Pregenerated sensors for CCDC84 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043923Ensembl transcript IDs: ENSMUST00000053286.9, ENSMUST00000213813.2, ENSMUST00000214494.2, ENSMUST00000214702.2, ENSMUST00000214748.2, ENSMUST00000216572.2, ENSMUST00000217270.2, ENSMUST00000217351.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTaGAAGACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: ARPSVIPAVSWRLHG*KTGEPGWQMRSLST Trigger: GGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
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| 3UTR TCA 90 bp | GCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTaGAAGACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACT | + |
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Preference number: 1 (lower is better) Translates to: ARPSVIPAVSWRLHG*KTGEPGWQMRSLST Trigger: AGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| 3UTR CCA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: GCKAKCDTCCELEAT*LKDRGARLADEVLE Trigger: CTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| 3UTR GCA 90 bp | GTAAAGATCAGATTGGCTCCCATTTCCCAGCATCTACCTCCCAAGTaGCCTGAGGACTTACCCGTTGGTCGCTTTCCAACTTTCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: VKIRLAPISQHLPPK*PEDLPVGRFPTFRC Trigger: GCACCTGAAAGTTGGAAAGCGACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCTGGGAAATGGGAGCCAATCTGATCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CCA 90 bp | GGCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATaGCGATACATACTTCAATCCCAGCAGTCAGGAGGCAGAAACAGC | + |
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Preference number: 1 (lower is better) Translates to: GQWEQRVTLCQNSWV*RYILQSQQSGGRNS Trigger: GCTGTTTCTGCCTCCTGACTGCTGGGATTGAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR TCA 90 bp | CATGAGAGCTTAGTGCCCCTCCTCTGGTTTGCTTGCTCTTGTACCTaGTGGCCAATGAATGTTAGTTGCTGTCCTGTCTCCATCCAATCA | + |
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Preference number: 1 (lower is better) Translates to: HESLVPLLWFACSCT*WPMNVSCCPVSIQS Trigger: TGATTGGATGGAGACAGGACAGCAACTAACATTCATTGGCCATCAGGTACAAGAGCAAGCAAACCAGAGGAGGGGCACTAAGCTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CCA 90 bp | CGGGGTAAAGTTAAAACTGAGAAGGTACTGGATTTCAGGGCAGGGTaGCTAGTTTCAGATGCCTGTATGGGTAGTGAAGTGTGGACACTC | + |
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Preference number: 1 (lower is better) Translates to: RGKVKTEKVLDFRAG*LVSDACMGSEVWTL Trigger: GAGTGTCCACACTTCACTACCCATACAGGCATCTGAAACTAGCCACCCTGCCCTGAAATCCAGTACCTTCTCAGTTTTAACTTTACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CCA 90 bp | ACTCAAGGCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTaGGTATGGCGATACATACTTCAATCCCAGCAGTCAGGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TQGQWEQRVTLCQNS*VWRYILQSQQSGGR Trigger: TCTGCCTCCTGACTGCTGGGATTGAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGCCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR TCA 90 bp | TTCAGATATACCAAAAGAGGCTTCAGATCTCATTTTGGATGGTTGTaGGCCACCATGTGTTTGCTGGGATTTGAACTCAGGGCCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: FRYTKRGFRSHFGWL*ATMCLLGFELRAFR Trigger: CCTGAAGGCCCTGAGTTCAAATCCCAGCAAACACATGGTGGCTCACAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGTATATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGGGCCTTCAGGAGAGCAGTCATTGCGCTTAGCCTCTGAGCCATCTCTCACCTCCCAAGTGCCCTaGGGACTTACCCGTTGGTCG | + |
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Preference number: 2 (lower is better) Translates to: NSGPSGEQSLRLASEPSLTSQVP*GLTRWS Trigger: CGACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGT...GAGAGATGGCTCAGAGGCTAAGCGCAATGACTGCTCTCCTGAAGGCCCTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CAA 90 bp | GGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGAGTTACAGCTAGGGTaGCTAGTCAGCACCTGTCTCCATTCCATGACTTCAGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLPALGSQVLELQLG*LVSTCLHSMTSGLK Trigger: CTTCAGCCCTGAAGTCATGGAATGGAGACAGGTGCTGACTAGCAACCCTAGCTGTAACTCCAGCACTTGGGACCCTAAGGCAGGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGCTCCTCGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: EKFLIGGSYWEAARAVLLELEAT*LKDRGA Trigger: GGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTC...GAGGAGCACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: KAKCDTCCELEATWLKDRELEAT*LKDRGA Trigger: GGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTC...CCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| 3UTR CAA 90 bp | CCATTTCCCAGCATCTACCTCCCAAGTGCCCTGAGGACTTACCCGTaGGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCCTCTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PFPSIYLPSALRTYP*VAFQLSGAEEPSSG Trigger: TCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCTGGGAAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGTGGAGGCTACATGGCTaGAAGACAGGGGAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FFEKFLIGGSYWEAARAVWRLHG*KTGEPG Trigger: GCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCA...CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCAAAATGAAGGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGAGTTACAGGCCCCTCCTCTGGTTTaGTTGCTCTTGTACCTGATG | + |
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Preference number: 2 (lower is better) Translates to: WLQNEGLPALGSQVLELQAPPLV*LLLYLM Trigger: CATCAGGTACAAGAGCAAGCAAACCAGAGGAGGGGC...CTGTAACTCCAGCACTTGGGACCCTAAGGCAGGGAGGCCTTCATTTTGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGAACTCAAGGCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGCCCTGCCCACATCTCTaGACCTGCCCCCAGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: SRTQGQWEQRVTLCQNSWPCPHL*TCPQWT Trigger: TGTCCACTGGGGGCAGGTCCAGAGATGTGGGCAGGG...CCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGCCTTGAGTTCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAAGCTCTGCAACAGGTTaGAAGGCCAAGTGTGATACC | + |
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Preference number: 2 (lower is better) Translates to: GCKAKCDTCCELEATWLKSSATG*KAKCDT Trigger: GGTATCACACTTGGCCTTGCAACCTGTTGCAGAGCT...TTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGGGGAGGTGTGGCACCTaGGTGAATGTTACCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: FFEKFLIGGSYWEAARAVGRCGT*VNVTNS Trigger: GGAATTGGTAACATTCACTCAGGTGCCACACCTCCC...CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTACCCGTTGGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCCTCTTCTGGAAGCTCTGCAACAGGTTaGAAGGCCAAGTGTGATACC | + |
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Preference number: 2 (lower is better) Translates to: TYPLVAFQLSGAEEPSSGSSATG*KAKCDT Trigger: GGTATCACACTTGGCCTTGCAACCTGTTGCAGAGCT...TCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGCTCAGCTCTGCAACAGGTTaGAAGGCCAAGTGTGATACC | + |
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Preference number: 2 (lower is better) Translates to: FEKFLIGGSYWEAARAVLSSATG*KAKCDT Trigger: GGTATCACACTTGGCCTTGCAACCTGTTGCAGAGCT...GAGCACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTTGGAAGGAGTACTTGTAAGTGTATACACCCCAGCATTACAGTAATCTCCGCCAACCCCCAGCCCTaGCCACATCTCTGGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: SFGRSTCKCIHPSITVISANPQP*PHLWTC Trigger: GCAGGTCCAGAGATGTGGGCAGGGCTGGGGGTTGGC...GGAGATTACTGTAATGCTGGGGTGTATACACTTACAAGTACTCCTTCCAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGTCATTGCGCTTAGCCTCTGAGCCATCTCTCCAGCCGGCATCATTGTATCGCAGACCCAGAAACTaGTCAGAAACTTACCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: EQSLRLASEPSLQPASLYRRPRN*SETYLS Trigger: ACTCAGGTAAGTTTCTGAGCAGTTTCTGGGTCTGCG...ATACAATGATGCCGGCTGGAGAGATGGCTCAGAGGCTAAGCGCAATGACTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACATACTTCGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GNKGLPCVKIAGYGDTYFELEAT*LKDRGA Trigger: GGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTC...GAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACACCAACTTTCAGGTGCTaGAGAGCCCTCTTCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: ANGNKGLPCVKIAGYGDTPTFRC*RALFWI Trigger: GATCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGG...TGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGCCAATGAATGTTAGTTaGTGTCCTGTCTCCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: KAKCDTCCELEATWLKDRPMNVS*CPVSIQ Trigger: TTGGATGGAGACAGGACAGCAACTAACATTCATTGG...CCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000217351.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTGTCTTCAGATATACCAAAAGAGGCTTCAGATCTCATTTTGGATGGTTGGCCCTCTTCTGGATCTaGCTCTGCCTGAGGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VAVFRYTKRGFRSHFGWLALFWI*LCLRLS Trigger: ACTCAGCCTCAGGCAGAGTCAGATCCAGAAGAGGGC...CAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGTATATCTGAAGACAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAAAGTTGGCGCCAACTCTATCTGGAGGGAGTTTCTTCAGTTTTTGTTTTATAGGAGGGTCCTATTaGGAGGCTGCCAGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: WSKLAPTLSGGSFFSFCFIGGSY*EAARAV Trigger: CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTAT...AAAACAAAAACTGAAGAAACTCCCTCCAGATAGAGTTGGCGCCAACTTTGACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAAAGTTGGCGCCAACTCTATCTGGAGGGAGTTTCTTCAGTTTTTGTTTTGGGAGGTGTGGCACCTaGGTGAATGTTACCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: WSKLAPTLSGGSFFSFCFGRCGT*VNVTNS Trigger: GGAATTGGTAACATTCACTCAGGTGCCACACCTCCC...AAAACAAAAACTGAAGAAACTCCCTCCAGATAGAGTTGGCGCCAACTTTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGTCCTTGAGCACTGAGGATGGTAAAGATCAGATTGGCTCCCATTTCCCATTCTCTGAGAAGAGCTaGCTTGAAATGCTTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: MRSLSTEDGKDQIGSHFPFSEKS*LEMLDG Trigger: CCCATCAAGCATTTCAAGTCAGCTCTTCTCAGAGAA...TGGGAAATGGGAGCCAATCTGATCTTTACCATCCTCAGTGCTCAAGGACCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CAA 90 bp | TCAAATGAATGGGTGCATCTGTTTCCTAAGGCAGCCGGGGAGGATTaGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SNEWVHLFPKAAGED*VLGIIAGIGLLAMK Trigger: CTTCATGGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGCCTTAGGAAACAGATGCACCCATTCATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTCCAATGAATGTTAGTTaGTGTCCTGTCTCCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: LFFEKFLIGGSYWEAARAPMNVS*CPVSIQ Trigger: TTGGATGGAGACAGGACAGCAACTAACATTCATTGG...AGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| 3UTR CAA 90 bp | ATGCCTGTATGGGTAGTGAAGTGTGGACACTCTATATTGAACAGGTaGAGACAACGAGGGACAGCAGTTAGGAAAAAGATCACTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MPVWVVKCGHSILNR*RQRGTAVRKKITER Trigger: CCTTTCAGTGATCTTTTTCCTAACTGCTGTCCCTCGTTGTCTCAACCTGTTCAATATAGAGTGTCCACACTTCACTACCCATACAGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTAAAGGTGGTGATAGGGCACACCTTTAATCCCAGGCAAAGGCAGGTGAATGCTCAGAAACTTACCTaGGTGAATGTTACCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: MLKVVIGHTFNPRQRQVNAQKLT*VNVTNS Trigger: GGAATTGGTAACATTCACTCAGGTAAGTTTCTGAGC...ATTCACCTGCCTTTGCCTGGGATTAAAGGTGTGCCCTATCACCACCTTTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CCA 90 bp | TCATTTGGAAGGAGTACTTGTAAGTGTATACACCCCAGCATTACAGTAATCTCCTTTCAGATGCCTGTATaGGTAGTGAAGTGTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: SFGRSTCKCIHPSITVISFQMPV*VVKCGH Trigger: GTGTCCACACTTCACTACCCATACAGGCATCTGAAA...GGAGATTACTGTAATGCTGGGGTGTATACACTTACAAGTACTCCTTCCAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CCA 72 bp | GCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCCAGGCCGTTGGTCGCT | + |
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Preference number: 3 (lower is better) Translates to: AKCDTCCELEAT*LKDRGARPLVA Trigger: AGCGACCAACGGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR CCA 72 bp | GCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATaGCTGAAAGACAGGGGAGCCAGGCTGGCAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: AKCDTCCELEAT*LKDRGARLADE Trigger: CTCATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| 3UTR GCA 72 bp | AGATTGGCTCCCATTTCCCAGCATCTACCTCCCAAGTaGCCTGAGGACTTACCCGTTGGTCGCTTTCCAACT | + |
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Preference number: 3 (lower is better) Translates to: RLAPISQHLPPK*PEDLPVGRFPT Trigger: AGTTGGAAAGCGACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCTGGGAAATGGGAGCCAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTCAAAATGAAGGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGAGTTACAGCTGAGAAGAGCTGACTaGAAATGCTTGATGGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: WLQNEGLPALGSQVLELQLRRAD*KCLMGE Trigger: TTCCCCCATCAAGCATTTCAAGTCAGCTCTTCTCAG...CTGTAACTCCAGCACTTGGGACCCTAAGGCAGGGAGGCCTTCATTTTGAAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACACCTCCTCTGGTTTGCTaGCTCTTGTACCTGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: ANGNKGLPCVKIAGYGDTPPLVC*LLYLMA Trigger: GGCCATCAGGTACAAGAGCAAGCAAACCAGAGGAGG...TGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR TCA 72 bp | ACATCTCTGGACCTGCCCCCAGTGGACATGGTGGTGTaGACCGTTAGTTCTCTGAGAAGAGCTGACTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: TSLDLPPVDMVV*TVSSLRRADLK Trigger: TTTCAAGTCAGCTCTTCTCAGAGAACTAACGGTTCACACCACCATGTCCACTGGGGGCAGGTCCAGAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR TCA 72 bp | TACGTGGTTGCTTGCTTCTTGTTGCAGCTTCGGTTTTaGATTGATGCCTGGACTGCCAGCGGCGTCCATTAT | + |
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Preference number: 3 (lower is better) Translates to: YVVACFLLQLRF*IDAWTASGVHY Trigger: ATAATGGACGCCGCTGGCAGTCCAGGCATCAATTCAAAACCGAAGCTGCAACAAGAAGCAAGCAACCACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR GCA 72 bp | GATCTCATTTTGGATGGTTGTGAGCCACCATGTGTTTaGTGGGATTTGAACTCAGGGCCTTCAGGAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLILDGCEPPCV*WDLNSGPSGEQ Trigger: CTGCTCTCCTGAAGGCCCTGAGTTCAAATCCCAGCAAACACATGGTGGCTCACAACCATCCAAAATGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CCA 72 bp | GCTTTGGACAGTGCTACTTTAGTACTTCTAAGGAACTaGCCAGTAACTAAGGACAGCCCCAAGGTAGACGGG | + |
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Preference number: 3 (lower is better) Translates to: ALDSATLVLLRN*PVTKDSPKVDG Trigger: CCCGTCTACCTTGGGGCTGTCCTTAGTTACTGGCCAGTTCCTTAGAAGTACTAAAGTAGCACTGTCCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTTGGCGCCAACTCTATCTGGAGGGAGTTTCTTCAGTTTTTGTTTTTCCTCATAGGAGGGTCCTATaGGGAGGCTGCCAGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QSWRQLYLEGVSSVFVFPHRRVL*GGCQSC Trigger: ACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATG...AGGAAAAACAAAAACTGAAGAAACTCCCTCCAGATAGAGTTGGCGCCAACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| 3UTR TCA 72 bp | TTAATGGTTTCACTATACCTCAACCTGGCTTCAAAATaGAGGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LMVSLYLNLASK*RPPCLRVPSAG Trigger: TCCAGCACTTGGGACCCTAAGGCAGGGAGGCCTTCATTTTGAAGCCAGGTTGAGGTATAGTGAAACCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CCA 72 bp | GAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATaGCGATACATACTTCAATCCCAGCAGTCAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EQRVTLCQNSWV*RYILQSQQSGG Trigger: GCCTCCTGACTGCTGGGATTGAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR GCA 72 bp | GCAAACTTTAGGGGAGGGGAACACAGCTTTGGACAGTaGTACTTTAGTACTTCTAAGGAACTGGCCAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ANFRGGEHSFGQ*YFSTSKELASN Trigger: GTTACTGGCCAGTTCCTTAGAAGTACTAAAGTAGCACTGTCCAAAGCTGTGTTCCCCTCCCCTAAAGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR GCA 72 bp | CAGTCAGGAGGCAGAAACAGCCAGGGCTACATAGACTaGAAACAACAGAAACCAAAAGATAATCTCGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSGGRNSQGYID*KQQKPKDNLAD Trigger: GTCTGCGAGATTATCTTTTGGTTTCTGTTGTTTGCAGTCTATGTAGCCCTGGCTGTTTCTGCCTCCTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CCA 72 bp | GTTAAAACTGAGAAGGTACTGGATTTCAGGGCAGGGTaGCTAGTTTCAGATGCCTGTATGGGTAGTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VKTEKVLDFRAG*LVSDACMGSEV Trigger: CACTTCACTACCCATACAGGCATCTGAAACTAGCCACCCTGCCCTGAAATCCAGTACCTTCTCAGTTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACATACTTCATGGTAAAGATCAGATaGGCTCCCATTTCCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GNKGLPCVKIAGYGDTYFMVKIR*APISQH Trigger: ATGCTGGGAAATGGGAGCCAATCTGATCTTTACCAT...GAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR TCA 72 bp | ACCAAAAGAGGCTTCAGATCTCATTTTGGATGGTTGTaGGCCACCATGTGTTTGCTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKRGFRSHFGWL*ATMCLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAAACACATGGTGGCTCACAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CCA 72 bp | TGGCTAGTTTCAGATGCCTGTATGGGTAGTGAAGTGTaGACACTCTATATTGAACAGGTTGAGACAACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WLVSDACMGSEV*TLYIEQVETTR Trigger: CCTCGTTGTCTCAACCTGTTCAATATAGAGTGTCCACACTTCACTACCCATACAGGCATCTGAAACTAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CCA 72 bp | CAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTaGGTATGGCGATACATACTTCAATCCCAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QWEQRVTLCQNS*VWRYILQSQQS Trigger: TGACTGCTGGGATTGAAGTATGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CCA 72 bp | CTTCAGATATACCAAAAGAGGCTTCAGATCTCATTTTaGATGGTTGTGAGCCACCATGTGTTTGCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LQIYQKRLQISF*MVVSHHVFAGI Trigger: AATCCCAGCAAACACATGGTGGCTCACAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGTATATCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR TCA 72 bp | ATAAGAAAGCCACAAGATAACATATTCATAAGCAACTaGCAGCAAACTTTAGGGGAGGGGAACACAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IRKPQDNIFISN*QQTLGEGNTAL Trigger: CAAAGCTGTGTTCCCCTCCCCTAAAGTTTGCTGTCAGTTGCTTATGAATATGTTATCTTGTGGCTTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATGCCCTCTTCTGGATCTaGCTCTGCCTGAGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCELEATWLKDRGARLADALFWI*LCLRCA Trigger: AGCGCACCTCAGGCAGAGTCAGATCCAGAAGAGGGC...ATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTTGGTCGCTTCTGCCTGAGGTGCGCTaGGTCCTCCGAGGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPSVIPAVSWRLHGRWSLLPEVR*VLRGKP Trigger: TGGTTTCCCTCGGAGGACCCAGCGCACCTCAGGCAG...AAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214702.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGCCTGAGGTGCGCTaGGTCCTCCGAGGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: CDTCCELEATWLKDRGARLPEVR*VLRGKP Trigger: TGGTTTCCCTCGGAGGACCCAGCGCACCTCAGGCAG...CCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGATCTGACTCTGCCTaGGGTGCGCTGGGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAKCDTCCELEATWLKDRGSDSA*GALGPP Trigger: CGGAGGACCCAGCGCACCTCAGGCAGAGTCAGATCC...CCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCCATTTCCCAGCATCTACCTCCCAAGTGCCCTGAGGACTTACCCGTTGGTGCCCTCTTCTGGATCTaGCTCTGCCTGAGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: APISQHLPPKCPEDLPVGALFWI*LCLRCA Trigger: AGCGCACCTCAGGCAGAGTCAGATCCAGAAGAGGGC...ACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCTGGGAAATGGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCTGCCTGAGGTGCGCTaGGTCCTCCGAGGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QQVARPSVIPAVSWRLHGLPEVR*VLRGKP Trigger: TGGTTTCCCTCGGAGGACCCAGCGCACCTCAGGCAG...GCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR GCA 90 bp | GATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGAGTGGATTTGGATACTaGGCTGGGTCCTCCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTCCELEATWLKDRGARLSGFGY*AGSSEG Trigger: TCCCTCGGAGGACCCAGCGCAGTATCCAAATCCACT...CAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACCGTTGGTCGCTTTCCAACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TGEPGWQMRSLSTVGRFPTVRLP*LRCFRT Trigger: AGTGCGAAAACACCTGAGCCATGGCAACCTGACAGT...TGGAAAGCGACCAACGGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
||
| 3UTR CAA 72 bp | TGGGATTTGAACTCAGGGCCTTCAGGAGAGCAGTCATaGCGCTTAGCCTCTGAGCCATCTCTCCAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WDLNSGPSGEQS*RLASEPSLQPA Trigger: TGCCGGCTGGAGAGATGGCTCAGAGGCTAAGCGCAATGACTGCTCTCCTGAAGGCCCTGAGTTCAAATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGCTCGCCCTCTTCTGGATCTaGCTCTGCCTGAGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEKFLIGGSYWEAARAVLALFWI*LCLRCA Trigger: AGCGCACCTCAGGCAGAGTCAGATCCAGAAGAGGGC...GAGCACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATCCACAGAAGAAAGTTTaGCGACACAGAGGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: CCELEATWLKDRGARLADPQKKV*RHRGHR Trigger: GCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGG...ATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGATGAGGTCCTTGAGCACTGAGGATGGTAAAGATCAGATTGGCTCCCATCTGCCTGAGGTGCGCTaGGTCCTCCGAGGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: WQMRSLSTEDGKDQIGSHLPEVR*VLRGKP Trigger: TGGTTTCCCTCGGAGGACCCAGCGCACCTCAGGCAG...ATGGGAGCCAATCTGATCTTTACCATCCTCAGTGCTCAAGGACCTCATCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217351.2 |
||
| 3UTR CAA 72 bp | AGCATCTACCTCCCAAGTGCCCTGAGGACTTACCCGTaGGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYLPSALRTYP*VAFQLSGAEEP Trigger: GGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCCGTTGGTCGCTTTCCAACTCTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGYMAERQGSQAVGRFPTLTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...AGTTGGAAAGCGACCAACGGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACCGTTGGTCGCTTCTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDRGARLADEVLEHRWSLLTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...AAGCGACCAACGGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QVARPSVIPAVSWRLHGRTVRLP*LRCFRT Trigger: AGTGCGAAAACACCTGAGCCATGGCAACCTGACAGT...ACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214702.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATGAGACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CELEATWLKDRGARLADETRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...CTCATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | GATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTCCELEATWLKDRGARLTRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...CAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGCCCTCTTCTGGATCTaGCTCTGCCTGAGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFFEKFLIGGSYWEAARAALFWI*LCLRCA Trigger: AGCGCACCTCAGGCAGAGTCAGATCCAGAAGAGGGC...AGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
||
| CDS-3UTR GCA 90 bp | GCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGACCACAGAAGAAAGTTTaGCGACACAGAGGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: AKCDTCCELEATWLKDRGPQKKV*RHRGHR Trigger: GCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGG...TCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCGTCCTATTGGGAGGCTaGCAGAGCTGTGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGEDLVLGIIAGIGLLAVLLGG*QSCAPP Trigger: AGGAGGAGCACAGCTCTGGCAGCCTCCCAATAGGAC...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTTGGTCGCTTACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSVIPAVSWRLHGRWSLTRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...AAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214702.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCCGTTGGTCGCTTTCCAACTAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGYMAERQGSQAVGRFPTNFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...AGTTGGAAAGCGACCAACGGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
||
| CDS-3UTR CCA 90 bp | GATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTCCELEATWLKDRGARLNFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...CAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| 3UTR CAA 72 bp | GCCTTAGGGTCCCAAGTGCTGGAGTTACAGCTAGGGTaGCTAGTCAGCACCTGTCTCCATTCCATGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGSQVLELQLG*LVSTCLHSMTS Trigger: TGAAGTCATGGAATGGAGACAGGTGCTGACTAGCAACCCTAGCTGTAACTCCAGCACTTGGGACCCTAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| 3UTR CAA 72 bp | TTGGATGGTTGTGAGCCACCATGTGTTTGCTGGGATTaGAACTCAGGGCCTTCAGGAGAGCAGTCATTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LDGCEPPCVCWD*NSGPSGEQSLR Trigger: GCGCAATGACTGCTCTCCTGAAGGCCCTGAGTTCAAATCCCAGCAAACACATGGTGGCTCACAACCATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCGGATCTGACTCTGCCTaGGGCTCTAAGACAGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGEDLVLGIIAGIGLLAGSDSA*GSKTDR Trigger: CCGATCTGTCTTAGAGCCTCAGGCAGAGTCAGATCC...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCAGGCTGCCAGAGCTGTaGTCCTCCTCTTGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: AAGEDLVLGIIAGIGLLARLPEL*SSSWII Trigger: GATGATCCAAGAGGAGGAGCACAGCTCTGGCAGCCT...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGCTTCAAAATGAAGGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGAGTTAACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TWLQNEGLPALGSQVLELTVRLP*LRCFRT Trigger: AGTGCGAAAACACCTGAGCCATGGCAACCTGACAGT...TAACTCCAGCACTTGGGACCCTAAGGCAGGGAGGCCTTCATTTTGAAGCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR GCA 90 bp | GATTTCAGGGCAGGGTGGCTAGTTTCAGATGCCTGTATGGGTAGTGAAGTGTGGCCACAGAAGAAAGTTTaGCGACACAGAGGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: DFRAGWLVSDACMGSEVWPQKKV*RHRGHR Trigger: GCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGG...CCACACTTCACTACCCATACAGGCATCTGAAACTAGCCACCCTGCCCTGAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR CCA 90 bp | GCAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGCKAKCDTCCELEATWNFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...CCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FFEKFLIGGSYWEAARAVTVRLP*LRCFRT Trigger: AGTGCGAAAACACCTGAGCCATGGCAACCTGACAGT...CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGCTTCAAAATGAAGGCCTCCCTGCCTTAGGGTCCCAAGTGCTGGAGTTAAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWLQNEGLPALGSQVLELNFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...TAACTCCAGCACTTGGGACCCTAAGGCAGGGAGGCCTTCATTTTGAAGCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCKAKCDTCCELEATWLKNFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...TTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAATAGGAGGGTCCTATTaGGAGGCTGCCAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEIGGSY*EAARAV Trigger: CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTAT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
||
| CDS-3UTR CCA 90 bp | GCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACAATTTGGATACTGCGCTaGGTCCTCCGAGGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ANGNKGLPCVKIAGYGDTIWILR*VLRGKP Trigger: TGGTTTCCCTCGGAGGACCCAGCGCAGTATCCAAAT...TGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| CDS-3UTR GCA 90 bp | CTTTTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTCCACAGAAGAAAGTTTaGCGACACAGAGGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFEKFLIGGSYWEAARAPQKKV*RHRGHR Trigger: GCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGG...AGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGCTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFEKFLIGGSYWEAARAVLTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| CDS-3UTR GCA 90 bp | AGGTCCTTGAGCACTGAGGATGGTAAAGATCAGATTGGCTCCCATTTCCCAGCACTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSTEDGKDQIGSHFPALTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...TGCTGGGAAATGGGAGCCAATCTGATCTTTACCATCCTCAGTGCTCAAGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| CDS-3UTR TCA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTCCAACTTTCAGGTGCTaGAGAGCCCTCTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPPTFRC*RALFWI Trigger: GATCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGG...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR TCA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAGGTGTGGCACCTaGGTGAATGTTACCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPGRCGT*VNVTNS Trigger: GGAATTGGTAACATTCACTCAGGTGCCACACCTCCC...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR TCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAATTGCAGCTTCGGTTTTaGATTGATGCCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWELQLRF*IDAWTA Trigger: GGCAGTCCAGGCATCAATTCAAAACCGAAGCTGCAA...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAACCACAGAAGAAAGTTTaGCGACACAGAGGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEPQKKV*RHRGHR Trigger: GCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGG...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | GCCAATGGGAACAAAGGGTTACCCTGTGTCAAAATAGCTGGGTATGGCGATACACTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANGNKGLPCVKIAGYGDTLTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...TGTATCGCCATACCCAGCTATTTTGACACAGGGTAACCCTTTGTTCCCATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| CDS-3UTR GCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAAGCTCTGCAACAGGTTaGAAGGCCAAGTGTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWESSATG*KAKCDT Trigger: GGTATCACACTTGGCCTTGCAACCTGTTGCAGAGCT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWETVRLP*LRCFRT Trigger: AGTGCGAAAACACCTGAGCCATGGCAACCTGACAGT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | ATGAGGTCCTTGAGCACTGAGGATGGTAAAGATCAGATTGGCTCCCATTTCCCAACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRSLSTEDGKDQIGSHFPTRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...TGGGAAATGGGAGCCAATCTGATCTTTACCATCCTCAGTGCTCAAGGACCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCAACTTCTCTTTCATCTaGGCATTGGCCTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGEDLVLGIIAGIGLLANFSFI*ALALFS Trigger: GGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAACTCACGGATCTGAGCTaGCATCTCTTTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWELTDLS*HLFNHL Trigger: GAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAG...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCCCAATGAATGTTAGTTaGTGTCCTGTCTCCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGEDLVLGIIAGIGLLAPMNVS*CPVSIQ Trigger: TTGGATGGAGACAGGACAGCAACTAACATTCATTGG...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWETRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | CTGTGGTCAAAGTTGGCGCCAACTCTATCTGGAGGGAGTTTCTTCAGTTTTTGTACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWSKLAPTLSGGSFFSFCTRICW*LSCALG Trigger: GCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGT...ACAAAAACTGAAGAAACTCCCTCCAGATAGAGTTGGCGCCAACTTTGACCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| CDS-3UTR CCA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTTCATCCAGGGAGGTGTaGCACCTGAGTGAATGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPSSREV*HLSECY Trigger: GTAACATTCACTCAGGTGCCACACCTCCCTGGATGA...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAGGCGCCAACTCTATCTaGAGGGAGTTTCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEGANSI*REFLQF Trigger: AAACTGAAGAAACTCCCTCCAGATAGAGTTGGCGCC...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAACATTATTCCAGACTCTaGCAAAAGAAGGCAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEHYSRL*QKKATS Trigger: GCTGGTTGCCTTCTTTTGGCAGAGTCTGGAATAATG...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR GCA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTCTTTACGTGGTTGCTTaGTTCTTGTTGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPLYVVA*FLLQLR Trigger: CCGAAGCTGCAACAAGAAGCAAGCAACCACGTAAAG...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CCA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGCTTTTCCCTTTACGTaGTTGCTTGCTTCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPAFPFT*LLASCC Trigger: GCAACAAGAAGCAAGCAACCACGTAAAGGGAAAAGC...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| 3UTR CAA 72 bp | TGGGTAGTGAAGTGTGGACACTCTATATTGAACAGGTaGAGACAACGAGGGACAGCAGTTAGGAAAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WVVKCGHSILNR*RQRGTAVRKKI Trigger: GATCTTTTTCCTAACTGCTGTCCCTCGTTGTCTCAACCTGTTCAATATAGAGTGTCCACACTTCACTACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| 3UTR CAA 72 bp | TCTTCAGATATACCAAAAGAGGCTTCAGATCTCATTTaGGATGGTTGTGAGCCACCATGTGTTTGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSDIPKEASDLI*DGCEPPCVCWD Trigger: ATCCCAGCAAACACATGGTGGCTCACAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGTATATCTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| CDS GCA 90 bp | GGCTGGCCAGATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTTaGCATGGCTCAGGTGTTTTCGCACTTCGCAGCCACAGCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWPDVPADPRVALSG*HGSGVFALRSHSTG Trigger: GCCCGTGCTGTGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATCTGGCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CCA 90 bp | GCCAGATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACTTCGCAGCCACAGCACGGGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ARCSSRPPCSTVRLP*LRCFRTSQPQHGHQ Trigger: TTGGTGCCCGTGCTGTGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACCGTTGGTCGCTTTCCAACCACAGAAGAAAGTTaGCCGACACAGAGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: TGEPGWQMRSLSTVGRFPTTEES*PTQRTS Trigger: CGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGT...TGGAAAGCGACCAACGGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
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| CDS-3UTR CAA 90 bp | AAAGACAGGGGAGCCAGGCTGGCAGATGAGGTCCTTGAGCACCGTTGGTCGCTTTCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDRGARLADEVLEHRWSLSFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...AAGCGACCAACGGTGCTCAAGGACCTCATCTGCCAGCCTGGCTCCCCTGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
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| CDS CCA 90 bp | TGTTCTCCCACCAGAATTTGTTGGTGGCTTTCTTGTGCTCTGGGCTaGCCAGATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSPTRICWWLSCALG*PDVPADPRVALSGC Trigger: GCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATCTGGCCAGCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CCA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATaGCCGTTGGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCKAKCDTCCELEAT*PLVAFQLSGAEEPS Trigger: AGAGGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATACCACAGAAGAAAGTTaGCCGACACAGAGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: CCELEATWLKDRGARLADTTEES*PTQRTS Trigger: CGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGT...ATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCCGTTGGTCGCTTTCCAACTACCACAGAAGAAAGTTaGCCGACACAGAGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: GGYMAERQGSQAVGRFPTTTEES*PTQRTS Trigger: CGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGT...AGTTGGAAAGCGACCAACGGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| CDS-3UTR CAA 90 bp | GCTCCCATTTCCCAGCATCTACCTCCCAAGTGCCCTGAGGACTTACCCGTTGGTTCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: APISQHLPPKCPEDLPVGSFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...ACCAACGGGTAAGTCCTCAGGGCACTTGGGAGGTAGATGCTGGGAAATGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| CDS CCA 90 bp | CTTTCATCTGGGCATTGGCCTTGTTCTCCCACCAGAATTTGTTGGTaGCTTTCTTGTGCTCTGGGCTGGCCAGATGTTCCAGCAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSGHWPCSPTRICW*LSCALGWPDVPADP Trigger: GGGGTCTGCTGGAACATCTGGCCAGCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CCA 90 bp | AGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTTaGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCCTCTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPSVIPAVSWRLHGR*SLSNFQVLKSPLLD Trigger: ATCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTTGGTCGCTTACCACAGAAGAAAGTTaGCCGACACAGAGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: RPSVIPAVSWRLHGRWSLTTEES*PTQRTS Trigger: CGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGT...AAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214702.2 |
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| CDS-3UTR CAA 90 bp | TGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGTGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CDTCCELEATWLKDRGARCSTVR*PWLRCF Trigger: AAAACACCTGAGCCATGGCAACCTGACAGTGCTACA...CCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCELEATWLKDRGARLADSHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...ATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTCCELEATWLKDRGARLSHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...CAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DTCCELEATWLKDRGARLFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...CAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCAGGCTGGCAGATTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCELEATWLKDRGARLADFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...ATCTGCCAGCCTGGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213813.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | CAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQVARPSVIPAVSWRLHGSFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...GCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GCAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATGCKAKCDTCCELEATWIWALA*FSHQNL Trigger: CAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGAT...CCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
||
| CDS-3UTR CAA 90 bp | CAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQVARPSVIPAVSWRLHGIWALA*FSHQNL Trigger: CAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGAT...GCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGCTCCTCATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTG | + |
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Preference number: 5 (lower is better) Translates to: EKFLIGGSYWEAARAVLLIWALA*FSHQNL Trigger: CAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGAT...GAGGAGCACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| CDS-3UTR CAA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAATCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: GCKAKCDTCCELEATWLKSFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...TTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | CTGCACTGGTGTTGGAACTGTGGTCAAAGTTGGCGCCAACTCTATCTGGAGGGATCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LHWCWNCGQSWRQLYLEGSFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...TCCCTCCAGATAGAGTTGGCGCCAACTTTGACCACAGTTCCAACACCAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214494.2 |
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| CDS CCA 90 bp | TCTCTTTCATCTGGGCATTGGCCTTGTTCTCCCACCAGAATTTGTTaGTGGCTTTCTTGTGCTCTGGGCTGGCCAGATGTTCCAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SLSSGHWPCSPTRIC*WLSCALGWPDVPAD Trigger: GTCTGCTGGAACATCTGGCCAGCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAATGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GCKAKCDTCCELEATWLKCSTVR*PWLRCF Trigger: AAAACACCTGAGCCATGGCAACCTGACAGTGCTACA...TTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KCDTCCELEATWLKDRGASHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...GGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GCAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATGCKAKCDTCCELEATWSHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...CCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAGACAGGGGAGCCTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KCDTCCELEATWLKDRGAFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...GGCTCCCCTGTCTTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | CAACAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQVARPSVIPAVSWRLHGFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...GCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | GGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCTGAAAATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCKAKCDTCCELEATWLKIWALA*FSHQNL Trigger: CAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGAT...TTTCAGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214748.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAGCTGTGCTCCTCCTCTaGGATCATCCAGGGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEAVLLL*DHPGRC Trigger: ACACCTCCCTGGATGATCCAAGAGGAGGAGCACAGC...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AGGTCCTTGAGCACTGAGGATGGTAAAGATCAGATTGGCTCCCATTTCCCAGCATGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSTEDGKDQIGSHFPACSTVR*PWLRCF Trigger: AAAACACCTGAGCCATGGCAACCTGACAGTGCTACA...TGCTGGGAAATGGGAGCCAATCTGATCTTTACCATCCTCAGTGCTCAAGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213813.2 ENSMUST00000217351.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAGAAATTCCTCATAGGAGGGTCCTATTGGGAGGCTGCCAGAGCTGTGTGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFEKFLIGGSYWEAARAVCSTVR*PWLRCF Trigger: AAAACACCTGAGCCATGGCAACCTGACAGTGCTACA...CACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATGAGGAATTTCTCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214494.2 ENSMUST00000214702.2 |
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| CDS-3UTR CAA 90 bp | GATTTCAGGGCAGGGTGGCTAGTTTCAGATGCCTGTATGGGTAGTGAAGTGTGGTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DFRAGWLVSDACMGSEVWFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...CCACACTTCACTACCCATACAGGCATCTGAAACTAGCCACCCTGCCCTGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| CDS-3UTR CAA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTCATAGGAGGGTCCTATaGGGAGGCTGCCAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPHRRVL*GGCQSC Trigger: ACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTATG...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAATCTTTCATCTGGGCATaGGCCTTGTTCTCCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSWNWFVGHEVRCNCAWESFIWA*ALFSHQ Trigger: CTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGA...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | GCAGCCGGGGAGGATTTGGTCTTAGGAATAATAGCTGGAATTGGTTTGTTGGCCTTTCCCTTTACGTGGTaGCTTGCTTCTTGTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAGEDLVLGIIAGIGLLAFPFTW*LASCCS Trigger: GCTGCAACAAGAAGCAAGCAACCACGTAAAGGGAAA...GGCCAACAAACCAATTCCAGCTATTATTCCTAAGACCAAATCCTCCCCGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAACCACAGAAGAAAGTTaGCCGACACAGAGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: NSWNWFVGHEVRCNCAWETTEES*PTQRTS Trigger: CGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAAATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEIWALA*FSHQNL Trigger: CAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGAT...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTTGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPCSTVR*PWLRCF Trigger: AAAACACCTGAGCCATGGCAACCTGACAGTGCTACA...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | AATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTGGGAATTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSWNWFVGHEVRCNCAWEFSHQN*LVAFLC Trigger: GCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAA...TTCCCAGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTCCTTTACGTGGTTGCTaGCTTCTTGTTGCAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPPLRGC*LLVAAS Trigger: CGAAGCTGCAACAAGAAGCAAGCAACCACGTAAAGG...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | GGAATAATAGCTGGAATTGGTTTGTTGGCCATGAAGTCAGATGCAATTGCGCCTTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GIIAGIGLLAMKSDAIAPSHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...AGGCGCAATTGCATCTGACTTCATGGCCAACAAACCAATTCCAGCTATTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGATATACCAAAAGAGGCTTCAGATCTCATTTTGGATGGTTGTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAVFRYTKRGFRSHFGWLSHQNL*VAFLCS Trigger: AGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGA...CAACCATCCAAAATGAGATCTGAAGCCTCTTTTGGTATATCTGAAGACAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213813.2 |
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| CDS GCA 72 bp | TGGGCGGCGCGGACGGCCCGGCGGGCGGCCTCCACCTaGGGTAGAAGCCGCTCCAGAGCCCCCTTCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: WAARTARRAAST*GRSRSRAPFNC Trigger: GCAGTTGAAGGGGGCTCTGGAGCGGCTTCTACCGCAGGTGGAGGCCGCCCGCCGGGCCGTCCGCGCCGCCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 90 bp | GGGCTGGCCAGATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTTCGCACTTCGCAGCCACAGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLARCSSRPPCSTVR*PWLRCFRTSQPQHG Trigger: CCCGTGCTGTGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATCTGGCCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CCA 72 bp | TCCAGCAGACCCCCGTGTAGCACTGTCAGGTTGCCATaGCTCAGGTGTTTTCGCACTTCGCAGCCACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPPCSTVRLP*LRCFRTSQPQH Trigger: GTGCTGTGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 72 bp | GTGGCTGTAGACGTGACCGCGACCACAGAAGAAAGTTaGCCGACACAGAGGACATCGCTGCGGTGGCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VAVDVTATTEES*PTQRTSLRWRH Trigger: ATGGCGCCACCGCAGCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGTCGCGGTCACGTCTACAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 72 bp | GTGGCTGTAGACGTGACCGCGACCACAGAAGAAAGTTaGCCGACACAGAGGACATCGCTGCGGTGGCGCCAN | + |
|
Preference number: 6 (lower is better) Translates to: VAVDVTATTEES*PTQRTSLRWRX Trigger: NTGGCGCCACCGCAGCGATGTCCTCTGTGTCGGCAAACTTTCTTCTGTGGTCGCGGTCACGTCTACAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214748.2 |
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| CDS GCA 72 bp | GATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTTaGCATGGCTCAGGTGTTTTCGCACTTCGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DVPADPRVALSG*HGSGVFALRSH Trigger: GTGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 72 bp | AGATGTTCCAGCAGACCCCCGTGTAGCACTGTCAGGTaGCCATGGCTCAGGTGTTTTCGCACTTCGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RCSSRPPCSTVR*PWLRCFRTSQP Trigger: TGGCTGCGAAGTGCGAAAACACCTGAGCCATGGCAACCTGACAGTGCTACACGGGGGTCTGCTGGAACATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 90 bp | AAGGCCAAGTGTGATACCTGCTGTGAGCTGGAGGCTACATGGCCGTaGGTCGCTTTCCAACTTTCAGGTGCTGAAGAGCCCTCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KAKCDTCCELEATWP*VAFQLSGAEEPSSG Trigger: TCCAGAAGAGGGCTCTTCAGCACCTGAAAGTTGGAAAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS CCA 72 bp | CAGGTTGCAAGGCCAAGTGTGATACCTGCTGTGAGCTaGAGGCTACATGGCCGTTGGTCGCTTTCCAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: QVARPSVIPAVS*RLHGRWSLSNF Trigger: AAAGTTGGAAAGCGACCAACGGCCATGTAGCCTCCAGCTCACAGCAGGTATCACACTTGGCCTTGCAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS CAA 90 bp | TTCTCTTTCATCTGGGCATTGGCCTTGTTCTCCCACCAGAATTTGTaGGTGGCTTTCTTGTGCTCTGGGCTGGCCAGATGTTCCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSFIWALALFSHQNL*VAFLCSGLARCSSR Trigger: TCTGCTGGAACATCTGGCCAGCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS CAA 90 bp | AACTTCTCTTTCATCTGGGCATTGGCCTTGTTCTCCCACCAGAATTaGTTGGTGGCTTTCTTGTGCTCTGGGCTGGCCAGATGTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NFSFIWALALFSHQN*LVAFLCSGLARCSS Trigger: GCTGGAACATCTGGCCAGCCCAGAGCACAAGAAAGCCACCAACAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS GCA 72 bp | TTCCTGCCGACTCTGTTCTACCTCACGGATCTGAGCTaGCATCTCTTTAATCACCTCGTCCTCCTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLPTLFYLTDLS*HLFNHLVLLFL Trigger: GAGGAAAAGGAGGACGAGGTGATTAAAGAGATGGCAGCTCAGATCCGTGAGGTAGAACAGAGTCGGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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| CDS GCA 72 bp | TCAGCTTTTCCCTTTACGTGGTTGCTTGCTTCTTGTTaGAGCTTCGGTTTTGAATTGATGCCTGGACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SAFPFTWLLASC*SFGFELMPGLP Trigger: TGGCAGTCCAGGCATCAATTCAAAACCGAAGCTGCAACAAGAAGCAAGCAACCACGTAAAGGGAAAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053286.9 |
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| CDS CAA 72 bp | GAGATCAGAAACTTCTCTTTCATCTGGGCATTGGCCTaGTTCTCCCACCAGAATTTGTTGGTGGCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EIRNFSFIWALA*FSHQNLLVAFL Trigger: CAAGAAAGCCACCAACAAATTCTGGTGGGAGAACAAGGCCAATGCCCAGATGAAAGAGAAGTTTCTGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053286.9 ENSMUST00000213813.2 ENSMUST00000214494.2 ENSMUST00000214702.2 ENSMUST00000214748.2 ENSMUST00000216572.2 ENSMUST00000217270.2 ENSMUST00000217351.2 |
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