Pregenerated sensors for CCDC74A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041617Ensembl transcript IDs: ENSMUST00000056962.11, ENSMUST00000182117.8, ENSMUST00000182344.8, ENSMUST00000182368.8, ENSMUST00000182671.8, ENSMUST00000182976.8, ENSMUST00000183279.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCCAGCTTGCTGCTGTGGGACAGGGCAGCACTGCTGAGTGACTaGTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGACTTCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LSSLLLWDRAALLSD*SSRSVFWRASDFSS Trigger: AGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCAGTCACTCAGCAGTGCTGCCCTGTCCCACAGCAGCAAGCTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR CCA 90 bp | TCTCTGCAGGACCCCAGGAGAAAGAGTAAAGTAGTGCTCAGCATATaGACGGCAGCCTGGCAGCTCCCTGCTCCCTCAACCCCATTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SLQDPRRKSKVVLSI*TAAWQLPAPSTPFP Trigger: TGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTGCCGTCCATATGCTGAGCACTACTTTACTCTTTCTCCTGGGGTCCTGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR CCA 90 bp | GCAGCCTGGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCAAGATaGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAG | + |
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Preference number: 1 (lower is better) Translates to: AAWQLPAPSTPFPSR*KQGSLLIPGWKPTK Trigger: CTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCTTGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR TCA 90 bp | CTCCCTCAACCCCATTTCCATCAAGATGGAAACAAGGTAGCCTGCTaGTCCCAGGGTGGAAACCTACTAAGGGTAAGCTTGGGGCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LPQPHFHQDGNKVAC*SQGGNLLRVSLGPL Trigger: CAAGGGCCCCAAGCTTACCCTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCTTGATGGAAATGGGGTTGAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR CCA 90 bp | CCCAGGAGAAAGAGTAAAGTAGTGCTCAGCATATGGACGGCAGCCTaGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCAAGATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PRRKSKVVLSIWTAA*QLPAPSTPFPSRWK Trigger: TTTCCATCTTGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTGCCGTCCATATGCTGAGCACTACTTTACTCTTTCTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGACAGGGCAGCACTGCTGAGTGACTGCTCTTCCAGGTCTGTCTTTTGGAGGATCATCTGGCTACACTaGCAGCCAGGCCTTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: WDRAALLSDCSSRSVFWRIIWLH*QPGLVL Trigger: CAAGACAAGGCCTGGCTGTCAGTGTAGCCAGATGAT...CCTCCAAAAGACAGACCTGGAAGAGCAGTCACTCAGCAGTGCTGCCCTGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAGGTGAAGTTAGCCAGGGGTCTCTGCAGGACCCCAGGAGAAAGAGTAAAGCCTTGAGAGTTGGCTaGGTGGGCCTGCTACATCAT | + |
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Preference number: 2 (lower is better) Translates to: PVGEVSQGSLQDPRRKSKALRVG*VGLLHH Trigger: ATGATGTAGCAGGCCCACCCAGCCAACTCTCAAGGC...TTTACTCTTTCTCCTGGGGTCCTGCAGAGACCCCTGGCTAACTTCACCTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CCA 90 bp | AGATGGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAGGGTAAGTCCAGCTTGCTGCTGTaGGACAGGGCAGCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RWKQGSLLIPGWKPTKGKSSLLL*DRAALL Trigger: CAGCAGTGCTGCCCTGTCCCACAGCAGCAAGCTGGA...CTTACCCTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCAAGATGGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAGCAAGCAGGCCTTACTTaGCCTGTCCCTGAGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSRWKQGSLLIPGWKPTKQAGLT*PVPEPQ Trigger: CTGGGGCTCAGGGACAGGCCAAGTAAGGCCTGCTTG...CTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCTTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR CAA 90 bp | GGGCTCAGAATTAAGCACTTCTTACTAAGGCCCTTGGAGGTGACCTaGGGAAACTGCATGGTGTCCTGGTCCTTTGGAGAACCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GLRIKHFLLRPLEVT*GNCMVSWSFGEPSP Trigger: TGGGCTGGGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| 3UTR CAA 90 bp | GCAGCAGGCATTGGGCTCAGAATTAAGCACTTCTTACTAAGGCCCTaGGAGGTGACCTTGGGAAACTGCATGGTGTCCTGGTCCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: AAGIGLRIKHFLLRP*EVTLGNCMVSWSFG Trigger: TCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCCAATGCCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCGCTCTGCAGCAGGCATTGGGCTCAGAATTAAGCACTTCTTACTAAGGCCCGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PRSAAGIGLRIKHFLLRPVTLGN*MVSWSF Trigger: AAAGGACCAGGACACCATGCAGTTTCCCAAGGTCAC...GGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCCAATGCCTGCTGCAGAGCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGGCATTGGGCTCAGAATTAAGCACTTCTTACTAAGGCCCTTGGAGGTGCCTTGGGAAACTGCATaGTGTCCTGGTCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AAGIGLRIKHFLLRPLEVPWETA*CPGPLE Trigger: CTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGG...CACCTCCAAGGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCCAATGCCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTCAGGATGCCTCGCTCTaGAGCAGGCATTGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: DNLLISESKCFYLSWVLSQDASL*SRHWAQ Trigger: CTGAGCCCAATGCCTGCTGCAGAGCGAGGCATCCTG...AGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCAAGATGGAAACAAGGTAGCCGCCCAGTCTCCTTCTTaGTTGTTTCTGTACATAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSSLLPQPHFHQDGNKVAAQSPS*LFLYIG Trigger: TCCTATGTACAGAAACAACCAAGAAGGAGACTGGGC...GGCTACCTTGTTTCCATCTTGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR GCA 90 bp | ATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGAGCAGCACAGAGCGGTaGAGGCGGCGGCTCTGTACT | + |
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Preference number: 2 (lower is better) Translates to: IEKIDNLLISESKCFYLSSSTER*RRRLCT Trigger: AGTACAGAGCCGCCGCCTGCACCGCTCTGTGCTGCT...CGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTCGGCTCTGTACTACTTaGAGCCTTTTCTGCCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DNLLISESKCFYLSWVLSRLCTT*SLFCRS Trigger: TGAGCGGCAGAAAAGGCTGCAAGTAGTACAGAGCCG...AGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IDNLLISESKCFYLSWVLVTLGN*MVSWSF Trigger: AAAGGACCAGGACACCATGCAGTTTCCCAAGGTCAC...CAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTTGTCTGTTTTGGAATTaGGTGTGGCTGCAAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: KIDNLLISESKCFYLSWVCLFWN*VWLQNR Trigger: CCTATTTTGCAGCCACACGCAATTCCAAAACAGACA...AACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATGTGCCTTTGCATAAATaGAGGAATAATAAAATCGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNVPLHK*RNNKIE Trigger: CTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR GCA 72 bp | GCTTGGGGCCCTTGGGGTGCGGGCCTGGTCCTCAGGTaGAAGCAGGCCTTACTTGGCCTGTCCCTGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: AWGPWGAGLVLR*KQALLGLSLSP Trigger: GGGGCTCAGGGACAGGCCAAGTAAGGCCTGCTTGCACCTGAGGACCAGGCCCGCACCCCAAGGGCCCCAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR GCA 72 bp | CGGGCTCCAGGGCGCCGGCTCAGCAGCACAGAGCGGTaGAGGCGGCGGCTCTGTACTACTTGCAGCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: RAPGRRLSSTER*RRRLCTTCSLF Trigger: GAAAAGGCTGCAAGTAGTACAGAGCCGCCGCCTGCACCGCTCTGTGCTGCTGAGCCGGCGCCCTGGAGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR GCA 72 bp | TTGCTGCTGTGGGACAGGGCAGCACTGCTGAGTGACTaGTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LLLWDRAALLSD*SSRSVFWRASD Trigger: GTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCAGTCACTCAGCAGTGCTGCCCTGTCCCACAGCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR GCA 72 bp | TTCTTACTAAGGCCCTTGGAGGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCTTTGGAGAACCCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FLLRPLEVTLGN*MVSWSFGEPSP Trigger: TGGGCTGGGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| 3UTR CCA 72 bp | AAGAGTAAAGTAGTGCTCAGCATATGGACGGCAGCCTaGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCA | + |
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Preference number: 3 (lower is better) Translates to: KSKVVLSIWTAA*QLPAPSTPFPS Trigger: TGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTGCCGTCCATATGCTGAGCACTACTTTACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGGACCCCAGGAGAAAGAGTAAAGTAGTGCTCAGCATATGGACGGCAGCCGGCCCAGTCTCCTTCTaGGTTGTTTCTGTACATAGG | + |
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Preference number: 3 (lower is better) Translates to: LQDPRRKSKVVLSIWTAAGPVSF*VVSVHR Trigger: CCTATGTACAGAAACAACCAAGAAGGAGACTGGGCC...GGCTGCCGTCCATATGCTGAGCACTACTTTACTCTTTCTCCTGGGGTCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CAA 90 bp | AGATGGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAGGGTAAGTTCAGCTCTTGTTTCTaGAAGGAGCTGGGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RWKQGSLLIPGWKPTKGKFSSCF*KELGWG Trigger: GCCCCAGCCCAGCTCCTTCAAGAAACAAGAGCTGAA...CTTACCCTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTGCCCTTGGAGGTGACCTaGGGAAACTGCATGGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: TISSFLRASAFICRGFCLPLEVT*GNCMVS Trigger: GGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGG...CAGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183279.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCAAGATGGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAGTTCCAGGTCTGTCTTTaGGAGGGCTTCAGACTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PSRWKQGSLLIPGWKPTKFQVCL*EGFRLQ Trigger: CTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAA...CTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCTTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR TCA 72 bp | CCCCATTTCCATCAAGATGGAAACAAGGTAGCCTGCTaGTCCCAGGGTGGAAACCTACTAAGGGTAAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: PHFHQDGNKVAC*SQGGNLLRVSL Trigger: CAAGCTTACCCTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCTTGATGGAAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR CCA 72 bp | GCACTGCTGAGTGACTGCTCTTCCAGGTCTGTCTTTTaGAGGGCTTCAGACTTCAGCTCTTGTTTCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: ALLSDCSSRSVF*RASDFSSCFLK Trigger: CTTCAAGAAACAAGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCAGTCACTCAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| 3UTR-3UTR CAA 90 bp | GACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTTGCCGCTCAGCAAAGTaGTTCTTCAGGCTCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: DNLLISESKCFYLSWVLSCRSAK*FFRLCF Trigger: GAAACAGAGCCTGAAGAACAACTTTGCTGAGCGGCA...AGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTGGCTCTGCAGCAGGCATaGGGCTCAGAATTAAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: TISSFLRASAFICRGFCLALQQA*GSELSL Trigger: CAAACTTAATTCTGAGCCCAATGCCTGCTGCAGAGC...CAGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182117.8 |
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| 3UTR CCA 72 bp | CTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTaGGTTCTGTCTGTTTTGGAATTGCGTGTGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLISESKCFYLS*VLSVLELRVAA Trigger: TGCAGCCACACGCAATTCCAAAACAGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| 3UTR CAA 72 bp | CAGGGTGGAAACCTACTAAGGGTAAGCTTGGGGCCCTaGGGGTGCGGGCCTGGTCCTCAGGTGCAAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QGGNLLRVSLGP*GCGPGPQVQAG Trigger: GCCTGCTTGCACCTGAGGACCAGGCCCGCACCCCAAGGGCCCCAAGCTTACCCTTAGTAGGTTTCCACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCAAGATGGAAACAAGACACCTCCCGCTGACTaGCCAGCCTGGGCCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QPGSSLLPQPHFHQDGNKTPPAD*PAWALA Trigger: AGCCAGGGCCCAGGCTGGGCAGTCAGCGGGAGGTGT...CTTGTTTCCATCTTGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS-3UTR CCA 90 bp | CCTGTAGGTGAAGTTAGCCAGGGGTCTCTGCAGGACCCCAGGAGAAAGAGTAAAGCTGACTGCCCAGCCTaGGCCCTGGCTCACCGGACA | + |
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Preference number: 4 (lower is better) Translates to: PVGEVSQGSLQDPRRKSKADCPA*ALAHRT Trigger: TGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTCAGC...TTTACTCTTTCTCCTGGGGTCCTGCAGAGACCCCTGGCTAACTTCACCTACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS-3UTR TCA 90 bp | AGATGGAAACAAGGTAGCCTGCTGATCCCAGGGTGGAAACCTACTAAGGGTAAGGGCAACACCTCCCGCTaGCTGCCCAGCCTGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RWKQGSLLIPGWKPTKGKGNTSR*LPSLGP Trigger: AGGGCCCAGGCTGGGCAGTCAGCGGGAGGTGTTGCC...CTTACCCTTAGTAGGTTTCCACCCTGGGATCAGCAGGCTACCTTGTTTCCATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCAGCGGACTTGCCAGAGTaGAGGCTCCATGTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: CSSGSVSMQAGCLALQQAADLPE*RLHVEM Trigger: CATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGC...TGCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR TCA 90 bp | TTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCGCGGACTTGCCAGAGTaGAGGCTCCATGTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: LFFRLCFNAGRMPRSAAGADLPE*RLHVEM Trigger: CATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGC...GCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | GCCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTGGTCCTTTGGAGAACCACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: ALGGDLGKLHGVLVLWRTTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...GGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCAGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CSSGSVSMQAGCLALQQAVTLGN*MVSWSR Trigger: CCGGGACCAGGACACCATGCAGTTTCCCAAGGTCAC...TGCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS-3UTR GCA 90 bp | GTTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: VVLQALFQCRQDASLCSRTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...CCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCATGCTGCTGTAGGAACTaGAGGCTCTTTTCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CSSGSVSMQAGCLALQQACCCRN*RLFSRS Trigger: GGACCTGGAAAAGAGCCTGCAGTTCCTACAGCAGCA...TGCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 |
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| CDS-3UTR GCA 90 bp | TTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCTGCTGCTGTAGGAACTaGAGGCTCTTTTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFRLCFNAGRMPRSAAGCCCRN*RLFSRS Trigger: GGACCTGGAAAAGAGCCTGCAGTTCCTACAGCAGCA...GCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 |
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| CDS-3UTR GCA 90 bp | GTTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGAATTGGAGGCGGACTTaGCAGAGTGAAGGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VVLQALFQCRQDASLCSRNWRRT*QSEGSM Trigger: CATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATT...CCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGCAGCTCCCTGCTCCCTCAACCCCATTTCCATCAAGATGGAAACAAGCAGGGCCACCCCCTTTaGGAAAGAGGGTTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QPGSSLLPQPHFHQDGNKQGHPL*ERGFST Trigger: AGTTGAAAACCCTCTTTCGCAAAGGGGGTGGCCCTG...CTTGTTTCCATCTTGATGGAAATGGGGTTGAGGGAGCAGGGAGCTGCCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| CDS-3UTR CCA 90 bp | TTACTAAGGCCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTGGTCCTTTGCAGCTTTGGGCCTTTaGTTCCCTTCCAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRPLEVTLGNCMVSWSFAALGL*FPSRSD Trigger: GTCACTCCTGGAAGGGAACCAAAGGCCCAAAGCTGC...AAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
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| CDS-3UTR TCA 90 bp | GTGACCTTGGGAAACTGCATGGTGTCCTGGTCCTTTGGAGAACCCAGCCCAGCCGAGGCTTCTCATTCATaGTTAGCTTGTAGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTLGNCMVSWSFGEPSPAEASHS*LACSGD Trigger: ATCTCCACTACAAGCTAATCATGAATGAGAAGCCTC...GGCTGGGCTGGGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGACTTCAGCTCTTGTTTCTTGGCGGACTTGCCAGAGTaGAGGCTCCATGTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSVFWRASDFSSCFLADLPE*RLHVEM Trigger: CATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGC...CAAGAAACAAGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGACTTCAGCTCTTGTTTCTTGACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSVFWRASDFSSCFLTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...CAAGAAACAAGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| CDS-3UTR GCA 90 bp | GGCATTGGGCTCAGAATTAAGCACTTCTTACTAAGGCCCTTGGAGGTGACCTTGAATTGGAGGCGGACTTaGCAGAGTGAAGGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GIGLRIKHFLLRPLEVTLNWRRT*QSEGSM Trigger: CATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATT...CAAGGTCACCTCCAAGGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCCAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183279.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGGAGGCTTCTCATTCATaGTTAGCTTGTAGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLQALFQCRQDASLCSREASHS*LACSGD Trigger: ATCTCCACTACAAGCTAATCATGAATGAGAAGCCTC...CCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCGAGGCTTCTCATTCATaGTTAGCTTGTAGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFFRLCFNAGRMPRSAAGEASHS*LACSGD Trigger: ATCTCCACTACAAGCTAATCATGAATGAGAAGCCTC...GCCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182117.8 ENSMUST00000182344.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTGCCTTGAGAGTTGGCTGGGTGGGCCTGCTACATCATCTGGCTACACTGAGGCTTCTCATTCATaGTTAGCTTGTAGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSCLESWLGGPATSSGYTEASHS*LACSGD Trigger: ATCTCCACTACAAGCTAATCATGAATGAGAAGCCTC...AGTGTAGCCAGATGATGTAGCAGGCCCACCCAGCCAACTCTCAAGGCAAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGACTTCAGCTCTTGTTTCTTGTGCTGCTGTAGGAACTaGAGGCTCTTTTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSVFWRASDFSSCFLCCCRN*RLFSRS Trigger: GGACCTGGAAAAGAGCCTGCAGTTCCTACAGCAGCA...CAAGAAACAAGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTCCAGGTCTGTCTTTTGGAGGGCTTCAGACTTCAGCTCTTGTTTCTTGAATTGGAGGCGGACTTaGCAGAGTGAAGGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSVFWRASDFSSCFLNWRRT*QSEGSM Trigger: CATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATT...CAAGAAACAAGAGCTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
||
| 3UTR CAA 72 bp | ATTGGGCTCAGAATTAAGCACTTCTTACTAAGGCCCTaGGAGGTGACCTTGGGAAACTGCATGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLRIKHFLLRP*EVTLGNCMVSW Trigger: CCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAAGTGCTTAATTCTGAGCCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
||
| CDS-3UTR CCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATACTGCTGCACTGTGGTaGGCTTGCGCAGGTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNTAALW*ACAGAG Trigger: CCCCGCACCTGCGCAAGCCCACCACAGTGCAGCAGT...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| 3UTR CAA 72 bp | ATTAAGCACTTCTTACTAAGGCCCTTGGAGGTGACCTaGGGAAACTGCATGGTGTCCTGGTCCTTTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKHFLLRPLEVT*GNCMVSWSFGE Trigger: TTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAAGTGCTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182976.8 ENSMUST00000183279.2 |
||
| 3UTR CAA 72 bp | TGTACTACTTGCAGCCTTTTCTGCCGCTCAGCAAAGTaGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CTTCSLFCRSAK*FFRLCFNAGRM Trigger: CATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAACTTTGCTGAGCGGCAGAAAAGGCTGCAAGTAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | GACAATCTCCTCATTTCTGAGAGCAAGTGCTTTTATCTGTCGTGGGTTCTGTCTTGCTGCTGTAGGAACTaGAGGCTCTTTTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNLLISESKCFYLSWVLSCCCRN*RLFSRS Trigger: GGACCTGGAAAAGAGCCTGCAGTTCCTACAGCAGCA...AGACAGAACCCACGACAGATAAAAGCACTTGCTCTCAGAAATGAGGAGATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182117.8 ENSMUST00000182671.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGAGGTGCCGTAGCTCCTaGGCCTGCAGGAGGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRNNKIEKIDNLLISESKRCRSS*ACRRLA Trigger: CGCCAACCTCCTGCAGGCCCAGGAGCTACGGCACCT...CTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCACTATCGAGAGAGGATaGCCGGGCTCCAGGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLTIERG*PGSRAP Trigger: CGGCGCCCTGGAGCCCGGCCATCCTCTCTCGATAGT...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATTCTTTGGCCTGTCCCTaGGCCCCAGGGACTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNSLACP*APGTLS Trigger: GGACAGAGTCCCTGGGGCTCAGGGACAGGCCAAAGA...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR GCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATCGTAGCTCCTGGGCCTaGAGGAGGTTGGCGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNRSSWA*RRLAFH Trigger: GTGGAACGCCAACCTCCTGCAGGCCCAGGAGCTACG...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCAGCAGCACAGAGCGGTaGAGGCGGCGGCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLSSTER*RRRLCT Trigger: AGTACAGAGCCGCCGCCTGCACCGCTCTGTGCTGCT...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATCACACTGCTGCACTGTaGTGGGCTTGCGCAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNHTAAL*WACAGA Trigger: CGCACCTGCGCAAGCCCACCACAGTGCAGCAGTGTG...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATGGCAGCACTGCTGAGTaGCTGCTCTTCCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNGSTAE*LLFQVC Trigger: ACAGACCTGGAAGAGCAGTCACTCAGCAGTGCTGCC...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR GCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCCAGGATGCCTCGCTCTaGAGCAGGCATTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLQDASL*SRHWAQ Trigger: CTGAGCCCAATGCCTGCTGCAGAGCGAGGCATCCTG...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CCA 90 bp | TGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTCCAGCTTGCTGCTGTaGGACAGGGCAGCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRNNKIEKIDNLLISESKSSLLL*DRAALL Trigger: CAGCAGTGCTGCCCTGTCCCACAGCAGCAAGCTGGA...CTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATCTGCATCCTCGTCTTTaGCCTGTCCCTGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNLHPRL*PVPEPQ Trigger: CTGGGGCTCAGGGACAGGCCAAAGACGAGGATGCAG...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR TCA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCGCGGACTTGCCAGAGTaGAGGCTCCATGTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RNNKIEKIDNLLISESKCADLPE*RLHVEM Trigger: CATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGC...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR TCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCGCGGACTTGCCAGAGTaGAGGCTCCATGTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLADLPE*RLHVEM Trigger: CATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGC...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR TCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCTCAGCTCTTGTTTCTTaGAGGAGCTGGGCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLSALVS*RSWAGA Trigger: GGCCCCAGCCCAGCTCCTTCAAGAAACAAGAGCTGA...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR GCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATTGCTGCTGTAGGAACTaGAGGCTCTTTTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNCCCRN*RLFSRS Trigger: GGACCTGGAAAAGAGCCTGCAGTTCCTACAGCAGCA...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 |
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| CDS-3UTR GCA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNNKIEKIDNLLISESKCTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCACTAGCGTCTCCGAGTaGTGCTGCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLTSVSE*CCCRNC Trigger: GCAGTTCCTACAGCAGCAGCACTCGGAGACGCTAGT...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATATGACCACCTCACACTaGTGCACTGTGGTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNMTTSH*CTVVGL Trigger: CAAGCCCACCACAGTGCAGCAGTGTGAGGTGGTCAT...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATGCAGCTTTGGGCCTTTaGTTCCCTTCCAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNAALGL*FPSRSD Trigger: GTCACTCCTGGAAGGGAACCAAAGGCCCAAAGCTGC...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000183279.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCGCAGCTTTGGGCCTTTaGTTCCCTTCCAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLAALGL*FPSRSD Trigger: GTCACTCCTGGAAGGGAACCAAAGGCCCAAAGCTGC...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000183279.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATCCTCAGCTGCAGCTTTaGGCCTTTGGTTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNPQLQL*AFGSLP Trigger: TGGAAGGGAACCAAAGGCCCAAAGCTGCAGCTGAGG...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR GCA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCAATTGGAGGCGGACTTaGCAGAGTGAAGGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RNNKIEKIDNLLISESKCNWRRT*QSEGSM Trigger: CATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATT...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGAATTGGAGGCGGACTTaGCAGAGTGAAGGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CRNNKIEKIDNLLISESKNWRRT*QSEGSM Trigger: CATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATT...CTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNVTLGN*MVSWSF Trigger: AAAGGACCAGGACACCATGCAGTTTCCCAAGGTCAC...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTTGCATAAATGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCCGGCTCTGTACTACTTaGAGCCTTTTCTGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLHKCRNNKIEKIDNLLRLCTT*SLFCRS Trigger: TGAGCGGCAGAAAAGGCTGCAAGTAGTACAGAGCCG...GAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCATTTATGCAAAGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
||
| CDS-3UTR CCA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCCCTTGGGAAACTGCATaGTGTCCTGGTCCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RNNKIEKIDNLLISESKCPWETA*CPGPLE Trigger: CTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGG...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR GCA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATGCACTGCTGAGTGACTaGTCTTCCAGGTCTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNALLSD*SSRSVF Trigger: AAAGACAGACCTGGAAGAGCAGTCACTCAGCAGTGC...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATGAGGCTTCTCATTCATaGTTAGCTTGTAGTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: STGRRVTFYYVPLHKCRNEASHS*LACSGD Trigger: ATCTCCACTACAAGCTAATCATGAATGAGAAGCCTC...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182671.8 ENSMUST00000183279.2 |
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| CDS-3UTR GCA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCTGTCTGTTTTGGAATTaGGTGTGGCTGCAAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: RNNKIEKIDNLLISESKCCLFWN*VWLQNR Trigger: CCTATTTTGCAGCCACACGCAATTCCAAAACAGACA...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS GCA 90 bp | TTCTGTGCTTCGCTGAACCCGAGCGGAGGCGGCTGCGTCCCCGCGTaGTGCAGGCCGGCGGGAGGGCGCGGGCGTAGGCGGGCCGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: FCASLNPSGGGCVPA*CRPAGGRGRRRAAP Trigger: GGGCGCGGCCCGCCTACGCCCGCGCCCTCCCGCCGGCCTGCAGCACGCGGGGACGCAGCCGCCTCCGCTCGGGTTCAGCGAAGCACAGAA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182368.8 ENSMUST00000182976.8 |
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| CDS GCA 90 bp | TCCAGGATCCGCTTCTGTGCTTCGCTGAACCCGAGCGGAGGCGGCTaGGTCCCCGCGTGCTGCAGGCCGGCGGGAGGGCGCGGGCGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SRIRFCASLNPSGGG*VPACCRPAGGRGRR Trigger: CCTACGCCCGCGCCCTCCCGCCGGCCTGCAGCACGCGGGGACGCAGCCGCCTCCGCTCGGGTTCAGCGAAGCACAGAAGCGGATCCTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182368.8 ENSMUST00000182976.8 |
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| CDS CCA 90 bp | CCTCCCGCTGACTGCCCAGCCTGGGCCCTGGCTCACCGGACATCGTaGAATTGGAGGCGGACTTGCCAGAGTGAAGGCTCCATGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PPADCPAWALAHRTS*NWRRTCQSEGSMWR Trigger: TCTCCACATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTCAGCGGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS CCA 90 bp | GCTGACTGCCCAGCCTGGGCCCTGGCTCACCGGACATCGTGGAATTaGAGGCGGACTTGCCAGAGTGAAGGCTCCATGTGGAGATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ADCPAWALAHRTSWN*RRTCQSEGSMWRCC Trigger: GCAGCATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS CCA 90 bp | TTCAACTCTAGGCAACACCTCCCGCTGACTGCCCAGCCTGGGCCCTaGCTCACCGGACATCGTGGAATTGGAGGCGGACTTGCCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: FNSRQHLPLTAQPGP*LTGHRGIGGGLARV Trigger: CACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTCAGCGGGAGGTGTTGCCTAGAGTTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS TCA 90 bp | CCCCTTTGCGAAAGAGGGTTTTCAACTCTAGGCAACACCTCCCGCTaGCTGCCCAGCCTGGGCCCTGGCTCACCGGACATCGTGGAATTG | + |
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Preference number: 5 (lower is better) Translates to: PLCERGFSTLGNTSR*LPSLGPGSPDIVEL Trigger: CAATTCCACGATGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTCAGCGGGAGGTGTTGCCTAGAGTTGAAAACCCTCTTTCGCAAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS CCA 90 bp | ACCTTGGGAAACTGCATGGTGTCCTGGTCCCGGACATCGTGGAATTaGAGGCGGACTTGCCAGAGTGAAGGCTCCATGTGGAGATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TLGNCMVSWSRTSWN*RRTCQSEGSMWRCC Trigger: GCAGCATCTCCACATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS CCA 90 bp | GAGGTGACCTTGGGAAACTGCATGGTGTCCTGGTCCCGGACATCGTaGAATTGGAGGCGGACTTGCCAGAGTGAAGGCTCCATGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: EVTLGNCMVSWSRTS*NWRRTCQSEGSMWR Trigger: TCTCCACATGGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS CCA 90 bp | TTACTAAGGCCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTaGTCCTTTGGAGAACCCAGCCCAGCCTCCTCAGCTGCAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLRPLEVTLGNCMVS*SFGEPSPASSAAAL Trigger: CAAAGCTGCAGCTGAGGAGGCTGGGCTGGGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CAA 90 bp | GTTGTTCTTCAGGCTCTGTTTCAATGCAGGCAGGATGCCTCGCTCTGCAGCAGGCCCTTGGAGGTGACCTaGGGAAACTGCATGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVLQALFQCRQDASLCSRPLEVT*GNCMVS Trigger: GGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGG...CCTGCTGCAGAGCGAGGCATCCTGCCTGCATTGAAACAGAGCCTGAAGAACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS CCA 90 bp | TTACTAAGGCCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTaGTCCCGGACATCGTGGAATTGGAGGCGGACTTGCCAGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: LLRPLEVTLGNCMVS*SRTSWNWRRTCQSE Trigger: TTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS-3UTR CAA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATCCCTTGGAGGTGACCTaGGGAAACTGCATGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: STGRRVTFYYVPLHKCRNPLEVT*GNCMVS Trigger: GGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGG...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CAA 90 bp | AGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTGCTTCAGCTCTTGTTTCTaGAAGGAGCTGGGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RNNKIEKIDNLLISESKCFSSCF*KELGWG Trigger: GCCCCAGCCCAGCTCCTTCAAGAAACAAGAGCTGAA...GCACTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CAA 90 bp | TCTACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATTGCCGCTCAGCAAAGTaGTTCTTCAGGCTCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: STGRRVTFYYVPLHKCRNCRSAK*FFRLCF Trigger: GAAACAGAGCCTGAAGAACAACTTTGCTGAGCGGCA...ATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CAA 90 bp | TGCAGGAATAATAAAATCGAGAAAATAGACAATCTCCTCATTTCTGAGAGCAAGTTCCAGGTCTGTCTTTaGGAGGGCTTCAGACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CRNNKIEKIDNLLISESKFQVCL*EGFRLQ Trigger: CTGAAGTCTGAAGCCCTCCAAAAGACAGACCTGGAA...CTTGCTCTCAGAAATGAGGAGATTGTCTATTTTCTCGATTTTATTATTCCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS-3UTR CAA 90 bp | ACAGGTAGGAGAGTAACATTCTATTATGTGCCTTTGCATAAATGCAGGAATAATTTCTTACTAAGGCCCTaGGAGGTGACCTTGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: TGRRVTFYYVPLHKCRNNFLLRP*EVTLGN Trigger: GTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAA...ATTATTCCTGCATTTATGCAAAGGCACATAATAGAATGTTACTCTCCTACCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS GCA 72 bp | CGCTTCTGTGCTTCGCTGAACCCGAGCGGAGGCGGCTaGGTCCCCGCGTGCTGCAGGCCGGCGGGAGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RFCASLNPSGGG*VPACCRPAGGR Trigger: GCGCCCTCCCGCCGGCCTGCAGCACGCGGGGACGCAGCCGCCTCCGCTCGGGTTCAGCGAAGCACAGAAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056962.11 ENSMUST00000182117.8 ENSMUST00000182368.8 ENSMUST00000182976.8 |
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| CDS CCA 72 bp | GACTGCCCAGCCTGGGCCCTGGCTCACCGGACATCGTaGAATTGGAGGCGGACTTGCCAGAGTGAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DCPAWALAHRTS*NWRRTCQSEGS Trigger: GGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGTGAGCCAGGGCCCAGGCTGGGCAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182368.8 |
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| CDS CCA 72 bp | CCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTaGTCCTTTGGAGAACCCAGCCCAGCCTCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLEVTLGNCMVS*SFGEPSPASSA Trigger: AGCTGAGGAGGCTGGGCTGGGTTCTCCAAAGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056962.11 |
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| CDS CCA 72 bp | CCCTTGGAGGTGACCTTGGGAAACTGCATGGTGTCCTaGTCCCGGACATCGTGGAATTGGAGGCGGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PLEVTLGNCMVS*SRTSWNWRRTC Trigger: GCAAGTCCGCCTCCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS CCA 72 bp | TTGGGAAACTGCATGGTGTCCTGGTCCCGGACATCGTaGAATTGGAGGCGGACTTGCCAGAGTGAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGNCMVSWSRTS*NWRRTCQSEGS Trigger: GGAGCCTTCACTCTGGCAAGTCCGCCTCCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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| CDS GCA 72 bp | TTCTTACTAAGGCCCTTGGAGGTGACCTTGGGAAACTaGATGGTGTCCTGGTCCCGGACATCGTGGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: FLLRPLEVTLGN*MVSWSRTSWNW Trigger: CCAATTCCACGATGTCCGGGACCAGGACACCATGCAGTTTCCCAAGGTCACCTCCAAGGGCCTTAGTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182344.8 |
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