Pregenerated sensors for CCDC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041117Ensembl transcript IDs: ENSMUST00000094805.5
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCACACCACCCTGAACACACAATCTCATCACATAAAAGCAAGATaGTATAGTAGGCCACTGAAAGATGGGCATGGTGGCACATGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SHTTLNTQSHHIKAR*YSRPLKDGHGGTCL Trigger: CAGGCATGTGCCACCATGCCCATCTTTCAGTGGCCTACTATATCATCTTGCTTTTATGTGATGAGATTGTGTGTTCAGGGTGGTGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAGGTGTGGGCGGTGCTaGCTGACCCCTCACCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: HMPVVLAEAAIQICEFKARCGRC*LTPHPC Trigger: GCAGGGGTGAGGGGTCAGGCAGCACCGCCCACACCT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGAGGCCAATTATATATaGAGCACCAGGCCATCGGGG | + |
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Preference number: 2 (lower is better) Translates to: HMPVVLAEAAIQICEFKAEANYI*STRPSG Trigger: CCCCGATGGCCTGGTGCTCCATATATAATTGGCCTC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATAGTTCAAGGCCAGCCTaGTCTACACTGCGAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSSRPA*STLRVP Trigger: TGGAACTCGCAGTGTAGACCAGGCTGGCCTTGAACT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGGAAAGGTTAGAGAATaGGGGTGGAAAGGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYGKVRE*GWKGEE Trigger: TTCCTCCCCTTTCCACCCTCATTCTCTAACCTTTCC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR CCA 72 bp | AGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAGCCTaGTCTACACTGCGAGTTCCAGGCCAGCTGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: RQPSRSVSSRPA*STLRVPGQLGL Trigger: TAGCCCCAGCTGGCCTGGAACTCGCAGTGTAGACCAGGCTGGCCTTGAACTCACAGATCTGGATGGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR TCA 72 bp | GCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTaGGTTCAAGGCCAGCCTGGTCTACACTGCGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ACSPSRGSHPDL*VQGQPGLHCEF Trigger: GAACTCGCAGTGTAGACCAGGCTGGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR CCA 72 bp | GTAGACGACTACTGTGAGTTTGAGGCCAATTATATATaGAGCACCAGGCCATCGGGGCTGCATAGCAAGACT | + |
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Preference number: 3 (lower is better) Translates to: VDDYCEFEANYI*STRPSGLHSKT Trigger: AGTCTTGCTATGCAGCCCCGATGGCCTGGTGCTCCATATATAATTGGCCTCAAACTCACAGTAGTCGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR-3UTR CAA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCACGACTACTGTGAGTTaGAGGCCAATTATATATGGA | + |
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Preference number: 3 (lower is better) Translates to: HMPVVLAEAAIQICEFKATTTVS*RPIIYG Trigger: TCCATATATAATTGGCCTCAAACTCACAGTAGTCGT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| 3UTR TCA 72 bp | ACCCTGAACACACAATCTCATCACATAAAAGCAAGATaGTATAGTAGGCCACTGAAAGATGGGCATGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: TLNTQSHHIKAR*YSRPLKDGHGG Trigger: GCCACCATGCCCATCTTTCAGTGGCCTACTATATCATCTTGCTTTTATGTGATGAGATTGTGTGTTCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGTGGAGGAGGCGCGCTaGGCTTCTCCCCACGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAVEEAR*ASPHGG Trigger: TCCGCCGTGGGGAGAAGCCCAGCGCGCCTCCTCCAC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGCCCACCTCGGAGCCTaGTCTGGGTGCCCAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAAHLGA*SGCPAL Trigger: AAGGGCTGGGCACCCAGATCAGGCTCCGAGGTGGGC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGCTGTGGAGGCCTGCTaGGTCTGGCCCACCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAAVEAC*VWPTSE Trigger: CTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCCTCGGAGCCTGATCTaGGTGCCCAGCCCTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAPRSLI*VPSPSP Trigger: GGGTGAAGGGCTGGGCACCCAGATCAGGCTCCGAGG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGAGGCCTGCTGGGTCTaGCCCACCTCGGAGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAEACWV*PTSEPD Trigger: ATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCCCTCTCAGCTGCTGTaGAGGCCTGCTGGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAPSQLL*RPAGSG Trigger: GCCAGACCCAGCAGGCCTCCACAGCAGCTGAGAGGG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCCCTGGGGACTCTCCTaGGCAGGGTTGGCAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAPWGLS*AGLATW Trigger: CCAGGTTGCCAACCCTGCCCAGGAGAGTCCCCAGGG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCATTGACTCGGCGTCGTaGAGGAGGCGCGCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAIDSAS*RRRAGL Trigger: AAGCCCAGCGCGCCTCCTCCACGACGCCGAGTCAAT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTCTGCAGCCTCTGGGTaGTCCTCAGCTGGCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKASAASG*SSAGMP Trigger: AGGCATGCCAGCTGAGGAGCACCCAGAGGCTGCAGA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTGCCCTTGGACTAGCTaGAGCCTCTGCCCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKACPWTS*SLCPGT Trigger: AGTCCCAGGGCAGAGGCTGCAGCTAGTCCAAGGGCA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCATGGCTTCTGCCCTCTaGTCAGGTGGGACTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAMASAL*SGGTPA Trigger: GGCAGGAGTCCCACCTGACCAGAGGGCAGAAGCCAT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTCTCCTGGGCAGGGTTaGCAACCTGGGAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKASPGQG*QPGSVP Trigger: TGGCACACTCCCAGGTTGCCAACCCTGCCCAGGAGA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGCCTCCACCAGCTCCTaGTCATCCTCACTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAASTSS*SSSLST Trigger: TGTGGAGAGTGAGGATGATCAGGAGCTGGTGGAGGC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGTGCGGCCCTCCTCCTaGAAAAACTGGATTAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAVRPSS*KNWISR Trigger: GCGGCTAATCCAGTTTTTGCAGGAGGAGGGCCGCAC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTGCAGCCTCTGCCCTTaGACTAGCTGCAACCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKACSLCP*TSCNLC Trigger: GCAGAGGTTGCAGCTAGTCCAAGGGCAGAGGCTGCA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGCAGGGTTGGCAACCTaGGAGTGTGCCAGAAGACTC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAAGLAT*ECARRL Trigger: GAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCACTAGCAACAGCCTCTaGCCTGAGACTAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKATSNSL*PETSCS Trigger: GCTGCAGCTAGTCTCAGGGCAGAGGCTGTTGCTAGT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTGCTCTTGGATCAGCTaGAGCCTCTGCCCTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKACSWIS*SLCPWT Trigger: AGTCCAAGGGCAGAGGCTGCAGCTGATCCAAGAGCA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTGCCTTTGGACTAGCTaGAGCCTCTGCCCTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKACLWTS*SLCPWT Trigger: AGTCCAAGGGCAGAGGCTGCAGCTAGTCCAAAGGCA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGTACCCGGAGGCTCCTaGCCTCACCTGCCCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYVPGGS*PHLPWG Trigger: TCCCCAGGGCAGGTGAGGCCAGGAGCCTCCGGGTAC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGGCATGCCTGTTCCCTaGGCGAAGGGTGGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYGMPVP*AKGGTC Trigger: GCAGGTGCCACCCTTCGCTCAGGGAACAGGCATGCC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCGTTCCACATCTGCTCTaGTGTCAGCCCTTAGTACCC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAVPHLL*CQPLVP Trigger: GGGTACTAAGGGCTGACATCAGAGCAGATGTGGAAC...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTTCCCCCAGGACACCTaGCTAACATACTCCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAFPQDT*LTYSLH Trigger: ATGGAGGGAGTATGTTAGCCAGGTGTCCTGGGGGAA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCACAAGCTCTGCCTTCTaGTTAGCAGCAGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKATSSAF*LAAASA Trigger: AGCAGAGGCTGCTGCTAACCAGAAGGCAGAGCTTGT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCCCTCTGACTATCTATaGCTTCTGCCCTCTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAPSDYL*LLPSGQ Trigger: CTGACCAGAGGGCAGAAGCCATAGATAGTCAGAGGG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAGTTCTTTGGTTAGCTaGGCCCTCTGCCCTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKASSLVS*ALCPLT Trigger: AGTCAGAGGGCAGAGGGCCCAGCTAACCAAAGAACT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCCTGCCTCCTCCCTCTaGTCATGGAGGACCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYPASSL*SWRTPA Trigger: GGCAGGGGTCCTCCATGACCAGAGGGAGGAGGCAGG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAAGCGTCCTGGGGTCTaGAACCTCACTGTCTTTACC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAKRPGV*NLTVFT Trigger: GGTAAAGACAGTGAGGTTCCAGACCCCAGGACGCTT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAGGACCTCCACCCTCTaGTTTTCTGTAGCACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKARTSTL*FSVAPV Trigger: AACTGGTGCTACAGAAAATCAGAGGGTGGAGGTCCT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCACTGTCGCTGCCATTaGTGCTGTCATAGGTACCTA | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAHCRCH*CCHRYL Trigger: TAGGTACCTATGACAGCAGCAATGGCAGCGACAGTG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTCAACTCACTGTCGCTaGCATTGCTGCTGTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKASTHCR*HCCCHR Trigger: CCTATGACAGCAGCAATGGCAGCGACAGTGAGTTGA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCCCCCTGGTTCTCTaGAGCCTCTGGGTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCPLVL*SLWVLL Trigger: GAGGAGCACCCAGAGGCTGCAGAGAACCAGGGGGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCTACTCTTGGATCAGCTaGAGTCTCTGCCCTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAYSWIS*SLCPWT Trigger: AGTCCAAGGGCAGAGACTGCAGCTGATCCAAGAGTA...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR CCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAACAGCCTCTACTCTTaGATCAGCTGCAGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKANSLYS*ISCSLC Trigger: GCAGAGACTGCAGCTGATCCAAGAGTAGAGGCTGTT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTTGCAGGCTTGGAGATaGCTCTCCACACGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYLQAWR*LSTRPQ Trigger: CTGGGGGCGTGTGGAGAGTCATCTCCAAGCCTGCAA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGGGCCCTCTGCCCTCTaGCTATCTATGGCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYGPSAL*LSMASA Trigger: GGCAGAAGCCATAGATAGTCAGAGGGCAGAGGGCCC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGCTTCCTGTATACCCTaGGGTCCTGCCTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYASCIP*GPASSL Trigger: GAGGGAGGAGGCAGGACCTCAGGGTATACAGGAAGC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCATCAGCTGCAGTCTCTaGCCTTGGACTATCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HMPVVLAEAAIQICEFKAISCSL*PWTIYK Trigger: CTTGTAGATAGTCCAAGGGCAGAGACTGCAGCTGAT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGGCAACCTGGGAGTGTaGCAGAAGACTCTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYGNLGV*QKTLLR Trigger: GCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTCGGCCTTGGATGGCTaGGGCCCCAGGTTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSALDG*GPRLFS Trigger: TGAGAACAACCTGGGGCCCCAGCCATCCAAGGCCGA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTCTGTCGGCCTTGGATaGCTGGGGCCCCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSVGLG*LGPQVV Trigger: AACAACCTGGGGCCCCAGCCATCCAAGGCCGACAGA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTCCCTGAGCGAAGGGTaGCACCTGCTCCTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSLSEG*HLLLPA Trigger: TGCAGGAAGGAGCAGGTGCCACCCTTCGCTCAGGGA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGGGTGCTCCTCAGCTaGCATGCCTGTTCCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYWVLLS*HACSLS Trigger: GCTCAGGGAACAGGCATGCCAGCTGAGGAGCACCCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTCCTCCCTCTGGTCATaGAGGACCCCTGCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSSLWS*RTPALW Trigger: CCAAAGGGCAGGGGTCCTCCATGACCAGAGGGAGGA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCCCTTGGACTAGCTaGAGCCTCTGCCCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCPWTS*SLCPWT Trigger: AGTCCAAGGGCAGAGGCTGCAGCTAGTCCAAGGGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGTTCTTTTGCGGGGTTaGGGTGGGTGTGGAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYVLLRG*GGCGVL Trigger: GAGCACTCCACACCCACCCCAACCCCGCAAAAGAAC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGTTCTCTGCAGCCTCTaGGTGCTCCTCAGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYVLCSL*VLLSWH Trigger: ATGCCAGCTGAGGAGCACCCAGAGGCTGCAGAGAAC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCAGCCTCAGTCCTTaGACTAGCTGCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCSLSP*TSCSLC Trigger: GCAGAGGCTGCAGCTAGTCCAAGGACTGAGGCTGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCAGCCTCTGCCCTTaGACTAGCTTCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCSLCP*TSFSLC Trigger: GCAGAGGCTGAAGCTAGTCCAAGGGCAGAGGCTGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCTGCCCAAGTAACTaGCCGGCATTTTGCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCCPSN*PAFCAP Trigger: AGGTGCGCAAAATGCCGGTCAGTTACTTGGGCAGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR TCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATAGATCCCGAACCAGCTaGGGCTTCCTGTATACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYRSRTS*GFLYTL Trigger: CAGGGTATACAGGAAGCCTCAGCTGGTTCGGGATCT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATATCAGCTGCAGTCTCTaGCCTTGGACTAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYISCSL*PWTSCS Trigger: GCTGCAGCTAGTCCAAGGGCAGAGACTGCAGCTGAT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATAGTCCTTGGACTAGCTaGAGCCTCTGCCCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSPWTS*SLCPWT Trigger: AGTCCAAGGGCAGAGGCTGCAGCTAGTCCAAGGACT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCAGCCTCTGCTCTTaGATCAGCTACAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCSLCS*ISYSLC Trigger: GCAGAGGCTGTAGCTGATCCAAGAGCAGAGGCTGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCAGCCTCTGCTCTTaGATCAGCTGCAGTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCSLCS*ISCSLC Trigger: GCAGAGACTGCAGCTGATCCAAGAGCAGAGGCTGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCAACCTCTGCTCTTaGATCAGCTGCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCNLCS*ISCSLC Trigger: GCAGAGGCTGCAGCTGATCCAAGAGCAGAGGTTGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGTTAGCAGCAGCCTCTaGTATTGGACTAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYVSSSL*YWTSCS Trigger: GCTGCAGCTAGTCCAATAGCAGAGGCTGCTGCTAAC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTGCTCTTGGATCAGCTaGAGTCTCTGCCCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYCSWIS*SLCPWT Trigger: AGTCCAAGGGCAGAGACTGCAGCTGATCCAAGAGCA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATACTAGCTGCAACCTCTaGTCTTGGATCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYTSCNL*SWISCS Trigger: GCTGCAGCTGATCCAAGAGCAGAGGTTGCAGCTAGT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATAGACTCTCCTGCGCATaGGAAACCATGAGAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYRLSCA*ETMRSV Trigger: GACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCT...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCTCAAACATGGGCACTaGAAGATTGACTCGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYLKHGH*KIDSAS Trigger: CGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTCGTCCGAGCTGGCTTaGCTGTGTCTCATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYSSELA*LCLISP Trigger: TGGAGAAATGAGACACAGCCAAGCCAGCTCGGACGA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCTCAGCTTCCTTCGTTaGAGGCTTGGAGATGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYLSFLR*RLGDDS Trigger: AGAGTCATCTCCAAGCCTGCAACGAAGGAAGCTGAG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR GCA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATTACAGCTGTTCTTCTTaGTCTCTGTGTTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYYSCSS*SLCSTS Trigger: AGATGTGGAACACAGAGAGCAAGAAGAACAGCTGTA...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | CTCAGCTGCTGTGGAGGCCTGCTGGGTCTGGCCCACCTCGGAGCCTaGTCTGGGTGCCCAGCCCTTCACCCTCTGTTTCAGCTTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSCCGGLLGLAHLGA*SGCPALHPLFQLPP Trigger: TGGGGGAAGCTGAAACAGAGGGTGAAGGGCTGGGCACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGCAGCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | CTGCTGTGGAGGCCTGCTGGGTCTGGCCCACCTCGGAGCCTGATCTaGGTGCCCAGCCCTTCACCCTCTGTTTCAGCTTCCCCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLWRPAGSGPPRSLI*VPSPSPSVSASPRT Trigger: TGTCCTGGGGGAAGCTGAAACAGAGGGTGAAGGGCTGGGCACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | TTAGTACCCGGAGGCTCCTGGCCTCACCTGCCCTGGGGACTCTCCTaGGCAGGGTTGGCAACCTGGGAGTGTGCCAGAAGACTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVPGGSWPHLPWGLS*AGLATWECARRLSC Trigger: GCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGCCCAGGAGAGTCCCCAGGGCAGGTGAGGCCAGGAGCCTCCGGGTACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | CAGGTTGTTCTCAAACATGGGCACTGGAAGATTGACTCGGCGTCGTaGAGGAGGCGCGCTGGGCTTCTCCCCACGGCGGAGGAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVVLKHGHWKIDSAS*RRRAGLLPTAEEGL Trigger: GAGGCCTTCCTCCGCCGTGGGGAGAAGCCCAGCGCGCCTCCTCCACGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | GGCCTTGGATGGCTGGGGCCCCAGGTTGTTCTCAAACATGGGCACTaGAAGATTGACTCGGCGTCGTGGAGGAGGCGCGCTGGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLGWLGPQVVLKHGH*KIDSASWRRRAGLL Trigger: GAGAAGCCCAGCGCGCCTCCTCCACGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCATCCAAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | AGCTGGCTTGGCTGTGTCTCATTTCTCCAGCCCTCTCAGCTGCTGTaGAGGCCTGCTGGGTCTGGCCCACCTCGGAGCCTGATCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWLGCVSFLQPSQLL*RPAGSGPPRSLIWV Trigger: CACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGCAGCTGAGAGGGCTGGAGAAATGAGACACAGCCAAGCCAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | CCTGCCCTGGGGACTCTCCTGGGCAGGGTTGGCAACCTGGGAGTGTaGCAGAAGACTCTCCTGCGCATGCGAAACCATGAGAAGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PALGTLLGRVGNLGV*QKTLLRMRNHEKRP Trigger: AGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGCCCAGGAGAGTCCCCAGGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | GGTGCCCAGCCCTTCACCCTCTGTTTCAGCTTCCCCCAGGACACCTaGCTAACATACTCCCTCCATCTGTCGGCCTTGGATGGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAQPFTLCFSFPQDT*LTYSLHLSALDGWG Trigger: GCCCCAGCCATCCAAGGCCGACAGATGGAGGGAGTATGTTAGCCAGGTGTCCTGGGGGAAGCTGAAACAGAGGGTGAAGGGCTGGGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | TTCTCTGCAGCCTCTGGGTGCTCCTCAGCTGGCATGCCTGTTCCCTaGGCGAAGGGTGGCACCTGCTCCTTCCTGCATCGTCTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSAASGCSSAGMPVP*AKGGTCSFLHRLRE Trigger: TTCCCTGAGACGATGCAGGAAGGAGCAGGTGCCACCCTTCGCTCAGGGAACAGGCATGCCAGCTGAGGAGCACCCAGAGGCTGCAGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | TTCTGGGCCCTAGATCCCGAACCAGCTGAGGCTTCCTGTATACCCTaGGGTCCTGCCTCCTCCCTCTGGTCATGGAGGACCCCTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWALDPEPAEASCIP*GPASSLWSWRTPAL Trigger: AAGGGCAGGGGTCCTCCATGACCAGAGGGAGGAGGCAGGACCTCAGGGTATACAGGAAGCCTCAGCTGGTTCGGGATCTAGGGCCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | CCTTGGACTAGCTGCAGCCTCTGCCCTGGGACTAGCAACAGCCTCTaGCCTGAGACTAGCTGCAGCCTCAGTCCTTGGACTAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PWTSCSLCPGTSNSL*PETSCSLSPWTSCS Trigger: GCTGCAGCTAGTCCAAGGACTGAGGCTGCAGCTAGTCTCAGGGCAGAGGCTGTTGCTAGTCCCAGGGCAGAGGCTGCAGCTAGTCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | CCTCACTCTCCACATCGCTGCCCAGGAATTTGCTGCCCAAGTAACTaGCCGGCATTTTGCGCACCTTCCTGGTCCTCCCGGAGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHSPHRCPGICCPSN*PAFCAPSWSSRRSS Trigger: GGAGCTCCTCCGGGAGGACCAGGAAGGTGCGCAAAATGCCGGTCAGTTACTTGGGCAGCAAATTCCTGGGCAGCGATGTGGAGAGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | TCCTGGGCAGGGTTGGCAACCTGGGAGTGTGCCAGAAGACTCTCCTaGGCATGCGAAACCATGAGAAGCGTCCTGGGGTCTGGAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWAGLATWECARRLS*ACETMRSVLGSGTS Trigger: TGAGGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | CTCTGGGTGCTCCTCAGCTGGCATGCCTGTTCCCTGAGCGAAGGGTaGCACCTGCTCCTTCCTGCATCGTCTCAGGGAAACCCACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWVLLSWHACSLSEG*HLLLPASSQGNPLD Trigger: ATCAAGTGGGTTTCCCTGAGACGATGCAGGAAGGAGCAGGTGCCACCCTTCGCTCAGGGAACAGGCATGCCAGCTGAGGAGCACCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | GCAGGGTTGGCAACCTGGGAGTGTGCCAGAAGACTCTCCTGCGCATaGGAAACCATGAGAAGCGTCCTGGGGTCTGGAACCTCACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGLATWECARRLSCA*ETMRSVLGSGTSLS Trigger: AGACAGTGAGGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | ATACGGGCCACATCTTCCAGGGTGCGGCCCTCCTCCTGCAAAAACTaGATTAGCCGCTCCCGAAACTCAGCTTCCTTCGTTGCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRATSSRVRPSSCKN*ISRSRNSASFVAGL Trigger: CAAGCCTGCAACGAAGGAAGCTGAGTTTCGGGAGCGGCTAATCCAGTTTTTGCAGGAGGAGGGCCGCACCCTGGAAGATGTGGCCCGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | GTCGCTGCCATTGCTGCTGTCATAGGTACCTACAACCAGCCGAAGTaGAGGAGTGACCATCTGCGGGACTCTCCTCACTCTCAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAAIAAVIGTYNQPK*RSDHLRDSPHSQLL Trigger: AAGGAGCTGAGAGTGAGGAGAGTCCCGCAGATGGTCACTCCTCCACTTCGGCTGGTTGTAGGTACCTATGACAGCAGCAATGGCAGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCAGCTCCTTGGTTCTTTaGCGGGGTTGGGGTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HMPVVLAEAAIQICEFKASSLVL*RGWGGC Trigger: ACACCCACCCCAACCCCGCAAAAGAACCAAGGAGCT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | GACACCTGGCTAACATACTCCCTCCATCTGTCGGCCTTGGATGGCTaGGGCCCCAGGTTGTTCTCAAACATGGGCACTGGAAGATTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DTWLTYSLHLSALDG*GPRLFSNMGTGRLT Trigger: AGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCATCCAAGGCCGACAGATGGAGGGAGTATGTTAGCCAGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCATCGTCCGAGCTGGCTaGGCTGTGTCTCATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HMPVVLAEAAIQICEFKAIVRAG*AVSHFS Trigger: GGAGAAATGAGACACAGCCAAGCCAGCTCGGACGAT...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | TTTTGCGCACCTTCCTGGTCCTCCCGGAGGAGCTCCTGTTGCCTTTaGCTTTGGAGGTATCGAAGTCACTCAACTCACTGTCGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FCAPSWSSRRSSCCL*LWRYRSHSTHCRCH Trigger: ATGGCAGCGACAGTGAGTTGAGTGACTTCGATACCTCCAAAGTCAAAGGCAACAGGAGCTCCTCCGGGAGGACCAGGAAGGTGCGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 90 bp | CAACCTGGGAGTGTGCCAGAAGACTCTCCTGCGCATGCGAAACCATaGGAAGCGTCCTGGGGTCTGGAACCTCACTGTCTTTACCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPGSVPEDSPAHAKP*EASWGLEPHCLYLF Trigger: AAACAGGTAAAGACAGTGAGGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | TTTTCGATGATACGGGCCACATCTTCCAGGGTGCGGCCCTCCTCCTaGAAAAACTGGATTAGCCGCTCCCGAAACTCAGCTTCCTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FSMIRATSSRVRPSS*KNWISRSRNSASFV Trigger: AACGAAGGAAGCTGAGTTTCGGGAGCGGCTAATCCAGTTTTTGCAGGAGGAGGGCCGCACCCTGGAAGATGTGGCCCGTATCATCGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 90 bp | AAGCTCTGCCTTCTGGTTAGCAGCAGCCTCTGCTATTGGACTAGCTaGAGCCTCTACTCTTGGATCAGCTACAGCCTCTGCCCTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: KLCLLVSSSLCYWTS*SLYSWISYSLCPWT Trigger: AGTCCAAGGGCAGAGGCTGTAGCTGATCCAAGAGTAGAGGCTGCAGCTAGTCCAATAGCAGAGGCTGCTGCTAACCAGAAGGCAGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 90 bp | AAGACTCTCCTGCGCATGCGAAACCATGAGAAGCGTCCTGGGGTCTaGAACCTCACTGTCTTTACCTGTTTCTGGGCCCTAGATCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTLLRMRNHEKRPGV*NLTVFTCFWALDPE Trigger: TTCGGGATCTAGGGCCCAGAAACAGGTAAAGACAGTGAGGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | CACATGCCTGTAGTCCTAGCAGAGGCAGCCATCCAGATCTGTGAGTTCAAGGCCCAACAGCCTCTACTCTaGGATCAGCTGCAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HMPVVLAEAAIQICEFKAQQPLL*DQLQSL Trigger: CAGAGACTGCAGCTGATCCAAGAGTAGAGGCTGTTG...GGCCTTGAACTCACAGATCTGGATGGCTGCCTCTGCTAGGACTACAGGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATGGCTGGGGCCCCAGGTaGTTCTCAAACATGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYGWGPR*FSNMGT Trigger: AGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCC...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCTGCAGCCTCTGCTCTaGGATCAGCTACAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYLQPLL*DQLQPL Trigger: CAGAGGCTGTAGCTGATCCAAGAGCAGAGGCTGCAG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCCGGAGGAGCTCCTGTaGCCTTTGACTTTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYPEELL*PLTLEV Trigger: TACCTCCAAAGTCAAAGGCAACAGGAGCTCCTCCGG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS-3UTR CAA 90 bp | AAAATACATAAGAAGTTAAAATACCACCCAGGCCGCCAGGCTCCACGGGCTTATCTCAGGGAAACCCACTaGATCTTGGGCTTCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KIHKKLKYHPGRQAPRAYLRETH*ILGFQR Trigger: ACGCTGGAAGCCCAAGATCAAGTGGGTTTCCCTGAG...ATAAGCCCGTGGAGCCTGGCGGCCTGGGTGGTATTTTAACTTCTTATGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CCAGCCCTCTCAGCTGCTGTGGAGGCCTGCTGGGTCTaGCCCACCTCGGAGCCTGATCTGGGTGCCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PALSAAVEACWV*PTSEPDLGAQP Trigger: GGGCTGGGCACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGCAGCTGAGAGGGCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | AGGCCTGCTGGGTCTGGCCCACCTCGGAGCCTGATCTaGGTGCCCAGCCCTTCACCCTCTGTTTCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPAGSGPPRSLI*VPSPSPSVSAS Trigger: GGAAGCTGAAACAGAGGGTGAAGGGCTGGGCACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | CCCGAAACTCAGCTTCCTTCGTTGCAGGCTTGGAGATaGCTCTCCACACGCCCCCAGCCAGGCGGACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PETQLPSLQAWR*LSTRPQPGGPP Trigger: GGGAGGTCCGCCTGGCTGGGGGCGTGTGGAGAGTCATCTCCAAGCCTGCAACGAAGGAAGCTGAGTTTCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | GCCTCTGGGTGCTCCTCAGCTGGCATGCCTGTTCCCTaGGCGAAGGGTGGCACCTGCTCCTTCCTGCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGCSSAGMPVP*AKGGTCSFLHR Trigger: ACGATGCAGGAAGGAGCAGGTGCCACCCTTCGCTCAGGGAACAGGCATGCCAGCTGAGGAGCACCCAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | CTCATTTCTCCAGCCCTCTCAGCTGCTGTGGAGGCCTaGTGGGTCTGGCCCACCTCGGAGCCTGATCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LISPALSAAVEA*WVWPTSEPDLG Trigger: ACCCAGATCAGGCTCCGAGGTGGGCCAGACCCAGCAGGCCTCCACAGCAGCTGAGAGGGCTGGAGAAATGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | GGTTCTCTGCAGCCTCTGGGTGCTCCTCAGCTGGCATaGCTGTTCCCTGAGCGAAGGGTGGCACCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLQPLGAPQLA*LFPERRVAPAP Trigger: AGGAGCAGGTGCCACCCTTCGCTCAGGGAACAGGCATGCCAGCTGAGGAGCACCCAGAGGCTGCAGAGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CTGCCCTGGGGACTCTCCTGGGCAGGGTTGGCAACCTaGGAGTGTGCCAGAAGACTCTCCTGCGCATGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPWGLSWAGLAT*ECARRLSCACE Trigger: TTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCCTGCCCAGGAGAGTCCCCAGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 72 bp | AGCCGCTCCCGAAACTCAGCTTCCTTCGTTGCAGGCTaGGAGATGACTCTCCACACGCCCCCAGCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSRNSASFVAG*EMTLHTPPARR Trigger: CCGCCTGGCTGGGGGCGTGTGGAGAGTCATCTCCAAGCCTGCAACGAAGGAAGCTGAGTTTCGGGAGCGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 90 bp | AACTGGATTAGCCGCTCCCGAAACTCAGCTTCCTTCGTTGCAGGCTaGGAGATGACTCTCCACACGCCCCCAGCCAGGCGGACCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NWISRSRNSASFVAG*EMTLHTPPARRTSR Trigger: CCGGGAGGTCCGCCTGGCTGGGGGCGTGTGGAGAGTCATCTCCAAGCCTGCAACGAAGGAAGCTGAGTTTCGGGAGCGGCTAATCCAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | TGGCTGGGGCCCCAGGTTGTTCTCAAACATGGGCACTaGAAGATTGACTCGGCGTCGTGGAGGAGGCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: WLGPQVVLKHGH*KIDSASWRRRA Trigger: AGCGCGCCTCCTCCACGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 72 bp | GGCCCCAGGTTGTTCTCAAACATGGGCACTGGAAGATaGACTCGGCGTCGTGGAGGAGGCGCGCTGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPRLFSNMGTGR*TRRRGGGALGF Trigger: GAAGCCCAGCGCGCCTCCTCCACGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | AGCTGCAGCCTCTGCCCTGGGACTAGCAACAGCCTCTaGCCTGAGACTAGCTGCAGCCTCAGTCCTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SCSLCPGTSNSL*PETSCSLSPWT Trigger: AGTCCAAGGACTGAGGCTGCAGCTAGTCTCAGGGCAGAGGCTGTTGCTAGTCCCAGGGCAGAGGCTGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | CCACATCGCTGCCCAGGAATTTGCTGCCCAAGTAACTaGCCGGCATTTTGCGCACCTTCCTGGTCCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PHRCPGICCPSN*PAFCAPSWSSR Trigger: CCGGGAGGACCAGGAAGGTGCGCAAAATGCCGGTCAGTTACTTGGGCAGCAAATTCCTGGGCAGCGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | CTAGATCCCGAACCAGCTGAGGCTTCCTGTATACCCTaGGGTCCTGCCTCCTCCCTCTGGTCATGGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LDPEPAEASCIP*GPASSLWSWRT Trigger: GGTCCTCCATGACCAGAGGGAGGAGGCAGGACCTCAGGGTATACAGGAAGCCTCAGCTGGTTCGGGATCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | GCAACCTGGGAGTGTGCCAGAAGACTCTCCTGCGCATaGGAAACCATGAGAAGCGTCCTGGGGTCTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: ATWECARRLSCA*ETMRSVLGSGT Trigger: GGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | GGGTTGGCAACCTGGGAGTGTGCCAGAAGACTCTCCTaGGCATGCGAAACCATGAGAAGCGTCCTGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLATWECARRLS*ACETMRSVLGS Trigger: AGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACTCCCAGGTTGCCAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS CAA 90 bp | ACATACTCCCTCCATCTGTCGGCCTTGGATGGCTGGGGCCCCAGGTaGTTCTCAAACATGGGCACTGGAAGATTGACTCGGCGTCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TYSLHLSALDGWGPR*FSNMGTGRLTRRRG Trigger: TCCACGACGCCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCATCCAAGGCCGACAGATGGAGGGAGTATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 90 bp | ACTCCGGTCTCCTGTGTTTCTGGAGCTATCATCGTCCGAGCTGGCTaGGCTGTGTCTCATTTCTCCAGCCCTCTCAGCTGCTGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TPVSCVSGAIIVRAG*AVSHFSSPLSCCGG Trigger: GCCTCCACAGCAGCTGAGAGGGCTGGAGAAATGAGACACAGCCAAGCCAGCTCGGACGATGATAGCTCCAGAAACACAGGAGACCGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS GCA 72 bp | CCTCTGGTCAGGTGGGACTCCTGCCCTGAGATAAGCTaGAGCCTCTACCCTCAGATTAGCTTCAGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLVRWDSCPEIS*SLYPQISFSLC Trigger: GCAGAGGCTGAAGCTAATCTGAGGGTAGAGGCTGCAGCTTATCTCAGGGCAGGAGTCCCACCTGACCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 72 bp | CTCCATCTGTCGGCCTTGGATGGCTGGGGCCCCAGGTaGTTCTCAAACATGGGCACTGGAAGATTGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHLSALDGWGPR*FSNMGTGRLTR Trigger: CCGAGTCAATCTTCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCATCCAAGGCCGACAGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | CTTTACCTGTTTCTGGGCCCTAGATCCCGAACCAGCTaGGGCTTCCTGTATACCCTGAGGTCCTGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLFLGPRSRTS*GFLYTLRSCLL Trigger: GAGGAGGCAGGACCTCAGGGTATACAGGAAGCCTCAGCTGGTTCGGGATCTAGGGCCCAGAAACAGGTAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CTAACATACTCCCTCCATCTGTCGGCCTTGGATGGCTaGGGCCCCAGGTTGTTCTCAAACATGGGCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTYSLHLSALDG*GPRLFSNMGTG Trigger: TCCAGTGCCCATGTTTGAGAACAACCTGGGGCCCCAGCCATCCAAGGCCGACAGATGGAGGGAGTATGTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CCCTTCACCCTCTGTTTCAGCTTCCCCCAGGACACCTaGCTAACATACTCCCTCCATCTGTCGGCCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PFTLCFSFPQDT*LTYSLHLSALD Trigger: ATCCAAGGCCGACAGATGGAGGGAGTATGTTAGCCAGGTGTCCTGGGGGAAGCTGAAACAGAGGGTGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CCTGGGGTCTGGAACCTCACTGTCTTTACCTGTTTCTaGGCCCTAGATCCCGAACCAGCTGAGGCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGVWNLTVFTCF*ALDPEPAEASC Trigger: ACAGGAAGCCTCAGCTGGTTCGGGATCTAGGGCCCAGAAACAGGTAAAGACAGTGAGGTTCCAGACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | AGTGTGCCAGAAGACTCTCCTGCGCATGCGAAACCATaGGAAGCGTCCTGGGGTCTGGAACCTCACTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVPEDSPAHAKP*EASWGLEPHCL Trigger: AAGACAGTGAGGTTCCAGACCCCAGGACGCTTCTCATGGTTTCGCATGCGCAGGAGAGTCTTCTGGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | GTACCTACAACCAGCCGAAGTGGAGGAGTGACCATCTaGGGGACTCTCCTCACTCTCAGCTCCTTGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPTTSRSGGVTI*GTLLTLSSLVL Trigger: AAGAACCAAGGAGCTGAGAGTGAGGAGAGTCCCGCAGATGGTCACTCCTCCACTTCGGCTGGTTGTAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | TCTTGGATCAGCTACAGCCTCTGCCCTTGGACTAGCTaGAGCCTCTGCTCTTGGACTAGCAACAGCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SWISYSLCPWTS*SLCSWTSNSLY Trigger: GTAGAGGCTGTTGCTAGTCCAAGAGCAGAGGCTGCAGCTAGTCCAAGGGCAGAGGCTGTAGCTGATCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | CCTTGGACTAGCTGCAGCCTCTGCTCTTGGATCAGCTaGAGTCTCTGCCCTTGGACTATCTACAAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWTSCSLCSWIS*SLCPWTIYKLC Trigger: GCAGAGCTTGTAGATAGTCCAAGGGCAGAGACTGCAGCTGATCCAAGAGCAGAGGCTGCAGCTAGTCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | ACATCTTCCAGGGTGCGGCCCTCCTCCTGCAAAAACTaGATTAGCCGCTCCCGAAACTCAGCTTCCTTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TSSRVRPSSCKN*ISRSRNSASFV Trigger: AACGAAGGAAGCTGAGTTTCGGGAGCGGCTAATCCAGTTTTTGCAGGAGGAGGGCCGCACCCTGGAAGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | CCTGTGTTTCTGGAGCTATCATCGTCCGAGCTGGCTTaGCTGTGTCTCATTTCTCCAGCCCTCTCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVFLELSSSELA*LCLISPALSAA Trigger: AGCAGCTGAGAGGGCTGGAGAAATGAGACACAGCCAAGCCAGCTCGGACGATGATAGCTCCAGAAACACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | GGTCTCCTGTGTTTCTGGAGCTATCATCGTCCGAGCTaGCTTGGCTGTGTCTCATTTCTCCAGCCCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLLCFWSYHRPS*LGCVSFLQPSQ Trigger: CTGAGAGGGCTGGAGAAATGAGACACAGCCAAGCCAGCTCGGACGATGATAGCTCCAGAAACACAGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | AGCCTCTGCTCTTGGACTAGCAACAGCCTCTACTCTTaGATCAGCTGCAGTCTCTGCCCTTGGACTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLCSWTSNSLYS*ISCSLCPWTSC Trigger: GCAGCTAGTCCAAGGGCAGAGACTGCAGCTGATCCAAGAGTAGAGGCTGTTGCTAGTCCAAGAGCAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 72 bp | TTGCGCACCTTCCTGGTCCTCCCGGAGGAGCTCCTGTaGCCTTTGACTTTGGAGGTATCGAAGTCACTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRTFLVLPEELL*PLTLEVSKSLN Trigger: GTTGAGTGACTTCGATACCTCCAAAGTCAAAGGCAACAGGAGCTCCTCCGGGAGGACCAGGAAGGTGCGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 72 bp | TCCTGTGTTTCTGGAGCTATCATCGTCCGAGCTGGCTaGGCTGTGTCTCATTTCTCCAGCCCTCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCVSGAIIVRAG*AVSHFSSPLSC Trigger: GCAGCTGAGAGGGCTGGAGAAATGAGACACAGCCAAGCCAGCTCGGACGATGATAGCTCCAGAAACACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CAA 90 bp | ATTTTGCGCACCTTCCTGGTCCTCCCGGAGGAGCTCCTGTTGCCTTaGACTTTGGAGGTATCGAAGTCACTCAACTCACTGTCGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILRTFLVLPEELLLP*TLEVSKSLNSLSLP Trigger: TGGCAGCGACAGTGAGTTGAGTGACTTCGATACCTCCAAAGTCAAAGGCAACAGGAGCTCCTCCGGGAGGACCAGGAAGGTGCGCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS TCA 72 bp | ACCCCTGCCCTTTGGTCAGCTAGGACCTCCACCCTCTaGTTTTCTGTAGCACCAGTTCTTTGGTTAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPALWSARTSTL*FSVAPVLWLAG Trigger: CCCAGCTAACCAAAGAACTGGTGCTACAGAAAATCAGAGGGTGGAGGTCCTAGCTGACCAAAGGGCAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS GCA 72 bp | CTTCTGGTTAGCAGCAGCCTCTGCTATTGGACTAGCTaGAGCCTCTACTCTTGGATCAGCTACAGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVSSSLCYWTS*SLYSWISYSLC Trigger: GCAGAGGCTGTAGCTGATCCAAGAGTAGAGGCTGCAGCTAGTCCAATAGCAGAGGCTGCTGCTAACCAGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | ATTGCTGCTGTCATAGGTACCTACAACCAGCCGAAGTaGAGGAGTGACCATCTGCGGGACTCTCCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: IAAVIGTYNQPK*RSDHLRDSPHS Trigger: AGAGTGAGGAGAGTCCCGCAGATGGTCACTCCTCCACTTCGGCTGGTTGTAGGTACCTATGACAGCAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
||
| CDS CCA 72 bp | AGCCTCTGCTCTTGGATCAGCTGCAGTCTCTGCCCTTaGACTATCTACAAGCTCTGCCTTCTGGTTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLCSWISCSLCP*TIYKLCLLVSS Trigger: GCTGCTAACCAGAAGGCAGAGCTTGTAGATAGTCCAAGGGCAGAGACTGCAGCTGATCCAAGAGCAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS CAA 72 bp | ACCTTCCTGGTCCTCCCGGAGGAGCTCCTGTTGCCTTaGACTTTGGAGGTATCGAAGTCACTCAACTCACTG | + |
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Preference number: 6 (lower is better) Translates to: TFLVLPEELLLP*TLEVSKSLNSL Trigger: CAGTGAGTTGAGTGACTTCGATACCTCCAAAGTCAAAGGCAACAGGAGCTCCTCCGGGAGGACCAGGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS GCA 72 bp | TATCGAAGTCACTCAACTCACTGTCGCTGCCATTGCTaGTGTCATAGGTACCTACAACCAGCCGAAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: YRSHSTHCRCHC*CHRYLQPAEVE Trigger: CTCCACTTCGGCTGGTTGTAGGTACCTATGACAGCAGCAATGGCAGCGACAGTGAGTTGAGTGACTTCGATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS GCA 72 bp | AGGTATCGAAGTCACTCAACTCACTGTCGCTGCCATTaGTGCTGTCATAGGTACCTACAACCAGCCGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RYRSHSTHCRCH*CCHRYLQPAEV Trigger: CACTTCGGCTGGTTGTAGGTACCTATGACAGCAGCAATGGCAGCGACAGTGAGTTGAGTGACTTCGATACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS GCA 72 bp | CTTTGGAGGTATCGAAGTCACTCAACTCACTGTCGCTaGCATTGCTGCTGTCATAGGTACCTACAACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LWRYRSHSTHCR*HCCCHRYLQPA Trigger: GGCTGGTTGTAGGTACCTATGACAGCAGCAATGGCAGCGACAGTGAGTTGAGTGACTTCGATACCTCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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| CDS GCA 72 bp | ATCTACAAGCTCTGCCTTCTGGTTAGCAGCAGCCTCTaGTATTGGACTAGCTGCAGCCTCTACTCTTGGATC | + |
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Preference number: 6 (lower is better) Translates to: IYKLCLLVSSSL*YWTSCSLYSWI Trigger: GATCCAAGAGTAGAGGCTGCAGCTAGTCCAATAGCAGAGGCTGCTGCTAACCAGAAGGCAGAGCTTGTAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094805.5 |
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