Pregenerated sensors for CCDC82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079084Ensembl transcript IDs: ENSMUST00000110583.12, ENSMUST00000216578.2, ENSMUST00000217444.4, ENSMUST00000239561.1
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTCAGCTGCTTTaGGTGACCCCTTCATGCCTTCAAAACCAGTACCACCTGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: APSPMASHSAKPQLL*VTPSCLQNQYHLGD Trigger: GTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | CTTCACCAATGGCCTCTCACAGTGCCAAGCCTCAGCTGCTTTGCGTaGCCCCTTCATGCCTTCAAAACCAGTACCACCTGGGTGACCCTT | + |
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Preference number: 1 (lower is better) Translates to: LHQWPLTVPSLSCFA*PLHAFKTSTTWVTL Trigger: AAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTTGGCACTGTGAGAGGCCATTGGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 90 bp | CTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATaGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LEFKQVRKQELMQRP*RDVLYWLASPGLLS Trigger: GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAATTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTaGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELMQRPWRDVLY*LASPGLLSLLSYRT Trigger: GGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | AAAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCACCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KGHGGMFFTGLPHLA*SACSLIEPKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | AAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: KGSQDWNSSRSGSRS*CRGHGGMFFTGLLP Trigger: GGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | GATGCTCTTGGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTaGATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: DALGGHLMVLASPKH*MTPSVLGLQLQLRL Trigger: CAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | AGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RGHGGMFFTGLLPLA*SACSLIEPRLPAQK Trigger: TTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 90 bp | AGGAAACAGGAGCTGATACAAAGGCCATGGAGGGATGTTCTTTACTaGCTTGCCTCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELIQRPWRDVLY*LASPGLLSLLSYRT Trigger: GGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | AAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGGAGCTaGTACAAAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: KGSQDWNSSRSGNRS*YKGHGGMFFTGLPH Trigger: GTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | AAGCAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: KQLGRKGFIRLTLPY*CSSPKEVRTGTQAG Trigger: ACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | AAGCAGATGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATATTaGCAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KQMGRKGFIRLTLPY*QRKSGLEFKQVRKQ Trigger: CTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCATCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | TGTTCAAATGTGTGGGCACATGACTATTTGTGTCTGCGTGCATGCTaGGCTCAGAGGATAGCCTTGGTGTCACTTACAAGCACCACATAT | + |
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Preference number: 1 (lower is better) Translates to: CSNVWAHDYLCLRAC*AQRIALVSLTSTTY Trigger: ATATGTGGTGCTTGTAAGTGACACCAAGGCTATCCTCTGAGCTCAGCATGCACGCAGACACAAATAGTCATGTGCCCACACATTTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | CATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTaGTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCT | + |
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Preference number: 1 (lower is better) Translates to: HQEYNLGHLWNTASL*FQKTLPRRCHLNDA Trigger: AGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 90 bp | GACCCTTACATATTACCAAGTCCTGCTGCATCAGGAGTACAACCTTaGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACT | + |
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Preference number: 1 (lower is better) Translates to: DPYILPSPAASGVQP*PSLEHSLFVLSENT Trigger: AGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGACTTGGTAATATGTAAGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | TCAACTGAAGCTCCTTTCTCTGTGGTAACTCCAGCTGTGTCAAGTTaGCACAAAACTAGCCAGTACAGGGGACTGAACTCAGGTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: STEAPFSVVTPAVSS*HKTSQYRGLNSGLY Trigger: ATAAAGACCTGAGTTCAGTCCCCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTACCACAGAGAAAGGAGCTTCAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 90 bp | AGAGATGGTCCCACCCACAAGGGGCTTTCCCACTTGATCACTAATTaGGAAAATGCCTTACAGTTGGATCTTATGGAGGCATTTCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: RDGPTHKGLSHLITN*ENALQLDLMEAFPQ Trigger: TTGAGGAAATGCCTCCATAAGATCCAACTGTAAGGCATTTTCTCAATTAGTGATCAAGTGGGAAAGCCCCTTGTGGGTGGGACCATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 90 bp | ACTTTAGCAGAAGGAAACATTTCTCAACCTGGAATAGATGAGCTATaGTCTCACTCTGAGGCTAGGATACTGAATGCATGGAGGCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: TLAEGNISQPGIDEL*SHSEARILNAWRPE Trigger: TTCAGGCCTCCATGCATTCAGTATCCTAGCCTCAGAGTGAGACCATAGCTCATCTATTCCAGGTTGAGAAATGTTTCCTTCTGCTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 90 bp | CAGCCTGTTTCTACTAAACTGACAGGACATGATAGCACATTCAACTaGTGGTCACGTGTGAGAAAAGCATCACCACGTGACTATAATACA | + |
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Preference number: 1 (lower is better) Translates to: QPVSTKLTGHDSTFN*WSRVRKASPRDYNT Trigger: TGTATTATAGTCACGTGGTGATGCTTTTCTCACACGTGACCAGCAGTTGAATGTGCTATCATGTCCTGTCAGTTTAGTAGAAACAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGTCAGGAAACAGGAGCTaGTACAAAGGCCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: APPRAWVTSPAMPFVAHASGNRS*YKGHGG Trigger: CCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGA...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGGAGCTGATACAAAGGCTACCAGCCCAGAGATaGTCCCACCCACAAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RKSGLELKQVRKQELIQRLPAQR*SHPQGA Trigger: AGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAG...CCTTTGTATCAGCTCCTGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CAA 90 bp | CAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QRPWRDVLYWLASPG*LSLLSYRTKTTSPE Trigger: TTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGACACTGAGGGACTTCTaGACCACAAAGCTAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: APPRAWVTSPAMPFVAHATLRDF*TTKLMF Trigger: GAACATTAGCTTTGTGGTTCAGAAGTCCCTCAGTGT...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGCATATTACCAAGTCCTaGTGCATCAGGAGTACAACC | + |
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Preference number: 2 (lower is better) Translates to: APPRAWVTSPAMPFVAHAHITKS*CIRSTT Trigger: GGTTGTACTCCTGATGCAGCAGGACTTGGTAATATG...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCAGGAAACAGGAGCTaGTACAAAGGCCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LACSACSLIEPRLPAQKWSGNRS*YKGHGG Trigger: CCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGA...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGAAGCCTCAGCTGCTTTaGGTGACCCCTTCATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LACSACSLIEPRLPAQKWKPQLL*VTPSCL Trigger: AAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTT...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAACCTTGGCCATCTCTaGAACACAGCCTCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SIATEAAPSPMASHSAKPNLGHL*NTASLC Trigger: GCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAAAGTACTATATTGACTaGGCCATCCTCAGGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRKYYID*AILRSA Trigger: GGCTGACCTGAGGATGGCTCAGTCAATATAGTACTT...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATGTACTCCACTGCTGCTaGTGCTCTTGGTGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SLPPSVGITSTFHHAWLYVLHCC*CSWWSS Trigger: AGATGACCACCAAGAGCATCAGCAGCAGTGGAGTAC...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTAGGGATGTTCTTTACTaGCTTGCCTCACCTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SCCIRSTTLAISGTQPLCRDVLY*LASPGL Trigger: CAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCT...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGAACCTTGGCCATCTCTaGAACACAGCCTCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRNLGHL*NTASLC Trigger: GCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTT...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAGACAAGTACTATATTaGCTGAGCCATCCTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SIATEAAPSPMASHSAKPRQVLY*LSHPQV Trigger: GACCTGAGGATGGCTCAGTCAATATAGTACTTGTCT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTGCTCCTCCAAGGGCTTaGGTCACTTCTCCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGAPPRA*VTSPAM Trigger: CATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTACACTGAGGGACTTCTaGACCACAAAGCTAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SCCIRSTTLAISGTQPLCTLRDF*TTKLMF Trigger: GAACATTAGCTTTGTGGTTCAGAAGTCCCTCAGTGT...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGTCACAGGAATACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTGCCAGTACAGGGGACTaGACTCAGGTCTTTATGTTC | + |
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Preference number: 2 (lower is better) Translates to: RLSQEYPTLLVPICLSQGASTGD*TQVFMF Trigger: GAACATAAAGACCTGAGTTCAGTCCCCTGTACTGGC...ACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAAGGGGCTTTCCCACTTaGTCACTAATTGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRRGFPT*SLIEKM Trigger: CATTTTCTCAATTAGTGATCAAGTGGGAAAGCCCCT...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAGGGGCTTTCCCACTTaGTCACTAATTGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SIATEAAPSPMASHSAKPRGFPT*SLIEKM Trigger: CATTTTCTCAATTAGTGATCAAGTGGGAAAGCCCCT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTTCAGGAAACAGGAGCTaGTACAAAGGCCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPSGNRS*YKGHGG Trigger: CCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGA...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCAAAGATGTCACCTCAATaGTGCTGGTCTCTTCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: LHDPFSPGPSIATEAAPSKMSPQ*CWSLLN Trigger: ATTAAGAAGAGACCAGCATCATTGAGGTGACATCTT...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR GCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTAAGCCTCAGCTGCTTTaGGTGACCCCTTCATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ILTKEVRTGIQAGQEAGAKPQLL*VTPSCL Trigger: AAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTT...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCTGATACAAAGGCCATaGAGGGATGTTCTTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRLIQRP*RDVLYW Trigger: CCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAATACCCCACTCTGCTaGTACCAATTTGTCTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SIATEAAPSPMASHSAKPNTPLC*YQFVLV Trigger: GACTAAGACAAATTGGTACCAGCAGAGTGGGGTATT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTCTGCACCTTCACCAATaGCCTCTCACAGTGCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGLHLHQ*PLTVPS Trigger: GCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAG...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTTCCCAGAAAGTACTATATTGACTaGGCCATCCTCAGGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGHLWNTASLCFQKTLPRKYYID*AILRSA Trigger: GGCTGACCTGAGGATGGCTCAGTCAATATAGTACTT...TCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTGCCAGTACAGGGGACTaGACTCAGGTCTTTATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ILTKEVRTGIQAGQEAGAASTGD*TQVFMF Trigger: GAACATAAAGACCTGAGTTCAGTCCCCTGTACTGGC...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCACACTTGATCACTAATTaGGAAAATGCCTTACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LHDPFSPGPSIATEAAPSHLITN*ENALQL Trigger: CAACTGTAAGGCATTTTCTCAATTAGTGATCAAGTG...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR GCA 90 bp | ACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAATGTTCTTTACTGGCTTaGCTCACCTGGCTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TPLCWYQFVLVRVSIPAQCSLLA*LTWLAQ Trigger: CTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACA...TTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTAGGGATGTTCTTTACTaGCTTGCCTCACCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPRDVLY*LASPGL Trigger: CAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCT...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGAATACCCCACTCTGCTaGTACCAATTTGTCTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRNTPLC*YQFVLV Trigger: GACTAAGACAAATTGGTACCAGCAGAGTGGGGTATT...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTAGGGATGTTCTTTACTaGCTTGCTTCCCCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILTKEVRTGIQAGQEAGARDVLY*LASPGL Trigger: CAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCT...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 90 bp | GAAGCAGATGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATATaGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EADGEERVYSAYTSI*TKEVRTGIQAGQEA Trigger: TGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCATCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGAAGATGTCACCTCAATaGTGCTGGTCTCTTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LACSACSLIEPRLPAQKWKMSPQ*CWSLLN Trigger: ATTAAGAAGAGACCAGCATCATTGAGGTGACATCTT...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATGACCCCTTGTCAACTTaGCACACAAAAACATCACTA | + |
|
Preference number: 2 (lower is better) Translates to: SLPPSVGITSTFHHAWLYDPLST*HTKTSL Trigger: TAGTGATGTTTTTGTGTGTCAAGTTGACAAGGGGTC...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTTGTTCTTTACTGGCTTaGCTCACCTGGCTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSCSLLA*LTWLAQ Trigger: CTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACA...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTAGGGATGTTCTTTACTaGCTTGCCTCACCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSRDVLY*LASPGL Trigger: CAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCT...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTAACCTTGGCCATCTCTaGAACACAGCCTCTTTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGNLGHL*NTASLC Trigger: GCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTT...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 90 bp | AGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SQGFYSCTNIMTKKQ*GRKGFIRLTLPYCC Trigger: ACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTACACTGAGGGACTTCTaGACCACAAAGCTAATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPTLRDF*TTKLMF Trigger: GAACATTAGCTTTGTGGTTCAGAAGTCCCTCAGTGT...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAGCCAGTACAGGGGACTaGACTCAGGTCTTTATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSASTGD*TQVFMF Trigger: GAACATAAAGACCTGAGTTCAGTCCCCTGTACTGGC...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATAAGATGTCACCTCAATaGTGCTGGTCTCTTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLPPSVGITSTFHHAWLYKMSPQ*CWSLLN Trigger: ATTAAGAAGAGACCAGCATCATTGAGGTGACATCTT...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGTTCTTTACTGGCTTaGCTCACCTGGCTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSCSLLA*LTWLAQ Trigger: CTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACA...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGAAAATGCCTTACAGTTaGATCTCATGGAGACATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LACSACSLIEPRLPAQKWKMPYS*ISWRHF Trigger: GAAATGTCTCCATGAGATCCAACTGTAAGGCATTTT...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTAGACAAGTACTATATTaGCTGAGCCATCCTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSRQVLY*LSHPQV Trigger: GACCTGAGGATGGCTCAGTCAATATAGTACTTGTCT...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | ACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAAGGGGCTTTCCCACTTaGTCACTAATTGAGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: TPLCWYQFVLVRVSIPAQRGFPT*SLIEKM Trigger: CATTTTCTCAATTAGTGATCAAGTGGGAAAGCCCCT...TTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATGTAATGCAAAGTTTTTaGTTTGGTAGTTCTGGTATC | + |
|
Preference number: 2 (lower is better) Translates to: SLPPSVGITSTFHHAWLYVMQSF*FGSSGI Trigger: GATACCAGAACTACCAAAGCAAAAACTTTGCATTAC...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTAATACCCCACTCTGCTaGTACCAATTTGTCTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSNTPLC*YQFVLV Trigger: GACTAAGACAAATTGGTACCAGCAGAGTGGGGTATT...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR TCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTCACTTGATCACTAATTaGGAAAATGCCTTACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILTKEVRTGIQAGQEAGAHLITN*ENALQL Trigger: CAACTGTAAGGCATTTTCTCAATTAGTGATCAAGTG...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR CCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTAAAATGCCTTACAGTTaGATCTCATGGAGACATTTC | + |
|
Preference number: 2 (lower is better) Translates to: ILTKEVRTGIQAGQEAGAKMPYS*ISWRHF Trigger: GAAATGTCTCCATGAGATCCAACTGTAAGGCATTTT...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR-3UTR TCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTCACTTGATCACTAATTaGGAAAATGCCTTACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGHLITN*ENALQL Trigger: CAACTGTAAGGCATTTTCTCAATTAGTGATCAAGTG...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 72 bp | AACCGTCCACTGTCTGGGATCCAACTCACGATCTTCTaGGCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NRPLSGIQLTIF*APPRAWVTSPA Trigger: GGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACAGTGGACGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 72 bp | AGACAGGGTCTCTCACTGATGAGTAGGCTGGGTGCCTaGCCAACACCCTCAGGGATCTGCCTCATCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RQGLSLMSRLGA*PTPSGICLIFA Trigger: GGCAAAGATGAGGCAGATCCCTGAGGGTGTTGGCCAGGCACCCAGCCTACTCATCAGTGAGAGACCCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 72 bp | TGGCCTCTCACAGTGCCAAGCCTCAGCTGCTTTGCGTaGCCCCTTCATGCCTTCAAAACCAGTACCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WPLTVPSLSCFA*PLHAFKTSTTW Trigger: CCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTTGGCACTGTGAGAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR CCA 72 bp | AAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATaGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQVRKQELMQRP*RDVLYWLASPG Trigger: GCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 72 bp | CCAATGGCCTCTCACAGTGCCAAGCCTCAGCTGCTTTaGGTGACCCCTTCATGCCTTCAAAACCAGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PMASHSAKPQLL*VTPSCLQNQYH Trigger: GTGGTACTGGTTTTGAAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTTGGCACTGTGAGAGGCCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR GCA 72 bp | TGCCTGGCCAACACCCTCAGGGATCTGCCTCATCTTTaGCTCCCAGCGTGGGGATTACAAGTACATTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CLANTLRDLPHL*LPAWGLQVHSI Trigger: GATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGATGAGGCAGATCCCTGAGGGTGTTGGCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| 3UTR TCA 72 bp | TCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTaGTGCTCTTGGTGGTCATCTCATGGTACTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSRLQMPVLHCC*CSWWSSHGTGI Trigger: GATGCCAGTACCATGAGATGACCACCAAGAGCATCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | CAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGGATGTTCTTTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDWNSSRSGSRS*CRGHGGMFFTG Trigger: GCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | GAGCTGATACAAAGGCCATGGAGGGATGTTCTTTACTaGCTTGCCTCACCTGGCTTGCTCAGCCTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELIQRPWRDVLY*LASPGLLSLLS Trigger: AGAGAGCAGGCTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | ATCCAACTCACGATCTTCTGGGCTCCTCCAAGGGCTTaGGTCACTTCTCCAGCCATGCCCTTTGTAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: IQLTIFWAPPRA*VTSPAMPFVAH Trigger: ATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTGAGTTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | AAGCAGGTCAGGAAACAGGAGCTGATACAAAGGCCATaGAGGGATGTTCTTTACTGGCTTGCCTCACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQVRKQELIQRP*RDVLYWLASPG Trigger: GCCAGGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGACCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATGTCCTGGGCCTTCAATaGCAACTGAGGCTGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPPSVGITSTFHHAWLYVLGLQ*QLRLHL Trigger: AAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGAC...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCTGCTGCTGATGCTCTaGGTGGTCATCTCATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRLLLML*VVISWY Trigger: GTACCATGAGATGACCACCAAGAGCATCAGCAGCAG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTCAAAACATGGTCAGGTaGTCACAGGAATACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SIATEAAPSPMASHSAKPQNMVR*SQEYPT Trigger: AGTGGGGTATTCCTGTGACAACCTGACCATGTTTTG...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | CAGGACTGGAACTCAAGCAGGTCAGGAAACAGGAGCTaGTACAAAGGCCATGGAGGGATGTTCTTTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDWNSSRSGNRS*YKGHGGMFFTG Trigger: GCCAGTAAAGAACATCCCTCCATGGCCTTTGTATCAGCTCCTGTTTCCTGACCTGCTTGAGTTCCAGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | GACCCCTTCATGCCTTCAAAACCAGTACCACCTGGGTaGCCCTTACATATTACCAAGTCCTGCTGCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DPFMPSKPVPPG*PLHITKSCCIR Trigger: CCTGATGCAGCAGGACTTGGTAATATGTAAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | GGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTaGATGACCCCTTCAGTCCTGGGCCTTCAATTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGHLMVLASPKH*MTPSVLGLQLQ Trigger: TTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | GGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCAAGACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GGMFFTGLLPLA*SACSLIEPRLP Trigger: TGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCAAAACATGGTCAGGTaGTCACAGGAATACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRQNMVR*SQEYPT Trigger: AGTGGGGTATTCCTGTGACAACCTGACCATGTTTTG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | TTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCCTaGTCTCTTATAGAACCAAGACTACCAGCCCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FFTGLLPLACSA*SLIEPRLPAQK Trigger: TTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | GGTTTGGGGGACTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGCAGATGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLGDCLSQGFYS*TNIMTKKQMGR Trigger: CCTCCCCATCTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGTCCCCCAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | TCAAAAGCAAAAGTCAATCTCCAACCGTCCACTGTCTaGGATCCAACTCACGATCTTCTGGGCTCCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKAKVNLQPSTV*DPTHDLLGSSK Trigger: CTTGGAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACAGTGGACGGTTGGAGATTGACTTTTGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAAAGACAAGTACTATATaGACTGAGCCATCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRKTSTI*TEPSSG Trigger: ACCTGAGGATGGCTCAGTCAATATAGTACTTGTCTT...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAAGACAAGTACTATATaGACTGAGCCATCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SIATEAAPSPMASHSAKPKTSTI*TEPSSG Trigger: ACCTGAGGATGGCTCAGTCAATATAGTACTTGTCTT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCAGGTAGTTCTGGTATCTaGTTAATCACAGCTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHDPFSPGPSIATEAAPSGSSGI*LITADS Trigger: AGAATCAGCTGTGATTAACAAGATACCAGAACTACC...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTGTCCTGGGCCTTCAATaGCAACTGAGGCTGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGVLGLQ*QLRLHL Trigger: AAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGAC...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | AAGGTTCAGGTGTGGTTGTTCAAATGTGTGGGCACATaGCTATTTGTGTCTGCGTGCATGCTGAGCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KVQVWLFKCVGT*LFVSACMLSSE Trigger: CTCTGAGCTCAGCATGCACGCAGACACAAATAGTCATGTGCCCACACATTTGAACAACCACACCTGAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | GTCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTaGAACACAGCCTCTTTGTGCTTTCAGAAAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLHQEYNLGHL*NTASLCFQKTL Trigger: AAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGFIRLTLPY*CSSPKEVRTGT Trigger: AGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | TACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTaGTTTCAGAAAACACTTCCCAGAAGATGTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: YNLGHLWNTASL*FQKTLPRRCHL Trigger: GAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | ATATTACCAAGTCCTGCTGCATCAGGAGTACAACCTTaGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ILPSPAASGVQP*PSLEHSLFVLS Trigger: TGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGACTTGGTAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATGAAAATGCCTTACAGTaGGATCTTATGGAGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPPSVGITSTFHHAWLYENALQ*DLMEAF Trigger: AAATGCCTCCATAAGATCCAACTGTAAGGCATTTTC...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTCAAAACATGGTCAGGTaGTCACAGGAATACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSQNMVR*SQEYPT Trigger: AGTGGGGTATTCCTGTGACAACCTGACCATGTTTTG...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | GGGAGGAAAGGGTTTATTCGGCTTACACTTCCATATTaGCAAAGGAAGTCAGGACTGGAATTCAAGCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GRKGFIRLTLPY*QRKSGLEFKQV Trigger: GACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | TCTACTAAACTGACAGGACATGATAGCACATTCAACTaGTGGTCACGTGTGAGAAAAGCATCACCACGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: STKLTGHDSTFN*WSRVRKASPRD Trigger: GTCACGTGGTGATGCTTTTCTCACACGTGACCAGCAGTTGAATGTGCTATCATGTCCTGTCAGTTTAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR GCA 72 bp | CTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGCAGTTGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVPICLSQGFYS*TNIMTKKQLGR Trigger: CCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTAAGACAAGTACTATATaGACTGAGCCATCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPKTSTI*TEPSSG Trigger: ACCTGAGGATGGCTCAGTCAATATAGTACTTGTCTT...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTTCCCAGAGAAAATGCCTTACAGTaGGATCTTATGGAGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LGHLWNTASLCFQKTLPRENALQ*DLMEAF Trigger: AAATGCCTCCATAAGATCCAACTGTAAGGCATTTTC...TCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR TCA 72 bp | GTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAGATGGGGAGGAAAGGGTTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: VLVRVSIPAQTS*PRSRWGGKGLF Trigger: GAATAAACCCTTTCCTCCCCATCTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CCA 72 bp | ACTAAACTGACAGGACATGATAGCACATTCAACTGCTaGTCACGTGTGAGAAAAGCATCACCACGTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: TKLTGHDSTFNC*SRVRKASPRDY Trigger: ATAGTCACGTGGTGATGCTTTTCTCACACGTGACCAGCAGTTGAATGTGCTATCATGTCCTGTCAGTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTGGTAGTTCTGGTATCTaGTTAATCACAGCTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSGSSGI*LITADS Trigger: AGAATCAGCTGTGATTAACAAGATACCAGAACTACC...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTTGCAAAGTTTTTGCTTaGGTAGTTCTGGTATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSCKVFA*VVLVSC Trigger: ACAAGATACCAGAACTACCAAAGCAAAAACTTTGCA...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGCATCCTCCTCACCAGTaGCTGAACAAGAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APPRAWVTSPAMPFVAHAHPPHQ*LNKSPF Trigger: AAAAGGACTCTTGTTCAGGCACTGGTGAGGAGGATG...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| 3UTR CAA 72 bp | ACCAATGGCCTCTCACAGTGCCAAGCCTCAGCTGCTTaGCGTGACCCCTTCATGCCTTCAAAACCAGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TNGLSQCQASAA*RDPFMPSKPVP Trigger: TGGTACTGGTTTTGAAGGCATGAAGGGGTCACGCAAAGCAGCTGAGGCTTGGCACTGTGAGAGGCCATTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | GCTCCAGATGCCTGTACTCCACTGCTGCTGATGCTCTaGGTGGTCATCTCATGGTACTGGCATCTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: APDACTPLLLML*VVISWYWHLQN Trigger: GTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCATCAGCAGCAGTGGAGTACAGGCATCTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAAATTTCTACCACTATTaGGCCTCCGTCTCTGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRNFYHY*ASVSGV Trigger: CACGCCAGAGACGGAGGCGCAATAGTGGTAGAAATT...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGAGGATTTCTTCCTGGTaGCAGCATACAAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: APPRAWVTSPAMPFVAHARISSW*QHTKFP Trigger: TGGAAACTTTGTATGCTGGCACCAGGAAGAAATCCT...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCTCGACCACCCTGCGTaGGTGTTTAGCACTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCLDHPA*VFSTCF Trigger: AAAGCAAGTGCTAAACACCCACGCAGGGTGGTCGAG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCTCCTCACCAGTGCCTaGACAAGAGTCCTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCLLTSA*TRVLFR Trigger: TCTGAAAAGGACTCTTGTTCAGGCACTGGTGAGGAG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR CCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTAGCTCCTGTAGCTTCTaGTGGTATTCTCGCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SIATEAAPSPMASHSAKPSSCSF*WYSRFR Trigger: TCGAAAGCGAGAATACCACCAGAAGCTACAGGAGCT...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| 3UTR CAA 72 bp | TGGAGGGATGTTCTTTACTGGCTTGCCTCACCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCCAAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLASPG*LSLLSYRTQDY Trigger: GTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAGGCAAGCCAGTAAAGAACATCCCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | TGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCAAGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLASPG*LSLLSYRTKTT Trigger: GGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACATGCGTTCTCAGGAGTTTCTTaGTCCATTTCCAATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: APPRAWVTSPAMPFVAHAFSGVS*SISNEE Trigger: TTCTTCATTGGAAATGGAGCAAGAAACTCCTGAGAA...CGCATGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCATCCTCCTCACCAGTaGCTGAACAAGAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCHPPHQ*LNKSPF Trigger: AAAAGGACTCTTGTTCAGGCACTGGTGAGGAGGATG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR CCA 90 bp | AGGTTGTCACAGGAATACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTCTCGACCACCCTGCGTaGGTGTTTAGCACTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSQEYPTLLVPICLSQGLDHPA*VFSTCF Trigger: AAAGCAAGTGCTAAACACCCACGCAGGGTGGTCGAG...ACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR TCA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGATTGCTCCATTTCCAATaGAGAACATTCATCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRLLHFQ*RTFILD Trigger: GTCGAGGATGAATGTTCTTCATTGGAAATGGAGCAA...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR TCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTGCTTGTCATGTGACATaGAATCATCTGTTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SIATEAAPSPMASHSAKPACHVT*NHLFPS Trigger: CGATGGAAACAGATGATTTCATGTCACATGACAAGC...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | TCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTCTCACAGTGCCAAGCCTCACCTGCTTGTCATGTaGCATGAAATCATCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIATEAAPSPMASHSAKPHLLVM*HEIICF Trigger: GAAACAGATGATTTCATGTCACATGACAAGCAGGTG...AGGCTTGGCACTGTGAGAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATAGCTCCTGTAGCTTCTaGTGGTATTCTCGCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSVGITSTFHHAWLYSSCSF*WYSRFR Trigger: TCGAAAGCGAGAATACCACCAGAAGCTACAGGAGCT...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| 3UTR CAA 72 bp | CATATTACCAAGTCCTGCTGCATCAGGAGTACAACCTaGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HITKSCCIRSTT*AISGTQPLCAF Trigger: GAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGACTTGGTAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCAATTCATCAAAAGCATTaGTCAGAAGAGCCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LHDPFSPGPSIATEAAPSIHQKH*SEEPSQ Trigger: TTGTGAAGGCTCTTCTGATCAATGCTTTTGATGAAT...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCTCTCTAGACGGGGTTaGATAAAGCGATTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRLSRRG*IKRLSK Trigger: TTTGGATAATCGCTTTATTCAACCCCGTCTAGAGAG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGCTCTCTAGACGGGGTTaGATAAAGCGATTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LACSACSLIEPRLPAQKWLSRRG*IKRLSK Trigger: TTTGGATAATCGCTTTATTCAACCCCGTCTAGAGAG...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTGTCATGTGACATaGAATCATCTGTTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCACHVT*NHLFPS Trigger: CGATGGAAACAGATGATTTCATGTCACATGACAAGC...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCACCTGCTTGTCATGTaGCATGAAATCATCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRHLLVM*HEIICF Trigger: GAAACAGATGATTTCATGTCACATGACAAGCAGGTG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTAATTTCTACCACTATTaGGCCTCCGTCTCTGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTKEVRTGIQAGQEAGANFYHY*ASVSGV Trigger: CACGCCAGAGACGGAGGCGCAATAGTGGTAGAAATT...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTAATTTACAGTGGCGATaGAGCCCACAAGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPNLQWR*SPQAWH Trigger: ATGCCAGGCTTGTGGGCTGCATCGCCACTGTAAATT...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | AGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGGAGCTGATACAAAGGTTGCTCCATTTCCAATaGAGAACATTCATCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSGLELKQVRKQELIQRLLHFQ*RTFILD Trigger: GTCGAGGATGAATGTTCTTCATTGGAAATGGAGCAA...CCTTTGTATCAGCTCCTGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR TCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATCACCTGCTTGTCATGTaGCATGAAATCATCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSVGITSTFHHAWLYHLLVM*HEIICF Trigger: GAAACAGATGATTTCATGTCACATGACAAGCAGGTG...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCCAGCCTCTTTCTTTTaGATGATTGAAGACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCPASFF*MIEDSL Trigger: AAGAGAGTCTTCAATCATTCAAAAGAAAGAGGCTGG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTTTCTCCTTGTTGATTaGTATTCTCGTCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LACSACSLIEPRLPAQKWFLLVD*YSRHRL Trigger: AAGGCGATGACGAGAATAGCAATCAACAAGGAGAAA...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATAGGATTTCTTCCTGGTaGCAGCATACAAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSVGITSTFHHAWLYRISSW*QHTKFP Trigger: TGGAAACTTTGTATGCTGGCACCAGGAAGAAATCCT...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTAATTTACAGTGGCGATaGAGCCCACAAGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSNLQWR*SPQAWH Trigger: ATGCCAGGCTTGTGGGCTGCATCGCCACTGTAAATT...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCCAACAGTAAACACCTaGTTGTCATGTGACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCPTVNT*LSCDMK Trigger: TTTCATGTCACATGACAAGCAGGTGTTTACTGTTGG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | GAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTaGTGCTTTCAGAAAACACTTCCCAGAAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYNLGHLWNTAS*CFQKTLPRRCH Trigger: GTGACATCTTCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGCTTCTTTTAGTCCGATaGCAATCAACTCGAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRLLLVR*QSTRDF Trigger: AAAATCTCGAGTTGATTGGCATCGGACTAAAAGAAG...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTGTTGTGATGATTCTCTaGTTGACCAGGGTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSVVMIL*LTRVSF Trigger: GAAGCTCACCCTGGTCAAGCAGAGAATCATCACAAC...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTTTCTCAGGAGTTTCTTaGTCCATTTCCAATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCCIRSTTLAISGTQPLCFSGVS*SISNEE Trigger: TTCTTCATTGGAAATGGAGCAAGAAACTCCTGAGAA...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAAATTTACAGTGGCGATaGAGCCCACAAGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSNLQWR*SPQAWH Trigger: ATGCCAGGCTTGTGGGCTGCATCGCCACTGTAAATT...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATATaGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEERVYSAYTSI*TKEVRTGIQAG Trigger: ACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | TTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSCTNIMTKKQ*GRKGFIRLTLP Trigger: TGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | GCTTTCAGAAAACACTTCCCAGAAGATGTCACCTCAATGATGCTGGTCTCTTCTCTCTCTAGACGGGGTTaGATAAAGCGATTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AFRKHFPEDVTSMMLVSSLSRRG*IKRLSK Trigger: TTTGGATAATCGCTTTATTCAACCCCGTCTAGAGAG...AGAAGAGACCAGCATCATTGAGGTGACATCTTCTGGGAAGTGTTTTCTGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | ACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAATTTCTCCTTGTTGATTaGTATTCTCGTCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPLCWYQFVLVRVSIPAQFLLVD*YSRHRL Trigger: AAGGCGATGACGAGAATAGCAATCAACAAGGAGAAA...TTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTTTTCTCCTTGTTGATTaGTATTCTCGTCATCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPFLLVD*YSRHRL Trigger: AAGGCGATGACGAGAATAGCAATCAACAAGGAGAAA...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTATTCATCAAAAGCATTaGTCAGAAGAGCCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPIHQKH*SEEPSQ Trigger: TTGTGAAGGCTCTTCTGATCAATGCTTTTGATGAAT...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAGCTTGTCATGTGACATaGAATCATCTGTTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSACHVT*NHLFPS Trigger: CGATGGAAACAGATGATTTCATGTCACATGACAAGC...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTCCAGCCTCTTTCTTTTaGATGATTGAAGACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGPASFF*MIEDSL Trigger: AAGAGAGTCTTCAATCATTCAAAAGAAAGAGGCTGG...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CTTAACAACGGATGGATCTTCAAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCTTCTTTTAGTCCGATaGCAATCAACTCGAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNNGWIFKPKVPKSFHSPLLLVR*QSTRDF Trigger: AAAATCTCGAGTTGATTGGCATCGGACTAAAAGAAG...AGGACTGTGGAAGGACTTTGGAACTTTGGGCTTGAAGATCCATCCGTTGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAAGGATTTCTTCCTGGTaGCAGCATACAAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSRISSW*QHTKFP Trigger: TGGAAACTTTGTATGCTGGCACCAGGAAGAAATCCT...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTCCAACAGTAAACACCTaGTTGTCATGTGACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGPTVNT*LSCDMK Trigger: TTTCATGTCACATGACAAGCAGGTGTTTACTGTTGG...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCACCAGCCTCTTTCTTTTaGATGATTGAAGACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSPASFF*MIEDSL Trigger: AAGAGAGTCTTCAATCATTCAAAAGAAAGAGGCTGG...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCACCAACAGTAAACACCTaGTTGTCATGTGACATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCWYQFVLVRVSIPAQTSPTVNT*LSCDMK Trigger: TTTCATGTCACATGACAAGCAGGTGTTTACTGTTGG...TGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | AACTCAGGTCTTTATGTTCGTAAGACAAGTACTATATaGACTGAGCCATCCTCAGGTCAGCCCAAATATATC | + |
|
Preference number: 4 (lower is better) Translates to: NSGLYVRKTSTI*TEPSSGQPKYI Trigger: GATATATTTGGGCTGACCTGAGGATGGCTCAGTCAATATAGTACTTGTCTTACGAACATAAAGACCTGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| 3UTR CAA 72 bp | GTAATGCAAAGTTTTTGCTTTGGTAGTTCTGGTATCTaGTTAATCACAGCTGATTCTTCAGCCCCAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VMQSFCFGSSGI*LITADSSAPAN Trigger: GTTAGCTGGGGCTGAAGAATCAGCTGTGATTAACAAGATACCAGAACTACCAAAGCAAAAACTTTGCATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGGAGCTGATACAAAGGGTGATGATTCTCTGCTaGACCAGGGTGAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RKSGLELKQVRKQELIQRVMILC*TRVSFI Trigger: GATGAAGCTCACCCTGGTCAAGCAGAGAATCATCAC...CCTTTGTATCAGCTCCTGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR CAA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCATCCATCGTCCTGATGTaGTATAACTTTCCTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHDPFSPGPSIATEAAPSSIVLM*YNFPER Trigger: TCTCTCAGGAAAGTTATACAACATCAGGACGATGGA...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CAA 90 bp | CTGCATGACCCCTTCAGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCAGGTAAGTCATTATGTTaGGTTTCCTTCAGTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHDPFSPGPSIATEAAPSGKSLC*VSFSCS Trigger: AGAACAACTGAAGGAAACCAAACATAATGACTTACC...TGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACTGAAGGGGTCATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR CAA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTGTGATGATTCTCTGCTaGACCAGGGTGAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ILTKEVRTGIQAGQEAGAVMILC*TRVSFI Trigger: GATGAAGCTCACCCTGGTCAAGCAGAGAATCATCAC...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
||
| CDS-3UTR CAA 90 bp | TCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATTCATCAAAAGCATaGATCAGAAGAGCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPGLLSLLSYRTQDYQPRDSSKA*IRRAFT Trigger: TGTGAAGGCTCTTCTGATCAATGCTTTTGATGAATC...TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCCTCCCAGCGTGGGGATTACAAGTACATTCCATCATGCCTGGCTCTATAACCCGCTCCTTATATaGCTCTTTCCATCGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPPSVGITSTFHHAWLYNPLLI*LFPSTS Trigger: AGAAGTCGATGGAAAGAGCAATATAAGGAGCGGGTT...ATAGAGCCAGGCATGATGGAATGTACTTGTAATCCCCACGCTGGGAGGCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGTCCCACCCACAAGGTCCATCGTCCTGATGTaGTATAACTTTCCTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSYRTKTTSPEMVPPTRSIVLM*YNFPER Trigger: TCTCTCAGGAAAGTTATACAACATCAGGACGATGGA...CCTTGTGGGTGGGACCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS CCA 90 bp | TTTTCAGAGTCCTCAAAATTTCTACCACTATTGCGCCTCCGTCTCTaGCGTGATCTCTCAGAAAGCTCCTGTAGCTTCTGGTGGTATTCT | + |
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Preference number: 5 (lower is better) Translates to: FSESSKFLPLLRLRL*RDLSESSCSFWWYS Trigger: AGAATACCACCAGAAGCTACAGGAGCTTTCTGAGAGATCACGCCAGAGACGGAGGCGCAATAGTGGTAGAAATTTTGAGGACTCTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTTGCTCAGCCTGCTCTCTTATAGAACCAAGACTACCAGCCCAGAAATGGAGTCAGATTTTCTCCTaGTTGATTGCTATTCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: LACSACSLIEPRLPAQKWSQIFS*LIAILV Trigger: GACGAGAATAGCAATCAACAAGGAGAAAATCTGACT...CCATTTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | AGGTTGTCACAGGAATACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTAACCCGCTCCTTATATaGCTCTTTCCATCGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: RLSQEYPTLLVPICLSQGNPLLI*LFPSTS Trigger: AGAAGTCGATGGAAAGAGCAATATAAGGAGCGGGTT...ACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | TCCTGCTGCATCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTCAACTTCTTCTGGTTTaGCAATTAAGCAGCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SCCIRSTTLAISGTQPLCQLLLV*QLSSSL Trigger: AAGACTGCTGCTTAATTGCAAAACCAGAAGAAGTTG...ACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGATGCAGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS GCA 90 bp | TCATCTGTTTCCATCGTCCTGATGTTGTATAACTTTCCTGAGAGATaGACTGAAAATTTACAGTGGCGATGCAGCCCACAAGCCTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SSVSIVLMLYNFPER*TENLQWRCSPQAWH Trigger: ATGCCAGGCTTGTGGGCTGCATCGCCACTGTAAATTTTCAGTGCATCTCTCAGGAAAGTTATACAACATCAGGACGATGGAAACAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | CTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTTCCCAGAGATTCATCAAAAGCATaGATCAGAAGAGCCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LGHLWNTASLCFQKTLPRDSSKA*IRRAFT Trigger: TGTGAAGGCTCTTCTGATCAATGCTTTTGATGAATC...TCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | AGGTTGTCACAGGAATACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTGATTCATCAAAAGCATaGATCAGAAGAGCCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: RLSQEYPTLLVPICLSQGDSSKA*IRRAFT Trigger: TGTGAAGGCTCTTCTGATCAATGCTTTTGATGAATC...ACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGTATTCCTGTGACAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTAACCCGCTCCTTATATaGCTCTTTCCATCGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGNPLLI*LFPSTS Trigger: AGAAGTCGATGGAAAGAGCAATATAAGGAGCGGGTT...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | ATATTGACAAAGGAAGTCAGGACTGGAATTCAAGCAGGTCAGGAAGCAGGAGCTTCCATCGTCCTGATGTaGTATAACTTTCCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: ILTKEVRTGIQAGQEAGASIVLM*YNFPER Trigger: TCTCTCAGGAAAGTTATACAACATCAGGACGATGGA...AGCTCCTGCTTCCTGACCTGCTTGAATTCCAGTCCTGACTTCCTTTGTCAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS CCA 90 bp | CTGCTTGACCAGGGTGAGCTTCATCATCTGGTAAGTCATTATGTTTaGTTTCCTTCAGTTGTTCTTCATCTGCTGAACTATTGCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LLDQGELHHLVSHYV*FPSVVLHLLNYCWC Trigger: ACACCAGCAATAGTTCAGCAGATGAAGAACAACTGAAGGAAACCAAACATAATGACTTACCAGATGATGAAGCTCACCCTGGTCAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000216578.2 ENSMUST00000217444.4 |
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| CDS-3UTR CAA 90 bp | CTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTTCCCAGAGGTAAGTCATTATGTTaGGTTTCCTTCAGTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LGHLWNTASLCFQKTLPRGKSLC*VSFSCS Trigger: AGAACAACTGAAGGAAACCAAACATAATGACTTACC...TCTGGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 |
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| CDS-3UTR CAA 90 bp | ACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTGCACAACAACTTCTTCTGGTTTaGCAATTAAGCAGCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: TPLCWYQFVLVRVSIPAQQLLLV*QLSSSL Trigger: AAGACTGCTGCTTAATTGCAAAACCAGAAGAAGTTG...TTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGCAGAGTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS-3UTR CAA 90 bp | CATCATGCCTGGCTCTATTTTAAATATGGTTTGGGGGACTGTCTTAGTCAGGGTCAACTTCTTCTGGTTTaGCAATTAAGCAGCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HHAWLYFKYGLGDCLSQGQLLLV*QLSSSL Trigger: AAGACTGCTGCTTAATTGCAAAACCAGAAGAAGTTG...ACCCTGACTAAGACAGTCCCCCAAACCATATTTAAAATAGAGCCAGGCATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS TCA 90 bp | TGGTGCCAGCATACAAAGTTTCCAGAAAAGATTCATCAAAAGCATTaGTCAGAAGAGCCTTCACAACTCTTTCAAAGTGAGTATAATGGT | + |
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Preference number: 5 (lower is better) Translates to: WCQHTKFPEKIHQKH*SEEPSQLFQSEYNG Trigger: ACCATTATACTCACTTTGAAAGAGTTGTGAAGGCTCTTCTGATCAATGCTTTTGATGAATCTTTTCTGGAAACTTTGTATGCTGGCACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS GCA 72 bp | TCCATCGTCCTGATGTTGTATAACTTTCCTGAGAGATaGACTGAAAATTTACAGTGGCGATGCAGCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: SIVLMLYNFPER*TENLQWRCSPQ Trigger: TTGTGGGCTGCATCGCCACTGTAAATTTTCAGTGCATCTCTCAGGAAAGTTATACAACATCAGGACGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS TCA 72 bp | AATTTCAGTTGTGATGTAGTCAGATTTTCTCCTTGTTaGTTGCTATTCTCGTCATCGCCTTCCTCATTTCGC | + |
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Preference number: 6 (lower is better) Translates to: NFSCDVVRFSPC*LLFSSSPSSFR Trigger: GCGAAATGAGGAAGGCGATGACGAGAATAGCAATCAACAAGGAGAAAATCTGACTACATCACAACTGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS CCA 72 bp | GAGATGTCAACATATCTTTCGCGTAGGATTTCTTCCTaGTGCCAGCATACAAAGTTTCCAGAAAAGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: EMSTYLSRRISS*CQHTKFPEKIH Trigger: ATGAATCTTTTCTGGAAACTTTGTATGCTGGCACCAGGAAGAAATCCTACGCGAAAGATATGTTGACATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS GCA 72 bp | ATGTCAACATATCTTTCGCGTAGGATTTCTTCCTGGTaGCAGCATACAAAGTTTCCAGAAAAGATTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: MSTYLSRRISSW*QHTKFPEKIHQ Trigger: TTGATGAATCTTTTCTGGAAACTTTGTATGCTGGCACCAGGAAGAAATCCTACGCGAAAGATATGTTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000217444.4 ENSMUST00000239561.1 |
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| CDS CAA 90 bp | TTAAGCTCTGTTTCCTTTTCTGGTAGTTCATTAATATCAGACTTCTaGCTAATATCAAGCTCTTCATCACTGTCAATACTTTCCCCACTA | + |
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Preference number: 6 (lower is better) Translates to: LSSVSFSGSSLISDF*LISSSSSLSILSPL Trigger: TAGTGGGGAAAGTATTGACAGTGATGAAGAGCTTGATATTAGCAAGAAGTCTGATATTAATGAACTACCAGAAAAGGAAACAGAGCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000216578.2 ENSMUST00000217444.4 |
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| CDS TCA 72 bp | TTGCTGGTGTTTGTAAGATGTTTACTGTTGCTTCCCTaGCTTTCAACTTTGATTAATTTAAGCTCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLVFVRCLLLLP*LSTLINLSSVS Trigger: GGAAACAGAGCTTAAATTAATCAAAGTTGAAAGTCAGGGAAGCAACAGTAAACATCTTACAAACACCAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000216578.2 ENSMUST00000217444.4 |
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| CDS TCA 72 bp | ATTATGTTTGGTTTCCTTCAGTTGTTCTTCATCTGCTaGACTATTGCTGGTGTTTGTAAGATGTTTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: IMFGFLQLFFIC*TIAGVCKMFTV Trigger: AACAGTAAACATCTTACAAACACCAGCAATAGTTCAGCAGATGAAGAACAACTGAAGGAAACCAAACATAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110583.12 ENSMUST00000216578.2 ENSMUST00000217444.4 |
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