Pregenerated sensors for CCDC85A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032878Ensembl transcript IDs: ENSMUST00000042534.15, ENSMUST00000093253.10, ENSMUST00000109502.9, ENSMUST00000140601.3, ENSMUST00000146385.9, ENSMUST00000160016.8
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGAAGATGTAGCAGCAGGAAATTGACTGCATCATATAGAGTCTaGGAATTAATGGAAGGATTGGGGGTAGTTTGTTTCAGATCAAGT | + |
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Preference number: 1 (lower is better) Translates to: EGRCSSRKLTASYRV*ELMEGLGVVCFRSS Trigger: ACTTGATCTGAAACAAACTACCCCCAATCCTTCCATTAATTCTCAGACTCTATATGATGCAGTCAATTTCCTGCTGCTACATCTTCCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR CAA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTaGAGAATCCCGAAGAACCATGGTTGGCTAGCCCAAAATTGTATG | + |
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Preference number: 2 (lower is better) Translates to: GSFCQDLRYYSSLYV*RIPKNHGWLAQNCM Trigger: CATACAATTTTGGGCTAGCCAACCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCCTTTGTATCGCTACTaGAGGATCTACTGCAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: WYNAQHRKPHFTILLATSPLYRY*RIYCKH Trigger: GTGCTTGCAGTAGATCCTGCAGTAGCGATACAAAGG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR CAA 90 bp | AAAAATAAAGGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTaGTATGTCTTGAGAATCCCGAAGAACCATGGTTGGCTAGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KNKGSFCQDLRYYSS*YVLRIPKNHGWLAQ Trigger: TTGGGCTAGCCAACCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCCTTTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTTTAGAAGGGAGATATaGGCAATGTACAATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: EGASQPRLYAQKYFFISSFRREI*AMYNHS Trigger: GGAGTGATTGTACATTGCTCATATCTCCCTTCTAAA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATACATCTCAAGCAATCTaGAAAGAGTATTTAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PRFASFAFRWREDVAAGNTSQAI*KEYLAS Trigger: TGAGGCTAAATACTCTTTTCAGATTGCTTGAGATGT...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR TCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCTGTCACAGGCCTCTTaGACATTCATACAAGAAACG | + |
|
Preference number: 2 (lower is better) Translates to: WYNAQHRKPHFTILLATSLSQAS*TFIQET Trigger: CGTTTCTTGTATGAATGTTCAAGAGGCCTGTGACAG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGGAATGTCACATGAGCTaGCAAATTCCTACAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RPEILFILVCLENPEEPWECHMS*QIPTEL Trigger: AAGCTCTGTAGGAATTTGTCAGCTCATGTGACATTC...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTATGGTCCAAAGACATaGCTTTATAAACAACTCATC | + |
|
Preference number: 2 (lower is better) Translates to: PRFASFAFRWREDVAAGNYGPKT*LYKQLI Trigger: GATGAGTTGTTTATAAAGGCATGTCTTTGGACCATA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATAAGACATTAGATAGCTaGAGTGATATGCAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PRFASFAFRWREDVAAGNKTLDS*SDMQRK Trigger: CTTTCTTTGCATATCACTGCAGCTATCTAATGTCTT...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR TCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTTTAGAAGGGAGATATaGGCAATGTACAATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: VICKESFCFLGQCKTLKFFRREI*AMYNHS Trigger: GGAGTGATTGTACATTGCTCATATCTCCCTTCTAAA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCACATCTCAAGCAATCTaGAAAGAGTATTTAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GSFCQDLRYYSSLYVLRITSQAI*KEYLAS Trigger: TGAGGCTAAATACTCTTTTCAGATTGCTTGAGATGT...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCCAACCCAGGTTGTATaGTCAAAAATACTTTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSPTQVV*SKILFH Trigger: ATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGCAATCTTTCCTCAACTaGTATATATATGAGGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPEILFILVCLENPEEPWQSFLN*YIYEGA Trigger: AGCTCCCTCATATATATAGCAGTTGAGGAAAGATTG...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCATAGCTGCAGTGATATaGAAAGAAAGCTTCTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIIAAVI*KESFCF Trigger: GAAACAGAAGCTTTCTTTGCATATCACTGCAGCTAT...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTAAGACATTAGATAGCTaGAGTGATATGCAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSKTLDS*SDMQRK Trigger: CTTTCTTTGCATATCACTGCAGCTATCTAATGTCTT...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR TCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTTTAGAAGGGAGATATaGGCAATGTACAATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: HILILYIYTTRQKTSKAGFRREI*AMYNHS Trigger: GGAGTGATTGTACATTGCTCATATCTCCCTTCTAAA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR TCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAGCATCATATAGAGTCTaGGAATTAATGGAAGGATTG | + |
|
Preference number: 2 (lower is better) Translates to: LIETIFVNPPNHAKISPSASYRV*ELMEGL Trigger: CAATCCTTCCATTAATTCTCAGACTCTATATGATGC...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCCAACCCAGGTTGTATaGTCAAAAATACTTTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VICKESFCFLGQCKTLKFPTQVV*SKILFH Trigger: ATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCATAGCTGCAGTGATATaGAAAGAAAGCTTCTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HILILYIYTTRQKTSKAGIAAVI*KESFCF Trigger: GAAACAGAAGCTTTCTTTGCATATCACTGCAGCTAT...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCCAACCCAGGTTGTATaGTCAAAAATACTTTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HILILYIYTTRQKTSKAGPTQVV*SKILFH Trigger: ATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAAAGACATTAGATAGCTaGAGTGATATGCAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LIETIFVNPPNHAKISPSKTLDS*SDMQRK Trigger: CTTTCTTTGCATATCACTGCAGCTATCTAATGTCTT...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCACTAAGAAGCCTTATGTaGTACTATAAAATTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LIETIFVNPPNHAKISPSLRSLM*YYKISH Trigger: GTGGGAAATTTTATAGTAGCACATAAGGCTTCTTAG...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR CCA 72 bp | AATGAACCACCTCTATCAAAGCCACAGGGACTCTACTaGACTCATCCAACCATGCAGACTACCCAATATGTC | + |
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Preference number: 3 (lower is better) Translates to: NEPPLSKPQGLY*THPTMQTTQYV Trigger: GACATATTGGGTAGTCTGCATGGTTGGATGAGTCCAGTAGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR CCA 72 bp | TTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATaGTTGGCTAGCCCAAAATTGTATGGCAGTGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: FILVCLENPEEP*LASPKLYGSGR Trigger: CCTACCACTGCCATACAATTTTGGGCTAGCCAACCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR TCA 72 bp | CATCAGGAAGCAATCTTTCCTCAACTGCTATATATATaGGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: HQEAIFPQLLYI*GSFPTQVVCSK Trigger: TTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTCATATATATAGCAGTTGAGGAAAGATTGCTTCCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTGCATCCAACTAAATTaGCATCAGGAAGCAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: PRFASFAFRWREDVAAGNCIQLN*HQEAIF Trigger: AAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTCTGTCACAGGCCTCTaGAACATTCATACAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: GSFCQDLRYYSSLYVLRISVTGL*NIHTRN Trigger: GTTTCTTGTATGAATGTTCAAGAGGCCTGTGACAGA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR TCA 72 bp | AATGGAAGGATTGGGGGTAGTTTGTTTCAGATCAAGTaGAACAGATGTCTGAGACAATCTTATCTTAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: NGRIGGSLFQIK*NRCLRQSYLRC Trigger: ACACCTAAGATAAGATTGTCTCAGACATCTGTTTCACTTGATCTGAAACAAACTACCCCCAATCCTTCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTGCATCCAACTAAATTaGCATCAGGAAGCAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: VICKESFCFLGQCKTLKFCIQLN*HQEAIF Trigger: AAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| 3UTR-3UTR CAA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAGAATTAATGGAAGGATaGGGGGTAGTTTGTTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LIETIFVNPPNHAKISPSELMEG*GVVCFR Trigger: TCTGAAACAAACTACCCCCAATCCTTCCATTAATTC...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR CAA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCATGCATCCAACTAAATTaGCATCAGGAAGCAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LIETIFVNPPNHAKISPSCIQLN*HQEAIF Trigger: AAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCA...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR CAA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAAGATATTATTCATCCTaGTATGTCTTGAGAATCCCG | + |
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Preference number: 3 (lower is better) Translates to: LIETIFVNPPNHAKISPSRYYSS*YVLRIP Trigger: CGGGATTCTCAAGACATACAAGGATGAATAATATCT...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR-3UTR CAA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAATGAGCCATAAGAAATaGCTGTTTTGTAGACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: LIETIFVNPPNHAKISPSMSHKK*LFCRQR Trigger: CCTTTGTCTACAAAACAGCAATTTCTTATGGCTCAT...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| 3UTR TCA 72 bp | AACCATGCAGACTACCCAATATGTCAATCATGGTTGTaGAGAGTCAAAAACATTTCAGCTTTCATGAAATTA | + |
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Preference number: 3 (lower is better) Translates to: NHADYPICQSWL*RVKNISAFMKL Trigger: TAATTTCATGAAAGCTGAAATGTTTTTGACTCTTCACAACCATGATTGACATATTGGGTAGTCTGCATGGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCCGGCTCGCCGCAGGCTaGGGATCAGCTCCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSRLAAG*GSAPPC Trigger: GCAAGGAGGAGCTGATCCGCAGCCTGCGGCGAGCCG...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCGGCTCGCCGCAGGCTaGGGATCAGCTCCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSRLAAG*GSAPPC Trigger: GCAAGGAGGAGCTGATCCGCAGCCTGCGGCGAGCCG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTGGTGTGCTCTGGGCTaGCCTCGCTCCGGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNWCALG*PRSGAS Trigger: AGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATGGATGTGGGTGCCTCTaGTGCTCGGGGCTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNGCGCL*CSGLPL Trigger: CAAGGGCAGCCCCGAGCAGCAGAGGCACCCACATCC...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGCGGCTCGCCGCAGGCTaGGGATCAGCTCCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRRLAAG*GSAPPC Trigger: GCAAGGAGGAGCTGATCCGCAGCCTGCGGCGAGCCG...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATGCTCGGGGCTGCCCTTaGACAAGGGCTTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNARGCP*TRACGA Trigger: AGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGC...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTGGATGTGGGTGCCTCTaGTGCTCGGGGCTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSGCGCL*CSGLPL Trigger: CAAGGGCAGCCCCGAGCAGCAGAGGCACCCACATCC...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTGGGCTCCCTCCACTGTaGCTGGTGTGTTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSGLPPL*LVCSGL Trigger: CAGCCCGGAACACACCAGGCACAGTGGAGGGAGCCC...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCACCCTTGCCACCACTaGAAGACCCGCCGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSHPCHH*KTRRAL Trigger: CAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTGGCCTGGCTATCGATaGAGCAGCGGCTGCCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSWPGYR*SSGCRH Trigger: GTGCCGGCAGCCGCTGCTCCATCGATAGCCAGGCCA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTGGCCTGGCTATCGATaGAGCAGCGGCTGCCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSWPGYR*SSGCRH Trigger: GTGCCGGCAGCCGCTGCTCCATCGATAGCCAGGCCA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTGTGTTTGGTGTGCTCTaGGCTGCCCTCGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSVFGVL*AALAPG Trigger: CCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACAC...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTGCTGCTCCCTGGATGTaGGTGCCTCTGCTGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSAAPWM*VPLLLG Trigger: CCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGC...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTGCTGCTCCCTGGATGTaGGTGCCTCTGCTGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSAAPWM*VPLLLG Trigger: CCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGC...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATCTGGGCTTGTTCCCCTaGCTCTGGGGAGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNLGLFP*LWGGAP Trigger: TGGAGCACCTCCCCAGAGCCAGGGGAACAAGCCCAG...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCGGCTCGCCGCAGGCTaGGGATCAGCTCCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSRLAAG*GSAPPC Trigger: GCAAGGAGGAGCTGATCCGCAGCCTGCGGCGAGCCG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTGGTGTGCTCTGGGCTaGCCTCGCTCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIWCALG*PRSGAS Trigger: AGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGTGGTGTGCTCTGGGCTaGCCTCGCTCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRWCALG*PRSGAS Trigger: AGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCA...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTGCTCGGGGCTGCCCTTaGACAAGGGCTTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSARGCP*TRACGA Trigger: AGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGC...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGCTCCCTGGATGTGGGTaGCTCTGCTGCTCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRLPGCG*LCCSGL Trigger: CAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAG...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTGCAGCACTTCTGGGCTaGTCCCTGGATGTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSAALLG*SLDVGA Trigger: GGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGC...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGGGCTCCCTCCACTGTaGCTGGTGTGTTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRGLPPL*LVCSGL Trigger: CAGCCCGGAACACACCAGGCACAGTGGAGGGAGCCC...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGTGCTGCCCCCGCCGCTaGCTCCACTGCCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWCCPRR*LHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCA...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCCAGCTGGCACAGGCTaGCCTGGCTATCGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSPAGTG*PGYRWS Trigger: GCTCCATCGATAGCCAGGCCAGCCTGTGCCAGCTGG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCGCGGAGGCAACCAGCTaGCACAGGCTGGCCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIAEATS*HRLAWL Trigger: TAGCCAGGCCAGCCTGTGCCAGCTGGTTGCCTCCGC...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGCGGAGGCAACCAGCTaGCACAGGCTGGCCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRAEATS*HRLAWL Trigger: TAGCCAGGCCAGCCTGTGCCAGCTGGTTGCCTCCGC...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGGTGTTTGGTGTGCTCTaGGCTGCCCTCGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWVFGVL*AALAPG Trigger: CCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACAC...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTCCCTCCACTGTGCCTaGTGTGTTCCGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSSLHCA*CVPGCL Trigger: GAGGCAGCCCGGAACACACCAGGCACAGTGGAGGGA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTCCCTCCACTGTGCCTaGTGTGTTCCGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSSLHCA*CVPGCL Trigger: GAGGCAGCCCGGAACACACCAGGCACAGTGGAGGGA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCTGGGCTTGTTCCCCTaGCTCTGGGGAGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLGLFP*LWGGAP Trigger: TGGAGCACCTCCCCAGAGCCAGGGGAACAAGCCCAG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTGGTGTGCTCTGGGCTaGCCTCGCTCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSWCALG*PRSGAS Trigger: AGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR GCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSLLCLV*SGLPSL Trigger: GAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAG...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLLCLV*SGLPSL Trigger: GAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCGCTCGGGGCTGCCCTTaGACAAGGGCTTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIARGCP*TRACGA Trigger: AGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGC...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTCTGCTGCTCGGGGCTaGCCTTGCACAAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSSAARG*PCTRAC Trigger: ACAAGCCCTTGTGCAAGGGCAGCCCCGAGCAGCAGA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTGTGGGTGCCTCTGCTaGTCGGGGCTGCCCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFCGCLC*SGLPLH Trigger: GTGCAAGGGCAGCCCCGAGCAGCAGAGGCACCCACA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTGGATGTGGGTGCCTCTaGTGCTCGGGGCTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFGCGCL*CSGLPL Trigger: CAAGGGCAGCCCCGAGCAGCAGAGGCACCCACATCC...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTCTCCCTGGATGTGGGTaGCTCTGCTGCTCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSLPGCG*LCCSGL Trigger: CAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAG...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCTCCCTGGATGTGGGTaGCTCTGCTGCTCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFLPGCG*LCCSGL Trigger: CAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCTGGCTCTGGGGAGGTaGTCCAGGCTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFLALGR*SRLPPR Trigger: CCTTGGTGGGAGCCTGGAGCACCTCCCCAGAGCCAG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCTGGCTCTGGGGAGGTaGTCCAGGCTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSLALGR*SRLPPR Trigger: CCTTGGTGGGAGCCTGGAGCACCTCCCCAGAGCCAG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTGCTGCCCCCGCCGCTaGCTCCACTGCCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFCCPRR*LHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTGCGGAGGCAACCAGCTaGCACAGGCTGGCCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSAEATS*HRLAWL Trigger: TAGCCAGGCCAGCCTGTGCCAGCTGGTTGCCTCCGC...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTGTGTTTGGTGTGCTCTaGGCTGCCCTCGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFVFGVL*AALAPG Trigger: CCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACAC...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSLGQHF*AAPWMW Trigger: CCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLGQHF*AAPWMW Trigger: CCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGTTGTTCCCCTGGCTCTaGGGAGGTGCTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWLFPWL*GGAPGS Trigger: GGAGCCTGGAGCACCTCCCCAGAGCCAGGGGAACAA...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGTTGTTCCCCTGGCTCTaGGGAGGTGCTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRLFPWL*GGAPGS Trigger: GGAGCCTGGAGCACCTCCCCAGAGCCAGGGGAACAA...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCACGGATCTCGCCGAGATaGAGCTGCAGGCGGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSRISPR*SCRRRL Trigger: CAACCGCCGCCTGCAGCTGCATCTCGGCGAGATCCG...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRILLCLV*SGLPSL Trigger: GAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAG...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCACAAGGGCTTGTGGTaGTCAGGGCTGGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSHKGLW*SGLGPF Trigger: GAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTGCTCGGGGCTGCCCTTaGACAAGGGCTTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSARGCP*TRACGA Trigger: AGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGC...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTCTGCTGCTCGGGGCTaGCCTTGCACAAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRISAARG*PCTRAC Trigger: ACAAGCCCTTGTGCAAGGGCAGCCCCGAGCAGCAGA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTGTGGGTGCCTCTGCTaGTCGGGGCTGCCCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGCGCLC*SGLPLH Trigger: GTGCAAGGGCAGCCCCGAGCAGCAGAGGCACCCACA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTGCAGCACTTCTGGGCTaGTCCCTGGATGTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFAALLG*SLDVGA Trigger: GGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGC...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTGCAGCACTTCTGGGCTaGTCCCTGGATGTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSAALLG*SLDVGA Trigger: GGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGC...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCGGGCTCCCTCCACTGTaGCTGGTGTGTTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGGLPPL*LVCSGL Trigger: CAGCCCGGAACACACCAGGCACAGTGGAGGGAGCCC...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCTGGCTCTGGGGAGGTaGTCCAGGCTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGLALGR*SRLPPR Trigger: CCTTGGTGGGAGCCTGGAGCACCTCCCCAGAGCCAG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTGCTGCCCCCGCCGCTaGCTCCACTGCCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGCCPRR*LHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNLPPLA*CLWWSG Trigger: TCCTGACCACCACAAACACCATGCCAGTGGGGGAAG...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTTGCACAAGGGCTTGTaGTGCTCAGGGCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSLHKGL*CSGLGP Trigger: AGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTTGCACAAGGGCTTGTaGTGCTCAGGGCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSLHKGL*CSGLGP Trigger: AGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTTTGCACAAGGGCTTGTaGTGCTCAGGGCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLHKGL*CSGLGP Trigger: AGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAA...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCGCTGCTCCCTGGATGTaGGTGCCTCTGCTGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGAAPWM*VPLLLG Trigger: CCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGC...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRILGQHF*AAPWMW Trigger: CCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAG...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRLGQHF*AAPWMW Trigger: CCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAG...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTTCCGGGCTGCCTCCTaGCCTATGCTTCTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNFRAAS*PMLLEM Trigger: CATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTTCCCTCCACTGTGCCTaGTGTGTTCCGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSSLHCA*CVPGCL Trigger: GAGGCAGCCCGGAACACACCAGGCACAGTGGAGGGA...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTTGTTCCCCTGGCTCTaGGGAGGTGCTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFLFPWL*GGAPGS Trigger: GGAGCCTGGAGCACCTCCCCAGAGCCAGGGGAACAA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTTGTTCCCCTGGCTCTaGGGAGGTGCTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSLFPWL*GGAPGS Trigger: GGAGCCTGGAGCACCTCCCCAGAGCCAGGGGAACAA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCTGGGCTTGTTCCCCTaGCTCTGGGGAGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSLGLFP*LWGGAP Trigger: TGGAGCACCTCCCCAGAGCCAGGGGAACAAGCCCAG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTAGACCCGCCGGGCTCTaGGCCCCCAGCCTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTRPAGL*APSLSP Trigger: TGGAGAAAGGCTGGGGGCCCAGAGCCCGGCGGGTCT...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSPGTPF*LSAGHH Trigger: ATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSLLCLV*SGLPSL Trigger: GAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTGTGGGTGCCTCTGCTaGTCGGGGCTGCCCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTCGCLC*SGLPLH Trigger: GTGCAAGGGCAGCCCCGAGCAGCAGAGGCACCCACA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTGGATGTGGGTGCCTCTaGTGCTCGGGGCTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTGCGCL*CSGLPL Trigger: CAAGGGCAGCCCCGAGCAGCAGAGGCACCCACATCC...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTCTCCCTGGATGTGGGTaGCTCTGCTGCTCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTLPGCG*LCCSGL Trigger: CAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAG...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTCTGGCTCTGGGGAGGTaGTCCAGGCTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTLALGR*SRLPPR Trigger: CCTTGGTGGGAGCCTGGAGCACCTCCCCAGAGCCAG...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATGCCTCCACTGCCACTTaGATGTTTGTGATCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNASTAT*MFVIRA Trigger: AGCCCTGATCACAAACATGCAAGTGGCAGTGGAGGC...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTGCTGCCCCCGCCGCTaGCTCCACTGCCACTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTCCPRR*LHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGCGAATGAGGTTGCTGTaGTCCAGCATCGCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRRMRLL*SSIALT Trigger: GGTGAGCGCGATGCTGGACCACAGCAACCTCATTCG...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTGGCCTGGCTATCGATaGAGCAGCGGCTGCCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTWPGYR*SSGCRH Trigger: GTGCCGGCAGCCGCTGCTCCATCGATAGCCAGGCCA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCCAGCTGGCACAGGCTaGCCTGGCTATCGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGPAGTG*PGYRWS Trigger: GCTCCATCGATAGCCAGGCCAGCCTGTGCCAGCTGG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLPPLA*CLWWSG Trigger: TCCTGACCACCACAAACACCATGCCAGTGGGGGAAG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTGTGGTGCTCAGGGCTaGGTCCTTTCAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSCGAQG*VLSVLW Trigger: CCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTTGCACAAGGGCTTGTaGTGCTCAGGGCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRILHKGL*CSGLGP Trigger: AGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTGCTGCTCCCTGGATGTaGGTGCCTCTGCTGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTAAPWM*VPLLLG Trigger: CCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGC...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTTCCGGGCTGCCTCCTaGCCTATGCTTCTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSFRAAS*PMLLEM Trigger: CATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCTGGGCTTGTTCCCCTaGCTCTGGGGAGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGLGLFP*LWGGAP Trigger: TGGAGCACCTCCCCAGAGCCAGGGGAACAAGCCCAG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCAGAACCCGGGAGAGATaGCAGGCATCGTCCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSRTRER*QASSYS Trigger: GGAATAGGACGATGCCTGCCATCTCTCCCGGGTTCT...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWPGTPF*LSAGHH Trigger: ATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGG...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRPGTPF*LSAGHH Trigger: ATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGG...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCACAAGGGCTTGTGGTaGTCAGGGCTGGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSHKGLW*SGLGPF Trigger: GAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTCACAAGGGCTTGTGGTaGTCAGGGCTGGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSHKGLW*SGLGPF Trigger: GAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTG...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTCTGCTGCTCGGGGCTaGCCTTGCACAAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGSAARG*PCTRAC Trigger: ACAAGCCCTTGTGCAAGGGCAGCCCCGAGCAGCAGA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTGCAGCACTTCTGGGCTaGTCCCTGGATGTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTAALLG*SLDVGA Trigger: GGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGC...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTTCCAGGACAGGAGCCTaGAGCATCTCCAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSSRTGA*SISKFP Trigger: AGGAAACTTGGAGATGCTGCAGGCTCCTGTCCTGGA...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATAACCCTGGGGCAGCATaGGATTTTCTTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNNPGAA*DFLLPA Trigger: AGCTGGAAGAAGAAAATCGCATGCTGCCCCAGGGTT...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093253.10 |
||
| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCGAATGAGGTTGCTGTaGTCCAGCATCGCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFRMRLL*SSIALT Trigger: GGTGAGCGCGATGCTGGACCACAGCAACCTCATTCG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTCCAGCTGGCACAGGCTaGCCTGGCTATCGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTPAGTG*PGYRWS Trigger: GCTCCATCGATAGCCAGGCCAGCCTGTGCCAGCTGG...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCCTGGCCTATGCTTCTaGAAATGTTCAGGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSPGLCF*KCSGLP Trigger: TGGGAGCCCTGAACATTTCCAGAAGCATAGGCCAGG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTTCCTCCACACAACCTaGGGCAGCATGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNFLHTT*GSMRFS Trigger: AGAAAATCGCATGCTGCCCCAGGTTGTGTGGAGGAA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042534.15 ENSMUST00000109502.9 |
||
| CDS-3UTR TCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCCCCGTAATGTTGTTTaGGATGCTCTGGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSPRNVV*DALGLF Trigger: GAACAAGCCCAGAGCATCTCAAACAACATTACGGGG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCCCCCGTAATGTTGTTTaGGATGCTCTGGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSPRNVV*DALGLF Trigger: GAACAAGCCCAGAGCATCTCAAACAACATTACGGGG...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRITGSGC*EGVVCP Trigger: TGGACATACCACACCTTCTCAGCAGCCTGAACCTGT...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093253.10 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSPGTPF*LSAGHH Trigger: ATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGG...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGTCCAGGACAGGAGCCTaGAGCATCTCCAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWSRTGA*SISKFP Trigger: AGGAAACTTGGAGATGCTGCAGGCTCCTGTCCTGGA...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCGAATGAGGTTGCTGTaGTCCAGCATCGCGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGRMRLL*SSIALT Trigger: GGTGAGCGCGATGCTGGACCACAGCAACCTCATTCG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTAGGTCCCTCAGTTCCTaGTTGTCTTCCTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSRSLSS*LSSWSF Trigger: GAAACTCCAGGAAGACAACCAGGAACTGAGGGACCT...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSLPPLA*CLWWSG Trigger: TCCTGACCACCACAAACACCATGCCAGTGGGGGAAG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFLPPLA*CLWWSG Trigger: TCCTGACCACCACAAACACCATGCCAGTGGGGGAAG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTGTGGTGCTCAGGGCTaGGTCCTTTCAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSCGAQG*VLSVLW Trigger: CCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTGTGGTGCTCAGGGCTaGGTCCTTTCAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFCGAQG*VLSVLW Trigger: CCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGCCTGGCCTATGCTTCTaGAAATGTTCAGGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWPGLCF*KCSGLP Trigger: TGGGAGCCCTGAACATTTCCAGAAGCATAGGCCAGG...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTTTCCGGGCTGCCTCCTaGCCTATGCTTCTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSFRAAS*PMLLEM Trigger: CATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAA...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTTTGTTTGAGATGCTCTaGGCTTGTTCCCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLFEML*ACSPGS Trigger: AGAGCCAGGGGAACAAGCCCAGAGCATCTCAAACAA...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTTGTTTGAGATGCTCTaGGCTTGTTCCCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSLFEML*ACSPGS Trigger: AGAGCCAGGGGAACAAGCCCAGAGCATCTCAAACAA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTCTATTCTGGGTAGCCTaGGGCAGCATGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSLFWVA*GSMRFS Trigger: AGAAAATCGCATGCTGCCCCAGGCTACCCAGAATAG...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCAGCTGGAGAGTTGAGTaGACTGTTATTCCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSSWRVE*TVIPIS Trigger: GCTGATGGGAATAACAGTTCACTCAACTCTCCAGCT...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTACCCTTTTGCCTTTCTaGCGGTCATCATCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSTLLPF*RSSSRK Trigger: TTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGT...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCAGCTCCTTCAGCTTCTaGAAGTATAAGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSSSFSF*KYKATS Trigger: GGAAGTGGCCTTATACTTGCAGAAGCTGAAGGAGCT...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGCAACCTGGGGCAGCATaGGATTTTCTTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWQPGAA*DFLLPA Trigger: AGCTGGAAGAAGAAAATCGCATGCTGCCCCAGGTTG...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042534.15 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTCCAGGACAGGAGCCTaGAGCATCTCCAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSSRTGA*SISKFP Trigger: AGGAAACTTGGAGATGCTGCAGGCTCCTGTCCTGGA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCATGTGGTGCTCAGGGCTaGGTCCTTTCAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSCGAQG*VLSVLW Trigger: CCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACA...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCCTGGCCTATGCTTCTaGAAATGTTCAGGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSPGLCF*KCSGLP Trigger: TGGGAGCCCTGAACATTTCCAGAAGCATAGGCCAGG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCATTCCGGGCTGCCTCCTaGCCTATGCTTCTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSFRAAS*PMLLEM Trigger: CATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAA...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGTTGTTTGAGATGCTCTaGGCTTGTTCCCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWLFEML*ACSPGS Trigger: AGAGCCAGGGGAACAAGCCCAGAGCATCTCAAACAA...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTTCCTCCACACAACCTaGGGCAGCATGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIFLHTT*GSMRFS Trigger: AGAAAATCGCATGCTGCCCCAGGTTGTGTGGAGGAA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042534.15 ENSMUST00000109502.9 |
||
| 3UTR CAA 72 bp | TGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTaGAGAATCCCGAAGAACCATGGTTGGCTAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQDLRYYSSLYV*RIPKNHGWLAQ Trigger: TTGGGCTAGCCAACCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| 3UTR CAA 72 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTaGTATGTCTTGAGAATCCCGAAGAACCATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSS*YVLRIPKNHGW Trigger: CCAACCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR TCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTCCCCGTAATGTTGTTTaGGATGCTCTGGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSPRNVV*DALGLF Trigger: GAACAAGCCCAGAGCATCTCAAACAACATTACGGGG...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCCCCGTAATGTTGTTTaGGATGCTCTGGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFPRNVV*DALGLF Trigger: GAACAAGCCCAGAGCATCTCAAACAACATTACGGGG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGTGSGC*EGVVCP Trigger: TGGACATACCACACCTTCTCAGCAGCCTGAACCTGT...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGACCCTTTTGCCTTTCTaGCGGTCATCATCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRTLLPF*RSSSRK Trigger: TTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGT...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGAGCTCCTTCAGCTTCTaGAAGTATAAGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRSSFSF*KYKATS Trigger: GGAAGTGGCCTTATACTTGCAGAAGCTGAAGGAGCT...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAGCCTCCACTGCCACTTaGATGTTTGTGATCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSASTAT*MFVIRA Trigger: AGCCCTGATCACAAACATGCAAGTGGCAGTGGAGGC...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTAGGTTGATTCATTCATaGCGCTGTAGACATTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSRLIHS*RCRHSG Trigger: ACCGGAATGTCTACAGCGGCATGAATGAATCAACCT...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCAACCTGGGGCAGCATaGGATTTTCTTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSQPGAA*DFLLPA Trigger: AGCTGGAAGAAGAAAATCGCATGCTGCCCCAGGTTG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042534.15 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCATCCAGGACAGGAGCCTaGAGCATCTCCAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSSRTGA*SISKFP Trigger: AGGAAACTTGGAGATGCTGCAGGCTCCTGTCCTGGA...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATTCTTCCTGGAGTTTCTaGTTAATATCCTTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFASFAFRWREDVAAGNSSWSF*LISLSP Trigger: AGGGCTCAAGGATATTAACCAGAAACTCCAGGAAGA...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTAGGTCCCTCAGTTCCTaGTTGTCTTCCTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSRSLSS*LSSWSF Trigger: GAAACTCCAGGAAGACAACCAGGAACTGAGGGACCT...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTAGGTCCCTCAGTTCCTaGTTGTCTTCCTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFRSLSS*LSSWSF Trigger: GAAACTCCAGGAAGACAACCAGGAACTGAGGGACCT...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCCTGGCCTATGCTTCTaGAAATGTTCAGGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGPGLCF*KCSGLP Trigger: TGGGAGCCCTGAACATTTCCAGAAGCATAGGCCAGG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTAACATAGGACAAGGTTaGTTCATTCATGCCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSNIGQG*FIHAAV Trigger: TACAGCGGCATGAATGAATCAACCTTGTCCTATGTT...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTAGCTGGAGAGTTGAGTaGACTGTTATTCCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VICKESFCFLGQCKTLKFSWRVE*TVIPIS Trigger: GCTGATGGGAATAACAGTTCACTCAACTCTCCAGCT...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTACCCTTTTGCCTTTCTaGCGGTCATCATCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSTLLPF*RSSSRK Trigger: TTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGT...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTAGCTCCTTCAGCTTCTaGAAGTATAAGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSSSFSF*KYKATS Trigger: GGAAGTGGCCTTATACTTGCAGAAGCTGAAGGAGCT...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTGCCTCCACTGCCACTTaGATGTTTGTGATCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTASTAT*MFVIRA Trigger: AGCCCTGATCACAAACATGCAAGTGGCAGTGGAGGC...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGAGGTTGATTCATTCATaGCGCTGTAGACATTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRRLIHS*RCRHSG Trigger: ACCGGAATGTCTACAGCGGCATGAATGAATCAACCT...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAAGGTCCCTCAGTTCCTaGTTGTCTTCCTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSRSLSS*LSSWSF Trigger: GAAACTCCAGGAAGACAACCAGGAACTGAGGGACCT...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTTGTTTGAGATGCTCTaGGCTTGTTCCCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGLFEML*ACSPGS Trigger: AGAGCCAGGGGAACAAGCCCAGAGCATCTCAAACAA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCATAGGCCCTTTGTACTaGTTTCCTGACAAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGASQPRLYAQKYFFISSIGPLY*FPDKCC Trigger: GCAACATTTGTCAGGAAACCAGTACAAAGGGCCTAT...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGAACCTAAAAGAACCCTaGGGCAGCATGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWNLKEP*GSMRFS Trigger: AGAAAATCGCATGCTGCCCCAGGGTTCTTTTAGGTT...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093253.10 |
||
| CDS-3UTR TCA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTTTGTACTGGTTTCCTaGCAAATGTTGCCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSFVLVS*QMLPNS Trigger: GGAATTAGGCAACATTTGTCAGGAAACCAGTACAAA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | AGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCCCGAAGAACCATGGTTTCCTGACAAATGTTaGCTAATTCCAGGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEILFILVCLENPEEPWFPDKC*LIPGQE Trigger: CTCCTGTCCTGGAATTAGGCAACATTTGTCAGGAAA...CCATGGTTCTTCGGGATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTTTGTACTGGTTTCCTaGCAAATGTTGCCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIFVLVS*QMLPNS Trigger: GGAATTAGGCAACATTTGTCAGGAAACCAGTACAAA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR TCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTTTCTAGTTGGAGGTTaGCTTCTATTCTGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGFLVGG*LLFWVA Trigger: GGCTACCCAGAATAGAAGTCAACCTCCAACTAGAAA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCAAGGTTGATTCATTCATaGCGCTGTAGACATTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSRLIHS*RCRHSG Trigger: ACCGGAATGTCTACAGCGGCATGAATGAATCAACCT...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTTTTCCTGACAAATGTTaGCTAATTCCAGGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLEGRYEQCTITPCDVMSFPDKC*LIPGQE Trigger: CTCCTGTCCTGGAATTAGGCAACATTTGTCAGGAAA...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTCTTCCTGGAGTTTCTaGTTAATATCCTTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSSSWSF*LISLSP Trigger: AGGGCTCAAGGATATTAACCAGAAACTCCAGGAAGA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CCA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTATAGGCCCTTTGTACTaGTTTCCTGACAAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WYNAQHRKPHFTILLATSIGPLY*FPDKCC Trigger: GCAACATTTGTCAGGAAACCAGTACAAAGGGCCTAT...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTTTCCTGACAAATGTTaGCTAATTCCAGGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGFPDKC*LIPGQE Trigger: CTCCTGTCCTGGAATTAGGCAACATTTGTCAGGAAA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CCA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCATAGGCCCTTTGTACTaGTTTCCTGACAAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HILILYIYTTRQKTSKAGIGPLY*FPDKCC Trigger: GCAACATTTGTCAGGAAACCAGTACAAAGGGCCTAT...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| 3UTR CAA 72 bp | ATTTGCACAAGTATTTTGTCAAAAGACCAATGTCCTTaGTATCGCTACTGCAGGATCTACTGCAAGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ICTSILSKDQCP*YRYCRIYCKHK Trigger: TTTGTGCTTGCAGTAGATCCTGCAGTAGCGATACAAAGGACATTGGTCTTTTGACAAAATACTTGTGCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCATTTGTACTGGTTTCCTaGCAAATGTTGCCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIETIFVNPPNHAKISPSFVLVS*QMLPNS Trigger: GGAATTAGGCAACATTTGTCAGGAAACCAGTACAAA...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTTTCCTGACAAATGTTaGCTAATTCCAGGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTFPDKC*LIPGQE Trigger: CTCCTGTCCTGGAATTAGGCAACATTTGTCAGGAAA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR TCA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTTTGTACTGGTTTCCTaGCAAATGTTGCCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVILHPTKFASGSNLSSTFVLVS*QMLPNS Trigger: GGAATTAGGCAACATTTGTCAGGAAACCAGTACAAA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| 3UTR CAA 72 bp | CACCTCAGAATTCAAATGAGAAAACCAAATGTTATCTaGCATCCAACTAAATTTGCATCAGGAAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLRIQMRKPNVI*HPTKFASGSNL Trigger: AAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATTTGGTTTTCTCATTTGAATTCTGAGGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS GCA 90 bp | GAACCCGGGAGAGATGGCAGGCATCGTCCTATTCCTCGGCACCCTTaGCACCACTGCAAGACCCGCCGGGCTCTGGGCCCCCAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPGRDGRHRPIPRHP*HHCKTRRALGPQPF Trigger: GAAAGGCTGGGGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCTGCCATCTCTCCCGGGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS GCA 90 bp | TCCGGTGATGGGATGATGAATCCTCTTGAGCAGGCCGCCGGAGGGTaGCTTCCCTGCTGCCCCCGCCGCTGCCTCCACTGCCACTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGDGMMNPLEQAAGG*LPCCPRRCLHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCAGGGAAGGCACCCTCCGGCGGCCTGCTCAAGAGGATTCATCATCCCATCACCGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 90 bp | AGATGCAGCTGCAGGCGGCGGTTGACCTCGCGAATGAGGTTGCTGTaGTCCAGCATCGCGCTCACCTTCTCGGCTTCGGCTCGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSCRRRLTSRMRLL*SSIALTFSASARRR Trigger: CCTGCGGCGAGCCGAAGCCGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCATCT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 90 bp | GCTCCCACTCAACACGTGCTTGGGCAGCACTTCTGGGCTGCTCCCTaGATGTGGGTGCCTCTGCTGCTCGGGGCTGCCCTTGCACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: APTQHVLGQHFWAAP*MWVPLLLGAALAQG Trigger: CCCTTGTGCAAGGGCAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAGCACGTGTTGAGTGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS GCA 90 bp | GGGATGATGAATCCTCTTGAGCAGGCCGCCGGAGGGTGCCTTCCCTaGTGCCCCCGCCGCTGCCTCCACTGCCACTTGCATGTTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GMMNPLEQAAGGCLP*CPRRCLHCHLHVCD Trigger: ATCACAAACATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCAGGGAAGGCACCCTCCGGCGGCCTGCTCAAGAGGATTCATCATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 90 bp | GCTGCTCGGGGCTGCCCTTGCACAAGGGCTTGTGGTGCTCAGGGCTaGGTCCTTTCAGTGCTTTGGAGTGATCTGGGGTCCCAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AARGCPCTRACGAQG*VLSVLWSDLGSQKP Trigger: GGGCTTCTGGGACCCCAGATCACTCCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 90 bp | GAAATGTTCAGGGCTCCCACTCAACACGTGCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGGGTGCCTCTGCTGCTCGGGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EMFRAPTQHVLGQHF*AAPWMWVPLLLGAA Trigger: GGCAGCCCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAGCACGTGTTGAGTGGGAGCCCTGAACATTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 90 bp | AGAGATGGCAGGCATCGTCCTATTCCTCGGCACCCTTGCCACCACTaGAAGACCCGCCGGGCTCTGGGCCCCCAGCCTTTCTCCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: RDGRHRPIPRHPCHH*KTRRALGPQPFSIF Trigger: AAATATGGAGAAAGGCTGGGGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCTGCCATCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS CCA 90 bp | CCACTGTGCCTGGTGTGTTCCGGGCTGCCTCCTGGCCTATGCTTCTaGAAATGTTCAGGGCTCCCACTCAACACGTGCTTGGGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLCLVCSGLPPGLCF*KCSGLPLNTCLGST Trigger: AGTGCTGCCCAAGCACGTGTTGAGTGGGAGCCCTGAACATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAACACACCAGGCACAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS GCA 90 bp | TTCTGGTTAATATCCTTGAGCCCTCGGATCTCGCCGAGATGCAGCTaGAGGCGGCGGTTGACCTCGCGAATGAGGTTGCTGTGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FWLISLSPRISPRCS*RRRLTSRMRLLWSS Trigger: GCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCATCTCGGCGAGATCCGAGGGCTCAAGGATATTAACCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 90 bp | TGCCCTCGCTCCGGGGCTTCTGTAAATGTTCAGGGCTTCCCCCACTaGCATGGTGTTTGTGGTGGTCAGGACTATCAGTACTGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRSGASVNVQGFPH*HGVCGGQDYQYCQC Trigger: GCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAAGCCCCGGAGCGAGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 90 bp | CTGGGTTTGTGTAGATGTTCAGGGCTAGTGCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTCCGGGGCTTCTGTAAATGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLCRCSGLVLLCLV*SGLPSLRGFCKCSG Trigger: CCCTGAACATTTACAGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAGCACTAGCCCTGAACATCTACACAAACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 90 bp | CTGCAAGACCCGCCGGGCTCTGGGCCCCCAGCCTTTCTCCATATTTaGGCTGTTTCTAGTTGGAGGTTGACTTCTATTCTGGGTAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQDPPGSGPPAFLHI*AVSSWRLTSILGSL Trigger: CAGGCTACCCAGAATAGAAGTCAACCTCCAACTAGAAACAGCTCAAATATGGAGAAAGGCTGGGGGCCCAGAGCCCGGCGGGTCTTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
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| CDS GCA 90 bp | CAGCTGTGTAGCGACCCAATCTTTGCCACTCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCATCCAGGAAACAGCATAGGTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLCSDPIFATPGTPF*LSAGHHPGNSIGPS Trigger: TGAGGGACCTATGCTGTTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTACACAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 90 bp | TCGCTCCGGGGCTTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGACTATCAGTACTGCCAGTGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRGFCKCSGLPPLA*CLWWSGLSVLPVLE Trigger: CTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAAGCCCCGGAGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 90 bp | TGCACAAGGGCTTGTGGTGCTCAGGGCTGGGTCCTTTCAGTGCTTTaGAGTGATCTGGGGTCCCAGAAGCCCTGGGTTTGTGTAGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CTRACGAQGWVLSVL*SDLGSQKPWVCVDV Trigger: AACATCTACACAAACCCAGGGCTTCTGGGACCCCAGATCACTCCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 90 bp | GGCTTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATGGTGTTTGTaGTGGTCAGGACTATCAGTACTGCCAGTGCTAGAGGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFCKCSGLPPLAWCL*WSGLSVLPVLEVLL Trigger: CAGCAGCACCTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 90 bp | TTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATGGTGTTTGTGGTaGTCAGGACTATCAGTACTGCCAGTGCTAGAGGTGCTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FCKCSGLPPLAWCLW*SGLSVLPVLEVLLP Trigger: CGGCAGCAGCACCTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109502.9 |
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| CDS CCA 90 bp | TTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATGGTGTTTGTGGTaGTCAGGACTATCAGTACTGCCAGTGCTAGAGGTGCTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FCKCSGLPPLAWCLW*SGLSVLPVLEVLLP Trigger: TGGCAGCAGCACCTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTGCTCGGGGCTGCCCTaGCACAAGGGCTTGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGASQPRLYAQKYFFISSCSGLP*HKGLWC Trigger: GCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGCA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTGCTCGGGGCTGCCCTaGCACAAGGGCTTGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSCSGLP*HKGLWC Trigger: GCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGCA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRFASFAFRWREDVAAGNTSRMR*LWSSIA Trigger: CGCGATGCTGGACCACAGCAACCTCATTCGCGAGGT...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CAA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCCCTTGCACAAGGGCTaGTGGTGCTCAGGGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSPLHKG*WCSGLG Trigger: ACCCAGCCCTGAGCACCACAAGCCCTTGTGCAAGGG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSTSRMR*LWSSIA Trigger: CGCGATGCTGGACCACAGCAACCTCATTCGCGAGGT...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSVATQS*PLPGHP Trigger: AGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTAC...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGASQPRLYAQKYFFISSVATQS*PLPGHP Trigger: AGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTAC...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCTAGTGCTCCTGTGTTaGGTGTGCTCTGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSLVLLC*VCSGLP Trigger: GGGCAGCCCAGAGCACACCAAACACAGGAGCACTAG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTGCTCGGGGCTGCCCTaGCACAAGGGCTTGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFCSGLP*HKGLWC Trigger: GCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGCA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 90 bp | TTCCTCCACACAACCTTAAGAGAATGTACCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCACTGAAGCTAGCTGGAGAGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLHTTLRECTTGSGC*EGVVCPLKLAGELS Trigger: ACTCAACTCTCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCTGTGGTACATTCTCTTAAGGTTGTGTGGAGGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 ENSMUST00000160016.8 |
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| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTAGCTGCAGGCGGCGGTaGACCTCGCGAATGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFSCRRR*TSRMRL Trigger: CAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCT...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS-3UTR CAA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSFCQDLRYYSSLYVLRIVATQS*PLPGHP Trigger: AGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTAC...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
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| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCCCTTGCACAAGGGCTaGTGGTGCTCAGGGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFPLHKG*WCSGLG Trigger: ACCCAGCCCTGAGCACCACAAGCCCTTGTGCAAGGG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 90 bp | TCAACATCCAAGACCTTAAGAGAATGTACCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCACTGAAGCTAGCTGGAGAGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STSKTLRECTTGSGC*EGVVCPLKLAGELS Trigger: ACTCAACTCTCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCTGTGGTACATTCTCTTAAGGTCTTGGATGTTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140601.3 |
||
| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFTSRMR*LWSSIA Trigger: CGCGATGCTGGACCACAGCAACCTCATTCGCGAGGT...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DLEGRYEQCTITPCDVMSVATQS*PLPGHP Trigger: AGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTAC...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATTTGCTAGTTTCGCCTTTAGATGGAGGGAAGATGTAGCAGCAGGAAATCCAGAAGCCCTGGGTTaGTGTAGATGTTCAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRFASFAFRWREDVAAGNPEALG*CRCSGL Trigger: TAGCCCTGAACATCTACACAAACCCAGGGCTTCTGG...ATTTCCTGCTGCTACATCTTCCCTCCATCTAAAGGCGAAACTAGCAAATCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTGAGACTATATTTGTCAATCCTCCCAACCATGCAAAAATATCTCCCTCACCCTTGCACAAGGGCTaGTGGTGCTCAGGGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIETIFVNPPNHAKISPSPLHKG*WCSGLG Trigger: ACCCAGCCCTGAGCACCACAAGCCCTTGTGCAAGGG...TGAGGGAGATATTTTTGCATGGTTGGGAGGATTGACAAATATAGTCTCAATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTTATTCCTCGGCACCCTaGCCACCACTGCAAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFYSSAP*PPLQDP Trigger: CGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATA...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HILILYIYTTRQKTSKAGTSRMR*LWSSIA Trigger: CGCGATGCTGGACCACAGCAACCTCATTCGCGAGGT...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTTTCTGGTTAATATCCTaGAGCCCTCGGATCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSFWLIS*SPRISP Trigger: CGGCGAGATCCGAGGGCTCAAGGATATTAACCAGAA...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGASQPRLYAQKYFFISSSLSSW*SSWSFW Trigger: CCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGA...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSSLSSW*SSWSFW Trigger: CCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGA...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTCCACTGGCATGGTGTTaGTGGTGGTCAGGACTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSPLAWC*WWSGLS Trigger: TGATAGTCCTGACCACCACAAACACCATGCCAGTGG...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCCCACTGGCATGGTGTTaGTGGTGGTCAGGACTATCA | + |
|
Preference number: 5 (lower is better) Translates to: EGASQPRLYAQKYFFISSPLAWC*WWSGLS Trigger: TGATAGTCCTGACCACCACAAACACCATGCCAGTGG...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCCTAGTGCTCCTGTGTTaGGTGTGCTCTGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HILILYIYTTRQKTSKAGLVLLC*VCSGLP Trigger: GGGCAGCCCAGAGCACACCAAACACAGGAGCACTAG...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGCTTCCCAACCCAGGTTGTATGCTCAAAAATACTTTTTCATATCTTCCCCAGAAGCCCTGGGTTaGTGTAGATGTTCAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EGASQPRLYAQKYFFISSPEALG*CRCSGL Trigger: TAGCCCTGAACATCTACACAAACCCAGGGCTTCTGG...GGAAGATATGAAAAAGTATTTTTGAGCATACAACCTGGGTTGGGAAGCTCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGCTTCTGCCAAGACCTGAGATATTATTCATCCTTGTATGTCTTGAGAATCTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFCQDLRYYSSLYVLRISLSSW*SSWSFW Trigger: CCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGA...GATTCTCAAGACATACAAGGATGAATAATATCTCAGGTCTTGGCAGAAGCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGACTCTTATAAGGCCACTTCCTaGTGCATCACTCCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLPLDIMNHLYQSHRDSYKATS*CITPAV Trigger: CACAGCTGGAGTGATGCACAAGGAAGTGGCCTTATA...AGAGTCCCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTTTCTGGTTAATATCCTaGAGCCCTCGGATCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WYNAQHRKPHFTILLATSFWLIS*SPRISP Trigger: CGGCGAGATCCGAGGGCTCAAGGATATTAACCAGAA...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CAA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGTATAAGGCCACTTCCTaGTGCATCACTCCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRYKATS*CITPAV Trigger: CACAGCTGGAGTGATGCACAAGGAAGTGGCCTTATA...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | TGGTATAATGCTCAGCACAGGAAGCCTCATTTTACCATCTTATTAGCAACTTCTCCACTGGCATGGTGTTaGTGGTGGTCAGGACTATCA | + |
|
Preference number: 5 (lower is better) Translates to: WYNAQHRKPHFTILLATSPLAWC*WWSGLS Trigger: TGATAGTCCTGACCACCACAAACACCATGCCAGTGG...AGAAGTTGCTAATAAGATGGTAAAATGAGGCTTCCTGTGCTGAGCATTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 |
||
| CDS-3UTR CAA 90 bp | GATTTAGAAGGGAGATATGAGCAATGTACAATCACTCCATGTGATGTCATGAGTCCAGAAGCCCTGGGTTaGTGTAGATGTTCAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: DLEGRYEQCTITPCDVMSPEALG*CRCSGL Trigger: TAGCCCTGAACATCTACACAAACCCAGGGCTTCTGG...ACTCATGACATCACATGGAGTGATTGTACATTGCTCATATCTCCCTTCTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | GTGATATGCAAAGAAAGCTTCTGTTTCCTAGGGCAGTGCAAGACTTTAAAGTTTCCAGAAGCCCTGGGTTaGTGTAGATGTTCAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VICKESFCFLGQCKTLKFPEALG*CRCSGL Trigger: TAGCCCTGAACATCTACACAAACCCAGGGCTTCTGG...AAACTTTAAAGTCTTGCACTGCCCTAGGAAACAGAAGCTTTCTTTGCATATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTTCTGGTTAATATCCTaGAGCCCTCGGATCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HILILYIYTTRQKTSKAGFWLIS*SPRISP Trigger: CGGCGAGATCCGAGGGCTCAAGGATATTAACCAGAA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | ATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCACACATCTCAAGCAATCTAAGCTAGCTGGAGAGTaGAGTGAACTGTTATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IYTTRQKTSKAGTHLKQSKLAGE*SELLFP Trigger: TGGGAATAACAGTTCACTCAACTCTCCAGCTAGCTT...AGATTGCTTGAGATGTGTGCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS TCA 90 bp | GCTTTTTCTGTCTCACTAAGGTCATGGCCATACTCTTTACCCTGCTaGCGATCTATAGTTTCCTCAACATCCAAGACCTTAAGAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: AFSVSLRSWPYSLPC*RSIVSSTSKTLREC Trigger: ACATTCTCTTAAGGTCTTGGATGTTGAGGAAACTATAGATCGTCAGCAGGGTAAAGAGTATGGCCATGACCTTAGTGAGACAGAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140601.3 |
||
| CDS GCA 90 bp | GAGAGAGAGAGACCTTGGATTTCTTATTCAATATTATGTCTCCATTaGCTAAACAAGTGTCCTGGGGCAGCATGCGATTTTCTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERERPWISYSILCLH*LNKCPGAACDFLLP Trigger: TGGAAGAAGAAAATCGCATGCTGCCCCAGGACACTTGTTTAGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCTCTCTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
||
| CDS-3UTR CAA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NVILHPTKFASGSNLSSTSLSSW*SSWSFW Trigger: CCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGA...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCTATAAGGCCACTTCCTaGTGCATCACTCCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HILILYIYTTRQKTSKAGYKATS*CITPAV Trigger: CACAGCTGGAGTGATGCACAAGGAAGTGGCCTTATA...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTATCTTGCATCCAACTAAATTTGCATCAGGAAGCAATCTTTCCTCAACTCCACTGGCATGGTGTTaGTGGTGGTCAGGACTATCA | + |
|
Preference number: 5 (lower is better) Translates to: NVILHPTKFASGSNLSSTPLAWC*WWSGLS Trigger: TGATAGTCCTGACCACCACAAACACCATGCCAGTGG...AGTTGAGGAAAGATTGCTTCCTGATGCAAATTTAGTTGGATGCAAGATAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | AGTAGAAAGCTCCTACCATTAGATATAATGAACCACCTCTATCAAAGCCACAGGGTTTCTAGTTGGAGGTaGACTTCTATTCTGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKLLPLDIMNHLYQSHRVSSWR*TSILGS Trigger: GCTACCCAGAATAGAAGTCAACCTCCAACTAGAAAC...CCTGTGGCTTTGATAGAGGTGGTTCATTATATCTAATGGTAGGAGCTTTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146385.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCTAATATTATACATCTATACCACTAGGCAGAAAACTAGCAAAGCTGGCAAGCTAGCTGGAGAGTaGAGTGAACTGTTATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HILILYIYTTRQKTSKAGKLAGE*SELLFP Trigger: TGGGAATAACAGTTCACTCAACTCTCCAGCTAGCTT...GCCAGCTTTGCTAGTTTTCTGCCTAGTGGTATAGATGTATAATATTAGAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 |
||
| CDS GCA 72 bp | AATCCTCTTGAGCAGGCCGCCGGAGGGTGCCTTCCCTaGTGCCCCCGCCGCTGCCTCCACTGCCACTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NPLEQAAGGCLP*CPRRCLHCHLH Trigger: ATGCAAGTGGCAGTGGAGGCAGCGGCGGGGGCAGCAGGGAAGGCACCCTCCGGCGGCCTGCTCAAGAGGATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 72 bp | AGGCATCGTCCTATTCCTCGGCACCCTTGCCACCACTaGAAGACCCGCCGGGCTCTGGGCCCCCAGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHRPIPRHPCHH*KTRRALGPQPF Trigger: GAAAGGCTGGGGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS GCA 72 bp | AGAGATGGCAGGCATCGTCCTATTCCTCGGCACCCTTaGCACCACTGCAAGACCCGCCGGGCTCTGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RDGRHRPIPRHP*HHCKTRRALGP Trigger: GGGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCTGCCATCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS CAA 72 bp | GAGAGATGGCAGGCATCGTCCTATTCCTCGGCACCCTaGCCACCACTGCAAGACCCGCCGGGCTCTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERWQASSYSSAP*PPLQDPPGSGP Trigger: GGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCTGCCATCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS CAA 90 bp | TCGCCGAGATGCAGCTGCAGGCGGCGGTTGACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCGCTCACCTTCTCGGCTTCGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRCSCRRRLTSRMR*LWSSIALTFSASAR Trigger: GCGAGCCGAAGCCGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCATCTCGGCGA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 90 bp | AGAACCCGGGAGAGATGGCAGGCATCGTCCTATTCCTCGGCACCCTaGCCACCACTGCAAGACCCGCCGGGCTCTGGGCCCCCAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RTRERWQASSYSSAP*PPLQDPPGSGPPAF Trigger: AAAGGCTGGGGGCCCAGAGCCCGGCGGGTCTTGCAGTGGTGGCAAGGGTGCCGAGGAATAGGACGATGCCTGCCATCTCTCCCGGGTTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
||
| CDS GCA 72 bp | TCCCACTCAACACGTGCTTGGGCAGCACTTCTGGGCTaGTCCCTGGATGTGGGTGCCTCTGCTGCTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHSTRAWAALLG*SLDVGASAARG Trigger: GCCCCGAGCAGCAGAGGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAGCACGTGTTGAGTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 72 bp | TGCAGGCGGCGGTTGACCTCGCGAATGAGGTTGCTGTaGTCCAGCATCGCGCTCACCTTCTCGGCTTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRRRLTSRMRLL*SSIALTFSASA Trigger: AGCCGAAGCCGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 72 bp | AGGGCTCCCACTCAACACGTGCTTGGGCAGCACTTCTaGGCTGCTCCCTGGATGTGGGTGCCTCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAPTQHVLGQHF*AAPWMWVPLLL Trigger: GAGCAGCAGAGGCACCCACATCCAGGGAGCAGCCCAGAAGTGCTGCCCAAGCACGTGTTGAGTGGGAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 72 bp | TGCAGCTGCAGGCGGCGGTTGACCTCGCGAATGAGGTaGCTGTGGTCCAGCATCGCGCTCACCTTCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSCRRRLTSRMR*LWSSIALTFSA Trigger: AGCCGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 72 bp | CCTCGGATCTCGCCGAGATGCAGCTGCAGGCGGCGGTaGACCTCGCGAATGAGGTTGCTGTGGTCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PRISPRCSCRRR*TSRMRLLWSSI Trigger: GATGCTGGACCACAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCATCTCGGCGAGATCCGAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 72 bp | CAGGGCTCCCTCCACTGTGCCTGGTGTGTTCCGGGCTaGCTCCTGGCCTATGCTTCTGGAAATGTTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSLHCAWCVPG*LLAYASGNVQG Trigger: GCCCTGAACATTTCCAGAAGCATAGGCCAGGAGGCAGCCCGGAACACACCAGGCACAGTGGAGGGAGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CCA 72 bp | CTCTGCTGCTCGGGGCTGCCCTTGCACAAGGGCTTGTaGTGCTCAGGGCTGGGTCCTTTCAGTGCTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCCSGLPLHKGL*CSGLGPFSALE Trigger: CTCCAAAGCACTGAAAGGACCCAGCCCTGAGCACCACAAGCCCTTGTGCAAGGGCAGCCCCGAGCAGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 72 bp | ATATCCTTGAGCCCTCGGATCTCGCCGAGATGCAGCTaGAGGCGGCGGTTGACCTCGCGAATGAGGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ISLSPRISPRCS*RRRLTSRMRLL Trigger: CAGCAACCTCATTCGCGAGGTCAACCGCCGCCTGCAGCTGCATCTCGGCGAGATCCGAGGGCTCAAGGATAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 90 bp | GGCCACTTCCTTGTGCATCACTCCAGCTGTGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCTTTTGCCTTTCTGCCGGTCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: GHFLVHHSSCVATQS*PLPGHPFAFLPVII Trigger: GATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTACACAGCTGGAGTGATGCACAAGGAAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 90 bp | GAAGCCCTGGGTTTGTGTAGATGTTCAGGGCTAGTGCTCCTGTGTTaGGTGTGCTCTGGGCTGCCCTCGCTCCGGGGCTTCTGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: EALGLCRCSGLVLLC*VCSGLPSLRGFCKC Trigger: ACATTTACAGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAGCACTAGCCCTGAACATCTACACAAACCCAGGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS TCA 72 bp | TGGTGCTCAGGGCTGGGTCCTTTCAGTGCTTTGGAGTaGTCTGGGGTCCCAGAAGCCCTGGGTTTGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WCSGLGPFSALE*SGVPEALGLCR Trigger: TCTACACAAACCCAGGGCTTCTGGGACCCCAGATCACTCCAAAGCACTGAAAGGACCCAGCCCTGAGCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS GCA 72 bp | TGTAGATGTTCAGGGCTAGTGCTCCTGTGTTTGGTGTaGTCTGGGCTGCCCTCGCTCCGGGGCTTCTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: CRCSGLVLLCLV*SGLPSLRGFCK Trigger: TTTACAGAAGCCCCGGAGCGAGGGCAGCCCAGAGCACACCAAACACAGGAGCACTAGCCCTGAACATCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
||
| CDS CAA 72 bp | CTTGTGCATCACTCCAGCTGTGTAGCGACCCAATCTTaGCCACTCCCGGGACACCCTTTTGCCTTTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVHHSSCVATQS*PLPGHPFAFLP Trigger: CGGCAGAAAGGCAAAAGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCTACACAGCTGGAGTGATGCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CAA 90 bp | CGGGGCTTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATGGTGTTaGTGGTGGTCAGGACTATCAGTACTGCCAGTGCTAGAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGFCKCSGLPPLAWC*WWSGLSVLPVLEVL Trigger: CAGCACCTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAAGCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 72 bp | TGTTCAGGGCTTCCCCCACTGGCATGGTGTTTGTGGTaGTCAGGACTATCAGTACTGCCAGTGCTAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CSGLPPLAWCLW*SGLSVLPVLEV Trigger: CACCTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 72 bp | CCGCCGGGCTCTGGGCCCCCAGCCTTTCTCCATATTTaGGCTGTTTCTAGTTGGAGGTTGACTTCTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: PPGSGPPAFLHI*AVSSWRLTSIL Trigger: CAGAATAGAAGTCAACCTCCAACTAGAAACAGCTCAAATATGGAGAAAGGCTGGGGGCCCAGAGCCCGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146385.9 ENSMUST00000160016.8 |
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| CDS GCA 72 bp | AATCTTTGCCACTCCCGGGACACCCTTTTGCCTTTCTaGCGGTCATCATCCAGGAAACAGCATAGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: NLCHSRDTLLPF*RSSSRKQHRSL Trigger: GAGGGACCTATGCTGTTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGGAGTGGCAAAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS GCA 72 bp | AGCGACCCAATCTTTGCCACTCCCGGGACACCCTTTTaGCTTTCTGCCGGTCATCATCCAGGAAACAGCATA | + |
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Preference number: 6 (lower is better) Translates to: SDPIFATPGTPF*LSAGHHPGNSI Trigger: TATGCTGTTTCCTGGATGATGACCGGCAGAAAGGCAAAAGGGTGTCCCGGGAGTGGCAAAGATTGGGTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 72 bp | AAATGTTCAGGGCTTCCCCCACTGGCATGGTGTTTGTaGTGGTCAGGACTATCAGTACTGCCAGTGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: KCSGLPPLAWCL*WSGLSVLPVLE Trigger: CTCTAGCACTGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CCA 72 bp | GGCTTCTGTAAATGTTCAGGGCTTCCCCCACTGGCATaGTGTTTGTGGTGGTCAGGACTATCAGTACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GFCKCSGLPPLA*CLWWSGLSVLP Trigger: TGGCAGTACTGATAGTCCTGACCACCACAAACACCATGCCAGTGGGGGAAGCCCTGAACATTTACAGAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CAA 72 bp | ACTTGCATGTTTGTGATCAGGGCTGGCCCCGTAATGTaGTTTGAGATGCTCTGGGCTTGTTCCCCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TCMFVIRAGPVM*FEMLWACSPGS Trigger: AGAGCCAGGGGAACAAGCCCAGAGCATCTCAAACAACATTACGGGGCCAGCCCTGATCACAAACATGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS CAA 90 bp | TGCCGGTCATCATCCAGGAAACAGCATAGGTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGGTTAATATCCTTGAGCCCTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: CRSSSRKQHRSLSSW*SSWSFWLISLSPRI Trigger: GATCCGAGGGCTCAAGGATATTAACCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGACCTATGCTGTTTCCTGGATGATGACCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 72 bp | ACAACCTTAAGAGAATGTACCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCACTGAAGCTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TTLRECTTGSGC*EGVVCPLKLAG Trigger: TCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCTGTGGTACATTCTCTTAAGGTTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093253.10 ENSMUST00000146385.9 ENSMUST00000160016.8 |
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| CDS TCA 72 bp | AAGACCTTAAGAGAATGTACCACAGGTTCAGGCTGCTaGGAAGGTGTGGTATGTCCACTGAAGCTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KTLRECTTGSGC*EGVVCPLKLAG Trigger: TCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCTGTGGTACATTCTCTTAAGGTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140601.3 |
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| CDS CAA 72 bp | TCATCCAGGAAACAGCATAGGTCCCTCAGTTCCTGGTaGTCTTCCTGGAGTTTCTGGTTAATATCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRKQHRSLSSW*SSWSFWLISLS Trigger: GCTCAAGGATATTAACCAGAAACTCCAGGAAGACAACCAGGAACTGAGGGACCTATGCTGTTTCCTGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042534.15 ENSMUST00000093253.10 ENSMUST00000109502.9 ENSMUST00000146385.9 |
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| CDS TCA 72 bp | GTCTCACTAAGGTCATGGCCATACTCTTTACCCTGCTaGCGATCTATAGTTTCCTCAACATCCAAGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: VSLRSWPYSLPC*RSIVSSTSKTL Trigger: TAAGGTCTTGGATGTTGAGGAAACTATAGATCGTCAGCAGGGTAAAGAGTATGGCCATGACCTTAGTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140601.3 |
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| CDS CAA 90 bp | AGAGAGAGAGAGACCTTGGATTTCTTATTCAATATTATGTCTCCATaGCCTAAACAAGTGTCCTGGGGCAGCATGCGATTTTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RERETLDFLFNIMSP*PKQVSWGSMRFSSS Trigger: GGAAGAAGAAAATCGCATGCTGCCCCAGGACACTTGTTTAGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCTCTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
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| CDS CAA 72 bp | GAGACCTTGGATTTCTTATTCAATATTATGTCTCCATaGCCTAAACAAGTGTCCTGGGGCAGCATGCGATTT | + |
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Preference number: 6 (lower is better) Translates to: ETLDFLFNIMSP*PKQVSWGSMRF Trigger: AAATCGCATGCTGCCCCAGGACACTTGTTTAGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
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| CDS GCA 72 bp | AGACCTTGGATTTCTTATTCAATATTATGTCTCCATTaGCTAAACAAGTGTCCTGGGGCAGCATGCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: RPWISYSILCLH*LNKCPGAACDF Trigger: AAAATCGCATGCTGCCCCAGGACACTTGTTTAGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
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| CDS CAA 90 bp | TGGGTAGCCTGTTTAACTGTAAACTGCATGAGAGAGAGAGAGACCTaGGATTTCTTATTCAATATTATGTCTCCATTGCCTAAACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: WVACLTVNCMRERET*DFLFNIMSPLPKQV Trigger: CACTTGTTTAGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCTCTCTCTCTCTCATGCAGTTTACAGTTAAACAGGCTACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
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| CDS CAA 72 bp | TGTTTAACTGTAAACTGCATGAGAGAGAGAGAGACCTaGGATTTCTTATTCAATATTATGTCTCCATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CLTVNCMRERET*DFLFNIMSPLP Trigger: AGGCAATGGAGACATAATATTGAATAAGAAATCCAAGGTCTCTCTCTCTCTCATGCAGTTTACAGTTAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160016.8 |
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