Pregenerated sensors for CCDC71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049305Ensembl transcript IDs: ENSMUST00000061209.7, ENSMUST00000193170.2, ENSMUST00000193269.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCTaGGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: VTSPEVPRIREAAGS*ALHNALVTQTAPLF Trigger: AAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAGGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CCA 90 bp | TTCGCCTGGCTTGGTCTGGTGGCCCATGCCTTTAATTCCCGTGATTaGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCAGCCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: FAWLGLVAHAFNSRD*PEADRSLSLRPAWT Trigger: AGTCCAGGCTGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGCATGGGCCACCAGACCAAGCCAGGCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 90 bp | TTCTCCACCTCAGCACTACCTTCCAGCCTGAGCAGCTGCTTCCACTaGGGGCCCAGCTTCTCCAAAGCAGAAGCTACCAATGTCCAATGT | + |
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Preference number: 1 (lower is better) Translates to: FSTSALPSSLSSCFH*GPSFSKAEATNVQC Trigger: ACATTGGACATTGGTAGCTTCTGCTTTGGAGAAGCTGGGCCCTCAGTGGAAGCAGCTGCTCAGGCTGGAAGGTAGTGCTGAGGTGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR GCA 90 bp | GCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTaGAGGTTCTCCACCTCAGCACTACCTTCCAGCCTGAGCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: ADTDLKLSQIPKYKD*RFSTSALPSSLSSC Trigger: GCAGCTGCTCAGGCTGGAAGGTAGTGCTGAGGTGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 90 bp | CTCCCGCAAACCACCCCACCCAAATCCTCCGTTTCTGAAAGGATGTaGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LPQTTPPKSSVSERM*VTSPEVPRIREAAG Trigger: CCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCTTTCAGAAACGGAGGATTTGGGTGGGGTGGTTTGCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACCAAGTCACAGTGCACTaGGCCATGAGAACACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: YQGTLSKPAPRLLIASCHQVTVH*AMRTPL Trigger: GAGGGGTGTTCTCATGGCTCAGTGCACTGTGACTTG...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACCAAATCCTCCGTTTCTaGAAGGATGTTGGTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: YQGTLSKPAPRLLIASCHQILRF*KDVGDQ Trigger: CTGGTCACCAACATCCTTTCAGAAACGGAGGATTTG...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTACAAGTCACAGTGCACTaGGCCATGAGAACACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SVSCLLWESQKGLLGKQLQVTVH*AMRTPL Trigger: GAGGGGTGTTCTCATGGCTCAGTGCACTGTGACTTG...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAACGTGGACATACAATCTaGAGAACAAGTCACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VQCVRVTLGDMVRLDPGERGHTI*RTSHSA Trigger: TGCACTGTGACTTGTTCTTCAGATTGTATGTCCACG...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATAGCAGCTGCTTCCACTaGGGGCCCAGCTTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VSCLLWESQKGLLGKQLNSSCFH*GPSFSK Trigger: TTTGGAGAAGCTGGGCCCTCAGTGGAAGCAGCTGCT...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACTGGGACATTCGAGGAGAGGTAGTGGCTCTAACCCTCCCCTCAGGATCCACTACACAATGCACTaGTCACACAGACAGCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: SKLGHSRRGSGSNPPLRIHYTMH*SHRQLR Trigger: GCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTG...GATCCTGAGGGGAGGGTTAGAGCCACTACCTCTCCTCGAATGTCCCAGTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCACTGAGCACTACACAATaGACTGGTCACACAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: AFNSRDWPEADRSLSLRPLSTTQ*TGHTDS Trigger: GCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACTGGGACATTCGAGGAGAGGTAGTGGCTCTAACCCTCCCCTCAGGATCCTGAGCACTACACAATaGACTGGTCACACAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: SKLGHSRRGSGSNPPLRILSTTQ*TGHTDS Trigger: GCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG...GATCCTGAGGGGAGGGTTAGAGCCACTACCTCTCCTCGAATGTCCCAGTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCACAAATCCTCCGTTTCTaGAAGGATGTTGGTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: AFNSRDWPEADRSLSLRPQILRF*KDVGDQ Trigger: CTGGTCACCAACATCCTTTCAGAAACGGAGGATTTG...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGACTACAAAGTTAAGTTCTAGGACAGCTGGGGCTACACAGAGAAACCCGTGCCGGATTTCCCACTaGGCTGCAAACAATTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: AWTTKLSSRTAGATQRNPCRISH*AANNFE Trigger: TTCAAAATTGTTTGCAGCTCAGTGGGAAATCCGGCA...CGGGTTTCTCTGTGTAGCCCCAGCTGTCCTAGAACTTAACTTTGTAGTCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATTTAAATTGATGACCTaGTTCAAGCTACCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: AFNSRDWPEADRSLSLRPFKLMT*FKLPGH Trigger: GTGCCCTGGTAGCTTGAAGCAGGTCATCAATTTAAA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 90 bp | CCAGAACCCCGAGAACATCACTTTAATGTCACCCTATCATTTAAATaGATGACCTGCTTCAAGCTACCAGGGCACTCTCTCCAAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PEPREHHFNVTLSFK*MTCFKLPGHSLQAC Trigger: GCAGGCTTGGAGAGAGTGCCCTGGTAGCTTGAAGCAGGTCATCAATTTAAATGATAGGGTGACATTAAAGTGATGTTCTCGGGGTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTACACTACACAATGCACTaGTCACACAGACAGCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: RENALDSKEGFVVQIQSLHYTMH*SHRQLR Trigger: GCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTG...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACTGGGACATTCGAGGAGAGGTAGTGGCTCTAACCCTCCCCTCAGGATCAAGGAGACCGCAAGGTaGAAAGGTATAAAACATGAT | + |
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Preference number: 2 (lower is better) Translates to: SKLGHSRRGSGSNPPLRIKETAR*KGIKHD Trigger: ATCATGTTTTATACCTTTCCACCTTGCGGTCTCCTT...GATCCTGAGGGGAGGGTTAGAGCCACTACCTCTCCTCGAATGTCCCAGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATGCCGGATTTCCCACTaGGCTGCAAACAATTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: DSKEGFVVQIQSLASCHQCRISH*AANNFE Trigger: TTCAAAATTGTTTGCAGCTCAGTGGGAAATCCGGCA...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATAAGGAGACCGCAAGGTaGAAAGGTATAAAACATGAT | + |
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Preference number: 2 (lower is better) Translates to: VSCLLWESQKGLLGKQLNKETAR*KGIKHD Trigger: ATCATGTTTTATACCTTTCCACCTTGCGGTCTCCTT...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | CCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCTaGGCACTACACAATGCACTGGTCACACAGACAGCT | + |
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Preference number: 3 (lower is better) Translates to: PEVPRIREAAGS*ALHNALVTQTA Trigger: AGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAGGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | CCTCCCGCAAACCACCCCACCCAAATCCTCCGTTTCTaGAAGGATGTTGGTGACCAGTCCCGAGGTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PPANHPTQILRF*KDVGDQSRGPQ Trigger: CTGGGGACCTCGGGACTGGTCACCAACATCCTTTCAGAAACGGAGGATTTGGGTGGGGTGGTTTGCGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | ATTGCAGGTTCTCCACCTCAGCACTACCTTCCAGCCTaGGCAGCTGCTTCCACTGAGGGCCCAGCTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: IAGSPPQHYLPA*AAASTEGPASP Trigger: TGGAGAAGCTGGGCCCTCAGTGGAAGCAGCTGCTCAGGCTGGAAGGTAGTGCTGAGGTGGAGAACCTGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR GCA 72 bp | GATCCGGGAAGCAGCAGGGTCCTGAGCACTACACAATaGACTGGTCACACAGACAGCTCCGCTGTTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: DPGSSRVLSTTQ*TGHTDSSAVFP Trigger: TGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAGGACCCTGCTGCTTCCCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | GCGAGATCCCTGGAGATGGATACAGGTGTCTGCCTGTaGTCATGGATGCCAGATCCCTGGAGATGGATACAG | + |
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Preference number: 3 (lower is better) Translates to: ARSLEMDTGVCL*SWMPDPWRWIQ Trigger: CTGTATCCATCTCCAGGGATCTGGCATCCATGATCACAGGCAGACACCTGTATCCATCTCCAGGGATCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CCA 72 bp | GCCTCCGGAGAGCAACACCACAAAGACTTCTTTCCCTaGCCTAAAAACCTGCTTGGTGCCGGATTTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: ASGEQHHKDFFP*PKNLLGAGFPT Trigger: AGTGGGAAATCCGGCACCAAGCAGGTTTTTAGGCCAGGGAAAGAAGTCTTTGTGGTGTTGCTCTCCGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CCA 72 bp | CCAGAGGCAGACAGATCTCTGAGTCTGAGGCCAGCCTaGACTACAAAGTTAAGTTCTAGGACAGCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PEADRSLSLRPA*TTKLSSRTAGA Trigger: AGCCCCAGCTGTCCTAGAACTTAACTTTGTAGTCCAGGCTGGCCTCAGACTCAGAGATCTGTCTGCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CAA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGCACCAATTGGGAAAATaGAGGCTAGTCCCTGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQHQLGK*RLVPVK Trigger: CTTTACAGGGACTAGCCTCAATTTTCCCAATTGGTG...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR GCA 72 bp | AACACCACAAAGACTTCTTTCCCTGGCCTAAAAACCTaGTTGGTGCCGGATTTCCCACTGAGCTGCAAACAA | + |
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Preference number: 3 (lower is better) Translates to: NTTKTSFPGLKT*LVPDFPLSCKQ Trigger: TTGTTTGCAGCTCAGTGGGAAATCCGGCACCAAGCAGGTTTTTAGGCCAGGGAAAGAAGTCTTTGTGGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGTTTCTGAAAGGATGTaGGTGACCAGTCCCGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RENALDSKEGFVVQIQSLVSERM*VTSPEV Trigger: GACCTCGGGACTGGTCACCAACATCCTTTCAGAAAC...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACGCCTCTTGTCACCAATaGGGAAAATTGAGGCTAGTC | + |
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Preference number: 3 (lower is better) Translates to: GSHYVADTDLKLSQIPKYASCHQ*GKLRLV Trigger: GACTAGCCTCAATTTTCCCAATTGGTGACAAGAGGC...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | TTGGTGCCGGATTTCCCACTGAGCTGCAAACAATTTTaGATCAGGCCCATCTGGTTCAAAACTGGGACATTC | + |
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Preference number: 3 (lower is better) Translates to: LVPDFPLSCKQF*IRPIWFKTGTF Trigger: GAATGTCCCAGTTTTGAACCAGATGGGCCTGATTCAAAATTGTTTGCAGCTCAGTGGGAAATCCGGCACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CCA 72 bp | CTGGTTCCATCACCCGTTACCACAGAGAAAATGCTCTaGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVPSPVTTEKML*TVRKVLWSRFR Trigger: TCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCTGTGGTAACGGGTGATGGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CCA 72 bp | GACAAACAAAAGACAGGCAGAGAGGGTCTCACTATGTaGCTGATACTGACCTCAAACTCAGTCAAATCCCCA | + |
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Preference number: 3 (lower is better) Translates to: DKQKTGREGLTM*LILTSNSVKSP Trigger: TGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCCTCTCTGCCTGTCTTTTGTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAACCCTATCATTTAAATaGATGACCTGCTTCAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: SVSCLLWESQKGLLGKQLTLSFK*MTCFKL Trigger: TAGCTTGAAGCAGGTCATCAATTTAAATGATAGGGT...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGACTACAAAGTTAAGTTCTAGGACAGCTGGGGCTACACAGAGAAACCCGACCCTATCATTTAAATaGATGACCTGCTTCAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: AWTTKLSSRTAGATQRNPTLSFK*MTCFKL Trigger: TAGCTTGAAGCAGGTCATCAATTTAAATGATAGGGT...CGGGTTTCTCTGTGTAGCCCCAGCTGTCCTAGAACTTAACTTTGTAGTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR GCA 72 bp | CACTTTAATGTCACCCTATCATTTAAATTGATGACCTaGTTCAAGCTACCAGGGCACTCTCTCCAAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: HFNVTLSFKLMT*FKLPGHSLQAC Trigger: GCAGGCTTGGAGAGAGTGCCCTGGTAGCTTGAAGCAGGTCATCAATTTAAATGATAGGGTGACATTAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR TCA 72 bp | GGTATTTCACACGATTCTTTTGCTTATCAACATCACTaGAGTTCAAGATTCTCAACACCACCTTTTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: GISHDSFAYQHH*SSRFSTPPFLK Trigger: TTTGAGAAAAGGTGGTGTTGAGAATCTTGAACTTCAGTGATGTTGATAAGCAAAAGAATCGTGTGAAATACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061209.7 |
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| CDS-3UTR CCA 90 bp | AGGATGTTGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCTCATCTCGCAGACCCTaGAGGAAGGCCACGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RMLVTSPEVPRIREAAGSSSRRP*RKATSW Trigger: CCAGCTCGTGGCCTTCCTCCAGGGTCTGCGAGATGA...GGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | AGGATGTTGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCTGGCTGCCTTGGGCTTaGCCTGCTTTGCTTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RMLVTSPEVPRIREAAGSWLPWA*PALLWP Trigger: GGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCA...GGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAATGGGCGCCGTTGCTTTaGGTTCCAGCGCCTCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEWAPLL*VPAPRR Trigger: CCGACGAGGCGCTGGAACCCAAAGCAACGGCGCCCA...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | AGGATGTTGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCAGGTTAGTGGTGGCATaGTTGGCTAGGGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RMLVTSPEVPRIREAAGSRLVVA*LARAAV Trigger: CACAGCAGCCCTAGCCAAGCATGCCACCACTAACCT...GGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAACAGCGGCCTTGGCTTTaGCTCTGGCTGCCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEQRPWL*LWLPWA Trigger: AGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTG...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | AGGATGTTGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCCTTGAGTGGGACCAGTaGTTCAAGGACCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMLVTSPEVPRIREAAGSLEWDQ*FKDHRE Trigger: CTCTCTGTGGTCCTTGAAGCACTGGTCCCACTCAAG...GGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAAGCCTTGGGCTTGGCCTaGTTTGCTTTGGCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEALGLA*FALALT Trigger: GGTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGC...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAAGGCTTTGGCTCTGGCTaGCTTGGGCTTGGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEGFGSG*LGLGLL Trigger: AAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCC...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTCCCTGGTTCCATCATGGGCGCCGTTGCTTTaGGTTCCAGCGCCTCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRRKMEPVEMSQSLVPSWAPLL*VPAPRR Trigger: CCGACGAGGCGCTGGAACCCAAAGCAACGGCGCCCA...TGATGGAACCAGGGACTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAACCCTTGTGCTTGGTCTaGGCTGCTTTGGCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEPLCLV*AALALA Trigger: GGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGG...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACGGGCCTCTGTGGCACTaGGATCCTGGCTCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YQGTLSKPAPRLLIASCHGPLWH*DPGSWD Trigger: ATCCCATGAGCCAGGATCTCAGTGCCACAGAGGCCC...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGGCACAGGGAGCAAGGTaGTCCGGCCTGCAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGAQGAR*SGLQGL Trigger: CAGTCCCTGCAGGCCGGACCACCTTGCTCCCTGTGC...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGGGCTGGGTAGACGCCTaGATAGAGGTGGGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQGWVDA*IEVGRE Trigger: TTCCCTGCCCACCTCTATCCAGGCGTCTACCCAGCC...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTGGCTGCCTTGGGCTTaGCCTGCTTTGCTTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQWLPWA*PALLWP Trigger: GGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCA...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | ATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCCAGCGGCCTTGGCTTTaGCTCTGGCTGCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHWSHRQLRCFPKYCCKGQRPWL*LWLPWA Trigger: AGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTG...GCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAGCACAGGGAGCAAGGTaGTCCGGCCTGCAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSCLLWESQKGLLGKQLAQGAR*SGLQGL Trigger: CAGTCCCTGCAGGCCGGACCACCTTGCTCCCTGTGC...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTCCCTGGTTCCATCACAGCCTGCCAGACAGTaGCACAGGGAGCAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRRKMEPVEMSQSLVPSQPARQ*HREQGG Trigger: ACCACCTTGCTCCCTGTGCCACTGTCTGGCAGGCTG...TGATGGAACCAGGGACTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGAGAGAGCCGCATGGCTaGGTAGACGCCTGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQREPHG*VDAWIE Trigger: CTCTATCCAGGCGTCTACCCAGCCATGCGGCTCTCT...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | ATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCCCTTGGCTTTGGCTCTaGCTGCCTTGGGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MHWSHRQLRCFPKYCCKGPWLWL*LPWAWP Trigger: AGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGG...GCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATCCCTTGTGCTTGGTCTaGGCTGCTTTGGCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDPLCLV*AALALA Trigger: GGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGG...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | ACCACCCCACCCAAATCCTCCGTTTCTGAAAGGATGTaGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTPPKSSVSERM*VTSPEVPRIRE Trigger: TTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCTTTCAGAAACGGAGGATTTGGGTGGGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGGGCTTTGGCTCTGGCTaGCTTGGGCTTGGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGGFGSG*LGLGLL Trigger: AAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCC...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | ATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCGTGCTTGGTCTGGGCTaGTTTGGCCTTGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MHWSHRQLRCFPKYCCKGVLGLG*FGLGLD Trigger: ATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCAC...GCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATGTGCTTGGTCTGGGCTaGTTTGGCCTTGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDVLGLG*FGLGLD Trigger: ATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCAC...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCCACAGAGAGCCGCATaGCTGGGTAGACGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGPQRAA*LGRRLD Trigger: ATCCAGGCGTCTACCCAGCCATGCGGCTCTCTGTGG...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATTGCCGTGGAGATACGTaGCCACGAGTGCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDCRGDT*PRVHSF Trigger: AAAGCTGTGCACTCGTGGTCACGTATCTCCACGGCA...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATTGCTGGCACTCGACTaGTTCAGGGAGCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFNSRDWPEADRSLSLRPLLALD*FRELSS Trigger: GCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTGCCTTGGGCTTGGCCTaGTTTGCTTTGGCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSALGLA*FALALT Trigger: GGTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGC...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATTCGGGGCACACACCGTaGTCTCTTCTTAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDSGHTP*SLLRRK Trigger: CTTCCTCCTAAGAAGAGAGCACGGTGTGTGCCCCGA...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTCCACAGAGAGCCGCATaGCTGGGTAGACGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSPQRAA*LGRRLD Trigger: ATCCAGGCGTCTACCCAGCCATGCGGCTCTCTGTGG...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | CCCTGGAGATGGATACAGGGGTCTGTGAGCTGCCTTTaGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PWRWIQGSVSCL*WESQKGLLGKQ Trigger: CTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGACCCCTGTATCCATCTCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGACGTGGCAGGTGGGTTaGTGGTACGAGCTTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGTWQVG*WYELVA Trigger: AGCTACAAGCTCGTACCATCAACCCACCTGCCACGT...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | TCAAAACTGGGACATTCGAGGAGAGGTAGTGGCTCTAACCCTCCCCTCAGGATCGCTTTGATCAGGGTTTaGGATGCCTGGGCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKLGHSRRGSGSNPPLRIALIRV*DAWAWT Trigger: TGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGC...GATCCTGAGGGGAGGGTTAGAGCCACTACCTCTCCTCGAATGTCCCAGTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACATACGTGACCACGAGTaGACAGCTTTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YQGTLSKPAPRLLIASCHIRDHE*TAFSST Trigger: TGTGGAGGAGAAAGCTGTGCACTCGTGGTCACGTAT...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACTTTGGCTTTCCCTTGTaGTTGGTCTGGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YQGTLSKPAPRLLIASCHFGFPL*LVWAAL Trigger: CAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAA...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTCCCTGGTTCCATCACTTTCTTCCCTGCCGTaGAGATACGTGACCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRRKMEPVEMSQSLVPSLSSLP*RYVTTS Trigger: ACTCGTGGTCACGTATCTCCACGGCAGGGAAGAAAG...TGATGGAACCAGGGACTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACCGAAGAATGGTCGGTTaGAAGCCATCATCTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQGTLSKPAPRLLIASCHRRMVG*KPSSRR Trigger: TCTGCGAGATGATGGCTTCCAACCGACCATTCTTCG...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATCCTTGGCTTTGGCTCTaGCTGCCTTGGGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCLLWESQKGLLGKQLNPWLWL*LPWAWP Trigger: AGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGG...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTTGCCCTTCCAGTTCTaGTCTGAACCGATCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQLPFQF*SEPIPL Trigger: CAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAA...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAAGGGCCTCTGTGGCACTaGGATCCTGGCTCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKEGFVVQIQSLASCHQGPLWH*DPGSWD Trigger: ATCCCATGAGCCAGGATCTCAGTGCCACAGAGGCCC...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAACCGGCCTGCAGGGACTaGCACAGCAGTTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKEGFVVQIQSLASCHQPACRD*HSSFGK Trigger: CTTCCCAAAACTGCTGTGTCAGTCCCTGCAGGCCGG...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATATACGTGACCACGAGTaGACAGCTTTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDIRDHE*TAFSST Trigger: TGTGGAGGAGAAAGCTGTGCACTCGTGGTCACGTAT...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | GGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTCCCTGGTTCCATCAGATCAGGGTTTGAGATaGCTGGGCCTGGACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRRKMEPVEMSQSLVPSDQGLR*LGLDSF Trigger: AAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATC...TGATGGAACCAGGGACTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTTCGGGGCACACACCGTaGTCTCTTCTTAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSSGHTP*SLLRRK Trigger: CTTCCTCCTAAGAAGAGAGCACGGTGTGTGCCCCGA...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGGTGGCACTGAGATCCTaGCTCATGGGATTAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQVALRS*LMGLNT Trigger: TGTGTTTAATCCCATGAGCCAGGATCTCAGTGCCAC...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACTCATCTCGCAGACCCTaGAGGAAGGCCACGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHYVADTDLKLSQIPKYSSRRP*RKATSW Trigger: CCAGCTCGTGGCCTTCCTCCAGGGTCTGCGAGATGA...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGCTCCACTTCGAAGAATaGTCGGTTGGAAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQLHFEE*SVGSHH Trigger: ATGATGGCTTCCAACCGACCATTCTTCGAAGTGGAG...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGATCTCTCTCAACACATTCCCAGAAACCAGCACCTGATTTTCCCCATACAGCCTGCCAGACAGTaGCACAGGGAGCAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQDLSQHIPRNQHLIFPIQPARQ*HREQGG Trigger: ACCACCTTGCTCCCTGTGCCACTGTCTGGCAGGCTG...TATGGGGAAAATCAGGTGCTGGTTTCTGGGAATGTGTTGAGAGAGATCCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTCCCTGGTTCCATCACTGAACCGATCCCTTTaGCTTTCCCTTGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRRKMEPVEMSQSLVPSLNRSL*LSLVLG Trigger: ACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAG...TGATGGAACCAGGGACTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCGATTACCTTGTCTTTTaGCTTGTCCCTCACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MHWSHRQLRCFPKYCCKGDYLVF*LVPHHS Trigger: GCTGTGGTGAGGGACAAGGCAAAAGACAAGGTAATC...GCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACTGGGACATTCGAGGAGAGGTAGTGGCTCTAACCCTCCCCTCAGGATCGCTTTGGCCTTGGCCTaGATTACCTTGTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLGHSRRGSGSNPPLRIALALA*ITLSFA Trigger: GGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGC...GATCCTGAGGGGAGGGTTAGAGCCACTACCTCTCCTCGAATGTCCCAGTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATGCCGTGGAGATACGTaGCCACGAGTGCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSKEGFVVQIQSLASCHQCRGDT*PRVHSF Trigger: AAAGCTGTGCACTCGTGGTCACGTATCTCCACGGCA...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAAACGTGGCAGGTGGGTTaGTGGTACGAGCTTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKEGFVVQIQSLASCHQTWQVG*WYELVA Trigger: AGCTACAAGCTCGTACCATCAACCCACCTGCCACGT...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTACCGGCCTGCAGGGACTaGCACAGCAGTTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RENALDSKEGFVVQIQSLPACRD*HSSFGK Trigger: CTTCCCAAAACTGCTGTGTCAGTCCCTGCAGGCCGG...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAAGCTTTGATCAGGGTTTaGGATGCCTGGGCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSKEGFVVQIQSLASCHQALIRV*DAWAWT Trigger: TGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGC...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGGATTACCTTGTCTTTTaGCTTGTCCCTCACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGDYLVF*LVPHHS Trigger: GCTGTGGTGAGGGACAAGGCAAAAGACAAGGTAATC...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | AATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGGTGGCACTGAGATCCTaGCTCATGGGATTAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: NALVTQTAPLFSQVLLQGVALRS*LMGLNT Trigger: TGTGTTTAATCCCATGAGCCAGGATCTCAGTGCCAC...CCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTCGAAGAATGGTCGGTTaGAAGCCATCATCTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSRRMVG*KPSSRR Trigger: TCTGCGAGATGATGGCTTCCAACCGACCATTCTTCG...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCAGGCTGGGTAGACGCCTaGATAGAGGTGGGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPGWVDA*IEVGRE Trigger: TTCCCTGCCCACCTCTATCCAGGCGTCTACCCAGCC...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATTCCTGTCTACCTTTATaGTCTGGGACTTTCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHTDSSAVFPSTAARAWDSCLPL*SGTFEV Trigger: AACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGA...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACGCTTTGCTTTGGCCCTaGCCCTTACTGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHYVADTDLKLSQIPKYALLWP*PLLSWS Trigger: AGACCAAGACAGTAAGGGTCAGGGCCAAAGCAAAGC...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGATCTCTCTCAACACATTCCCAGAAACCAGCACCTGATTTTCCCCATACTTGAGTGGGACCAGTaGTTCAAGGACCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQDLSQHIPRNQHLIFPILEWDQ*FKDHRE Trigger: CTCTCTGTGGTCCTTGAAGCACTGGTCCCACTCAAG...TATGGGGAAAATCAGGTGCTGGTTTCTGGGAATGTGTTGAGAGAGATCCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATTTTGGCTTTCCCTTGTaGTTGGTCTGGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLLWESQKGLLGKQLNFGFPL*LVWAAL Trigger: CAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAA...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAAGAGAGCCGCATGGCTaGGTAGACGCCTGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RENALDSKEGFVVQIQSLREPHG*VDAWIE Trigger: CTCTATCCAGGCGTCTACCCAGCCATGCGGCTCTCT...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATTTGCCCTTCCAGTTCTaGTCTGAACCGATCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLLWESQKGLLGKQLNLPFQF*SEPIPL Trigger: CAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAA...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATCTACCTTTATGGTCTaGGACTTTCGAGGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFNSRDWPEADRSLSLRPSTFMV*DFRGFA Trigger: GGCAAAACCTCGAAAGTCCCAGACCATAAAGGTAGA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCAAGGTTAGTGGTGGCATaGTTGGCTAGGGCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPRLVVA*LARAAV Trigger: CACAGCAGCCCTAGCCAAGCATGCCACCACTAACCT...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGATCTCTCTCAACACATTCCCAGAAACCAGCACCTGATTTTCCCCATAGCTGTTTTTCCGGTTTaGCCTTCCAGTTCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQDLSQHIPRNQHLIFPIAVFPV*PSSSGL Trigger: CAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGC...TATGGGGAAAATCAGGTGCTGGTTTCTGGGAATGTGTTGAGAGAGATCCTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACGCTTTGGCCTTGGCCTaGATTACCTTGTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHYVADTDLKLSQIPKYALALA*ITLSFA Trigger: GGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGC...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTATCTACCTTTATGGTCTaGGACTTTCGAGGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSCLLWESQKGLLGKQLSTFMV*DFRGFA Trigger: GGCAAAACCTCGAAAGTCCCAGACCATAAAGGTAGA...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTATCCTGTCTACCTTTATaGTCTGGGACTTTCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSCLLWESQKGLLGKQLSCLPL*SGTFEV Trigger: AACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGA...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | GGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTaGTCACCAATTGGGAAAATTGAGGCTAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRFCGPDSEPSL*SPIGKIEASPC Trigger: ACAGGGACTAGCCTCAATTTTCCCAATTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCAGCTTTGCTTTGGCCCTaGCCCTTACTGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPALLWP*PLLSWS Trigger: AGACCAAGACAGTAAGGGTCAGGGCCAAAGCAAAGC...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR TCA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGGGGCTGGCTGTGCATaGACTATAACCATAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: RENALDSKEGFVVQIQSLGAGCA*TITIDI Trigger: GATGTCTATGGTTATAGTTCATGCACAGCCAGCCCC...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGATCAGGGTTTGAGATaGCTGGGCCTGGACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RENALDSKEGFVVQIQSLDQGLR*LGLDSF Trigger: AAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATC...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR GCA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCAGCTGTTTTTCCGGTTTaGCCTTCCAGTTCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPAVFPV*PSSSGL Trigger: CAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGC...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CCA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCACTGAACCGATCCCTTTaGCTTTCCCTTGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPLNRSL*LSLVLG Trigger: ACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAG...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | ACCACAAAGACTTCTTTCCCTGGCCTAAAAACCTGCTaGGTGCCGGATTTCCCACTGAGCTGCAAACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TTKTSFPGLKTC*VPDFPLSCKQF Trigger: AAATTGTTTGCAGCTCAGTGGGAAATCCGGCACCAAGCAGGTTTTTAGGCCAGGGAAAGAAGTCTTTGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | GTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATaGGGAAAATTGAGGCTAGTCCCTGTAAAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVQIQSLASCHQ*GKLRLVPVKQK Trigger: TTTCTGCTTTACAGGGACTAGCCTCAATTTTCCCAATTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| 3UTR CAA 72 bp | CGAGAACATCACTTTAATGTCACCCTATCATTTAAATaGATGACCTGCTTCAAGCTACCAGGGCACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REHHFNVTLSFK*MTCFKLPGHSL Trigger: GAGAGAGTGCCCTGGTAGCTTGAAGCAGGTCATCAATTTAAATGATAGGGTGACATTAAAGTGATGTTCTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 90 bp | TTGGGGCCCAAGGCAGAGCACCCTTTCCTTTGGGCGCCGTTGCTTTaGGTTCCAGCGCCTCGTCGGAGACCAGCCCCAGGGCCTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGPKAEHPFLWAPLL*VPAPRRRPAPGPLL Trigger: TAGCAAAGGCCCTGGGGCTGGTCTCCGACGAGGCGCTGGAACCCAAAGCAACGGCGCCCAAAGGAAAGGGTGCTCTGCCTTGGGCCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS-3UTR CAA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAAACAGCGGCCTTGGCTTaGGCTCTGGCTGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQCVRVTLGDMVRLDPGETAALA*ALAALG Trigger: GCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGT...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 90 bp | GCACTCGACTGCTTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCATaGTTGGCTAGGGCTGCTGTGGACCCTTTAGCCAGCCTGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALDCFRELSSRLVVA*LARAAVDPLASLPD Trigger: GTCTGGCAGGCTGGCTAAAGGGTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAACCTGCTGCTGAGCTCCCTGAAGCAGTCGAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 90 bp | CCACTTCGAAGAATGGTCGGTTGGAAGCCATCATCTCGCAGACCCTaGAGGAAGGCCACGAGCTGGGCCTCTGTGGCACTGAGATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLRRMVGWKPSSRRP*RKATSWASVALRSW Trigger: CCAGGATCTCAGTGCCACAGAGGCCCAGCTCGTGGCCTTCCTCCAGGGTCTGCGAGATGATGGCTTCCAACCGACCATTCTTCGAAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS GCA 90 bp | AGACGCCTGGATAGAGGTGGGCAGGGAAGCCTACTGTTGTACCACTaGTGTTGCTGGCACTCGACTGCTTCAGGGAGCTCAGCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRLDRGGQGSLLLYH*CCWHSTASGSSAAG Trigger: ACCTGCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGCCCACCTCTATCCAGGCGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | AGCCACACTGGCATGAGCGCGAGCAGCTTTGATCAGGGTTTGAGATaGCTGGGCCTGGACAGTTTTGGGGCCCAAGGCAGAGCACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SHTGMSASSFDQGLR*LGLDSFGAQGRAPF Trigger: AAAGGGTGCTCTGCCTTGGGCCCCAAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGCTGCTCGCGCTCATGCCAGTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | TTTTGCCTTGTCCCTCACCACAGCGGCCTTGGCTTTGGCTCTGGCTaGCTTGGGCTTGGCCTGCTTTGCTTTGGCCCTGACCCTTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLVPHHSGLGFGSG*LGLGLLCFGPDPYC Trigger: ACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGTGGTGAGGGACAAGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | CTTGAGTGGGACCAGTGCTTCAAGGACCACAGAGAGCCGCATGGCTaGGTAGACGCCTGGATAGAGGTGGGCAGGGAAGCCTACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LEWDQCFKDHREPHG*VDAWIEVGREAYCC Trigger: ACAACAGTAGGCTTCCCTGCCCACCTCTATCCAGGCGTCTACCCAGCCATGCGGCTCTCTGTGGTCCTTGAAGCACTGGTCCCACTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCAACAGCGGCCTTGGCTTaGGCTCTGGCTGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPTAALA*ALAALG Trigger: GCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGT...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | AGGATGTTGGTGACCAGTCCCGAGGTCCCCAGGATCCGGGAAGCAGCAGGGTCCTTGGCCTGGATTACCTaGTCTTTTGCCTTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RMLVTSPEVPRIREAAGSLAWIT*SFALSL Trigger: GAGGGACAAGGCAAAAGACAAGGTAATCCAGGCCAA...GGACCCTGCTGCTTCCCGGATCCTGGGGACCTCGGGACTGGTCACCAACATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS TCA 90 bp | AAGCAGGGCCTCTTCCAGGGCTTTCTTCCCTGCCGTGGAGATACGTaGCCACGAGTGCACAGCTTTCTCCTCCACAGGCTGCACTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KQGLFQGFLPCRGDT*PRVHSFLLHRLHYH Trigger: ATGGTAGTGCAGCCTGTGGAGGAGAAAGCTGTGCACTCGTGGTCACGTATCTCCACGGCAGGGAAGAAAGCCCTGGAAGAGGCCCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
||
| CDS TCA 90 bp | TCTTGGTCTGGGTTTGAGCCACACTGGCATGAGCGCGAGCAGCTTTaGTCAGGGTTTGAGATGCCTGGGCCTGGACAGTTTTGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSGFEPHWHEREQL*SGFEMPGPGQFWGP Trigger: TGGGCCCCAAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGCTGCTCGCGCTCATGCCAGTGTGGCTCAAACCCAGACCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | GCAGGGAAGCCTACTGTTGTACCACTGCTGTTGCTGGCACTCGACTaGTTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCATGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGKPTVVPLLLLALD*FRELSSRLVVACLA Trigger: AGCCAAGCATGCCACCACTAACCTGCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACTTAGTGGTGGCATGCTaGGCTAGGGCTGCTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YQGTLSKPAPRLLIASCHLVVAC*ARAAVD Trigger: GTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAA...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGCCAGCCCCAGGGCCTTaGCTAGTCAGATGTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQPAPGP*LVRCLR Trigger: CCTCAAACATCTGACTAGCAAAGGCCCTGGGGCTGG...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATGGGCCTGGACAGTTTaGGGGCCCAAGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPWAWTV*GPKAEH Trigger: GTGCTCTGCCTTGGGCCCCAAAACTGTCCAGGCCCA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | TACCAGGGCACTCTCTCCAAGCCTGCTCCTAGACTCCTGATAGCCTCTTGCCACACCTTGTCTTTTGCCTaGTCCCTCACCACAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YQGTLSKPAPRLLIASCHTLSFA*SLTTAA Trigger: GGCCGCTGTGGTGAGGGACAAGGCAAAAGACAAGGT...GTGGCAAGAGGCTATCAGGAGTCTAGGAGCAGGCTTGGAGAGAGTGCCCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGACATGGTGAGGCTGGACCCCGGAGAAAGATGGAGCCTGTGGAAATGAGTCAGTTGGTCTGGGCTGCTTaGGCCTTGGCCTGGATTACC | + |
|
Preference number: 5 (lower is better) Translates to: GHGEAGPRRKMEPVEMSQLVWAA*ALAWIT Trigger: GGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAA...CTGACTCATTTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | TTCAGGGGAGACTTTGCAAGTGACAGCTGCAGTGACTGTGCCCCGTaGTTAACGTCCAAGCAGGGAGTCTTGAGTGGGACCAGTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRGDFASDSCSDCAP*LTSKQGVLSGTSAS Trigger: TGAAGCACTGGTCCCACTCAAGACTCCCTGCTTGGACGTTAAGCACGGGGCACAGTCACTGCAGCTGTCACTTGCAAAGTCTCCCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | ATCCCTTTGGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTGGCCTTaGCCTGGATTACCTTGTCTTTTGCCTTGTCCCTCACCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPLAFPCAWSGLLWP*PGLPCLLPCPSPQR Trigger: CCGCTGTGGTGAGGGACAAGGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | GTTTTTCCGGTTTGCCCTTCCAGTTCTGGTCTGAACCGATCCCTTTaGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTGGCCTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFPVCPSSSGLNRSL*LSLVLGLGCFGLGL Trigger: CAGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | GCCCCACAGTCTCAGAGCTGTTTTTCCGGTTTGCCCTTCCAGTTCTaGTCTGAACCGATCCCTTTGGCTTTCCCTTGTGCTTGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: APQSQSCFSGLPFQF*SEPIPLAFPCAWSG Trigger: CCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGACTGTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | CACACTGTCGGACCTCGTCATCTGAGCACTTCCTGTCTACCTTTATaGTCTGGGACTTTCGAGGTTTTGCCGTTCCAGGCCCCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HTVGPRHLSTSCLPL*SGTFEVLPFQAPAT Trigger: TGTGGCTGGGGCCTGGAACGGCAAAACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGAAGTGCTCAGATGACGAGGTCCGACAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATTAGTGGTGGCATGCTaGGCTAGGGCTGCTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPLVVAC*ARAAVD Trigger: GTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTTTGGCTCTGGCTGCCTaGGGCTTGGCCTGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSLALAA*GLACFA Trigger: AGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAA...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAATGTGTACGGGTCACGTTAGGGGACATGGTGAGGCTGGACCCCGGAGAAGGATTACCTTGTCTTTaGCCTTGTCCCTCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VQCVRVTLGDMVRLDPGEGLPCL*PCPSPQ Trigger: CTGTGGTGAGGGACAAGGCAAAAGACAAGGTAATCC...TTCTCCGGGGTCCAGCCTCACCATGTCCCCTAACGTGACCCGTACACATTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCACCCTTTGGCTTTCCCTaGTGCTTGGTCTGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPPFGFP*CLVWAA Trigger: AGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGG...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | GGTCTGAACCGATCCCTTTGGCTTTCCCTTGTGCTTGGTCTGGGCTaGTTTGGCCTTGGCCTGGATTACCTTGTCTTTTGCCTTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLNRSLWLSLVLGLG*FGLGLDYLVFCLVP Trigger: AGGGACAAGGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | TGTCGGACCTCGTCATCTGAGCACTTCCTGTCTACCTTTATGGTCTaGGACTTTCGAGGTTTTGCCGTTCCAGGCCCCAGCCACACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CRTSSSEHFLSTFMV*DFRGFAVPGPSHTL Trigger: TAAGGTGTGGCTGGGGCCTGGAACGGCAAAACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGAAGTGCTCAGATGACGAGGTCCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATCCAAGCAGGGAGTCTaGAGTGGGACCAGTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPSKQGV*SGTSAS Trigger: TGAAGCACTGGTCCCACTCAAGACTCCCTGCTTGGA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTGGGGTGCTTTGGACTTaGGGTTCCCCGAAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSGVLWT*GSPKLS Trigger: GGAAAGCTTCGGGGAACCCAAAGTCCAAAGCACCCC...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATGGGCCTGGACAGTTTaGGGGCCCAAGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DSKEGFVVQIQSLASCHQWAWTV*GPKAEH Trigger: GTGCTCTGCCTTGGGCCCCAAAACTGTCCAGGCCCA...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCCGTGATTGGCCAGAGGCAGACAGATCTCTGAGTCTGAGGCCATGTCTTGGTCTGGGTTaGAGCCACACTGGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFNSRDWPEADRSLSLRPCLGLG*SHTGMS Trigger: GCTCATGCCAGTGTGGCTCAAACCCAGACCAAGACA...TGGCCTCAGACTCAGAGATCTGTCTGCCTCTGGCCAATCACGGGAATTAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS TCA 90 bp | ACAGTCTCAGAGCTGTTTTTCCGGTTTGCCCTTCCAGTTCTGGTCTaGACCGATCCCTTTGGCTTTCCCTTGTGCTTGGTCTGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSELFFRFALPVLV*TDPFGFPLCLVWAA Trigger: AGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS GCA 90 bp | CTTCTTCCTCTTCCGCCCCACAGTCTCAGAGCTGTTTTTCCGGTTTaGCCTTCCAGTTCTGGTCTGAACCGATCCCTTTGGCTTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLPPHSLRAVFPV*PSSSGLNRSLWLSL Trigger: AAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGACTGTGGGGCGGAAGAGGAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATGGGGTGCTTTGGACTTaGGGTTCCCCGAAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSCLLWESQKGLLGKQLNGVLWT*GSPKLS Trigger: GGAAAGCTTCGGGGAACCCAAAGTCCAAAGCACCCC...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGGACTACAAAGTTAAGTTCTAGGACAGCTGGGGCTACACAGAGAAACCCGTTGGCCTGCTTTGCTTaGGCCCTGACCCTTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWTTKLSSRTAGATQRNPLACFA*ALTLTV Trigger: GACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCCAA...CGGGTTTCTCTGTGTAGCCCCAGCTGTCCTAGAACTTAACTTTGTAGTCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCACTACACAATGCACTGGTCACACAGACAGCTCCGCTGTTTTCCCAAGTTGGGCTGCTTTGGCCTaGGCCTGGATTACCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTTQCTGHTDSSAVFPSWAALA*AWITLS Trigger: AGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCCCA...ACTTGGGAAAACAGCGGAGCTGTCTGTGTGACCAGTGCATTGTGTAGTGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS TCA 90 bp | ATTCACACGGAGGATCTGCTGGGCACACTGTCGGACCTCGTCATCTaGGCACTTCCTGTCTACCTTTATGGTCTGGGACTTTCGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHTEDLLGTLSDLVI*ALPVYLYGLGLSRF Trigger: AAACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGAAGTGCTCAGATGACGAGGTCCGACAGTGTGCCCAGCAGATCCTCCGTGTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTATCGAAGAATGGTCGGTaGGAAGCCATCATCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSCLLWESQKGLLGKQLSKNGR*EAIISQ Trigger: CTGCGAGATGATGGCTTCCAACCGACCATTCTTCGA...TAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGATCTCTCTCAACACATTCCCAGAAACCAGCACCTGATTTTCCCCATACCAGCCCCAGGGCCTTaGCTAGTCAGATGTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQDLSQHIPRNQHLIFPIPAPGP*LVRCLR Trigger: CCTCAAACATCTGACTAGCAAAGGCCCTGGGGCTGG...TATGGGGAAAATCAGGTGCTGGTTTCTGGGAATGTGTTGAGAGAGATCCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACACCTTGTCTTTTGCCTaGTCCCTCACCACAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHYVADTDLKLSQIPKYTLSFA*SLTTAA Trigger: GGCCGCTGTGGTGAGGGACAAGGCAAAAGACAAGGT...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATTGGTCTGGGCTGCTTaGGCCTTGGCCTGGATTACC | + |
|
Preference number: 5 (lower is better) Translates to: DSKEGFVVQIQSLASCHQLVWAA*ALAWIT Trigger: GGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAA...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGATCTCTCTCAACACATTCCCAGAAACCAGCACCTGATTTTCCCCATACCCTTTGGCTTTCCCTaGTGCTTGGTCTGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQDLSQHIPRNQHLIFPIPFGFP*CLVWAA Trigger: AGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGG...TATGGGGAAAATCAGGTGCTGGTTTCTGGGAATGTGTTGAGAGAGATCCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 90 bp | TGGCTGTGCATGAACTATAACCATAGACATCTCCACTTCGAAGAATaGTCGGTTGGAAGCCATCATCTCGCAGACCCTGGAGGAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WLCMNYNHRHLHFEE*SVGSHHLADPGGRP Trigger: TGGCCTTCCTCCAGGGTCTGCGAGATGATGGCTTCCAACCGACCATTCTTCGAAGTGGAGATGTCTATGGTTATAGTTCATGCACAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCTTTTGTGGGAGTCGCAAAAGGGTCTTCTGGGAAAGCAGCTAAATCTTTCAGGGGAGACTTaGCAAGTGACAGCTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSCLLWESQKGLLGKQLNLSGET*QVTAAV Trigger: CACTGCAGCTGTCACTTGCAAAGTCTCCCCTGAAAG...ATTTAGCTGCTTTCCCAGAAGACCCTTTTGCGACTCCCACAAAAGGCAGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGTCACACAGACAGCTCCGCTGTTTTCCCAAGTACTGCTGCAAGGGCTTGGGATTTGCTAGTCAGATGTTaGAGGCCCTTGCTTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GHTDSSAVFPSTAARAWDLLVRC*RPLLVI Trigger: AATCACAAGCAAGGGCCTCAAACATCTGACTAGCAA...ATCCCAAGCCCTTGCAGCAGTACTTGGGAAAACAGCGGAGCTGTCTGTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACTGTCTTGGTCTGGGTTaGAGCCACACTGGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSHYVADTDLKLSQIPKYCLGLG*SHTGMS Trigger: GCTCATGCCAGTGTGGCTCAAACCCAGACCAAGACA...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCATTGGCTCTGGCTGCCTaGGGCTTGGCCTGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPLALAA*GLACFA Trigger: AGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAA...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCACTATGTGGCTGATACTGACCTCAAACTCAGTCAAATCCCCAAGTACTGGGCTGCTTTGGCCTaGGCCTGGATTACCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSHYVADTDLKLSQIPKYWAALA*AWITLS Trigger: AGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCCCA...GTACTTGGGGATTTGACTGAGTTTGAGGTCAGTATCAGCCACATAGTGAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCATTGGCCTGCTTTGCTTaGGCCCTGACCCTTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPLACFA*ALTLTV Trigger: GACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCCAA...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAATGCTCTGGACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTATCGAAGAATGGTCGGTaGGAAGCCATCATCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RENALDSKEGFVVQIQSLSKNGR*EAIISQ Trigger: CTGCGAGATGATGGCTTCCAACCGACCATTCTTCGA...TAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTCCAGAGCATTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGACCTCAAACTCAGTCAAATCCCCAAGTACAAGGATTGCAGGTTCTCCACTTTCAGGGGAGACTTaGCAAGTGACAGCTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILTSNSVKSPSTRIAGSPLSGET*QVTAAV Trigger: CACTGCAGCTGTCACTTGCAAAGTCTCCCCTGAAAG...TGGAGAACCTGCAATCCTTGTACTTGGGGATTTGACTGAGTTTGAGGTCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTAAGGAAGGTTTTGTGGTCCAGATTCAGAGCCTAGCCTCTTGTCACCAATTGCTAGTCAGATGTTaGAGGCCCTTGCTTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: DSKEGFVVQIQSLASCHQLLVRC*RPLLVI Trigger: AATCACAAGCAAGGGCCTCAAACATCTGACTAGCAA...TTGGTGACAAGAGGCTAGGCTCTGAATCTGGACCACAAAACCTTCCTTACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CCA 72 bp | AAGGCAGAGCACCCTTTCCTTTGGGCGCCGTTGCTTTaGGTTCCAGCGCCTCGTCGGAGACCAGCCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KAEHPFLWAPLL*VPAPRRRPAPG Trigger: CCCTGGGGCTGGTCTCCGACGAGGCGCTGGAACCCAAAGCAACGGCGCCCAAAGGAAAGGGTGCTCTGCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
||
| CDS CAA 90 bp | TTTGGGGCCCAAGGCAGAGCACCCTTTCCTTTGGGCGCCGTTGCTTaGGGTTCCAGCGCCTCGTCGGAGACCAGCCCCAGGGCCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGAQGRAPFPLGAVA*GSSASSETSPRAFA Trigger: AGCAAAGGCCCTGGGGCTGGTCTCCGACGAGGCGCTGGAACCCAAAGCAACGGCGCCCAAAGGAAAGGGTGCTCTGCCTTGGGCCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | GTCCCTCACCACAGCGGCCTTGGCTTTGGCTCTGGCTaGCTTGGGCTTGGCCTGCTTTGCTTTGGCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: VPHHSGLGFGSG*LGLGLLCFGPD Trigger: GTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGTGGTGAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | GTGGGACCAGTGCTTCAAGGACCACAGAGAGCCGCATaGCTGGGTAGACGCCTGGATAGAGGTGGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VGPVLQGPQRAA*LGRRLDRGGQG Trigger: TCCCTGCCCACCTCTATCCAGGCGTCTACCCAGCCATGCGGCTCTCTGTGGTCCTTGAAGCACTGGTCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | TCCCTCACCACAGCGGCCTTGGCTTTGGCTCTGGCTGCCTTGGGCTaGGCCTGCTTTGCTTTGGCCCTGACCCTTACTGTCTTGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLTTAALALALAALG*ACFALALTLTVLVW Trigger: CCAGACCAAGACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGTGGTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | GCCTTGTCCCTCACCACAGCGGCCTTGGCTTTGGCTCTGGCTGCCTaGGGCTTGGCCTGCTTTGCTTTGGCCCTGACCCTTACTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALSLTTAALALALAA*GLACFALALTLTVL Trigger: CAAGACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGTGGTGAGGGACAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | CCCCAGCCACACCTTAGGAGGTCGGGGCACACACCGTaGTCTCTTCTTAGGAGGAAGACCCTTGGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PQPHLRRSGHTP*SLLRRKTLGLL Trigger: GAGGAGACCAAGGGTCTTCCTCCTAAGAAGAGAGCACGGTGTGTGCCCCGACCTCCTAAGGTGTGGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | AGAATGGTCGGTTGGAAGCCATCATCTCGCAGACCCTaGAGGAAGGCCACGAGCTGGGCCTCTGTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: RMVGWKPSSRRP*RKATSWASVAL Trigger: CAGTGCCACAGAGGCCCAGCTCGTGGCCTTCCTCCAGGGTCTGCGAGATGATGGCTTCCAACCGACCATTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS CAA 90 bp | CTCGACTGCTTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCATGCTaGGCTAGGGCTGCTGTGGACCCTTTAGCCAGCCTGCCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: LDCFRELSSRLVVAC*ARAAVDPLASLPDS Trigger: ACTGTCTGGCAGGCTGGCTAAAGGGTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAACCTGCTGCTGAGCTCCCTGAAGCAGTCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | TGCTTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCATaGTTGGCTAGGGCTGCTGTGGACCCTTTAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFRELSSRLVVA*LARAAVDPLAS Trigger: GCTGGCTAAAGGGTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAACCTGCTGCTGAGCTCCCTGAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | GGTGGGCAGGGAAGCCTACTGTTGTACCACTGCTGTTaGTGGCACTCGACTGCTTCAGGGAGCTCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GGQGSLLLYHCC*WHSTASGSSAA Trigger: TGCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | GGCATGAGCGCGAGCAGCTTTGATCAGGGTTTGAGATaGCTGGGCCTGGACAGTTTTGGGGCCCAAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GMSASSFDQGLR*LGLDSFGAQGR Trigger: TCTGCCTTGGGCCCCAAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGCTGCTCGCGCTCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | GGGCAGGGAAGCCTACTGTTGTACCACTGCTGTTGCTaGCACTCGACTGCTTCAGGGAGCTCAGCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GQGSLLLYHCCC*HSTASGSSAAG Trigger: ACCTGCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | CTTTTGCCTTGTCCCTCACCACAGCGGCCTTGGCTTTaGCTCTGGCTGCCTTGGGCTTGGCCTGCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLPCPSPQRPWL*LWLPWAWPALL Trigger: AAGCAAAGCAGGCCAAGCCCAAGGCAGCCAGAGCCAAAGCCAAGGCCGCTGTGGTGAGGGACAAGGCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | TTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCATGCTaGGCTAGGGCTGCTGTGGACCCTTTAGCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FRELSSRLVVAC*ARAAVDPLASL Trigger: CAGGCTGGCTAAAGGGTCCACAGCAGCCCTAGCCAAGCATGCCACCACTAACCTGCTGCTGAGCTCCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | AGGTGGGCAGGGAAGCCTACTGTTGTACCACTGCTGTaGCTGGCACTCGACTGCTTCAGGGAGCTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RWAGKPTVVPLL*LALDCFRELSS Trigger: GCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGCCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | GGCACACACCGTGCTCTCTTCTTAGGAGGAAGACCCTaGGTCTCCTCGGCCTTCTTCCTCTTCCGCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: GTHRALFLGGRP*VSSAFFLFRPT Trigger: TGTGGGGCGGAAGAGGAAGAAGGCCGAGGAGACCAAGGGTCTTCCTCCTAAGAAGAGAGCACGGTGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | AGCTGCAGTGACTGTGCCCCGTGCTTAACGTCCAAGCAGGGAGTCTaGAGTGGGACCAGTGCTTCAAGGACCACAGAGAGCCGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSDCAPCLTSKQGV*SGTSASRTTESRMA Trigger: AGCCATGCGGCTCTCTGTGGTCCTTGAAGCACTGGTCCCACTCAAGACTCCCTGCTTGGACGTTAAGCACGGGGCACAGTCACTGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | GGTTTGAGCCACACTGGCATGAGCGCGAGCAGCTTTGATCAGGGTTaGAGATGCCTGGGCCTGGACAGTTTTGGGGCCCAAGGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLSHTGMSASSFDQG*RCLGLDSFGAQGRA Trigger: TGCTCTGCCTTGGGCCCCAAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGCTGCTCGCGCTCATGCCAGTGTGGCTCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | GGCTGCTTTGGCCTTGGCCTGGATTACCTTGTCTTTTaGCTTGTCCCTCACCACAGCGGCCTTGGCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCFGLGLDYLVF*LVPHHSGLGFG Trigger: GCCAAAGCCAAGGCCGCTGTGGTGAGGGACAAGGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | CAAGCAGGGCCTCTTCCAGGGCTTTCTTCCCTGCCGTaGAGATACGTGACCACGAGTGCACAGCTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QAGPLPGLSSLP*RYVTTSAQLSP Trigger: AGGAGAAAGCTGTGCACTCGTGGTCACGTATCTCCACGGCAGGGAAGAAAGCCCTGGAAGAGGCCCTGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS CCA 72 bp | AAGGCCACGAGCTGGGCCTCTGTGGCACTGAGATCCTaGCTCATGGGATTAAACACAAGCAGGGCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KATSWASVALRS*LMGLNTSRASS Trigger: GGAAGAGGCCCTGCTTGTGTTTAATCCCATGAGCCAGGATCTCAGTGCCACAGAGGCCCAGCTCGTGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS CCA 72 bp | TGCCCCGTGCTTAACGTCCAAGCAGGGAGTCTTGAGTaGGACCAGTGCTTCAAGGACCACAGAGAGCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPVLNVQAGSLE*DQCFKDHREPH Trigger: ATGCGGCTCTCTGTGGTCCTTGAAGCACTGGTCCCACTCAAGACTCCCTGCTTGGACGTTAAGCACGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | GTTCCAGCGCCTCGTCGGAGACCAGCCCCAGGGCCTTaGCTAGTCAGATGTTTGAGGCCCTTGCTTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VPAPRRRPAPGP*LVRCLRPLLVI Trigger: AATCACAAGCAAGGGCCTCAAACATCTGACTAGCAAAGGCCCTGGGGCTGGTCTCCGACGAGGCGCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | CACACTGGCATGAGCGCGAGCAGCTTTGATCAGGGTTaGAGATGCCTGGGCCTGGACAGTTTTGGGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: HTGMSASSFDQG*RCLGLDSFGAQ Trigger: TTGGGCCCCAAAACTGTCCAGGCCCAGGCATCTCAAACCCTGATCAAAGCTGCTCGCGCTCATGCCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | GGCCTGCTTTGCTTTGGCCCTGACCCTTACTGTCTTGGTCTGGGTTaGAGCCACACTGGCATGAGCGCGAGCAGCTTTGATCAGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLLCFGPDPYCLGLG*SHTGMSASSFDQGL Trigger: CAAACCCTGATCAAAGCTGCTCGCGCTCATGCCAGTGTGGCTCAAACCCAGACCAAGACAGTAAGGGTCAGGGCCAAAGCAAAGCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | GCTTTCTTCCCTGCCGTGGAGATACGTGACCACGAGTaGACAGCTTTCTCCTCCACAGGCTGCACTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: AFFPAVEIRDHE*TAFSSTGCTTM Trigger: CATGGTAGTGCAGCCTGTGGAGGAGAAAGCTGTGCACTCGTGGTCACGTATCTCCACGGCAGGGAAGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS GCA 72 bp | CCTACTGTTGTACCACTGCTGTTGCTGGCACTCGACTaGTTCAGGGAGCTCAGCAGCAGGTTAGTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTVVPLLLLALD*FRELSSRLVVA Trigger: TGCCACCACTAACCTGCTGCTGAGCTCCCTGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | AGACGCCTGGATAGAGGTGGGCAGGGAAGCCTACTGTaGTACCACTGCTGTTGCTGGCACTCGACTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRLDRGGQGSLL*YHCCCWHSTAS Trigger: TGAAGCAGTCGAGTGCCAGCAACAGCAGTGGTACAACAGTAGGCTTCCCTGCCCACCTCTATCCAGGCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS GCA 72 bp | CTTCCGCCCCACAGTCTCAGAGCTGTTTTTCCGGTTTaGCCTTCCAGTTCTGGTCTGAACCGATCCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPHSLRAVFPV*PSSSGLNRSLW Trigger: CCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGACTGTGGGGCGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | TGGTCTGAACCGATCCCTTTGGCTTTCCCTTGTGCTTaGTCTGGGCTGCTTTGGCCTTGGCCTGGATTACCT | + |
|
Preference number: 6 (lower is better) Translates to: WSEPIPLAFPCA*SGLLWPWPGLP Trigger: AGGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | GTTTGCCCTTCCAGTTCTGGTCTGAACCGATCCCTTTaGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VCPSSSGLNRSL*LSLVLGLGCFG Trigger: GCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | GACACAGCAGTTTTGGGAAGTGACGTGGCAGGTGGGTaGATGGTACGAGCTTGTAGCTTTGTCTGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DTAVLGSDVAGG*MVRACSFVWLG Trigger: CCCCAGCCAGACAAAGCTACAAGCTCGTACCATCAACCCACCTGCCACGTCACTTCCCAAAACTGCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | TGCTTTGGCCCTGACCCTTACTGTCTTGGTCTGGGTTaGAGCCACACTGGCATGAGCGCGAGCAGCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CFGPDPYCLGLG*SHTGMSASSFD Trigger: ATCAAAGCTGCTCGCGCTCATGCCAGTGTGGCTCAAACCCAGACCAAGACAGTAAGGGTCAGGGCCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | GGTTTGCCCTTCCAGTTCTGGTCTGAACCGATCCCTTaGGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPFQFWSEPIP*AFPCAWSGLLW Trigger: CCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | TGTTTTTCCGGTTTGCCCTTCCAGTTCTGGTCTGAACCGATCCCTTaGGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTGGCCTTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFSGLPFQFWSEPIP*AFPCAWSGLLWPWP Trigger: AGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 90 bp | CCTTCTTCCTCTTCCGCCCCACAGTCTCAGAGCTGTTTTTCCGGTTaGCCCTTCCAGTTCTGGTCTGAACCGATCCCTTTGGCTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSAPQSQSCFSG*PFQFWSEPIPLAFP Trigger: AGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGACTGTGGGGCGGAAGAGGAAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS TCA 72 bp | GAGGATCTGCTGGGCACACTGTCGGACCTCGTCATCTaGGCACTTCCTGTCTACCTTTATGGTCTGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: EDLLGTLSDLVI*ALPVYLYGLGL Trigger: AAGTCCCAGACCATAAAGGTAGACAGGAAGTGCTCAGATGACGAGGTCCGACAGTGTGCCCAGCAGATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | GGACCTCGTCATCTGAGCACTTCCTGTCTACCTTTATaGTCTGGGACTTTCGAGGTTTTGCCGTTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPRHLSTSCLPL*SGTFEVLPFQA Trigger: GGCCTGGAACGGCAAAACCTCGAAAGTCCCAGACCATAAAGGTAGACAGGAAGTGCTCAGATGACGAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS TCA 72 bp | GAGCTGTTTTTCCGGTTTGCCCTTCCAGTTCTGGTCTaGACCGATCCCTTTGGCTTTCCCTTGTGCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELFFRFALPVLV*TDPFGFPLCLV Trigger: GACCAAGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | CCTTTGGCTTTCCCTTGTGCTTGGTCTGGGCTGCTTTaGCCTTGGCCTGGATTACCTTGTCTTTTGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLAFPCAWSGLL*PWPGLPCLLPC Trigger: ACAAGGCAAAAGACAAGGTAATCCAGGCCAAGGCCAAAGCAGCCCAGACCAAGCACAAGGGAAAGCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CCA 72 bp | TCTCAGAGCTGTTTTTCCGGTTTGCCCTTCCAGTTCTaGTCTGAACCGATCCCTTTGGCTTTCCCTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQSCFSGLPFQF*SEPIPLAFPCA Trigger: AGCACAAGGGAAAGCCAAAGGGATCGGTTCAGACCAGAACTGGAAGGGCAAACCGGAAAAACAGCTCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 |
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| CDS CAA 72 bp | ATAACCATAGACATCTCCACTTCGAAGAATGGTCGGTaGGAAGCCATCATCTCGCAGACCCTGGAGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ITIDISTSKNGR*EAIISQTLEEG Trigger: GCCTTCCTCCAGGGTCTGCGAGATGATGGCTTCCAACCGACCATTCTTCGAAGTGGAGATGTCTATGGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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| CDS CCA 72 bp | ATGAACTATAACCATAGACATCTCCACTTCGAAGAATaGTCGGTTGGAAGCCATCATCTCGCAGACCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: MNYNHRHLHFEE*SVGSHHLADPG Trigger: TCCAGGGTCTGCGAGATGATGGCTTCCAACCGACCATTCTTCGAAGTGGAGATGTCTATGGTTATAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061209.7 ENSMUST00000193170.2 ENSMUST00000193269.2 |
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