Pregenerated sensors for CCDC78 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071202Ensembl transcript IDs: ENSMUST00000095500.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGAAATCTGCCTGCCTCTaGCTCTGCCTCCGGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: NPDFCLFQESLPGAGCPEKSACL*LCLRSA Trigger: AGCACTCCGGAGGCAGAGGCAGAGGCAGGCAGATTT...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| 3UTR-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGACTCAGAAATCTGCCTaGCTCTGCCTCTGCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SILTFVCSRNHFLGQGVQTQKSA*LCLCLR Trigger: CCGGAGGCAGAGGCAGAGGCAGGCAGATTTCTGAGT...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| 3UTR-3UTR GCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGTCGAACTCAGAAATCTaGCTGCCTCTGCCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: NPDFCLFQESLPGAGCPESNSEI*LPLPLP Trigger: AGGCAGAGGCAGAGGCAGGCAGATTTCTGAGTTCGA...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTGTGACTCTGAGTCCTTaGGCGCTGAGGCCTAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RVSRGFHAGCKEISFEIFVTLSP*ALRPSG Trigger: TCCACTAGGCCTCAGCGCCCAAGGACTCAGAGTCAC...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGAGTGGCCCAGGCTAGGTaGCCAGAAGCACTTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRVAQAR*PEALGS Trigger: GCTGCCAAGTGCTTCTGGGCACCTAGCCTGGGCCAC...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGAGCTGACCAGTTGTCCTaGCTTCCTCTCGGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRADQLS*LPLGLP Trigger: AGGGAGCCCGAGAGGAAGCCAGGACAACTGGTCAGC...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGTCCTCCTGCAGCTTCTaGTGGCCTCCTGGAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQSSCSF*WPPGGS Trigger: AGAGCCTCCAGGAGGCCAGCAGAAGCTGCAGGAGGA...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGACACTTGTGTCTCCAGTaGCTGCTGCCTGGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRHLCLQ*LLPGSV Trigger: CACAGAGCCAGGCAGCAGGCACTGGAGACACAAGTG...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGGGGCCGCCTGATTTGTaGTACTGGCGTTCTCCACCG | + |
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Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQGPPDL*YWRSPP Trigger: CGGTGGAGAACGCCAGTAGCACAAATCAGGCGGCCC...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR TCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGCGTTCTAGCTCTGCCTaGGTGTCCTGGGAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQRSSSA*VSWEKS Trigger: GGACTTCTCCCAGGACACTCAGGCAGAGCTAGAACG...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGGGTGGCACCTGGTGTTaGCCCAGATTGGCCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQGGTWC*PRLAIG Trigger: ACCAATGGCCAATCTGGGGCAACACCAGGTGCCACC...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGACCAGTCCTCAGCTCCTaGAGCAACGTTCTCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRPVLSS*SNVLCN Trigger: GTTGCAGAGAACGTTGCTCCAGGAGCTGAGGACTGG...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGAGCAGCCCTAATGTCCTaGAGAGTGGACTCCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRAALMS*RVDSRK Trigger: TTTCCTGGAGTCCACTCTGCAGGACATTAGGGCTGC...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGAGTTCAGTGGCCCAGTaGATGGGTAATGGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NPDFCLFQESLPGAGCPESSVAQ*MGNGSR Trigger: CCTGGAGCCATTACCCATGCACTGGGCCACTGAACT...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGAAGTCCTGCAGCCTCTaGTGGATTTGGGCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: NPDFCLFQESLPGAGCPEKSCSL*WIWAQD Trigger: ATCCTGGGCCCAAATCCAGCAGAGGCTGCAGGACTT...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGTCCTGGGAGAAGTCCTaGAGCCTCTGCTGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: NPDFCLFQESLPGAGCPESWEKS*SLCWIW Trigger: CCAAATCCAGCAGAGGCTGCAGGACTTCTCCCAGGA...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGGCTCCCTGCAACTGCTaGCTTAGGACTCCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPDFCLFQESLPGAGCPEAPCNC*LRTPTC Trigger: ACAAGTGGGAGTCCTAAGCCAGCAGTTGCAGGGAGC...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATACCTGCCCAAGTGCTaGTCCACATACTCCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRYLPKC*STYSCS Trigger: GCTACAGGAGTATGTGGACCAGCACTTGGGCAGGTA...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGCAGGTTGATGGCTGTTaGAAAGGTAGCCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQQVDGC*KGSPAG Trigger: ACCTGCAGGGCTACCTTTGCAACAGCCATCAACCTG...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGTCGTTTTCTCTTGGGTaGCTGAGTTCAGTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQSFSLG*LSSVAQ Trigger: CTGGGCCACTGAACTCAGCCACCCAAGAGAAAACGA...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGCTTGGGGTCTGGAGATaGCACATACTCCATAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQLGVWR*HILHRG Trigger: TCCTCTATGGAGTATGTGGCATCTCCAGACCCCAAG...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGCAGGCACCATTTCCATaGAGTTCTAGCTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQQAPFP*SSSSST Trigger: GGTGCTAGAGCTAGAACTGCATGGAAATGGTGCCTG...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTGTGGGACCCCTGGCTTaGGGTCTGGAGATGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFVGPLA*GLEMPH Trigger: ATGTGGCATCTCCAGACCCCAAGCCAGGGGTCCCAC...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTGTGCCCAGAAGCACTTaGCAGCCAGTCCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFVPRST*QPVLSS Trigger: GGAGCTGAGGACTGGCTGCCAAGTGCTTCTGGGCAC...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTAGGAGGCCAGCACCATaGCTTGGGAAGCCAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFRRPAP*LGKPVA Trigger: AGCAACTGGCTTCCCAAGCCATGGTGCTGGCCTCCT...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGATACTCGTTTTCTCTTaGGTGGCTGAGTTCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NPDFCLFQESLPGAGCPEILVFS*VAEFSG Trigger: GCCACTGAACTCAGCCACCCAAGAGAAAACGAGTAT...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTTCCTGCAGCCTCTGCTaGATTTGGGCCCAGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFSCSLC*IWAQDA Trigger: TGCATCCTGGGCCCAAATCCAGCAGAGGCTGCAGGA...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTTTTCTCTTGGGTGGCTaGGTTCAGTGGCCCAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFFLLGG*VQWPSA Trigger: TGCACTGGGCCACTGAACTCAGCCACCCAAGAGAAA...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGTTTCAAGATTTCCTaGTTGTACCTGCCCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SILTFVCSRNHFLGQGVQSFKIS*LYLPKC Trigger: GCACTTGGGCAGGTACAAGCAGGAAATCTTGAAACT...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTAGCCTCTGCTGGATTTaGGCCCAGGATGCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFSLCWI*AQDAVS Trigger: AGACACTGCATCCTGGGCCCAAATCCAGCAGAGGCT...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTAGCTCCAGATGTGTCTaGTGCTCTGTCTCCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFSSRCV*CSVSRL Trigger: TAGCCTGGAGACAGAGCATCAGACACATCTGGAGCT...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTCATTTCAGTTCCTCCTaGAGCTTCTGCTGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RVSRGFHAGCKEISFEIFHFSSS*SFCWPP Trigger: AGGAGGCCAGCAGAAGCTGCAGGAGGAACTGAAATG...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | CTGCCCAAGTGCTGGTCCACATACTCCTGTAGCTCAGAAAGCTGCTaGTCTGCCATGGTGGCCCGGACCATCAGCTGTGCCCGTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: LPKCWSTYSCSSESC*SAMVARTISCARSR Trigger: ACGGGAACGGGCACAGCTGATGGTCCGGGCCACCATGGCAGAGCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACCAGCACTTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | AGGCCAGCACCATGGCTTGGGAAGCCAGTTGCTGACCAGTTGTCCTaGCTTCCTCTCGGGCTCCCTGCAACTGCTGGCTTAGGACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RPAPWLGKPVADQLS*LPLGLPATAGLGLP Trigger: TGGGAGTCCTAAGCCAGCAGTTGCAGGGAGCCCGAGAGGAAGCCAGGACAACTGGTCAGCAACTGGCTTCCCAAGCCATGGTGCTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | GTAGGTCCGGGCAGCTTGGGCCAGCTGTTGCTCTCGGGTTCGGTGTaGAGCCCTAATGTCCTGCAGAGTGGACTCCAGGAAAGCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: VGPGSLGQLLLSGSV*SPNVLQSGLQESLK Trigger: CTTCAAGCTTTCCTGGAGTCCACTCTGCAGGACATTAGGGCTGCACACCGAACCCGAGAGCAACAGCTGGCCCAAGCTGCCCGGACCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | TACCTGCCCAAGTGCTGGTCCACATACTCCTGTAGCTCAGAAAGCTaGTGCTCTGCCATGGTGGCCCGGACCATCAGCTGTGCCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: YLPKCWSTYSCSSES*CSAMVARTISCARS Trigger: GGAACGGGCACAGCTGATGGTCCGGGCCACCATGGCAGAGCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACCAGCACTTGGGCAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | GGTCCACATACTCCTGTAGCTCAGAAAGCTGCTGCTCTGCCATGGTaGCCCGGACCATCAGCTGTGCCCGTTCCCGTTCTAGCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: GPHTPVAQKAAALPW*PGPSAVPVPVLALP Trigger: AGGCAGAGCTAGAACGGGAACGGGCACAGCTGATGGTCCGGGCCACCATGGCAGAGCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | GCTGGTCCACATACTCCTGTAGCTCAGAAAGCTGCTGCTCTGCCATaGTGGCCCGGACCATCAGCTGTGCCCGTTCCCGTTCTAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: AGPHTPVAQKAAALP*WPGPSAVPVPVLAL Trigger: CAGAGCTAGAACGGGAACGGGCACAGCTGATGGTCCGGGCCACCATGGCAGAGCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | CCTGCAGAGTGGACTCCAGGAAAGCTTGAAGGGCCGCCTGATTTGTaGTACTGGCGTTCTCCACCGTCTCTCTGGCATAGTGCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAEWTPGKLEGPPDL*YWRSPPSLWHSAAA Trigger: GGCTGCAGCACTATGCCAGAGAGACGGTGGAGAACGCCAGTAGCACAAATCAGGCGGCCCTTCAAGCTTTCCTGGAGTCCACTCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | TCCTGCAGCTTCTGCTGGCCTCCTGGAGGCTCTAATGGTGGCACCTaGTGTTGCCCCAGATTGGCCATTGGTTGGACTTTATGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SCSFCWPPGGSNGGT*CCPRLAIGWTLCPW Trigger: CCAGGGACATAAAGTCCAACCAATGGCCAATCTGGGGCAACACCAGGTGCCACCATTAGAGCCTCCAGGAGGCCAGCAGAAGCTGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | ACTGCTGGCTTAGGACTCCCACTTGTGTCTCCAGTGCCTGCTGCCTaGCTCTGTGATGCTCCAGAAGCCATTTCAGTTCCTCCTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TAGLGLPLVSPVPAA*LCDAPEAISVPPAA Trigger: AGCTGCAGGAGGAACTGAAATGGCTTCTGGAGCATCACAGAGCCAGGCAGCAGGCACTGGAGACACAAGTGGGAGTCCTAAGCCAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | GGGGCAGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGAGGCCAGCACCATGGCTaGGGAAGCCAGTTGCTGACC | + |
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Preference number: 5 (lower is better) Translates to: GAGCPEGSMLAVKRFLLRGQHHG*GSQLLT Trigger: GGTCAGCAACTGGCTTCCCAAGCCATGGTGCTGGCC...TCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGGTAGGTCCGGGCAGCTaGGGCCAGCTGTTGCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: NPDFCLFQESLPGAGCPEVGPGS*GQLLLS Trigger: CGAGAGCAACAGCTGGCCCAAGCTGCCCGGACCTAC...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | CGGCCATACTCGTTTTCTCTTGGGTGGCTGAGTTCAGTGGCCCAGTaGATGGGTAATGGCTCCAGGTTGATGGCTGTTGCAAAGGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: RPYSFSLGWLSSVAQ*MGNGSRLMAVAKVA Trigger: GGCTACCTTTGCAACAGCCATCAACCTGGAGCCATTACCCATGCACTGGGCCACTGAACTCAGCCACCCAAGAGAAAACGAGTATGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 90 bp | CTCAGCTCCTGGAGCAACGTTCTCTGCAACTCGAAGTGGGACCCCTaGCTTGGGGTCTGGAGATGCCACATACTCCATAGAGGAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LSSWSNVLCNSKWDP*LGVWRCHILHRGKK Trigger: CTTCTTTCCTCTATGGAGTATGTGGCATCTCCAGACCCCAAGCCAGGGGTCCCACTTCGAGTTGCAGAGAACGTTGCTCCAGGAGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGCTTGGGCCAGCTGTaGCTCTCGGGTTCGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SILTFVCSRNHFLGQGVQSLGQL*LSGSVC Trigger: GCACACCGAACCCGAGAGCAACAGCTGGCCCAAGCT...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGCAGCCTCTGCTGGATTaGGGCCCAGGATGCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SILTFVCSRNHFLGQGVQQPLLD*GPGCSV Trigger: GACACTGCATCCTGGGCCCAAATCCAGCAGAGGCTG...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | GTTCTCTGCAACTCGAAGTGGGACCCCTGGCTTGGGGTCTGGAGATaGCACATACTCCATAGAGGAAAGAAGTTCTGGCCTCTGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: VLCNSKWDPWLGVWR*HILHRGKKFWPLIH Trigger: ATGGATCAGAGGCCAGAACTTCTTTCCTCTATGGAGTATGTGGCATCTCCAGACCCCAAGCCAGGGGTCCCACTTCGAGTTGCAGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | TCCAGTCGAAGAATTTCCCTCCTCAGCTCAAAGACTTCAGCTTCATaGTGTTCGCGCAGGTGGTGGGTTGCAATCTGCAGATCAACTAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRRISLLSSKTSAS*CSRRWWVAICRSTS Trigger: GCTAGTTGATCTGCAGATTGCAACCCACCACCTGCGCGAACAGCATGAAGCTGAAGTCTTTGAGCTGAGGAGGGAAATTCTTCGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTTGGTGGCACCTGGTGTaGCCCCAGATTGGCCATTGG | + |
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Preference number: 5 (lower is better) Translates to: RVSRGFHAGCKEISFEIFWWHLV*PQIGHW Trigger: CCAATGGCCAATCTGGGGCAACACCAGGTGCCACCA...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | AATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGAGGCCAGTGGCTGTGACTaGTTCTCCTTGGAAGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: NPDFCLFQESLPGAGCPEASGCD*FSLEVS Trigger: TGAAACTTCCAAGGAGAACAAGTCACAGCCACTGGC...CTCTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 90 bp | AAGACTTCAGCTTCATGCTGTTCGCGCAGGTGGTGGGTTGCAATCTaGAGATCAACTAGCTCCTTAGAAATCTGCAACCGCTGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KTSASCCSRRWWVAI*RSTSSLEICNRCSS Trigger: TGAAGAACAGCGGTTGCAGATTTCTAAGGAGCTAGTTGATCTGCAGATTGCAACCCACCACCTGCGCGAACAGCATGAAGCTGAAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | TCAATCCTGACTTTTGTTTGTTCCAGGAATCACTTCCTGGGGCAGGGTGTCCAGTGTGACTTGTTCTCCTaGGAAGTTTCACCAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: SILTFVCSRNHFLGQGVQCDLFS*EVSPDP Trigger: GGGATCTGGTGAAACTTCCAAGGAGAACAAGTCACA...CTGGACACCCTGCCCCAGGAAGTGATTCCTGGAACAAACAAAAGTCAGGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTGGACTCCAGGAAAGCTaGAAGGGCCGCCTGATTTGT | + |
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Preference number: 5 (lower is better) Translates to: RVSRGFHAGCKEISFEIFGLQES*KGRLIC Trigger: ACAAATCAGGCGGCCCTTCAAGCTTTCCTGGAGTCC...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS-3UTR CAA 90 bp | AGGGTGTCCAGAGGGTTCCATGCTGGCTGTAAAGAGATTTCTTTTGAGATTTTTTTCAAGATTTCCTGCTaGTACCTGCCCAAGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RVSRGFHAGCKEISFEIFFKISC*YLPKCW Trigger: CCAGCACTTGGGCAGGTACAAGCAGGAAATCTTGAA...AAAAATCTCAAAAGAAATCTCTTTACAGCCAGCATGGAACCCTCTGGACACCCT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | CAGATCTGCCAGGCGCTTTCGGTAGGTCCGGGCAGCTaGGGCCAGCTGTTGCTCTCGGGTTCGGTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QICQALSVGPGS*GQLLLSGSVCS Trigger: GCTGCACACCGAACCCGAGAGCAACAGCTGGCCCAAGCTGCCCGGACCTACCGAAAGCGCCTGGCAGATCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 90 bp | CCTCTGGTTCAGATCTGCCAGGCGCTTTCGGTAGGTCCGGGCAGCTaGGGCCAGCTGTTGCTCTCGGGTTCGGTGTGCAGCCCTAATGTC | + |
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Preference number: 6 (lower is better) Translates to: PLVQICQALSVGPGS*GQLLLSGSVCSPNV Trigger: GACATTAGGGCTGCACACCGAACCCGAGAGCAACAGCTGGCCCAAGCTGCCCGGACCTACCGAAAGCGCCTGGCAGATCTGAACCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | TGGCAGCCAGTCCTCAGCTCCTGGAGCAACGTTCTCTaGAACTCGAAGTGGGACCCCTGGCTTGGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WQPVLSSWSNVL*NSKWDPWLGVW Trigger: CCAGACCCCAAGCCAGGGGTCCCACTTCGAGTTGCAGAGAACGTTGCTCCAGGAGCTGAGGACTGGCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | CCAGTTGTCCTGGCTTCCTCTCGGGCTCCCTGCAACTaGTGGCTTAGGACTCCCACTTGTGTCTCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PVVLASSRAPCN*WLRTPTCVSSA Trigger: GGCACTGGAGACACAAGTGGGAGTCCTAAGCCAGCAGTTGCAGGGAGCCCGAGAGGAAGCCAGGACAACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | GTTGTCCTGGCTTCCTCTCGGGCTCCCTGCAACTGCTaGCTTAGGACTCCCACTTGTGTCTCCAGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVLASSRAPCNC*LRTPTCVSSAC Trigger: GCAGGCACTGGAGACACAAGTGGGAGTCCTAAGCCAGCAGTTGCAGGGAGCCCGAGAGGAAGCCAGGACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | GTGTCCTGGGAGAAGTCCTGCAGCCTCTGCTGGATTTaGGCCCAGGATGCAGTGTCTAGGGCCAGTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VSWEKSCSLCWI*AQDAVSRASGC Trigger: ACAGCCACTGGCCCTAGACACTGCATCCTGGGCCCAAATCCAGCAGAGGCTGCAGGACTTCTCCCAGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | CCAGCACCATGGCTTGGGAAGCCAGTTGCTGACCAGTaGTCCTGGCTTCCTCTCGGGCTCCCTGCAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: PAPWLGKPVADQ*SWLPLGLPATA Trigger: AGCAGTTGCAGGGAGCCCGAGAGGAAGCCAGGACAACTGGTCAGCAACTGGCTTCCCAAGCCATGGTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | CCGGAGCTGACCCTTACAGGAGGCCAGCACCATGGCTaGGGAAGCCAGTTGCTGACCAGTTGTCCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PELTLTGGQHHG*GSQLLTSCPGF Trigger: GAAGCCAGGACAACTGGTCAGCAACTGGCTTCCCAAGCCATGGTGCTGGCCTCCTGTAAGGGTCAGCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | CCATGGCTTGGGAAGCCAGTTGCTGACCAGTTGTCCTaGCTTCCTCTCGGGCTCCCTGCAACTGCTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: PWLGKPVADQLS*LPLGLPATAGL Trigger: TAAGCCAGCAGTTGCAGGGAGCCCGAGAGGAAGCCAGGACAACTGGTCAGCAACTGGCTTCCCAAGCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | TGCTCCAGAAGCCATTTCAGTTCCTCCTGCAGCTTCTaGTGGCCTCCTGGAGGCTCTAATGGTGGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSRSHFSSSCSF*WPPGGSNGGTW Trigger: CCAGGTGCCACCATTAGAGCCTCCAGGAGGCCAGCAGAAGCTGCAGGAGGAACTGAAATGGCTTCTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 90 bp | TGTCCTGCAGAGTGGACTCCAGGAAAGCTTGAAGGGCCGCCTGATTaGTGCTACTGGCGTTCTCCACCGTCTCTCTGGCATAGTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CPAEWTPGKLEGPPD*CYWRSPPSLWHSAA Trigger: TGCAGCACTATGCCAGAGAGACGGTGGAGAACGCCAGTAGCACAAATCAGGCGGCCCTTCAAGCTTTCCTGGAGTCCACTCTGCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS TCA 72 bp | TGCAACCGCTGTTCTTCACTCAGCTCCAGATGTGTCTaGTGCTCTGTCTCCAGGCTAGTGGCCCAGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: CNRCSSLSSRCV*CSVSRLVAQAR Trigger: CCTAGCCTGGGCCACTAGCCTGGAGACAGAGCATCAGACACATCTGGAGCTGAGTGAAGAACAGCGGTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | TGGCCTCCTGGAGGCTCTAATGGTGGCACCTGGTGTTaGCCCAGATTGGCCATTGGTTGGACTTTATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: WPPGGSNGGTWC*PRLAIGWTLCP Trigger: GGGACATAAAGTCCAACCAATGGCCAATCTGGGGCAACACCAGGTGCCACCATTAGAGCCTCCAGGAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | AAGTGCTGGTCCACATACTCCTGTAGCTCAGAAAGCTaGTGCTCTGCCATGGTGGCCCGGACCATCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KCWSTYSCSSES*CSAMVARTISC Trigger: ACAGCTGATGGTCCGGGCCACCATGGCAGAGCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACCAGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | CCTGATTTGTGCTACTGGCGTTCTCCACCGTCTCTCTaGCATAGTGCTGCAGCCGGACAGCATACTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PDLCYWRSPPSL*HSAAAGQHTPR Trigger: ACGAGGAGTATGCTGTCCGGCTGCAGCACTATGCCAGAGAGACGGTGGAGAACGCCAGTAGCACAAATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | TTCTGCTGGCCTCCTGGAGGCTCTAATGGTGGCACCTaGTGTTGCCCCAGATTGGCCATTGGTTGGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: FCWPPGGSNGGT*CCPRLAIGWTL Trigger: TAAAGTCCAACCAATGGCCAATCTGGGGCAACACCAGGTGCCACCATTAGAGCCTCCAGGAGGCCAGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | TGGTGGCACCTGGTGTTGCCCCAGATTGGCCATTGGTaGGACTTTATGTCCCTGGCAGGCACCATTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: WWHLVLPQIGHW*DFMSLAGTISM Trigger: CATGGAAATGGTGCCTGCCAGGGACATAAAGTCCAACCAATGGCCAATCTGGGGCAACACCAGGTGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | AGCCCTAATGTCCTGCAGAGTGGACTCCAGGAAAGCTaGAAGGGCCGCCTGATTTGTGCTACTGGCGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPNVLQSGLQES*KGRLICATGVL Trigger: GAGAACGCCAGTAGCACAAATCAGGCGGCCCTTCAAGCTTTCCTGGAGTCCACTCTGCAGGACATTAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 90 bp | GCTCCTGGAGCAACGTTCTCTGCAACTCGAAGTGGGACCCCTGGCTaGGGGTCTGGAGATGCCACATACTCCATAGAGGAAAGAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: APGATFSATRSGTPG*GSGDATYSIEERSS Trigger: AGAACTTCTTTCCTCTATGGAGTATGTGGCATCTCCAGACCCCAAGCCAGGGGTCCCACTTCGAGTTGCAGAGAACGTTGCTCCAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS TCA 72 bp | TCCTATGTCGGCCATACTCGTTTTCTCTTGGGTGGCTaGGTTCAGTGGCCCAGTGCATGGGTAATGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SYVGHTRFLLGG*VQWPSAWVMAP Trigger: TGGAGCCATTACCCATGCACTGGGCCACTGAACTCAGCCACCCAAGAGAAAACGAGTATGGCCGACATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | AACTCGAAGTGGGACCCCTGGCTTGGGGTCTGGAGATaGCACATACTCCATAGAGGAAAGAAGTTCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: NSKWDPWLGVWR*HILHRGKKFWP Trigger: AGGCCAGAACTTCTTTCCTCTATGGAGTATGTGGCATCTCCAGACCCCAAGCCAGGGGTCCCACTTCGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | TCGTTTTCTCTTGGGTGGCTGAGTTCAGTGGCCCAGTaGATGGGTAATGGCTCCAGGTTGATGGCTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SFSLGWLSSVAQ*MGNGSRLMAVA Trigger: TGCAACAGCCATCAACCTGGAGCCATTACCCATGCACTGGGCCACTGAACTCAGCCACCCAAGAGAAAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | AGTGTCCTATGTCGGCCATACTCGTTTTCTCTTGGGTaGCTGAGTTCAGTGGCCCAGTGCATGGGTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: SVLCRPYSFSLG*LSSVAQCMGNG Trigger: GCCATTACCCATGCACTGGGCCACTGAACTCAGCCACCCAAGAGAAAACGAGTATGGCCGACATAGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | GCTTCATGCTGTTCGCGCAGGTGGTGGGTTGCAATCTaGAGATCAACTAGCTCCTTAGAAATCTGCAACCGC | + |
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Preference number: 6 (lower is better) Translates to: ASCCSRRWWVAI*RSTSSLEICNR Trigger: GCGGTTGCAGATTTCTAAGGAGCTAGTTGATCTGCAGATTGCAACCCACCACCTGCGCGAACAGCATGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CAA 72 bp | GCAGTGTCTAGGGCCAGTGGCTGTGACTTGTTCTCCTaGGAAGTTTCACCAGATCCCTTCTCTGGGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: AVSRASGCDLFS*EVSPDPFSGYS Trigger: ACTGTACCCAGAGAAGGGATCTGGTGAAACTTCCAAGGAGAACAAGTCACAGCCACTGGCCCTAGACACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | AGAATTTCCCTCCTCAGCTCAAAGACTTCAGCTTCATaGTGTTCGCGCAGGTGGTGGGTTGCAATCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RISLLSSKTSAS*CSRRWWVAICR Trigger: TCTGCAGATTGCAACCCACCACCTGCGCGAACAGCATGAAGCTGAAGTCTTTGAGCTGAGGAGGGAAATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | CAGTGTCTAGGGCCAGTGGCTGTGACTTGTTCTCCTTaGAAGTTTCACCAGATCCCTTCTCTGGGTACAGTA | + |
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Preference number: 6 (lower is better) Translates to: QCLGPVAVTCSP*KFHQIPSLGTV Trigger: TACTGTACCCAGAGAAGGGATCTGGTGAAACTTCCAAGGAGAACAAGTCACAGCCACTGGCCCTAGACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS CCA 72 bp | AGTTTCAAGATTTCCTGCTTGTACCTGCCCAAGTGCTaGTCCACATACTCCTGTAGCTCAGAAAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SFKISCLYLPKC*STYSCSSESCC Trigger: GCAGCAGCTTTCTGAGCTACAGGAGTATGTGGACCAGCACTTGGGCAGGTACAAGCAGGAAATCTTGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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| CDS GCA 72 bp | GTTGCAATCTGCAGATCAACTAGCTCCTTAGAAATCTaGAACCGCTGTTCTTCACTCAGCTCCAGATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VAICRSTSSLEI*NRCSSLSSRCV Trigger: GACACATCTGGAGCTGAGTGAAGAACAGCGGTTGCAGATTTCTAAGGAGCTAGTTGATCTGCAGATTGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095500.5 |
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