGACCCAGGGTCCTaGCTCTGGCAGGGTAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PAQHSLGTPRAMGLSPESCDPGS*LWQGSR Trigger: TCTGCTACCCTGCCAGAGCCAGGACCCTGGGTCACA...ACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGACAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTCCCAAGGTTTGCTGGTaGGGGAGGCAGGAGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QVTGNPELPASHGHTGPSPKVCW*GRQEVE Trigger: CTCCACCTCCTGCCTCCCTCACCAGCAAACCTTGGG...ACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTGTCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCGGGTGGTTTCTAGAGTaGGCAAGAGGCAGAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TAGAVGRSPTAPAQHSLGGWFLE*ARGRRN Trigger: GTTCCTTCTGCCTCTTGCTCACTCTAGAAACCACCC...GCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGCTAAGTACCATTGCGTaGGGACAGCTGATGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLRNTPWAHRGPWAFPLLSTIA*GQLMGV Trigger: CACACCCATCAGCTGTCCTCACGCAATGGTACTTAG...CAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCCTAGATGGGGCCAAGTaGCCTGTCACAGTGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPLDGAK*PVTVGT Trigger: CGTCCCCACTGTGACAGGTCACTTGGCCCCATCTAG...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAAAGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCGCCCACAGGTCCCTTaGAGGGAGGGGCTAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LQRLRLQKGRVTEDHLPSRPQVP*REGLRL Trigger: GAGCCTTAGCCCCTCCCTCCAAGGGACCTGTGGGCG...GGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCTTTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCTGGGACCCAAGGGTGTaGGCAGCAAAGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPWDPRV*AAKVLG Trigger: ACCCAGCACCTTTGCTGCCCACACCCTTGGGTCCCA...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCCTCAGATGTGACCTGTaGGGAGACAGCATGACAAAC | + |
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Preference number: 2 (lower is better) Translates to: TAGAVGRSPTAPAQHSLGLRCDL*GDSMTN Trigger: GTTTGTCATGCTGTCTCCTCACAGGTCACATCTGAG...GCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCGGGCTCAACTGGGTTaGTGCTGGCCTCTCCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RLRLQKGRVTEDHLPSLARAQLG*CWPLLL Trigger: TAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCG...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTCACGGAGAAAGACGGTaGCTGGGCCGGAGTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QVTGNPELPASHGHTGPSHGERR*LGRSFC Trigger: GCAGAAACTCCGGCCCAGCCACCGTCTTTCTCCGTG...ACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTGTCACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCTCTGCTCACAGGGTTTaGGAGGGACCTGAGGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPSAHRV*EGPEAR Trigger: CCTTGCCTCAGGTCCCTCCCAAACCCTGTGAGCAGA...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCTTTCCCCTGAGAGTGTaGGACCCAAGGGTGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPFPLRV*DPRVWA Trigger: TGCCCACACCCTTGGGTCCCACACTCTCAGGGGAAA...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | TGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTTAGGTTaGAGATATGACCCAGGCTGTCCTAGGGAAGCCAGCCTACTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: WPRAQLGCCWPLLLG*RYDPGCPREASLLP Trigger: CGGCAGTAGGCTGGCTTCCCTAGGACAGCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTGCTCTGTCCAGGGTCCTGGCTCTaGCAGGGTAGCAGAAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGTLSSQPVMDTRDPVLCPGSWL*QGSRKV Trigger: CACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGG...ACAGAGCACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAGAAGACCGGCCCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCGAAGCCAGCAGTGTaGCCAGGGCCTCCTACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: YRRPAQGRNQALQPLPKAAKPAV*PGPPTD Trigger: GTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGC...TGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGGGCCGGTCTTCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | GGCTACCTCCCAGACAGTCCCTTGGCTTGGAGTCTCAGAGGCTTCTaGCTGACAGAACATGGAGCTCAAACGGGGAGCCAGGCTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GYLPDSPLAWSLRGF*LTEHGAQTGSQAAW Trigger: CCAGGCAGCCTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCTGGGAGGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAGAAGACCGGCCCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCACAGGAGGTGGAGGCCTaGCTGTCAGCATCACACCAG | + |
|
Preference number: 2 (lower is better) Translates to: YRRPAQGRNQALQPLPKAQEVEA*LSASHQ Trigger: CTGGTGTGATGCTGACAGCCAGGCCTCCACCTCCTG...TGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGGGCCGGTCTTCTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCCTTGCTGACAGAACATaGAGCTCAAACGGGGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPLADRT*SSNGEP Trigger: TGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAG...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGGATGTAAATACACGGAACTGGCGAAGCCAGCAGTGTGGCCAGGGCCTCTCAGGGGATCAGGGGTaGCTCCTTGTAGCACACGGG | + |
|
Preference number: 2 (lower is better) Translates to: GVDVNTRNWRSQQCGQGLSGDQG*LLVAHG Trigger: CCCGTGTGCTACAAGGAGCCACCCCTGATCCCCTGA...GAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCCACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | GCTGTCCTAGGGAAGCCAGCCTACTGCCGAGGGCTGGGGTATAGCTaGTCTCTCTCTGCCTGCACAAGGGCAGAGGAGCCTGTGAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: AVLGKPAYCRGLGYS*SLSACTRAEEPVRN Trigger: ATTTCTCACAGGCTCCTCTGCCCTTGTGCAGGCAGAGAGAGACAAGCTATACCCCAGCCCTCGGCAGTAGGCTGGCTTCCCTAGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCACGTCACTGAAGGAGTaGATACTAACGAGGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RLRLQKGRVTEDHLPSLATSLKE*ILTRRS Trigger: GCTTCTCCTCGTTAGTATTCACTCCTTCAGTGACGT...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCACACAGCAGATTAAAGCCAGAACCAGGCATGCCCCCATCCTTCCCAAGGAAACACACGGGACCCAGTaGTCTGTGACCCAGGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ATQQIKARTRHAPILPKETHGTQ*SVTQGP Trigger: AGGACCCTGGGTCACAGAGCACTGGGTCCCGTGTGT...TTCCTTGGGAAGGATGGGGGCATGCCTGGTTCTGGCTTTAATCTGCTGTGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCCTACAGACAGCATCTaGATGGTTCACAAAAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: RLRLQKGRVTEDHLPSLAPTDSI*MVHKST Trigger: GGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAGG...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCAAACGGGGAGCCAGGCTaGCTGGCCACTTGGCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPNGEPG*LATWLQ Trigger: CTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTT...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAAAGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCGCCGGCAGATGGAGTTaGAAGTTCTATCGATTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LQRLRLQKGRVTEDHLPSAGRWS*KFYRLT Trigger: GGTCAATCGATAGAACTTGCAACTCCATCTGCCGGC...GGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCTTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGGATGTAAATACACGGAACTGGCGAAGCCAGCAGTGTGGCCAGGGCCTCGACAGTCCCTTGGCTTaGAGTCTCAGAGGCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GVDVNTRNWRSQQCGQGLDSPLA*SLRGFL Trigger: CAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTC...GAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | CCAGTACCAGCTGGGGCCGGCAGATGGAGTTGCAAGTTCTATCGATaGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: PVPAGAGRWSCKFYR*TIQQLLERASQCHQ Trigger: TTGGTGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTGCAACTCCATCTGCCGGCCCCAGCTGGTACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCACAGTGGGGACGGGGGTGGAGCCAGCACAAGCATATTGTGAGCTTGGGGGTCCTGATACAAATGTaGCTGGGACTCTCTGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSQWGRGWSQHKHIVSLGVLIQM*LGLSDL Trigger: CAAGTCAGAGAGTCCCAGTCACATTTGTATCAGGAC...CCCCAAGCTCACAATATGCTTGTGCTGGCTCCACCCCCGTCCCCACTGTGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCACAGTGGGGACGGGGGTGGAGCCAGCACAAGCATATTGTGAGCTTGGGGGGGCAGAGGAGCCTGTaGGAAATTCTCTTTAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQWGRGWSQHKHIVSLGGQRSL*EILFRF Trigger: GAATCTAAAGAGAATTTCTCACAGGCTCCTCTGCCC...CCCCAAGCTCACAATATGCTTGTGCTGGCTCCACCCCCGTCCCCACTGTGACAG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTTGAGGGACCTTCTGGCTGCCTGGCCACTTaGCTGCAGCGAGCGGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ASVQCKGQRVRILVEGPSGCLAT*LQRAGK Trigger: CTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCC...AGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | CCCACCTTGTGTGGGCCACATACCTCAACATTATTCTGCGGTTTCTaGGCTTCAAAGAACCAGGAAGGGTCTTGCCTGCCCAGCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PTLCGPHTSTLFCGF*ASKNQEGSCLPSSP Trigger: TGGGCTGCTGGGCAGGCAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTATGTGGCCCACACAAGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | CGGTGGCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTaGAGGGACCTTCTACCAAGAGCAGGCTACCTCCCAGACAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RWHLSSVRDRELEYL*RDLLPRAGYLPDSP Trigger: GGGACTGTCTGGGAGGTAGCCTGCTCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 90 bp | CTCCGGTGGCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTaGTTGAGGGACCTTCTACCAAGAGCAGGCTACCTCCCAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LRWHLSSVRDRELEY*LRDLLPRAGYLPDS Trigger: ACTGTCTGGGAGGTAGCCTGCTCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATGCCACCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTCCAAGAGCTCTTACTTATTGCTTATTTCAGAGGTGGCTGAACTGTCCTGGGGCCTGGGCTTGTTaGGGAGCAAGGATGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: QTPRALTYCLFQRWLNCPGAWAC*GARMSP Trigger: GGGTGACATCCTTGCTCCCCAACAAGCCCAGGCCCC...AGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCACAGTGGGGACGGGGGTGGAGCCAGCACAAGCATATTGTGAGCTTGGGGAGGACTTTCCTATGTTaGTGTAAACCAGAAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQWGRGWSQHKHIVSLGRTFLC*CKPEKE Trigger: TTCCTTTTCTGGTTTACAGCAACATAGGAAAGTCCT...CCCCAAGCTCACAATATGCTTGTGCTGGCTCCACCCCCGTCCCCACTGTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCAGTAAATACACGGAACTaGCGAAGCCAGCAGTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPVNTRN*RSQQCG Trigger: GCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTAC...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGGAAAGAGCTTCCCAGTaGCACCAACAGCCGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: YLNIILRFLGFKEPGRVLERASQ*HQQPEQ Trigger: CTGCTCCGGCTGTTGGTGGCACTGGGAAGCTCTTTC...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGTGTCACCCACCTTCTTaGCCTGTCCCCTCTGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: YLNIILRFLGFKEPGRVLCHPPS*PVPSAH Trigger: GTGAGCAGAGGGGACAGGCCAAGAAGGTGGGTGACA...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR GCA 90 bp | CTACAGACAGCATCTGCATGGTTCACAAAAGCACCTCACTCTCCTCCAACCACAATGTTCCCAGTAGGTTaGCACATGAGCTCTTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LQTASAWFTKAPHSPPTTMFPVG*HMSSST Trigger: AGTGGAAGAGCTCATGTGGCAACCTACTGGGAACAT...TGTGGTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTCCGCCCACAGGTCCCTaGGAGGGAGGGGCTAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPALPGPGLNWVAAGLSCPPTGP*EGGAKA Trigger: AGCCTTAGCCCCTCCCTCCAAGGGACCTGTGGGCGG...ACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | AACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTaGGCAACACTCCCTGGGCACACCGAGGGCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: NSRSSRPVPYSP*ATLPGHTEGHG Trigger: CCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | GCTCAAACGGGGAGCCAGGCTGCCTGGCCACTTGGCTaGAGCGAGCGGGCAAGCGAGCAGTGGCTTCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQTGSQAAWPLG*SERASEQWLLV Trigger: GACGAGAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | CCCCTGCGCAACACTCCCTGGGCACACCGAGGGCCATaGGCCTTTCCCCTGAGAGTGTGGGACCCAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLRNTPWAHRGP*AFPLRVWDPRV Trigger: CACCCTTGGGTCCCACACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | TGGAGCTCAAACGGGGAGCCAGGCTGCCTGGCCACTTaGCTGCAGCGAGCGGGCAAGCGAGCAGTGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: WSSNGEPGCLAT*LQRAGKRAVAS Trigger: AGAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | AGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTaGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RREGSRKTTCPP*PRAQLGCCWPL Trigger: GAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCACACCGGGGTGCTCCGTCACATaGACAGTGACCCTGGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GAVGRSPTAPAQHSLGTPGCSVT*TVTLGN Trigger: ATTGCCCAGGGTCACTGTCAATGTGACGGAGCACCC...CGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | GCTGACAGAACATGGAGCTCAAACGGGGAGCCAGGCTaGCTGGCCACTTGGCTGCAGCGAGCGGGCAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: ADRTWSSNGEPG*LATWLQRAGKR Trigger: TCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | CGGGACCCAGTGCTCTGTGACCCAGGGTCCTGGCTCTaGCAGGGTAGCAGAAAAGTGCCACCCGCGTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: RDPVLCDPGSWL*QGSRKVPPASR Trigger: TCGTGACGCGGGTGGCACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGGGTCACAGAGCACTGGGTCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | ACCCAGGGTCCTGGCTCTGGCAGGGTAGCAGAAAAGTaGCACCCGCGTCACGATTCAGGCTCCGGTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: TQGPGSGRVAEK*HPRHDSGSGGI Trigger: GATGCCACCGGAGCCTGAATCGTGACGCGGGTGGCACTTTTCTGCTACCCTGCCAGAGCCAGGACCCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGACAGTCCCTTGGCTaGGAGTCTCAGAGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QPLRNTPWAHRGPWAFPLRQSLG*ESQRLL Trigger: AAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCT...CAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAAGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCGGGGCCTGGGCTTGTaGGGGAGCAAGGATGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LQRLRLQKGRVTEDHLPSRGLGL*GSKDVT Trigger: GGTGACATCCTTGCTCCCCAACAAGCCCAGGCCCCG...GGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCTTTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | TGGCCACTTGGCTGCAGCGAGCGGGCAAGCGAGCAGTaGCTTCTCGTCTTCCCAAGGTTTGCTGGTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPLGCSERASEQ*LLVFPRFAGEG Trigger: TCCCTCACCAGCAAACCTTGGGAAGACGAGAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | GAGTGTGGGACCCAAGGGTGTGGGCAGCAAAGGTGCTaGGTACCACCCAAGGTTACGGGGCCTGGGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ECGTQGCGQQRC*VPPKVTGPGLV Trigger: AACAAGCCCAGGCCCCGTAACCTTGGGTGGTACCCAGCACCTTTGCTGCCCACACCCTTGGGTCCCACACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | TGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTaGCCTCTCCTGTTAGGTTTGAGATATGACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPPWPRAQLGCC*PLLLGLRYDPG Trigger: GCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR TCA 72 bp | GCCTGTCCCCTCTGCTCACAGGGTTTGGGAGGGACCTaGGGCAAGGACAAGCTCTTTGGGCTTGCTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: ACPLCSQGLGGT*GKDKLFGLAAW Trigger: CCATGCAGCAAGCCCAAAGAGCTTGTCCTTGCCTCAGGTCCCTCCCAAACCCTGTGAGCAGAGGGGACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | ACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTaGTGGCCTCTCCTGTTAGGTTTGAGATATGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TCPPWPRAQLGC*WPLLLGLRYDP Trigger: TGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | CTGGGTACCACCCAAGGTTACGGGGCCTGGGCTTGTTaGGGAGCAAGGATGTCACCCACCTTCTTGGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGTTQGYGAWAC*GARMSPTFLAC Trigger: ACAGGCCAAGAAGGTGGGTGACATCCTTGCTCCCCAACAAGCCCAGGCCCCGTAACCTTGGGTGGTACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCGAAGCCAGCAGTGTGGCCAGGGCCTCCTACAGACAGCATCTGCATGGTTTCGTCTTCCCAAGGTTaGCTGGTGAGGGAGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LAKPAVWPGPPTDSICMVSSSQG*LVREAG Trigger: TCCTGCCTCCCTCACCAGCAAACCTTGGGAAGACGA...AACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCCATGTTCCCAGTAGGTaGCCACATGAGCTCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPHVPSR*PHELFH Trigger: GTGGAAGAGCTCATGTGGCAACCTACTGGGAACATG...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | GATATGACCCAGGCTGTCCTAGGGAAGCCAGCCTACTaGCGAGGGCTGGGGTATAGCTTGTCTCTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DMTQAVLGKPAY*RGLGYSLSLSA Trigger: GGCAGAGAGAGACAAGCTATACCCCAGCCCTCGGCAGTAGGCTGGCTTCCCTAGGACAGCCTGGGTCATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | GGCTTGGAGTCTCAGAGGCTTCTTGCTGACAGAACATaGAGCTCAAACGGGGAGCCAGGCTGCCTGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GLESQRLLADRT*SSNGEPGCLAT Trigger: AGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGACAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTAGTCTCAGAGGCTTCTaGCTGACAGAACATGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVTGNPELPASHGHTGPSSLRGF*LTEHGA Trigger: AGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACT...ACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTGTCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CCA 72 bp | GGGGTGCTCCGTCACATTGACAGTGACCCTGGGCAATaGCCCAGTTCTACCTGCCCATTGAGAATGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GVLRHIDSDPGQ*PSSTCPLRMLS Trigger: GCTCAGCATTCTCAATGGGCAGGTAGAACTGGGCCATTGCCCAGGGTCACTGTCAATGTGACGGAGCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | GGACAGCTGATGGGTGTGGATGTAAATACACGGAACTaGCGAAGCCAGCAGTGTGGCCAGGGCCTCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: GQLMGVDVNTRN*RSQQCGQGLLQ Trigger: CTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCCACACCCATCAGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR TCA 72 bp | ACAGTCCCTTGGCTTGGAGTCTCAGAGGCTTCTTGCTaGCAGAACATGGAGCTCAAACGGGGAGCCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPWLGVSEASC*QNMELKRGARL Trigger: CAGCCTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR TCA 72 bp | CTGTTGATCGCAAATGAAGATGTGCTCAGCAGATTCTaGCTCCGGGGAAGGCCAGGCCACCCTAGATGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLIANEDVLSRF*LRGRPGHPRWG Trigger: GCCCCATCTAGGGTGGCCTGGCCTTCCCCGGAGTCAGAATCTGCTGAGCACATCTTCATTTGCGATCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | CCAGCAGTGTGGCCAGGGCCTCCTACAGACAGCATCTaGATGGTTCACAAAAGCACCTCACTCTCCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PAVWPGPPTDSI*MVHKSTSLSSN Trigger: GTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAGAAGACCGGCCCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAAAAGGTCACTTTGTCTaGAAACACTGGCGCGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YRRPAQGRNQALQPLPKAKGHFV*KHWRVA Trigger: AGCCACGCGCCAGTGTTTCAAGACAAAGTGACCTTT...TGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGGGCCGGTCTTCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR TCA 72 bp | AAGCCTGGCATTGGTGAGGAGACGTCACTGAAGGAGTaGATACTAACGAGGAGAAGCTGGCTTCGGGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KPGIGEETSLKE*ILTRRSWLRGG Trigger: GCCACCCCGAAGCCAGCTTCTCCTCGTTAGTATTCACTCCTTCAGTGACGTCTCCTCACCAATGCCAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR GCA 72 bp | ATTGACAGTGACCCTGGGCAATGGCCCAGTTCTACCTaGCCATTGAGAATGCTGAGCCTGGCTCAGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: IDSDPGQWPSST*PLRMLSLAQTL Trigger: GAGTGTCTGAGCCAGGCTCAGCATTCTCAATGGGCAGGTAGAACTGGGCCATTGCCCAGGGTCACTGTCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | TCCTATGTACAATTCACCACGGAGAAAGACGGTGGCTaGGCCGGAGTTTCTGCCAGGTCTAAGGCCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SYVQFTTEKDGG*AGVSARSKASD Trigger: GTCTGAGGCCTTAGACCTGGCAGAAACTCCGGCCCAGCCACCGTCTTTCTCCGTGGTGAATTGTACATAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | CCAAGAGCAGGCTACCTCCCAGACAGTCCCTTGGCTTaGAGTCTCAGAGGCTTCTTGCTGACAGAACATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PRAGYLPDSPLA*SLRGFLLTEHG Trigger: TCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCTGGGAGGTAGCCTGCTCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | GGATGTAAATACACGGAACTGGCGAAGCCAGCAGTGTaGCCAGGGCCTCCTACAGACAGCATCTGCATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GCKYTELAKPAV*PGPPTDSICMV Trigger: AACCATGCAGATGCTGTCTGTAGGAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGAGGCTGCCTGGCCACTaGGCTGCAGCGAGCGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: YLNIILRFLGFKEPGRVLRLPGH*AAASGQ Trigger: TTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCT...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CAA 90 bp | CTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCACCAACAGCAAGGACAAGCTCTTaGGGCTTGCTGCATGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSIDHPAAPRKSFPVPPTARTSS*GLLHGA Trigger: AGCCCCATGCAGCAAGCCCAAAGAGCTTGTCCTTGC...TGTTGGTGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CCA 72 bp | AGAAAAGTGCCACCCGCGTCACGATTCAGGCTCCGGTaGCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKVPPASRFRLR*HLSSVRDRELE Trigger: TTCTAACTCTCTGTCCCTTACACTGGACAGATGCCACCGGAGCCTGAATCGTGACGCGGGTGGCACTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 72 bp | TTGGGCTTGCTGCATGGGGCTCTAAGTACCATTGCGTaGGGACAGCTGATGGGTGTGGATGTAAATACACGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLLHGALSTIA*GQLMGVDVNTR Trigger: CCGTGTATTTACATCCACACCCATCAGCTGTCCTCACGCAATGGTACTTAGAGCCCCATGCAGCAAGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR TCA 72 bp | CTGAACTGTCCTGATACAAATGTGACTGGGACTCTCTaGCTTGGCTCCCACCTTGTGTGGGCCACATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNCPDTNVTGTL*LGSHLVWATYL Trigger: GAGGTATGTGGCCCACACAAGGTGGGAGCCAAGTCAGAGAGTCCCAGTCACATTTGTATCAGGACAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGCTCCCAGACAGTCCCTaGGCTTGGAGTCTCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YLNIILRFLGFKEPGRVLLPDSP*AWSLRG Trigger: GCCTCTGAGACTCCAAGCCAAGGGACTGTCTGGGAG...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 72 bp | AGCCTGGCTCAGACACTCTCCAGGACTTTCCTATGTTaGTGTAAACCAGAAAAGGAAGCCTGGCAGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLAQTLSRTFLC*CKPEKEAWQER Trigger: TCTCTCCTGCCAGGCTTCCTTTTCTGGTTTACAGCAACATAGGAAAGTCCTGGAGAGTGTCTGAGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 72 bp | CTCTTTGGGCTTGCTGCATGGGGCTCTAAGTACCATTaGGTGAGGACAGCTGATGGGTGTGGATGTAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LFGLAAWGSKYH*VRTADGCGCKY Trigger: GTATTTACATCCACACCCATCAGCTGTCCTCACGCAATGGTACTTAGAGCCCCATGCAGCAAGCCCAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACACAGCAGATTAAAGCCAGAACCAGGCATGCCCCCATCCTTCCCAAGGAAAGAGAGTTAGAATACTaGTTGAGGGACCTTCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: ATQQIKARTRHAPILPKERELEY*LRDLLP Trigger: TGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCT...TTCCTTGGGAAGGATGGGGGCATGCCTGGTTCTGGCTTTAATCTGCTGTGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CAA 90 bp | CAGACTCCAAGAGCTCTTACTTATTGCTTATTTCAGAGGTGGCTGAACTGTCCTATGTCACCCACCTTCTaGGCCTGTCCCCTCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTPRALTYCLFQRWLNCPMSPTF*ACPLCS Trigger: TGAGCAGAGGGGACAGGCCAAGAAGGTGGGTGACAT...AGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 72 bp | CCCACCTTGTGTGGGCCACATACCTCAACATTATTCTaGGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTLCGPHTSTLF*GFLASKNQEGS Trigger: AGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTATGTGGCCCACACAAGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR TCA 72 bp | AGGTCACTTTGTCTTGAAACACTGGCGCGTGGCTGTTaGTCGCAAATGAAGATGTGCTCAGCAGATTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSLCLETLARGC*SQMKMCSADSD Trigger: GTCAGAATCTGCTGAGCACATCTTCATTTGCGATCAACAGCCACGCGCCAGTGTTTCAAGACAAAGTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR-3UTR CAA 90 bp | CAGACTCCAAGAGCTCTTACTTATTGCTTATTTCAGAGGTGGCTGAACTGTCCTAGTTCTACCTGCCCATaGAGAATGCTGAGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTPRALTYCLFQRWLNCPSSTCP*RMLSLA Trigger: AGCCAGGCTCAGCATTCTCAATGGGCAGGTAGAACT...AGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR GCA 72 bp | CTTTCTTGTCTTCAGACTCCAAGAGCTCTTACTTATTaGTTATTTCAGAGGTGGCTGAACTGTCCTGATACA | + |
|
Preference number: 3 (lower is better) Translates to: LSCLQTPRALTY*LFQRWLNCPDT Trigger: TGTATCAGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTGAAGACAAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAGCCCCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGCGCAGCAGGGCCTCCTaGCGCGCCTCGAGCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLRNTPWAHRGPWAFPLRSRAS*RASSSR Trigger: ACGGGAGCTCGAGGCGCGCCAGGAGGCCCTGCTGCG...CAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | GGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCACACCGCGCCGCTGCCCGCACTaGACGTGCTGCTGCCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GAVGRSPTAPAQHSLGTPRRCPH*TCCCRR Trigger: GCGACGGCAGCAGCACGTCCAGTGCGGGCAGCGGCG...CGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | CCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTTGGCGTCCGAAGCGCTaGCACTCGCGCGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPALPGPGLNWVAAGLSCWRPKR*HSRASL Trigger: CAAGCTGGCGCGCGAGTGGCAGCGCTTCGGACGCCA...ACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | AGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCCGTCCGGAACCTTGTaGGGCCCCGGGGGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVTEDHLPSLAPGSTGLLPSGTL*GPGGSR Trigger: TCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGG...CAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | GGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCACACCGTCCTCGTCCGGGACCTaGCTCAGCTCCTCCGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAVGRSPTAPAQHSLGTPSSSGT*LSSSDA Trigger: GGCGTCGGAGGAGCTGAGCCAGGTCCCGGACGAGGA...CGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCGGGCAGCAGAGCCGCTaGGACGTGGTGGTGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAGAVGRSPTAPAQHSLGGQQSR*DVVVVV Trigger: GACCACCACCACCACGTCCCAGCGGCTCTGCTGCCC...GCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | CCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTAGCTCCCGTAGCTTCTaGTGCGAGCGGGCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPALPGPGLNWVAAGLSCSSRSF*CERATS Trigger: CGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCT...ACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAGCCCCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGACAGGTGCTGCCGGATaGAGGGCTTGGTGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLRNTPWAHRGPWAFPLTGAAG*RAWCWR Trigger: CCGCCAGCACCAAGCCCTCCATCCGGCAGCACCTGT...CAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGGGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGGGAGGGCGGCAGGGATaGGAGCTGGGATTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KGRVTEDHLPSLAPGSTGGGRQG*ELGFRM Trigger: CATTCGGAATCCCAGCTCGCATCCCTGCCGCCCTCC...CCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| 3UTR CAA 72 bp | ATGGAGCTCAAACGGGGAGCCAGGCTGCCTGGCCACTaGGCTGCAGCGAGCGGGCAAGCGAGCAGTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MELKRGARLPGH*AAASGQASSGF Trigger: GAAGCCACTGCTCGCTTGCCCGCTCGCTGCAGCCAAGTGGCCAGGCAGCCTGGCTCCCCGTTTGAGCTCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGAGTATCTCCAGCAGGTGCTaGTGCAGCCGCCGGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: PAQHSLGTPRAMGLSPESISSRC*CSRRFT Trigger: CGTGAACCGGCGGCTGCAGCAGCACCTGCTGGAGAT...ACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCGGATCTCCAGCAGGTaGTGCTGCAGCCGCCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRLQKGRVTEDHLPSLARISSR*CCSRRF Trigger: GAACCGGCGGCTGCAGCAGCACCTGCTGGAGATCCG...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAGCACGCTTTCCCCCTGCCCGCACTGGACGTaGTGCTGCCGTCGCCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGQKPGTPAPPKSSTLSPCPHWT*CCRRQR Trigger: ACGTTGGCGACGGCAGCAGCACGTCCAGTGCGGGCA...GGGGGAAAGCGTGCTGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCGTGTCCTATGTACAATTCACCACGGAGAAAGACGGTGGCTGGGCCGGAGGCCGCTGGGACGTGGTaGTGGTGGTCCGGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPMYNSPRRKTVAGPEAAGTW*WWSGLP Trigger: CGGCAGCCCGGACCACCACCACCACGTCCCAGCGGC...CTCCGGCCCAGCCACCGTCTTTCTCCGTGGTGAATTGTACATAGGACACGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCGCAACACTCCCTGGGCACACCGAGGGCCATGGGCCTTTCCCCTGAGAGTTTAGGGATGCTTCGGTaGTGCGGCGGCGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQHSLGTPRAMGLSPESLGMLR*CGGADR Trigger: CCTGTCAGCGCCGCCGCACCACCGAAGCATCCCTAA...ACTCTCAGGGGAAAGGCCCATGGCCCTCGGTGTGCCCAGGGAGTGTTGCGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTGGCCTCTCCTGTAGAACCTTCATGGCGTaGACGACAGCCTCGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPALPGPGLNWVAAGLSCRTFMA*TTASGF Trigger: GAAACCCGAGGCTGTCGTGCACGCCATGAAGGTTCT...ACAGGAGAGGCCAGCAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGACAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTTGGAGGGCTTGGTGCTaGCGGCGTCCCCCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTGNPELPASHGHTGPSWRAWC*RRPPVS Trigger: GGAAACTGGGGGACGCCGCCAGCACCAAGCCCTCCA...ACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTGTCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCCGGAGCAGTAGGCCGGTCCCCTACAGCCCCTGCGCAACACTCCCTGGGCTCCTCACAGCTGTCTTaGAGTTGCCGGTCAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAGAVGRSPTAPAQHSLGSSQLS*SCRSRF Trigger: GAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGA...GCCCAGGGAGTGTTGCGCAGGGGCTGTAGGGGACCGGCCTACTGCTCCGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGATGTAAATACACGGAACTGGCGAAGCCAGCAGTGTGGCCAGGGCCTCCGCATCAGGCCGCCGTaGTCCAGCATGAGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GVDVNTRNWRSQQCGQGLRIRPP*SSMRPT Trigger: GGTGGGCCTCATGCTGGAGCACGGCGGCCTGATGCG...GAGGCCCTGGCCACACTGCTGGCTTCGCCAGTTCCGTGTATTTACATCCACACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCAGCTTGCGCCCTTTCTaGCGGTCGTCGTCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRLQKGRVTEDHLPSLASLRPF*RSSSRK Trigger: TTTCCTGGACGACGACCGGCAGAAAGGGCGCAAGCT...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | GCTGGGTACCACCCAAGGTTACGGGGCCTGGGCTTGTaGGGGAGCAAGGATGTCACCCACCTTCTTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGYHPRLRGLGL*GSKDVTHLLGL Trigger: CAGGCCAAGAAGGTGGGTGACATCCTTGCTCCCCAACAAGCCCAGGCCCCGTAACCTTGGGTGGTACCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | TATAGAAGACCGGCCCAGGGCAGAAACCAGGCACTCCAGCCCCTCCCAAAAGCAAGCTCACGCAGCTCCTaGTTGTCGTCCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YRRPAQGRNQALQPLPKASSRSS*LSSCSR Trigger: GCGGCTGCAGGACGACAATCAGGAGCTGCGTGAGCT...TGCTTTTGGGAGGGGCTGGAGTGCCTGGTTTCTGCCCTGGGCCGGTCTTCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | AGGCCGTGTCCTATGTACAATTCACCACGGAGAAAGACGGTGGCTGGGCCGGAGTCGTCCTGCAGCCGCTaGTTCACGTCCTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPMYNSPRRKTVAGPESSCSR*FTSLRP Trigger: CGGCCTCAAGGACGTGAACCAGCGGCTGCAGGACGA...CTCCGGCCCAGCCACCGTCTTTCTCCGTGGTGAATTGTACATAGGACACGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCAGACGGTGGACGGGGGTaGGGGCAGCTCGGGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPDGGRG*GQLGYG Trigger: CCCGTACCCGAGCTGCCCTCACCCCCGTCCACCGTC...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | GCCACACAGCAGATTAAAGCCAGAACCAGGCATGCCCCCATCCTTCCCAAGGAATCCAGCAGGTGCTGCTaGAGCCGCCGGTTCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ATQQIKARTRHAPILPKESSRCC*SRRFTS Trigger: CGACGTGAACCGGCGGCTGCAGCAGCACCTGCTGGA...TTCCTTGGGAAGGATGGGGGCATGCCTGGTTCTGGCTTTAATCTGCTGTGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCAGCTGGGACGTGGTGGTaGTGGTCCGGGCTGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPAGTWW*WSGLPP Trigger: CGGCGGCAGCCCGGACCACCACCACCACGTCCCAGC...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | CTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCACCAACAGTGGTGCGGCGGCGCTaGCAGGTCATCCAGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LSIDHPAAPRKSFPVPPTVVRRR*QVIQRP Trigger: CGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCAC...TGTTGGTGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | CAGGTGACAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTAATGGCCCCTTGAACTaGTTACCAGACAGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTGNPELPASHGHTGPSNGPLN*LPDRCC Trigger: GCAGCACCTGTCTGGTAATCAGTTCAAGGGGCCATT...ACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTGTCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCACGCCGTGCTCCAGCATaGGGCCCACCTTCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPRRAPA*GPPSRP Trigger: AGGGCGAGAAGGTGGGCCTCATGCTGGAGCACGGCG...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CTACAGACAGCATCTGCATGGTTCACAAAAGCACCTCACTCTCCTCCAACCACAAGAGCCGCTGGGACGTaGTGGTGGTGGTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQTASAWFTKAPHSPPTTRAAGT*WWWSGL Trigger: CAGCCCGGACCACCACCACCACGTCCCAGCGGCTCT...TGTGGTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | GCATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTTGAGGGACCTTCTCCAGAGACCGGCGCGTaGCTCCGGCCTTGCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASVQCKGQRVRILVEGPSPETGA*LRPCRP Trigger: CGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGG...AGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAGGGAACCCTGAGCTCCCAGCCAGTCATGGACACACGGGACCCAGTGCTCTGTGGATTCCGAATGGTATaGGGAGAAGCCTTTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGTLSSQPVMDTRDPVLCGFRMV*GEAFPK Trigger: CTTCGGAAAGGCTTCTCCCCATACCATTCGGAATCC...ACAGAGCACTGGGTCCCGTGTGTCCATGACTGGCTGGGAGCTCAGGGTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | AGTGACCCTGGGCAATGGCCCAGTTCTACCTGCCCATaGAGAATGCTGAGCCTGGCTCAGACACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPGQWPSSTCP*RMLSLAQTLSR Trigger: CCTGGAGAGTGTCTGAGCCAGGCTCAGCATTCTCAATGGGCAGGTAGAACTGGGCCATTGCCCAGGGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | CTACAGACAGCATCTGCATGGTTCACAAAAGCACCTCACTCTCCTCCAACCACAACTCGCGCGCCAGCTTaGGCCCTTTCTGCCGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQTASAWFTKAPHSPPTTTRAPA*ALSAGR Trigger: ACGACCGGCAGAAAGGGCGCAAGCTGGCGCGCGAGT...TGTGGTTGGAGGAGAGTGAGGTGCTTTTGTGAACCATGCAGATGCTGTCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CTGTCACAGTGGGGACGGGGGTGGAGCCAGCACAAGCATATTGTGAGCTTGGGGAGCTGGGATTCCGAATaGTATGGGGAGAAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQWGRGWSQHKHIVSLGSWDSE*YGEKPF Trigger: GAAAGGCTTCTCCCCATACCATTCGGAATCCCAGCT...CCCCAAGCTCACAATATGCTTGTGCTGGCTCCACCCCCGTCCCCACTGTGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | CCAGACAGTCCCTTGGCTTGGAGTCTCAGAGGCTTCTaGCTGACAGAACATGGAGCTCAAACGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDSPLAWSLRGF*LTEHGAQTGSQ Trigger: CTGGCTCCCCGTTTGAGCTCCATGTTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | AGGGTTTGGGAGGGACCTGAGGCAAGGACAAGCTCTTaGGGCTTGCTGCATGGGGCTCTAAGTACCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVWEGPEARTSS*GLLHGALSTIA Trigger: CGCAATGGTACTTAGAGCCCCATGCAGCAAGCCCAAAGAGCTTGTCCTTGCCTCAGGTCCCTCCCAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | GCTCAACTGGGTTGCTGCTGGCCTCTCCTGTTAGGTTaGAGATATGACCCAGGCTGTCCTAGGGAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQLGCCWPLLLG*RYDPGCPREAS Trigger: GCTGGCTTCCCTAGGACAGCCTGGGTCATATCTCAAACCTAACAGGAGAGGCCAGCAGCAACCCAGTTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAGACTCCAAGAGCTCTTACTTATTGCTTATTTCAGAGGTGGCTGAACTGTCCTGCCGGATGGAGGGCTTaGTGCTGGCGGCGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTPRALTYCLFQRWLNCPAGWRA*CWRRPP Trigger: TGGGGGACGCCGCCAGCACCAAGCCCTCCATCCGGC...AGGACAGTTCAGCCACCTCTGAAATAAGCAATAAGTAAGAGCTCTTGGAGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | GCTGGGGCCGGCAGATGGAGTTGCAAGTTCTATCGATaGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGAGRWSCKFYR*TIQQLLERASQ Trigger: CTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTGCAACTCCATCTGCCGGCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | CTTCTACCAAGAGCAGGCTACCTCCCAGACAGTCCCTaGGCTTGGAGTCTCAGAGGCTTCTTGCTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPRAGYLPDSP*AWSLRGFLLTE Trigger: TTCTGTCAGCAAGAAGCCTCTGAGACTCCAAGCCAAGGGACTGTCTGGGAGGTAGCCTGCTCTTGGTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR GCA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGTCCCGTAGCTTCTGCTaGGAGCGGGCCACCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLNIILRFLGFKEPGRVLSRSFC*ERATSC Trigger: GCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGA...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTCTATCGATTGACCATCCAGCAGCTCCTAGAAAGAGCTTCCCAGTGCCACTTCCAGAACCTTCATaGCGTGCACGACAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLSIDHPAAPRKSFPVPLPEPS*RARQPR Trigger: CCGAGGCTGTCGTGCACGCCATGAAGGTTCTGGAAG...TGGCACTGGGAAGCTCTTTCTAGGAGCTGCTGGATGGTCAATCGATAGAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTTGAGGGACCTTCTACCAAGAGCTGGTTCACGTCCTTaGGGCCGCGGATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRDRELEYLLRDLLPRAGSRP*GRGSPA Trigger: TGCTGGAGATCCGCGGCCTCAAGGACGTGAACCAGC...TCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | CTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTaGAGGGACCTTCTACCAAGAGCAGGCTACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSVRDRELEYL*RDLLPRAGYLP Trigger: TGGGAGGTAGCCTGCTCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | CATCTGTCCAGTGTAAGGGACAGAGAGTTAGAATACTaGTTGAGGGACCTTCTACCAAGAGCAGGCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSVRDRELEY*LRDLLPRAGYL Trigger: GAGGTAGCCTGCTCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGACAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| 3UTR CAA 72 bp | CCTGGATGCCCTGCAGCACTAGGGACAGGATCTTTCTaGTCTTCAGACTCCAAGAGCTCTTACTTATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGCPAALGTGSF*SSDSKSSYLLL Trigger: AAGCAATAAGTAAGAGCTCTTGGAGTCTGAAGACAAGAAAGATCCTGTCCCTAGTGCTGCAGGGCATCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS-3UTR CCA 90 bp | TACCTCAACATTATTCTGCGGTTTCTTGGCTTCAAAGAACCAGGAAGGGTCTTGACATCTCTCGCACGATaGCCTTCTCCTTCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLNIILRFLGFKEPGRVLTSLAR*PSPSRS Trigger: TGAGCGAGAAGGAGAAGGCCATCGTGCGAGAGATGT...CAAGACCCTTCCTGGTTCTTTGAAGCCAAGAAACCGCAGAATAATGTTGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS GCA 90 bp | CGCAGCAGGGCCTCCTGGCGCGCCTCGAGCTCCCGTAGCTTCTGCTaGGAGCGGGCCACCTCGTGCCACACGGCGCCGGCCGCGTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRASWRASSSRSFC*ERATSCHTAPAAWR Trigger: ACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGCCCTGCTGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 90 bp | TCGCGCAGCAGGGCCTCCTGGCGCGCCTCGAGCTCCCGTAGCTTCTaGTGCGAGCGGGCCACCTCGTGCCACACGGCGCCGGCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSRASWRASSSRSF*CERATSCHTAPAAW Trigger: CCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGCCCTGCTGCGCGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 90 bp | GCCACCTCGTGCCACACGGCGCCGGCCGCGTGGCGTCCGAAGCGCTaGCACTCGCGCGCCAGCTTGCGCCCTTTCTGCCGGTCGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATSCHTAPAAWRPKR*HSRASLRPFCRSSS Trigger: GGACGACGACCGGCAGAAAGGGCGCAAGCTGGCGCGCGAGTGGCAGCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 90 bp | CGCGCCTCGAGCTCCCGTAGCTTCTGCTGCGAGCGGGCCACCTCGTaGCACACGGCGCCGGCCGCGTGGCGTCCGAAGCGCTGCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RASSSRSFCCERATS*HTAPAAWRPKRCHS Trigger: CGAGTGGCAGCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | TCCGGAACCTTGTGCGGCCCCGGGGGCAGCAGAGCCGCTGGGACGTaGTGGTGGTGGTCCGGGCTGCCGCCGCTGCCCGCACTGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTLCGPGGSRAAGT*WWWSGLPPLPALDV Trigger: CACGTCCAGTGCGGGCAGCGGCGGCAGCCCGGACCACCACCACCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | CTTGCCGTCCGGAACCTTGTGCGGCCCCGGGGGCAGCAGAGCCGCTaGGACGTGGTGGTGGTGGTCCGGGCTGCCGCCGCTGCCCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LAVRNLVRPRGQQSR*DVVVVVRAAAAART Trigger: AGTGCGGGCAGCGGCGGCAGCCCGGACCACCACCACCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 90 bp | TCCAGAGACCGGCGCGTGGCTCCGGCCTTGCCGTCCGGAACCTTGTaGGGCCCCGGGGGCAGCAGAGCCGCTGGGACGTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRDRRVAPALPSGTL*GPGGSRAAGTWWWW Trigger: CCACCACCACCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 90 bp | GCGGCGCTGACAGGTCATCCAGAGACCGGCGCGTGGCTCCGGCCTTaGCGTCCGGAACCTTGTGCGGCCCCGGGGGCAGCAGAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AALTGHPETGAWLRP*RPEPCAAPGAAEPL Trigger: CAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | TTCTGCTGCGAGCGGGCCACCTCGTGCCACACGGCGCCGGCCGCGTaGCGTCCGAAGCGCTGCCACTCGCGCGCCAGCTTGCGCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCCERATSCHTAPAA*RPKRCHSRASLRPF Trigger: GAAAGGGCGCAAGCTGGCGCGCGAGTGGCAGCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | TTCGGTGGTGCGGCGGCGCTGACAGGTCATCCAGAGACCGGCGCGTaGCTCCGGCCTTGCCGTCCGGAACCTTGTGCGGCCCCGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FGGAAALTGHPETGA*LRPCRPEPCAAPGA Trigger: TGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCACCGAA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS TCA 90 bp | GGGATCGTGCAGGCCGTTAGGGATGCTTCGGTGGTGCGGCGGCGCTaGCAGGTCATCCAGAGACCGGCGCGTGGCTCCGGCCTTGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GIVQAVRDASVVRRR*QVIQRPARGSGLAV Trigger: GACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCACCGAAGCATCCCTAACGGCCTGCACGATCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | AGCACCAGCTCTTTCAGCTCCAGGTTCTCGCGCAGCAGGGCCTCCTaGCGCGCCTCGAGCTCCCGTAGCTTCTGCTGCGAGCGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: STSSFSSRFSRSRAS*RASSSRSFCCERAT Trigger: GGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGCCCTGCTGCGCGAGAACCTGGAGCTGAAAGAGCTGGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS-3UTR CAA 90 bp | AGGCTAAGGCTCCAGAAGGGAAGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCACTCGCGCGCCAGCTaGCGCCCTTTCTGCCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLRLQKGRVTEDHLPSLAHSRAS*RPFCRS Trigger: CGACCGGCAGAAAGGGCGCAAGCTGGCGCGCGAGTG...GGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCTTCCCTTCTGGAGCCTTAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACGGAAGACCACCTGCCCTCCCTGGCCCCGGGCTCAACTGGGTTGCTGCTCCTCACAGCTGTCTaGAAGTTGCCGGTCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RVTEDHLPSLAPGSTGLLLLTAV*KLPVKV Trigger: AACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAG...CAGCAACCCAGTTGAGCCCGGGGCCAGGGAGGGCAGGTGGTCTTCCGTGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
||
| CDS CCA 90 bp | TTGGTAGGAGGGCGGCAGGGATGCGAGCTGGGATTCCGAATGGTATaGGGAGAAGCCTTTCCGAAGGGTACGGAATTCTCCAGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVGGRQGCELGFRMV*GEAFPKGTEFSRAC Trigger: GCAGGCTCTGGAGAATTCCGTACCCTTCGGAAAGGCTTCTCCCCATACCATTCGGAATCCCAGCTCGCATCCCTGCCGCCCTCCTACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | CGTCCCCCAGTTTCCTCCAGACCACGTTGCACATCTCTCGCACGATaGCCTTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPPVSSRPRCTSLAR*PSPSRSGPPHSCLE Trigger: TTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAAGGCCATCGTGCGAGAGATGTGCAACGTGGTCTGGAGGAAACTGGGGGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 90 bp | CTTGAAGTTGCCGGTCAAGGTTCTCATGTACTTCCAGAACCTTCATaGCGTGCACGACAGCCTCGGGTTTCTGTCCTGCCGAACTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LEVAGQGSHVLPEPS*RARQPRVSVLPNCR Trigger: TCTACAGTTCGGCAGGACAGAAACCCGAGGCTGTCGTGCACGCCATGAAGGTTCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTAAGGGACAGAGAGTTAGAATACTTGTTGAGGGACCTTCTACCAAGACGCTGGTTCACGTCCTaGAGGCCGCGGATCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSVRDRELEYLLRDLLPRRWFTS*RPRISS Trigger: GCTGGAGATCCGCGGCCTCAAGGACGTGAACCAGCG...TCTTGGTAGAAGGTCCCTCAACAAGTATTCTAACTCTCTGTCCCTTACACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222310.2 |
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| CDS TCA 90 bp | ACGATGGCCTTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTTaGAGTTGCCGGTCAAGGTTCTCATGTACTTCCAGAACCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: TMAFSFSLRSSSQLS*SCRSRFSCTSRTFM Trigger: CATGAAGGTTCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAAGGCCATCGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | TGCGGCCCCGGGGGCAGCAGAGCCGCTGGGACGTGGTaGTGGTGGTCCGGGCTGCCGCCGCTGCCCGCACTG | + |
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Preference number: 6 (lower is better) Translates to: CGPGGSRAAGTW*WWSGLPPLPAL Trigger: CAGTGCGGGCAGCGGCGGCAGCCCGGACCACCACCACCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | CGGCGCGTGGCTCCGGCCTTGCCGTCCGGAACCTTGTaGGGCCCCGGGGGCAGCAGAGCCGCTGGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: RRVAPALPSGTL*GPGGSRAAGTW Trigger: CCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | GAGCGGGCCACCTCGTGCCACACGGCGCCGGCCGCGTaGCGTCCGAAGCGCTGCCACTCGCGCGCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ERATSCHTAPAA*RPKRCHSRASL Trigger: CAAGCTGGCGCGCGAGTGGCAGCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | TTGTGCGGCCCCGGGGGCAGCAGAGCCGCTGGGACGTaGTGGTGGTGGTCCGGGCTGCCGCCGCTGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LCGPGGSRAAGT*WWWSGLPPLPA Trigger: TGCGGGCAGCGGCGGCAGCCCGGACCACCACCACCACGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 72 bp | GACCGGCGCGTGGCTCCGGCCTTGCCGTCCGGAACCTaGTGCGGCCCCGGGGGCAGCAGAGCCGCTGGGACG | + |
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Preference number: 6 (lower is better) Translates to: DRRVAPALPSGT*CGPGGSRAAGT Trigger: CGTCCCAGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | TGCCACACGGCGCCGGCCGCGTGGCGTCCGAAGCGCTaGCACTCGCGCGCCAGCTTGCGCCCTTTCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: CHTAPAAWRPKR*HSRASLRPFCR Trigger: CCGGCAGAAAGGGCGCAAGCTGGCGCGCGAGTGGCAGCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | GCCTCCTGGCGCGCCTCGAGCTCCCGTAGCTTCTGCTaGGAGCGGGCCACCTCGTGCCACACGGCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ASWRASSSRSFC*ERATSCHTAPA Trigger: GGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | AGCTCCCGTAGCTTCTGCTGCGAGCGGGCCACCTCGTaGCACACGGCGCCGGCCGCGTGGCGTCCGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSRSFCCERATS*HTAPAAWRPKR Trigger: GCGCTTCGGACGCCACGCGGCCGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | AGGGCCTCCTGGCGCGCCTCGAGCTCCCGTAGCTTCTaGTGCGAGCGGGCCACCTCGTGCCACACGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: RASWRASSSRSF*CERATSCHTAP Trigger: CGGCGCCGTGTGGCACGAGGTGGCCCGCTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGCCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 90 bp | GGCGGCGCTGACAGGTCATCCAGAGACCGGCGCGTGGCTCCGGCCTaGCCGTCCGGAACCTTGTGCGGCCCCGGGGGCAGCAGAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GGADRSSRDRRVAPA*PSGTLCGPGGSRAA Trigger: AGCGGCTCTGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | GCGGCGGCGCTGACAGGTCATCCAGAGACCGGCGCGTaGCTCCGGCCTTGCCGTCCGGAACCTTGTGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: AAALTGHPETGA*LRPCRPEPCAA Trigger: GGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGCCGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 72 bp | GACAGGTCATCCAGAGACCGGCGCGTGGCTCCGGCCTaGCCGTCCGGAACCTTGTGCGGCCCCGGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DRSSRDRRVAPA*PSGTLCGPGGS Trigger: GCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | TGCAGCCGCCGGTTCACGTCGCGCATCAGGCCGCCGTaGTCCAGCATGAGGCCCACCTTCTCGCCCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: CSRRFTSRIRPP*SSMRPTFSPSA Trigger: CGCCGAGGGCGAGAAGGTGGGCCTCATGCTGGAGCACGGCGGCCTGATGCGCGACGTGAACCGGCGGCTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | ACAGGTCATCCAGAGACCGGCGCGTGGCTCCGGCCTTaGCGTCCGGAACCTTGTGCGGCCCCGGGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGHPETGAWLRP*RPEPCAAPGAA Trigger: TGCTGCCCCCGGGGCCGCACAAGGTTCCGGACGGCAAGGCCGGAGCCACGCGCCGGTCTCTGGATGACCTGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS TCA 72 bp | CAGGCCGTTAGGGATGCTTCGGTGGTGCGGCGGCGCTaGCAGGTCATCCAGAGACCGGCGCGTGGCTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: QAVRDASVVRRR*QVIQRPARGSG Trigger: GCCGGAGCCACGCGCCGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCACCGAAGCATCCCTAACGGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | GAGGGATCGTGCAGGCCGTTAGGGATGCTTCGGTGGTaGGGCGGCGCTGACAGGTCATCCAGAGACCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: EGSCRPLGMLRW*GGADRSSRDRR Trigger: GCGCCGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCACCGAAGCATCCCTAACGGCCTGCACGATCCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | TCTTTCAGCTCCAGGTTCTCGCGCAGCAGGGCCTCCTaGCGCGCCTCGAGCTCCCGTAGCTTCTGCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SFSSRFSRSRAS*RASSSRSFCCE Trigger: CTCGCAGCAGAAGCTACGGGAGCTCGAGGCGCGCCAGGAGGCCCTGCTGCGCGAGAACCTGGAGCTGAAAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | GACGAGGGATCGTGCAGGCCGTTAGGGATGCTTCGGTaGTGCGGCGGCGCTGACAGGTCATCCAGAGACCGG | + |
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Preference number: 6 (lower is better) Translates to: DEGSCRPLGMLR*CGGADRSSRDR Trigger: CCGGTCTCTGGATGACCTGTCAGCGCCGCCGCACCACCGAAGCATCCCTAACGGCCTGCACGATCCCTCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | TACCAGACAGGTGCTGCCGGATGGAGGGCTTGGTGCTaGCGGCGTCCCCCAGTTTCCTCCAGACCACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: YQTGAAGWRAWC*RRPPVSSRPRC Trigger: GCAACGTGGTCTGGAGGAAACTGGGGGACGCCGCCAGCACCAAGCCCTCCATCCGGCAGCACCTGTCTGGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | GATTACCAGACAGGTGCTGCCGGATGGAGGGCTTGGTaGTGGCGGCGTCCCCCAGTTTCCTCCAGACCACGT | + |
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Preference number: 6 (lower is better) Translates to: DYQTGAAGWRAW*WRRPPVSSRPR Trigger: ACGTGGTCTGGAGGAAACTGGGGGACGCCGCCAGCACCAAGCCCTCCATCCGGCAGCACCTGTCTGGTAATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | ACTGATTACCAGACAGGTGCTGCCGGATGGAGGGCTTaGTGCTGGCGGCGTCCCCCAGTTTCCTCCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: TDYQTGAAGWRA*CWRRPPVSSRP Trigger: TGGTCTGGAGGAAACTGGGGGACGCCGCCAGCACCAAGCCCTCCATCCGGCAGCACCTGTCTGGTAATCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | GAAGCCTTTCCGAAGGGTACGGAATTCTCCAGAGCCTaGCTGCTGGAGCTGGCTTCTCTGGCAGCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: EAFPKGTEFSRA*LLELASLAAVG Trigger: CCCCACAGCTGCCAGAGAAGCCAGCTCCAGCAGGCAGGCTCTGGAGAATTCCGTACCCTTCGGAAAGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136175.3 |
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| CDS CCA 72 bp | GGGCGGCAGGGATGCGAGCTGGGATTCCGAATGGTATaGGGAGAAGCCTTTCCGAAGGGTACGGAATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GRQGCELGFRMV*GEAFPKGTEFS Trigger: GGAGAATTCCGTACCCTTCGGAAAGGCTTCTCCCCATACCATTCGGAATCCCAGCTCGCATCCCTGCCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | GCCGGTCAAGGTTCTCATGTACTTCCAGAACCTTCATaGCGTGCACGACAGCCTCGGGTTTCTGTCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: AGQGSHVLPEPS*RARQPRVSVLP Trigger: CGGCAGGACAGAAACCCGAGGCTGTCGTGCACGCCATGAAGGTTCTGGAAGTACATGAGAACCTTGACCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CCA 72 bp | GTTTCCTCCAGACCACGTTGCACATCTCTCGCACGATaGCCTTCTCCTTCTCGCTCAGGTCCTCCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: VSSRPRCTSLAR*PSPSRSGPPHS Trigger: GCTGTGAGGAGGACCTGAGCGAGAAGGAGAAGGCCATCGTGCGAGAGATGTGCAACGTGGTCTGGAGGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 90 bp | GGCCTTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTTGAAGTaGCCGGTCAAGGTTCTCATGTACTTCCAGAACCTTCATGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GLLLLAQVLLTAVLK*PVKVLMYFQNLHGV Trigger: CACGCCATGAAGGTTCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAAGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS GCA 72 bp | TCAAGGTTCTCATGTACTTCCAGAACCTTCATGGCGTaGACGACAGCCTCGGGTTTCTGTCCTGCCGAACTG | + |
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Preference number: 6 (lower is better) Translates to: SRFSCTSRTFMA*TTASGFCPAEL Trigger: CAGTTCGGCAGGACAGAAACCCGAGGCTGTCGTGCACGCCATGAAGGTTCTGGAAGTACATGAGAACCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 72 bp | CTTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTaGAAGTTGCCGGTCAAGGTTCTCATGTACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLLAQVLLTAV*KLPVKVLMYFQ Trigger: CTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 90 bp | CACGATGGCCTTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTaGAAGTTGCCGGTCAAGGTTCTCATGTACTTCCAGAACCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HDGLLLLAQVLLTAV*KLPVKVLMYFQNLH Trigger: ATGAAGGTTCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAAGGCCATCGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS TCA 72 bp | TTCTCCTTCTCGCTCAGGTCCTCCTCACAGCTGTCTTaGAGTTGCCGGTCAAGGTTCTCATGTACTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FSFSLRSSSQLS*SCRSRFSCTSR Trigger: TCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAGGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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| CDS CAA 72 bp | CTTCTCGCTCAGGTCCTCCTCACAGCTGTCTTGAAGTaGCCGGTCAAGGTTCTCATGTACTTCCAGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LLAQVLLTAVLK*PVKVLMYFQNL Trigger: AAGGTTCTGGAAGTACATGAGAACCTTGACCGGCAACTTCAAGACAGCTGTGAGGAGGACCTGAGCGAGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136175.3 ENSMUST00000222310.2 |
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