Pregenerated sensors for CCDC77 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030177Ensembl transcript IDs: ENSMUST00000032283.12, ENSMUST00000112703.8, ENSMUST00000127146.8, ENSMUST00000136829.8, ENSMUST00000144131.8, ENSMUST00000146667.2, ENSMUST00000163827.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGCTGAACTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATaGGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GAELGSPRLGSVCPP*APPLALSKALSALP Trigger: TGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
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| 3UTR TCA 90 bp | TTGTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTaGAAGGAGTCATCAGCACAGCCTAAGCGCATTCTCCAGCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LWAQVTLSQVSRSQP*KESSAQPKRILQPK Trigger: TTTGGGCTGGAGAATGCGCTTAGGCTGTGCTGATGACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR GCA 90 bp | ACACAGCATGGCCAGGTCCTGATCTCCATGGGTGTTGTTCATGGTTaGCTTGTAGAGCATTTGCTCCAGGTCTCGCAGCTTCTGTCGGAG | + |
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Preference number: 1 (lower is better) Translates to: TQHGQVLISMGVVHG*LVEHLLQVSQLLSE Trigger: CTCCGACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCATGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR TCA 90 bp | ATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTGGGCACAGGTaGCCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAAAGGAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: MPLLWTTPGPLCGHR*PCLRSPEANPERSH Trigger: ATGACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR CCA 90 bp | CTGGCCATGAATCAGAGAGATCCACCTGCCTGTACCATGGGTTTGTaGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTATAGGT | + |
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Preference number: 1 (lower is better) Translates to: LAMNQRDPPACTMGL*QSSCLRFPSPGIIG Trigger: ACCTATAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGCAGGTGGATCTCTCTGATTCATGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR CCA 90 bp | CTTCACACAGCATGGCCAGGTCCTGATCTCCATGGGTGTTGTTCATaGTTGCCTTGTAGAGCATTTGCTCCAGGTCTCGCAGCTTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LHTAWPGPDLHGCCS*LPCRAFAPGLAASV Trigger: GACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCATGCTGTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR TCA 90 bp | AAGGCTCACATGCGACTGCAGCCTGCAGAGTCTTCTGGAGAATGCTaGCTCTGTGGGGAGGCTCCTTATGAAAATAGGTCACTTCACCAG | + |
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Preference number: 1 (lower is better) Translates to: KAHMRLQPAESSGEC*LCGEAPYENRSLHQ Trigger: CTGGTGAAGTGACCTATTTTCATAAGGAGCCTCCCCACAGAGTCAGCATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CCA 90 bp | GTATCTTATGAGCTCTCCTGTTGCTGTCACGGACTTCACACAGCATaGCCAGGTCCTGATCTCCATGGGTGTTGTTCATGGTTGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VSYELSCCCHGLHTA*PGPDLHGCCSWLPC Trigger: ACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCATGCTGTGTGAAGTCCGTGACAGCAACAGGAGAGCTCATAAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR TCA 90 bp | AGACTCTTGGTTAGCTCCATGATTTTCTCTTGGTTTCTCTGGTGCTaGACTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: RLLVSSMIFSWFLWC*TWISSTRIRLSSMS Trigger: GCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGAAACCAAGAGAAAATCATGGAGCTAACCAAGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
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| 3UTR TCA 90 bp | CCAAACACTTTAGACTTGAGGTTCTTCAGTTCCCCCTGTATCTTATaGGCTCTCCTGTTGCTGTCACGGACTTCACACAGCATGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PNTLDLRFFSSPCIL*ALLLLSRTSHSMAR Trigger: CCTGGCCATGCTGTGTGAAGTCCGTGACAGCAACAGGAGAGCTCATAAGATACAGGGGGAACTGAAGAACCTCAAGTCTAAAGTGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR GCA 90 bp | CTCCTTGTCCTTTATTCTTACTTGTCTTTTGCTTACTCCAGGATCTaGTTTGGAAGCAGAAGGCTCACATGCGACTGCAGCCTGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LLVLYSYLSFAYSRI*FGSRRLTCDCSLQS Trigger: ACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CCA 90 bp | TGTCCTTTATTCTTACTTGTCTTTTGCTTACTCCAGGATCTGCTTTaGAAGCAGAAGGCTCACATGCGACTGCAGCCTGCAGAGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CPLFLLVFCLLQDLL*KQKAHMRLQPAESS Trigger: AGAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CCA 90 bp | TGTTTCTTGTTTTCATTTTTAGACGTGGTCTTGTGTAGCCCAGGCTaGCCTGGAACTCACCATATAGCCAAGGGTGAATGTGAACTTAGA | + |
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Preference number: 1 (lower is better) Translates to: CFLFSFLDVVLCSPG*PGTHHIAKGECELR Trigger: TCTAAGTTCACATTCACCCTTGGCTATATGGTGAGTTCCAGGCCAGCCTGGGCTACACAAGACCACGTCTAAAAATGAAAACAAGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR TCA 90 bp | TTTGTCCTCTTTCTTCTTACACTGCGCTCTATACTGCGTAATCTTTaGCATCAGGTGATCTTTCTCAAGCATCCATACCTTCTCTTTATT | + |
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Preference number: 1 (lower is better) Translates to: FVLFLLTLRSILRNL*HQVIFLKHPYLLFI Trigger: AATAAAGAGAAGGTATGGATGCTTGAGAAAGATCACCTGATGTCAAAGATTACGCAGTATAGAGCGCAGTGTAAGAAGAAAGAGGACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CAA 90 bp | GATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTaGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DLLDSDPSVLHEPLH*LSRKLCLLSQLRLK Trigger: CTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTTCTGGAGAATGCTaGCTCTGTGGGGAGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TWISSTRIRLSSMSPSTCSSGEC*LCGEAP Trigger: AGGAGCCTCCCCACAGAGTCAGCATTCTCCAGAAGA...GCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTCTCGAAAGCTTAGATCAGGCTGGCCATaGATCAGAGAGATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: DSDPSVLHEPLHLLSRKLRSGWP*IREIHL Trigger: CAGGTGGATCTCTCTGATTCATGGCCAGCCTGATCT...AAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCTGCTCTATCTCTGTGTCCCTCTaGTGGCGCTCAGAAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: RLSSMSPSTCSLESFVCSISVSL*WRSEMP Trigger: GGGCATTTCTGAGCGCCACCAGAGGGACACAGAGAT...AGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
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| 3UTR CAA 90 bp | CACACAGCATGGCCAGGTCCTGATCTCCATGGGTGTTGTTCATGGTaGCCTTGTAGAGCATTTGCTCCAGGTCTCGCAGCTTCTGTCGGA | + |
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Preference number: 2 (lower is better) Translates to: HTAWPGPDLHGCCSW*PCRAFAPGLAASVG Trigger: TCCGACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCATGCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGAGCCACCAAACCTGGCTTTAGGGGAGCTAGCAGGACCAGGGCTTTCTTGTACCATGGGTTTGTaGCAATCCTCCTGCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TGEPPNLALGELAGPGLSCTMGL*QSSCLR Trigger: TCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA...AGAAAGCCCTGGTCCTGCTAGCTCCCCTAAAGCCAGGTTTGGTGGCTCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR-3UTR GCA 90 bp | TATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTGAGCAAGGGCTATGCTaGCCCCTGGTGGTCAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: YIKDKASRMVRLQSARAAEQGLC*PLVVSN Trigger: GTTACTGACCACCAGGGGGCAGCATAGCCCTTGCTC...AGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCCAGCTGCGCCTGAAGTaGTTCCACCTGCAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AYQYIKDKASRMVRLQSAQLRLK*FHLQEQ Trigger: CTGCTCCTGCAGGTGGAAGCACTTCAGGCGCAGCTG...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGAGCCACCAAACCTGGCTTTAGGGGAGCTAGCAGGACCAGGGCTTTCTCAGATTCCCAAGCCCTaGGATTATAGGTGTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TGEPPNLALGELAGPGLSQIPKP*DYRCEL Trigger: TAGCTCACACCTATAATCCCAGGGCTTGGGAATCTG...AGAAAGCCCTGGTCCTGCTAGCTCCCCTAAAGCCAGGTTTGGTGGCTCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCATGGTTGCCTTGTAGAGCATTTGCTCCAGGTCTCGCAGCTTCTGTCGGAGCACCTGCCTGTACCATaGGTTTGTGGCAATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VHGCLVEHLLQVSQLLSEHLPVP*VCGNPP Trigger: AGGAGGATTGCCACAAACCCATGGTACAGGCAGGTG...CTCCGACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGGCGCTCAGAAATGCCCTCCTTGTCCTTTATTCTTACTTGTCTTTTGCTCAGCTGCGCCTGAAGTaGTTCCACCTGCAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LVALRNALLVLYSYLSFAQLRLK*FHLQEQ Trigger: CTGCTCCTGCAGGTGGAAGCACTTCAGGCGCAGCTG...AGCAAAAGACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGAGCGCCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CAA 90 bp | CTTCTACTTCTAGGGCTCGTCGATGCTCCAAGGCCTGATAGCGCTTaGTCATTATCTGTAAGCGCTTGCCCATCTTGTTGGAGCGATCCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLGLVDAPRPDSA*SLSVSACPSCWSDP Trigger: AGGATCGCTCCAACAAGATGGGCAAGCGCTTACAGATAATGACAAAGCGCTATCAGGCCTTGGAGCATCGACGAGCCCTAGAAGTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR CAA 90 bp | GTCCTGATCTCCATGGGTGTTGTTCATGGTTGCCTTGTAGAGCATTaGCTCCAGGTCTCGCAGCTTCTGTCGGAGAGACTTAATGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: VLISMGVVHGCLVEH*LQVSQLLSERLNVR Trigger: ACGGACATTAAGTCTCTCCGACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCATTGTGGCAATCCTCCTaGCTCAGATTCCCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QYIKDKASRMVRLQSARALWQSS*LRFPSP Trigger: AGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAA...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR CAA 90 bp | TTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTaGTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: FIKIDATTLDNSRST*WAQVTLSQVSRSQP Trigger: GGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR CAA 90 bp | AGCAGCATCTCTGTGTCCCTCTGGTGGCGCTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGTCTTTTGCTTACTCCAGGATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSISVSLWWRSEMPS*SFILTCLLLTPGSA Trigger: AGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGAGCGCCACCAGAGGGACACAGAGATGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CAA 90 bp | TTGTCCTTTATTCTTACTTGTCTTTTGCTTACTCCAGGATCTGCTTaGGAAGCAGAAGGCTCACATGCGACTGCAGCCTGCAGAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSFILTCLLLTPGSA*EAEGSHATAACRVF Trigger: GAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGTGTACCATGGGTTTGTaGCAATCCTCCTGCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWCTMGL*QSSCLR Trigger: TCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTTGTGGCAATCCTCCTaGCTCAGATTCCCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYLWQSS*LRFPSP Trigger: AGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAA...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTTTGTCCTCTTTCTTCTTACACTGCGCTCTATACTGCGTAATCTTTGACGTTGTAGAAAGTCCTTaGTGCTCTCGTAGAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PSLSSFFLHCALYCVIFDVVESP*CSRRAV Trigger: AACTGCTCTACGAGAGCACCAAGGACTTTCTACAAC...GTCAAAGATTACGCAGTATAGAGCGCAGTGTAAGAAGAAAGAGGACAAACTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTCTAGGGAAATGCACTGTTCTTGGTACATGTTGGACAGCTTTTTCTCTTCTTGGTTAGCTCCATaGTTTTCTCTTGGTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSSREMHCSWYMLDSFFSSWLAP*FSLGFS Trigger: AGAGAAACCAAGAGAAAATCATGGAGCTAACCAAGA...AGAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR TCA 72 bp | TCTCCCACATGGGCTCTCTCCAGTGCTGACTACAGGTaGGCCACCAAACCTGGCTTTAGGGGAGCTAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SPTWALSSADYR*ATKPGFRGASR Trigger: CCTGCTAGCTCCCCTAAAGCCAGGTTTGGTGGCTCACCTGTAGTCAGCACTGGAGAGAGCCCATGTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
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| 3UTR GCA 72 bp | CGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTaGTTCCACCTGCAGGAGCAGCATCTCTGTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: RKLCLLSQLRLK*FHLQEQHLCVP Trigger: AGGGACACAGAGATGCTGCTCCTGCAGGTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
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| 3UTR GCA 72 bp | ACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTaGTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TRIRLSSMSPST*SLESFVCSPSC Trigger: GCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAACTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTCTCTGGTGCTGAACTaGGATCTCCTCGACTCGGAT | + |
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Preference number: 3 (lower is better) Translates to: LNLDLLDSDPSVLHEPLHSLVLN*DLLDSD Trigger: ATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGA...GTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
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| 3UTR TCA 72 bp | CTCTGGACAACTCCAGGTCCACTTTGTGGGCACAGGTaGCCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LWTTPGPLCGHR*PCLRSPEANPE Trigger: TTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCACAAAGTGGACCTGGAGTTGTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR TCA 72 bp | CTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATaGGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LGSPRLGSVCPP*APPLALSKALS Trigger: AGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
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| 3UTR GCA 72 bp | GCTTTGGAAGCAGAAGGCTCACATGCGACTGCAGCCTaGAGAGTCTTCTGGAGAATGCTGACTCTGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: ALEAEGSHATAA*RVFWRMLTLWG Trigger: TCCCCACAGAGTCAGCATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
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| 3UTR CCA 72 bp | AATCAGAGAGATCCACCTGCCTGTACCATGGGTTTGTaGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NQRDPPACTMGL*QSSCLRFPSPG Trigger: CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGCAGGTGGATCTCTCTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR CCA 72 bp | GAGCTCTCCTGTTGCTGTCACGGACTTCACACAGCATaGCCAGGTCCTGATCTCCATGGGTGTTGTTCATGG | + |
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Preference number: 3 (lower is better) Translates to: ELSCCCHGLHTA*PGPDLHGCCSW Trigger: CCATGAACAACACCCATGGAGATCAGGACCTGGCCATGCTGTGTGAAGTCCGTGACAGCAACAGGAGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
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| 3UTR-3UTR CAA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTAACTCCAGGTCCACTTaGTGGGCACAGGTGACCTTG | + |
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Preference number: 3 (lower is better) Translates to: CTMGLWQSSCLRFPSPGINSRST*WAQVTL Trigger: CAAGGTCACCTGTGCCCACAAAGTGGACCTGGAGTT...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGAGCCACCAAACCTGGCTTTAGGGGAGCTAGCAGGACCAGGGCTTTCTGTGCCAGAGCCAGGTTaGCCACTGTTTTCCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGEPPNLALGELAGPGLSVPEPG*PLFSFF Trigger: AAAGAAGGAAAACAGTGGCAAACCTGGCTCTGGCAC...AGAAAGCCCTGGTCCTGCTAGCTCCCCTAAAGCCAGGTTTGGTGGCTCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR TCA 72 bp | CAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTaGAAGGAGTCATCAGCACAGCCTAAGCGCATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QVTLSQVSRSQP*KESSAQPKRIL Trigger: GAGAATGCGCTTAGGCTGTGCTGATGACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| 3UTR GCA 72 bp | GTAGATCAGGCTGGCCATGAATCAGAGAGATCCACCTaGCTGTACCATGGGTTTGTGGCAATCCTCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VDQAGHESERST*LYHGFVAILLP Trigger: AGGCAGGAGGATTGCCACAAACCCATGGTACAGGCAGGTGGATCTCTCTGATTCATGGCCAGCCTGATCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| 3UTR CCA 72 bp | TCCACCTGCAGGAGCAGCATCTCTGTGTCCCTCTGGTaGCGCTCAGAAATGCCCTCCTTGTCCTTTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: STCRSSISVSLW*RSEMPSLSFIL Trigger: AAGAATAAAGGACAAGGAGGGCATTTCTGAGCGCCACCAGAGGGACACAGAGATGCTGCTCCTGCAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| 3UTR CCA 72 bp | GCATGGCCAGGTCCTGATCTCCATGGGTGTTGTTCATaGTTGCCTTGTAGAGCATTTGCTCCAGGTCTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWPGPDLHGCCS*LPCRAFAPGLA Trigger: TGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| 3UTR GCA 72 bp | TACTCCAGGATCTGCTTTGGAAGCAGAAGGCTCACATaGGACTGCAGCCTGCAGAGTCTTCTGGAGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSRICFGSRRLT*DCSLQSLLENA Trigger: AGCATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| 3UTR CCA 72 bp | CCAATTTTACTTGAGAGCAAGGGCTATGCTGCCCCCTaGTGGTCAGTAACTCGGAACGCAGCTAAGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PILLESKGYAAP*WSVTRNAAKSV Trigger: CACAGACTTAGCTGCGTTCCGAGTTACTGACCACCAGGGGGCAGCATAGCCCTTGCTCTCAAGTAAAATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WISSTRIRLSSMSPSTCSSEMPS*SFILTC Trigger: ACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGA...AGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| 3UTR TCA 72 bp | ATGCGACTGCAGCCTGCAGAGTCTTCTGGAGAATGCTaGCTCTGTGGGGAGGCTCCTTATGAAAATAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MRLQPAESSGEC*LCGEAPYENRS Trigger: TGACCTATTTTCATAAGGAGCCTCCCCACAGAGTCAGCATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| 3UTR CCA 72 bp | ATTTTACTTGAGAGCAAGGGCTATGCTGCCCCCTGGTaGTCAGTAACTCGGAACGCAGCTAAGTCTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: ILLESKGYAAPW*SVTRNAAKSVT Trigger: AGTCACAGACTTAGCTGCGTTCCGAGTTACTGACCACCAGGGGGCAGCATAGCCCTTGCTCTCAAGTAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR TCA 72 bp | GTTAGCTCCATGATTTTCTCTTGGTTTCTCTGGTGCTaGACTTGGATCTCCTCGACTCGGATCCGTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSSMIFSWFLWC*TWISSTRIRLS Trigger: GGACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGAAACCAAGAGAAAATCATGGAGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCAGTCCTTTATTCTTACTaGTCTTTTGCTTACTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LALSKALSALPAAPEVLPVLYSY*SFAYSR Trigger: CCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGAC...TGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| 3UTR TCA 72 bp | TTAGACTTGAGGTTCTTCAGTTCCCCCTGTATCTTATaGGCTCTCCTGTTGCTGTCACGGACTTCACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LDLRFFSSPCIL*ALLLLSRTSHS Trigger: GCTGTGTGAAGTCCGTGACAGCAACAGGAGAGCTCATAAGATACAGGGGGAACTGAAGAACCTCAAGTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| 3UTR CCA 72 bp | TTCTTACTTGTCTTTTGCTTACTCCAGGATCTGCTTTaGAAGCAGAAGGCTCACATGCGACTGCAGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLLVFCLLQDLL*KQKAHMRLQPA Trigger: TGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTGGTTTCTCTGGTGCTGAACTTGGATCTCCTCGACTCGGATCCGTCTGTTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLGFSGAELGSPRLGSVCSEMPS*SFILTC Trigger: ACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGA...ACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGAAACCAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| 3UTR CCA 72 bp | TTTTCATTTTTAGACGTGGTCTTGTGTAGCCCAGGCTaGCCTGGAACTCACCATATAGCCAAGGGTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: FSFLDVVLCSPG*PGTHHIAKGEC Trigger: ACATTCACCCTTGGCTATATGGTGAGTTCCAGGCCAGCCTGGGCTACACAAGACCACGTCTAAAAATGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR TCA 72 bp | AAGTCTGTGACTTTCCATGTGTATGTAATTCCTGAGTaGATGACTTCAGTGAATGACTTTGGTCTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSVTFHVYVIPE*MTSVNDFGLQE Trigger: TTCCTGGAGACCAAAGTCATTCACTGAAGTCATTCACTCAGGAATTACATACACATGGAAAGTCACAGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR TCA 72 bp | TTTCTTCTTACACTGCGCTCTATACTGCGTAATCTTTaGCATCAGGTGATCTTTCTCAAGCATCCATACCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLTLRSILRNL*HQVIFLKHPYL Trigger: AAGGTATGGATGCTTGAGAAAGATCACCTGATGTCAAAGATTACGCAGTATAGAGCGCAGTGTAAGAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAAAGGAGTCCAGCTGCGCCTGAAGTaGTTCCACCTGCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGTGDLVSGLQKPTLKGVQLRLK*FHLQEQ Trigger: CTGCTCCTGCAGGTGGAAGCACTTCAGGCGCAGCTG...GACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTTCTCCCAGCTGCGCCTaGAGTGCTTCCACCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTMGLWQSSCLRFPSPGISPSCA*SASTCR Trigger: CCTGCAGGTGGAAGCACTTCAGGCGCAGCTGGGAGA...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| 3UTR CAA 72 bp | GACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTaGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSDPSVLHEPLH*LSRKLCLLSQL Trigger: CAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTTCCGTCTGTCCTCCATaGGCCCCTCCACTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTMGLWQSSCLRFPSPGISVCPP*APPLAL Trigger: GAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGA...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | TCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCACTCTGTGTACTCCAGAAGCTCCTaGGAAGGGCAAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKLCLLSQLRLKCFHSVYSRSS*EGQRTA Trigger: GGCTGTCCTTTGCCCTTCTCAGGAGCTTCTGGAGTA...CACAGAGTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGCAGAAGGCTCACATGCGACTGCAGCCTGCAGAGTCTTCTGGAGAATGCTTACTCCAGAAGCTCCTaGGAAGGGCAAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRLTCDCSLQSLLENAYSRSS*EGQRTA Trigger: GGCTGTCCTTTGCCCTTCTCAGGAGCTTCTGGAGTA...AGCATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGCTCCAGGATCTGCTTTaGAAGCAGAAGGCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGLQDLL*KQKAHM Trigger: CATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAG...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGAGCCACCAAACCTGGCTTTAGGGGAGCTAGCAGGACCAGGGCTTTCTGGACTTCACACAGCATaGCCAGGTCCTGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGEPPNLALGELAGPGLSGLHTA*PGPDLH Trigger: ATGGAGATCAGGACCTGGCCATGCTGTGTGAAGTCC...AGAAAGCCCTGGTCCTGCTAGCTCCCCTAAAGCCAGGTTTGGTGGCTCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CCA 90 bp | GTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAAAGGAGTCGGACTTCACACAGCATaGCCAGGTCCTGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGTGDLVSGLQKPTLKGVGLHTA*PGPDLH Trigger: ATGGAGATCAGGACCTGGCCATGCTGTGTGAAGTCC...GACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTTCTTCTGGAGAATGCTaGCTCTGTGGGGAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTMGLWQSSCLRFPSPGISSGEC*LCGEAP Trigger: AGGAGCCTCCCCACAGAGTCAGCATTCTCCAGAAGA...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCACTCTGTGGGGAGGCTCCAAACGATATTTTTCTaGAGATGGGTGTCCGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLSQLRLKCFHSVGRLQTIFF*RWVSVS Trigger: CGACACGGACACCCATCTGCAGAAAAATATCGTTTG...GAGCCTCCCCACAGAGTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATCTCTTCCTCCCTCTaGTGCAAGTTCCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGISSSL*CKFHSS Trigger: ACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGAGAT...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTCAGCTGCGCCTGAAGTaGTTCCACCTGCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YIKDKASRMVRLQSARAAQLRLK*FHLQEQ Trigger: CTGCTCCTGCAGGTGGAAGCACTTCAGGCGCAGCTG...AGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| 3UTR CAA 72 bp | TGGCCAGGTCCTGATCTCCATGGGTGTTGTTCATGGTaGCCTTGTAGAGCATTTGCTCCAGGTCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPGPDLHGCCSW*PCRAFAPGLAA Trigger: AGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGAGATCAGGACCTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCCATGAGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGATCTCTTCCTCCCTCTaGTGCAAGTTCCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLHEPLHLLSRKLCLLSQISSSL*CKFHSS Trigger: ACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGAGAT...CTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR GCA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTCATGCGACTGCAGCCTaGAGAGTCTTCTGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CTMGLWQSSCLRFPSPGIHATAA*RVFWRM Trigger: CATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATG...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | CGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCACTCTGTGGGGTTTTCTTCCACCTGTTaGTATCACCAAAGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLCLLSQLRLKCFHSVGFSSTC*YHQSQS Trigger: GCTCTGGCTTTGGTGATACCAACAGGTGGAAGAAAA...CCCCACAGAGTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| 3UTR CAA 72 bp | ATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTaGTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDATTLDNSRST*WAQVTLSQVSR Trigger: TCTGGAGACCTGAGACAAGGTCACCTGTGCCCACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| 3UTR CAA 72 bp | CTAGGGCTCGTCGATGCTCCAAGGCCTGATAGCGCTTaGTCATTATCTGTAAGCGCTTGCCCATCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLVDAPRPDSA*SLSVSACPSCW Trigger: CCAACAAGATGGGCAAGCGCTTACAGATAATGACAAAGCGCTATCAGGCCTTGGAGCATCGACGAGCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| 3UTR CAA 72 bp | TCTCGCAGCTTCTGTCGGAGAGACTTAATGTCCGTCTaGAAGCCTTCTACTTCTAGGGCTCGTCGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSFCRRDLMSV*KPSTSRARRCS Trigger: GGAGCATCGACGAGCCCTAGAAGTAGAAGGCTTCAAGACGGACATTAAGTCTCTCCGACAGAAGCTGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGCAGATCTTCATTCTCTaGCTCACAGTTAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGQIFIL*LTVSHL Trigger: AAGATGGCTAACTGTGAGTCAGAGAATGAAGATCTG...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCACATCTCTTCCTCCCTCTaGTGCAAGTTCCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSRKLCLLSQLRLKCFHISSSL*CKFHSS Trigger: ACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGAGAT...GTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGTCACTCAGAGCTTTCTaGAATTCTGCAATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGSLRAF*NSAISS Trigger: GGAAGAGATTGCAGAATTGCAGAAAGCTCTGAGTGA...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACTTGGATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTCACTCAGAGCTTTCTaGAATTCTGCAATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLDLLDSDPSVLHEPLHSLRAF*NSAISS Trigger: GGAAGAGATTGCAGAATTGCAGAAAGCTCTGAGTGA...GTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGATCCAAGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAATCTCTGTGTCCCTCTaGTGGCGCTCAGAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYIKDKASRMVRLQSARAISVSL*WRSEMP Trigger: GGGCATTTCTGAGCGCCACCAGAGGGACACAGAGAT...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTCGACTCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTCTCTGTCTTCCAGTTCTCTaGTTCTTAGTCGGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSTRIRLSSMSPSTCSLCLPVL*FLVGHF Trigger: AAAATGACCGACTAAGAATCAGAGAACTGGAAGACA...GAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGAGTCGAGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTAAGCAGTTCTTGGGTATaGTGGAGACTCTTGGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPWVCGNPPASDSQALGLSSSWV*WRLLVS Trigger: GCTAACCAAGAGTCTCCATCATACCCAAGAACTGCT...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCTCTTCCTCCCTCTGCTaGAAGTTCCACTCAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLLSRKLCLLSQLRLKCFSSSLC*KFHSSL Trigger: TAAACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGA...GAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGTCTTTCTTCTTACACTaGGCTCTATACTGCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGSFFLH*ALYCVI Trigger: GATTACGCAGTATAGAGCGCAGTGTAAGAAGAAAGA...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTATATGAGCTCTCCTGTTaGTGTCACGGACTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VPWVCGNPPASDSQALGLYELSC*CHGLHT Trigger: TGTGTGAAGTCCGTGACAGCAACAGGAGAGCTCATA...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAAAGGAGTCCATGGGTGTTGTTCATaGTTGCCTTGTAGAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTGDLVSGLQKPTLKGVHGCCS*LPCRAF Trigger: AAATGCTCTACAAGGCAACCATGAACAACACCCATG...GACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| 3UTR CAA 72 bp | TCCATGGGTGTTGTTCATGGTTGCCTTGTAGAGCATTaGCTCCAGGTCTCGCAGCTTCTGTCGGAGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SMGVVHGCLVEH*LQVSQLLSERL Trigger: AAGTCTCTCCGACAGAAGCTGCGAGACCTGGAGCAAATGCTCTACAAGGCAACCATGAACAACACCCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | CATGATTTTCTCTTGGTTTCTCTGGTGCTGAACTTGGATCTCCTCGACTCGGATTACTCCAGAAGCTCCTaGGAAGGGCAAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HDFLLVSLVLNLDLLDSDYSRSS*EGQRTA Trigger: GGCTGTCCTTTGCCCTTCTCAGGAGCTTCTGGAGTA...ATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGAAACCAAGAGAAAATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127146.8 ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCAGATCTTCATTCTCTaGCTCACAGTTAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLALSKALSALPAAPEVLQIFIL*LTVSHL Trigger: AAGATGGCTAACTGTGAGTCAGAGAATGAAGATCTG...AAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | TCGGATCCGTCTGTCCTCCATGAGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCAGATCTTCATTCTCTaGCTCACAGTTAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDPSVLHEPLHLLSRKLCQIFIL*LTVSHL Trigger: AAGATGGCTAACTGTGAGTCAGAGAATGAAGATCTG...ACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGATCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127146.8 ENSMUST00000136829.8 ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCACAGGTGACCTTGTCTCAGGTCTCCAGAAGCCAACCCTGAAAGGAGTCTGTCTTCCAGTTCTCTaGTTCTTAGTCGGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTGDLVSGLQKPTLKGVCLPVL*FLVGHF Trigger: AAAATGACCGACTAAGAATCAGAGAACTGGAAGACA...GACTCCTTTCAGGGTTGGCTTCTGGAGACCTGAGACAAGGTCACCTGTGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTTACTCCAGGATCTaGTTTGGAAGCAGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYIKDKASRMVRLQSARAAYSRI*FGSRRL Trigger: GAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGC...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CCA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTATTTTCTTCCACCTGTTaGTATCACCAAAGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPWVCGNPPASDSQALGLFSSTC*YHQSQS Trigger: GCTCTGGCTTTGGTGATACCAACAGGTGGAAGAAAA...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTCTCCCAGCTGCGCCTaGAGTGCTTCCACCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYSPSCA*SASTCR Trigger: CCTGCAGGTGGAAGCACTTCAGGCGCAGCTGGGAGA...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTTCCGTCTGTCCTCCATaGGCCCCTCCACTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCSVCPP*APPLAL Trigger: GAGAGCAAGTGGAGGGGCTCATGGAGGACAGACGGA...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGAAGTGCTTCCACTCTGTGGGGAGAGTTCTCTGCAATTCTaGTTCTTAGTCGGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KALSALPAAPEVLPLCGESSLQF*FLVGHF Trigger: AAAATGACCGACTAAGAATCAGAATTGCAGAGAACT...CTCCCCACAGAGTGGAAGCACTTCAGGCGCAGCTGGGAGAGCAGACAAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAAGTGCTTCCACTCTGTGGGGAGGCTCCTTATGAAAATAGGTCACTTCACATCTCTTCCTCCCTCTaGTGCAAGTTCCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEVLPLCGEAPYENRSLHISSSL*CKFHSS Trigger: ACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGAGAT...GTGAAGTGACCTATTTTCATAAGGAGCCTCCCCACAGAGTGGAAGCACTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR GCA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTTCACTCAGAGCTTTCTaGAATTCTGCAATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTMGLWQSSCLRFPSPGISLRAF*NSAISS Trigger: GGAAGAGATTGCAGAATTGCAGAAAGCTCTGAGTGA...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAACATGTTCCCTTTCCTaGAAGAGGCAGACCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QYIKDKASRMVRLQSARATCSLS*KRQTCI Trigger: TATGCAGGTCTGCCTCTTCCAGGAAAGGGAACATGT...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| 3UTR CAA 72 bp | CGCTTTGTCATTATCTGTAAGCGCTTGCCCATCTTGTaGGAGCGATCCTTGAAGATCTCTCTCCTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFVIICKRLPIL*ERSLKISLLTP Trigger: AGGAGTGAGGAGAGAGATCTTCAAGGATCGCTCCAACAAGATGGGCAAGCGCTTACAGATAATGACAAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCATCTCTTCCTCCCTCTaGTGCAAGTTCCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AYQYIKDKASRMVRLQSAISSSL*CKFHSS Trigger: ACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGAGAT...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTCACTGCGCTCTATACTaGGTAATCTTTGACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YIKDKASRMVRLQSARAAHCALY*VIFDIR Trigger: CCTGATGTCAAAGATTACGCAGTATAGAGCGCAGTG...AGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CCA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCACATGTTCCCTTTCCTaGAAGAGGCAGACCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AYQYIKDKASRMVRLQSATCSLS*KRQTCI Trigger: TATGCAGGTCTGCCTCTTCCAGGAAAGGGAACATGT...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGATCTCTGTGTCCCTCTaGTGGCGCTCAGAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWISVSL*WRSEMP Trigger: GGGCATTTCTGAGCGCCACCAGAGGGACACAGAGAT...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTAGAAATGCACTGTTCTTaGTACATGTTGGACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPWVCGNPPASDSQALGLEMHCS*YMLDSF Trigger: AAAGCTGTCCAACATGTACCAAGAACAGTGCATTTC...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTACTCCAGAAGCTCCTaGGAAGGGCAAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLYSRSS*EGQRTA Trigger: GGCTGTCCTTTGCCCTTCTCAGGAGCTTCTGGAGTA...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCTCTTCCTCCCTCTGCTaGAAGTTCCACTCAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AYQYIKDKASRMVRLQSASSSLC*KFHSSL Trigger: TAAACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGA...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCACTCTGTGGGGAGGCTCCTTATGAAAATAGGTCACTTCACCAGCATCTCACTCAGAGCTTTCTaGAATTCTGCAATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFHSVGRLLMKIGHFTSISLRAF*NSAISS Trigger: GGAAGAGATTGCAGAATTGCAGAAAGCTCTGAGTGA...GATGCTGGTGAAGTGACCTATTTTCATAAGGAGCCTCCCCACAGAGTGGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTAGCAGAAGGCTCACATaGGACTGCAGCCTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCSRRLT*DCSLQS Trigger: ACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCT...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| 3UTR CAA 72 bp | TCTGTGTCCCTCTGGTGGCGCTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGTCTTTTGCTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSLWWRSEMPS*SFILTCLLLTP Trigger: TGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGAGCGCCACCAGAGGGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTTACTCCAGAAGCTCCTaGGAAGGGCAAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSYSRSS*EGQRTA Trigger: GGCTGTCCTTTGCCCTTCTCAGGAGCTTCTGGAGTA...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCATCTTGGTTAGCTCCATaGTTTTCTCTTGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYIKDKASRMVRLQSARASWLAP*FSLGFS Trigger: AGAGAAACCAAGAGAAAATCATGGAGCTAACCAAGA...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATAGCAGAAGGCTCACATaGGACTGCAGCCTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYSRRLT*DCSLQS Trigger: ACTCTGCAGGCTGCAGTCGCATGTGAGCCTTCTGCT...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGCTCCAGGATCTGCTTTaGAAGCAGAAGGCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWLQDLL*KQKAHM Trigger: CATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAG...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| 3UTR CAA 72 bp | GCGCTCAGAAATGCCCTCCTTGTCCTTTATTCTTACTaGTCTTTTGCTTACTCCAGGATCTGCTTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRNALLVLYSY*SFAYSRICFGS Trigger: GCTTCCAAAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAAGAGCTAACAGATTCTaGATCTTTTTCTTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QYIKDKASRMVRLQSARARANRF*IFFLSS Trigger: GGAAGACAAGAAAAAGATTCAGAATCTGTTAGCTCT...TGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCATGCGACTGCAGCCTaGAGAGTCTTCTGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSHATAA*RVFWRM Trigger: CATTCTCCAGAAGACTCTGCAGGCTGCAGTCGCATG...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGGCTTACTCCAGGATCTaGTTTGGAAGCAGAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLAYSRI*FGSRRL Trigger: GAGCCTTCTGCTTCCAAAGCAGATCCTGGAGTAAGC...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | TATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTTTCTTACTTGTCTTTTaGTTACTCCAGGATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIKDKASRMVRLQSARAAFLLVF*LLQDLL Trigger: AAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAA...AGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR GCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGTATGAGCTCTCCTGTTaGTGTCACGGACTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWYELSC*CHGLHT Trigger: TGTGTGAAGTCCGTGACAGCAACAGGAGAGCTCATA...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGAGCTAACAGATTCTaGATCTTTTTCTTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AYQYIKDKASRMVRLQSARANRF*IFFLSS Trigger: GGAAGACAAGAAAAAGATTCAGAATCTGTTAGCTCT...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTTCCCCCTGTATCTTATaGGCTCTCCTGTTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSSPCIL*ALLLLS Trigger: TGACAGCAACAGGAGAGCTCATAAGATACAGGGGGA...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGCAAACGATATTTTTCTaGAGATGGGTGTCCGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWQTIFF*RWVSVS Trigger: CGACACGGACACCCATCTGCAGAAAAATATCGTTTG...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGGTTGTAGAAAGTCCTTaGTGCTCTCGTAGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWVVESP*CSRRAV Trigger: AACTGCTCTACGAGAGCACCAAGGACTTTCTACAAC...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTAGCAGTTCTTGGGTATaGTGGAGACTCTTGGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSSSSWV*WRLLVS Trigger: GCTAACCAAGAGTCTCCATCATACCCAAGAACTGCT...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTTCTTCCTCCCTCTGCTaGAAGTTCCACTCAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCSSSLC*KFHSSL Trigger: TAAACTTGAGTGGAACTTGCAGCAGAGGGAGGAAGA...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGGTAGAAAGTCCTTGGTaGTCTCGTAGAGCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLVESPW*SRRAVL Trigger: AAGAACTGCTCTACGAGAGCACCAAGGACTTTCTAC...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTACATGTTCCCTTTCCTaGAAGAGGCAGACCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSTCSLS*KRQTCI Trigger: TATGCAGGTCTGCCTCTTCCAGGAAAGGGAACATGT...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGTCTTGGTTAGCTCCATaGTTTTCTCTTGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWSWLAP*FSLGFS Trigger: AGAGAAACCAAGAGAAAATCATGGAGCTAACCAAGA...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTCACTCAGAGCTTTCTaGAATTCTGCAATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLSLRAF*NSAISS Trigger: GGAAGAGATTGCAGAATTGCAGAAAGCTCTGAGTGA...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATCACTGCGCTCTATACTaGGTAATCTTTGACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYHCALY*VIFDIR Trigger: CCTGATGTCAAAGATTACGCAGTATAGAGCGCAGTG...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGCCTCTTCTAGGGAAATaGACTGTTCTTGGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLPLLGK*TVLGTC Trigger: ACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGG...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTGTTGTAGAAAGTCCTTaGTGCTCTCGTAGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSVVESP*CSRRAV Trigger: AACTGCTCTACGAGAGCACCAAGGACTTTCTACAAC...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGGAAATGCACTGTTCTTaGTACATGTTGGACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWEMHCS*YMLDSF Trigger: AAAGCTGTCCAACATGTACCAAGAACAGTGCATTTC...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTCATGGGTGTTGTTCATaGTTGCCTTGTAGAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCHGCCS*LPCRAF Trigger: AAATGCTCTACAAGGCAACCATGAACAACACCCATG...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTTGTCTTCCAGTTCTCTaGTTCTTAGTCGGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCCLPVL*FLVGHF Trigger: AAAATGACCGACTAAGAATCAGAGAACTGGAAGACA...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGATACTGCGTAATCTTTaGCATCAGGTGATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLILRNL*HQVIFL Trigger: GAGAAAGATCACCTGATGTCAAAGATTACGCAGTAT...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTTGTCCTCTTTCTTCTTACACTGCGCTCTATACTGCGTAATCTTTGACAGTTCTCTGCAATTCTaGTTCTTAGTCGGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLSSFFLHCALYCVIFDSSLQF*FLVGHF Trigger: AAAATGACCGACTAAGAATCAGAATTGCAGAGAACT...GTCAAAGATTACGCAGTATAGAGCGCAGTGTAAGAAGAAAGAGGACAAACTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144131.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCCTCTTCTAGGGAAATaGACTGTTCTTGGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSPLLGK*TVLGTC Trigger: ACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGG...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR TCA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGAGAGCTAACAGATTCTaGATCTTTTTCTTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIFIKIDATTLDNSRSTLRANRF*IFFLSS Trigger: GGAAGACAAGAAAAAGATTCAGAATCTGTTAGCTCT...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 ENSMUST00000127146.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATATACTGCGTAATCTTTaGCATCAGGTGATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYILRNL*HQVIFL Trigger: GAGAAAGATCACCTGATGTCAAAGATTACGCAGTAT...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTCTTTCTTCTTACACTaGGCTCTATACTGCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYSFFLH*ALYCVI Trigger: GATTACGCAGTATAGAGCGCAGTGTAAGAAGAAAGA...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTGACTCTCGTGTAAAATaGGAACAACTTTTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCDSRVK*EQLFQV Trigger: AACTTGGAAAAGTTGTTCCCATTTTACACGAGAGTC...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| 3UTR CAA 72 bp | TCCTCTTCTAGGGAAATGCACTGTTCTTGGTACATGTaGGACAGCTTTTTCTCTTGTATTAGCTTATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSREMHCSWYM*DSFFSCISLSL Trigger: TAAGGATAAGCTAATACAAGAGAAAAAGCTGTCCAACATGTACCAAGAACAGTGCATTTCCCTAGAAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127146.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTTCTTACTTGTCTTTTaGTTACTCCAGGATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFVDRVSLNSLGWPRSHYFLLVF*LLQDLL Trigger: AAGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAA...ATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCCCTCCACTTGCTCTCTCGAAAGCTTTGTCTGCTCTCCCAGCTGCGCCTGATTTTCTTCCACCTGTaGGTATCACCAAAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPLHLLSRKLCLLSQLRLIFFHL*VSPKPE Trigger: CTCTGGCTTTGGTGATACCAACAGGTGGAAGAAAAT...CAGGCGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGCAAGTGGAGGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136829.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGAGGCCTGATAGCGCTTaGTCATTATCTGTAAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACTMGLWQSSCLRFPSPGRPDSA*SLSVSA Trigger: AGCGCTTACAGATAATGACAAAGCGCTATCAGGCCT...CCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTATCTCTGGTGCTGAACTaGGATCTCCTCGACTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPWVCGNPPASDSQALGLSLVLN*DLLDSD Trigger: ATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGA...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTAACTCCAGGATCTGCTTaGGAAGCAGAAGGCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: VPWVCGNPPASDSQALGLTPGSA*EAEGSH Trigger: ATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGT...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTACTCCAGGATCTGCTTaGGAAGCAGAAGGCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: CTMGLWQSSCLRFPSPGITPGSA*EAEGSH Trigger: ATGTGAGCCTTCTGCTTCCAAAGCAGATCCTGGAGT...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTAATTATCTGTAAGCGCTaGCCCATCTTGTTGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VPWVCGNPPASDSQALGLIICKR*PILLER Trigger: TCGCTCCAACAAGATGGGCAAGCGCTTACAGATAAT...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTCCAAACACTTTAGACTaGAGGTTCTTCAGTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CTMGLWQSSCLRFPSPGIPNTLD*RFFSSP Trigger: GGGGGAACTGAAGAACCTCAAGTCTAAAGTGTTTGG...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTACCAAACACTTTAGACTaGAGGTTCTTCAGTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VPWVCGNPPASDSQALGLPNTLD*RFFSSP Trigger: GGGGGAACTGAAGAACCTCAAGTCTAAAGTGTTTGG...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCTCTCTGGTGCTGAACTaGGATCTCCTCGACTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AYQYIKDKASRMVRLQSASLVLN*DLLDSD Trigger: ATCCGAGTCGAGGAGATCCAAGTTCAGCACCAGAGA...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CAA 90 bp | GTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTACTCCATGATTTTCTCTaGGTTTCTCTGGTGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VPWVCGNPPASDSQALGLLHDFL*VSLVLN Trigger: GTTCAGCACCAGAGAAACCAAGAGAAAATCATGGAG...TAATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGGCTCTCTCGAAAGCTTaGTCTGCTCTCCCAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWALSKA*SALPAA Trigger: CGCAGCTGGGAGAGCAGACAAAGCTTTCGAGAGAGC...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | TATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCAGGGCAGCTCTCGTAGAGCAGTTCTaGGGTATGATGGAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YIKDKASRMVRLQSARAALVEQF*GMMETL Trigger: AAGAGTCTCCATCATACCCAAGAACTGCTCTACGAG...AGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CAA 90 bp | TGTACCATGGGTTTGTGGCAATCCTCCTGCCTCAGATTCCCAAGCCCTGGGATTTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTMGLWQSSCLRFPSPGISEMPS*SFILTC Trigger: ACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGA...AATCCCAGGGCTTGGGAATCTGAGGCAGGAGGATTGCCACAAACCCATGGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCATTATCTGTAAGCGCTaGCCCATCTTGTTGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AYQYIKDKASRMVRLQSAIICKR*PILLER Trigger: TCGCTCCAACAAGATGGGCAAGCGCTTACAGATAAT...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CAA 90 bp | GCCTATCAGTATATAAAAGACAAGGCTAGCAGGATGGTGAGACTGCAGTCAGCCGACTTAATGTCCGTCTaGAAGCCTTCTACTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AYQYIKDKASRMVRLQSADLMSV*KPSTSR Trigger: CCTAGAAGTAGAAGGCTTCAAGACGGACATTAAGTC...GGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGTCTTTTATATACTGATAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CAA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGAGGCCTGATAGCGCTTaGTCATTATCTGTAAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TIFIKIDATTLDNSRSTLRPDSA*SLSVSA Trigger: AGCGCTTACAGATAATGACAAAGCGCTATCAGGCCT...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCTCGTAGAGCAGTTCTaGGGTATGATGGAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSLVEQF*GMMETL Trigger: AAGAGTCTCCATCATACCCAAGAACTGCTCTACGAG...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | ACCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGGACTTAATGTCCGTCTaGAAGCCTTCTACTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TIFIKIDATTLDNSRSTLDLMSV*KPSTSR Trigger: CCTAGAAGTAGAAGGCTTCAAGACGGACATTAAGTC...CAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTATTTTCTTCCACCTGTaGGTATCACCAAAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSIFFHL*VSPKPE Trigger: CTCTGGCTTTGGTGATACCAACAGGTGGAAGAAAAT...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032283.12 |
||
| CDS-3UTR CAA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGGTCCTTTATTCTTACTaGTCTTTTGCTTACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWVLYSY*SFAYSR Trigger: CCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGAC...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCACTATTGTAGATCAGGCTGGTCAGAAATGCCCTCCTaGTCCTTTATTCTTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLNSLGWPRSHYCRSGWSEMPS*SFILTC Trigger: ACAAGTAAGAATAAAGGACAAGGAGGGCATTTCTGA...CCAGCCTGATCTACAATAGTGACTTCTAGGCCATCCAAGGCTATTTAATGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTCTCCATGATTTTCTCTaGGTTTCTCTGGTGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSLHDFL*VSLVLN Trigger: GTTCAGCACCAGAGAAACCAAGAGAAAATCATGGAG...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTATTAAAATTGATGCCACTACTCTGGACAACTCCAGGTCCACTTTGTATTCTTACTTGTCTTTaGCTTACTCCAGGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLKLMPLLWTTPGPLCILTCL*LTPGSA Trigger: AGCAGATCCTGGAGTAAGCAAAAGACAAGTAAGAAT...ACAAAGTGGACCTGGAGTTGTCCAGAGTAGTGGCATCAATTTTAATAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTTGTTTGTAGACAGGGTTTCATTAAATAGCCTTGGATGGCCTAGAAGTGTCCTTTATTCTTACTaGTCTTTTGCTTACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCLFVDRVSLNSLGWPRSVLYSY*SFAYSR Trigger: CCTGGAGTAAGCAAAAGACAAGTAAGAATAAAGGAC...ACTTCTAGGCCATCCAAGGCTATTTAATGAAACCCTGTCTACAAACAAACAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032283.12 ENSMUST00000112703.8 |
||
| CDS CAA 90 bp | GGACAGCCAGACGATCCTCGACTGAAGGCAGGGGTGTTGACTCCATaGAGTCTGCCATTTTCTTCCACTTTCTGCAGATGGGTGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQPDDPRLKAGVLTP*SLPFSSTFCRWVSV Trigger: CACGGACACCCATCTGCAGAAAGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCCTTCAGTCGAGGATCGTCTGGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000112703.8 ENSMUST00000127146.8 ENSMUST00000144131.8 ENSMUST00000163827.8 |
||
| CDS CAA 72 bp | GGACAGCCAGACGATCCTCGACTGAAGGCAGGGGTGTaGACTCCATTGAGTCTGCCATTTTCTTCCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GQPDDPRLKAGV*TPLSLPFSSTC Trigger: ACAGGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCCTTCAGTCGAGGATCGTCTGGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000136829.8 ENSMUST00000146667.2 |
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| CDS CAA 90 bp | GGACAGCCAGACGATCCTCGACTGAAGGCAGGGGTGTTGACTCCATaGAGTCTGCCATTTTCTTCCACCTGTTGGTATCACCAAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQPDDPRLKAGVLTP*SLPFSSTCWYHQSQ Trigger: CTGGCTTTGGTGATACCAACAGGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCCTTCAGTCGAGGATCGTCTGGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000136829.8 ENSMUST00000146667.2 |
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| CDS CAA 72 bp | GGACAGCCAGACGATCCTCGACTGAAGGCAGGGGTGTaGACTCCATTGAGTCTGCCATTTTCTTCCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: GQPDDPRLKAGV*TPLSLPFSSTF Trigger: GAAAGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCCTTCAGTCGAGGATCGTCTGGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000112703.8 ENSMUST00000127146.8 ENSMUST00000144131.8 ENSMUST00000163827.8 |
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| CDS CAA 90 bp | GGCAGGGGTGTTGACTCCATTGAGTCTGCCATTTTCTTCCACCTGTaGGTATCACCAAAGCCAGAGCCAGCACCACGTTTAGAGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GRGVDSIESAIFFHL*VSPKPEPAPRLEAN Trigger: GTTTGCCTCTAAACGTGGTGCTGGCTCTGGCTTTGGTGATACCAACAGGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000136829.8 ENSMUST00000146667.2 |
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| CDS CAA 90 bp | AAGGGCAAAGGACAGCCAGACGATCCTCGACTGAAGGCAGGGGTGTaGACTCCATTGAGTCTGCCATTTTCTTCCACCTGTTGGTATCAC | + |
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Preference number: 6 (lower is better) Translates to: KGKGQPDDPRLKAGV*TPLSLPFSSTCWYH Trigger: GTGATACCAACAGGTGGAAGAAAATGGCAGACTCAATGGAGTCAACACCCCTGCCTTCAGTCGAGGATCGTCTGGCTGTCCTTTGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032283.12 ENSMUST00000136829.8 ENSMUST00000146667.2 |
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