Pregenerated sensors for CCDC66 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046753Ensembl transcript IDs: ENSMUST00000050480.8, ENSMUST00000223689.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATTGTCATTGTGTGCTTaGAAAATGCTGTTGCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLSLCA*KMLLRG Trigger: ACCACGCAACAGCATTTTTCAAGCACACAATGACAA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAAAGTTTGTCATTGTGTaGTTGAAAAATGCTGTTGCG | + |
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Preference number: 2 (lower is better) Translates to: YLIDCEASAPIDRVCSEGKFVIV*LKNAVA Trigger: CGCAACAGCATTTTTCAAGCACACAATGACAAACTT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| 3UTR-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTTTGTCATTGTGTGCTaGAAAAATGCTGTTGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: LGYREISIKLRMCSRRNYFVIVC*KNAVAW Trigger: CCACGCAACAGCATTTTTCAAGCACACAATGACAAA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| 3UTR-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTTAAACCCTCATCTCTaGCCTACTGTTACTAATGTT | + |
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Preference number: 3 (lower is better) Translates to: LGYREISIKLRMCSRRNYLNPHL*PTVTNV Trigger: AACATTAGTAACAGTAGGCAAGAGATGAGGGTTTAA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| 3UTR-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACATTTGTTACCTGTACTaGGGCTTCAAATTGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LGYREISIKLRMCSRRNYICYLY*GFKLKS Trigger: AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAAT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGACTTTCAGTTTTACATTaGTTACCTGTACTTGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLSVLH*LPVLGL Trigger: AAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAG...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCTCTGTGCCAACTCCTaGGCTCGCTGCATTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSLCANS*ARCIVW Trigger: CCACACAATGCAGCGAGCTCAGGAGTTGGCACAGAG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATCCTCTGCTCCTGTTTaGGCCTCTGTGCCAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGSSAPV*ASVPTP Trigger: AGGAGTTGGCACAGAGGCTCAAACAGGAGCAGAGGA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCCTCCCCAGTCTCAGTaGGGCACACAGATCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYPPQSQ*GTQIHF Trigger: GAAATGGATCTGTGTGCCTCACTGAGACTGGGGAGG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCTCACACTGCTGAAATaGCTCTTGAGCTCTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYLTLLK*LLSSPV Trigger: CACCGGAGAGCTCAAGAGGCATTTCAGCAGTGTGAG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCTAGCCGCTTCTTCCTaGGGTTCTCTTCTACCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYLAASS*GSLLPE Trigger: CTCAGGTAGAAGAGAACCGCAGGAAGAAGCGGCTAG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCGCCTGTGTCCTTCTTaGGAGAGGCTGTTGAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYRLCPS*ERLLKC Trigger: ACACTTCAACAGCCTCTCCCAAGAAGGACACAGGCG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTCTTTGTTCTTTCTCTaGAGGCTCCGCCTGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSSLFFL*RLRLDS Trigger: GGAGTCCAGGCGGAGCCTTCAGAGAAAGAACAAAGA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTGAAGCTGGTCTTGTGTaGGACACACCAAACCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSEAGLV*DTPNRC Trigger: ACAGCGGTTTGGTGTGTCTCACACAAGACCAGCTTC...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGACGCAGCTCCAGTTCCTaGTCCTCCTTCTTTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGRSSSS*SSFFLC Trigger: ACAAAGAAAGAAGGAGGAGCAGGAACTGGAGCTGCG...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCTTCATACTGCCTCTaGATCTCCTCCCGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSSYCL*ISSRSL Trigger: AAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACATGTCCTCTTCATACTaGCTCTGCATCTCCTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYMSSSY*LCISSR Trigger: ACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACAT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTCCTCAGGGTCACTGTaGGAACTGGAGATGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSSSGSL*ELEMVV Trigger: CACTACCATCTCCAGTTCCCACAGTGACCCTGAGGA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATTTCCCCCAGAGTACTaGATATGTCAGCTGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGFPPEY*ICQLVS Trigger: GGAAACCAGCTGACATATTCAGTACTCTGGGGGAAA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGGCTGGATCCAAGAGTaGAGTCATAGAACGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGGWIQE*SHRTEK Trigger: TTTCTCCGTTCTATGACTGCACTCTTGGATCCAGCC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCCCTTAAGGATAGCTTaGTGTCGGTCCCTGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYPLRIA*CRSLFF Trigger: GAAAAACAGGGACCGACAGCAAGCTATCCTTAAGGG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCTCCTCAATCTGGGCTaGATCCAAGAGTGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSLLNLG*IQECSH Trigger: ATGACTGCACTCTTGGATCCAGCCCAGATTGAGGAG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCTTCTTTCTCCTTCTaGAGATGTGCGGGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSSFSF*RCAGYL Trigger: CAAGTACCCCGCACATCTCCAGAAGGAGAAAGAAGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACAAAATCTGCCGAAGCTaGTCTTGTGTGAGACACACC | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYKICRS*SCVRHT Trigger: GGTGTGTCTCACACAAGACCAGCTTCGGCAGATTTT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAAGATGTAGCAAGTGGTaGAATGCCTCTGTTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGRCSKW*NASVLG Trigger: TCCCAAAACAGAGGCATTTCACCACTTGCTACATCT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGGCTTCCAAGGGTTATaGCATTTTTGGGAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGGFQGL*HFWEAS Trigger: AGAAGCTTCCCAAAAATGGCATAACCCTTGGAAGCC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATCCATTCATTCTCTGTaGCAGCTTTCTGCTCACACT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGSIHSL*QLSAHT Trigger: AGTGTGAGCAGAAAGCTGCCACAGAGAATGAATGGA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCTCCAGAACAGGTCTaGCTCTTTGTTCTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSPEQV*LFVLSL Trigger: CAGAGAAAGAACAAAGAGCCAGACCTGTTCTGGAGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACGCTCGCTGCATTGTGTaGAATAGCTCGTTTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYARCIV*NSSFVF Trigger: AAAGACAAACGAGCTATTCCACACAATGCAGCGAGC...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGAAATGCCTCTGTTTTaGGAGAGATTCTCGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGEMPLF*ERFSGL Trigger: CAATCCCGAGAATCTCTCCCAAAACAGAGGCATTTC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTGGTATTGGTTGTCCTaGGTTGAAGGCCTAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSWYWLS*VEGLDK Trigger: CTTGTCTAGGCCTTCAACCCAGGACAACCAATACCA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCTGTTCTTCTGTACTaGTTACACTGGCCATTATGC | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSVLLY*LHWPLC Trigger: GCATAATGGCCAGTGTAATCAGTACAGAAGAACAGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCAATCCATTTTCTCTaGTGCTCCTGTTTAATGGCG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSIHFL*CSCLMA Trigger: CGCCATTAAACAGGAGCAGCAGAGAAAATGGATTGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGACTGTCCACTGAATTCTaGAGAAATCTCTGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLSTEF*RNLWRR Trigger: TCTTCTCCAGAGATTTCTGCAGAATTCAGTGGACAG...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACACCTTTTTGATAAGGTaGAACCTGCTCTCTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYTFLIR*NLLSDS Trigger: TGAGTCAGAGAGCAGGTTGCACCTTATCAAAAAGGT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACAGTGGATCCCTGATATaGTCAGAGTCAAATAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSGSLI*SESNSS Trigger: AGAGCTATTTGACTCTGACCATATCAGGGATCCACT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTGACTGGGAGCCAGGATaGCTCTTTAATGAATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSDWEPG*LFNESK Trigger: TTTTGATTCATTAAAGAGTCATCCTGGCTCCCAGTC...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCTTCTACCTGAGCCATaGTTGCTTTCTGATGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSLLPEP*LLSDVL Trigger: TAGAACATCAGAAAGCAATCATGGCTCAGGTAGAAG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGTGGTAGCGCATCATTaGAAATTCCTAAGTTTACGT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGVVAHH*KFLSLR Trigger: ACGTAAACTTAGGAATTTTCAATGATGCGCTACCAC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTCTCGGGCACAATCATaGGATTTTTGGTATTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSSRAQS*DFWYWL Trigger: CAACCAATACCAAAAATCTCATGATTGTGCCCGAGA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACATTAGAGGTTGTAGGTaGAATCTCCTTTTGAACACG | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYIRGCR*NLLLNT Trigger: CGTGTTCAAAAGGAGATTTCACCTACAACCTCTAAT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCCTCTGCTTTTCTTTaGTGGTCATCTTCAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYSSAFL*WSSSTC Trigger: ACAAGTTGAAGATGACCAGCAAAGAAAAGCAGAGGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATTACACTGGCCATTATaGCAGCTGTTTTCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLHWPL*QLFSLS Trigger: AGACAAAGAAAACAGCTGGCATAATGGCCAGTGTAA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTAGACAAGGGTGCGTCTaGATCAAGATAATAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSRQGCV*IKIIDL Trigger: GAGATCTATTATCTTGATCCAGACGCACCCTTGTCT...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR TCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAATGTTCCTCACCCTTTaGATATATCATTCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGMFLTL*IYHSFL Trigger: GAGGAAAGAATGATATATTCAAAGGGTGAGGAACAT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCCTTTCTTTACTAACTaGAGGAGTTTTCAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSPFFTN*RSFQRF Trigger: GAACCTCTGAAAACTCCTTCAGTTAGTAAAGAAAGG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR TCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCTTCACAGAAACTTTTaGTTTATGCTCATATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYLHRNF*FMLIWG Trigger: TCCCCATATGAGCATAAATCAAAAGTTTCTGTGAAG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR TCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCTTATCCGTACTGGGTaGAAATGTCAATCTACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYLIRTG*KCQSTI Trigger: AATAGTAGATTGACATTTTCACCCAGTACGGATAAG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTGGGTTATGCCATTTTTaGGAAGCTTCTTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSGLCHF*EASFSF Trigger: GAAAGAGAAAGAAGCTTCCCAAAAATGGCATAACCC...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTGATTTTGAATCAGCCTaGATGTATCATGTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSDFESA*MYHVPS Trigger: AGAAGGGACATGATACATCCAGGCTGATTCAAAATC...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTTTAGGATTAAGAAGTaGATCCCTGATATGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGYREISIKLRMCSRRNYFRIKK*IPDMVR Trigger: TCTGACCATATCAGGGATCCACTTCTTAATCCTAAA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTAACTCCTTTTGTTTCTaGAGAAGACCCTGTCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSNSFCF*RRPCLS Trigger: ACTAAGACAGGGTCTTCTCCAGAAACAAAAGGAGTT...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTACTGCTTATCCGTACTaGGTGAAAATGTCAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSTAYPY*VKMSIY Trigger: GTAGATTGACATTTTCACCCAGTACGGATAAGCAGT...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTACTGCTGGTGATGTTTaGAACCTTTCTTTACTAACT | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSTAGDV*NLSLLT Trigger: AGTTAGTAAAGAAAGGTTTCAAACATCACCAGCAGT...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR GCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGACTTATAATCCACTTGTaGACCAAGATTTTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLIIHL*TKILNQ Trigger: CTGATTCAAAATCTTGGTGCACAAGTGGATTATAAG...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGGGACAGTATTAACTTaGTTTTTCCATCCAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: YLIDCEASAPIDRVCSEGGTVLT*FFHPVI Trigger: AATTACTGGATGGAAAAACCAAGTTAATACTGTCCC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTACTGAATATGTCAGCTaGTTTCCATTCATTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSTEYVS*FPFILC Trigger: ACAGAGAATGAATGGAAACCAGCTGACATATTCAGT...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTCTGCTTTTCTTTGCTaGTCATCTTCAACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: STFQFYICYLYLGFKLKSSAFLC*SSSTCL Trigger: TAAACAAGTTGAAGATGACCAGCAAAGAAAAGCAGA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | CTCTGCATCTCCTCCCGTTCCCTTGCCAAGCGCAGCTCCAGTTCCTaGTCCTCCTTCTTTCTTTGTTCTTCCTCTAGCCGCTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCISSRSLAKRSSSS*SSFFLCSSSSRFFL Trigger: CAGGAAGAAGCGGCTAGAGGAAGAACAAAGAAAGAAGGAGGAGCAGGAACTGGAGCTGCGCTTGGCAAGGGAACGGGAGGAGATGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 90 bp | TCTTCTCTCTGTCTCTGCTTCAGAATGTCCTCTTCATACTGCCTCTaGATCTCCTCCCGTTCCCTTGCCAAGCGCAGCTCCAGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLCLCFRMSSSYCL*ISSRSLAKRSSSSC Trigger: GCAGGAACTGGAGCTGCGCTTGGCAAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACATTCTGAAGCAGAGACAGAGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 90 bp | GCTTCCTCCTCCCCAGTCTCAGTGAGGCACACAGATCCATTTCCCTaGTTCACACTCAGCATCAAAATCTGCCGAAGCTGGTCTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSPVSVRHTDPFP*FTLSIKICRSWSCV Trigger: CACACAAGACCAGCTTCGGCAGATTTTGATGCTGAGTGTGAACCAGGGAAATGGATCTGTGTGCCTCACTGAGACTGGGGAGGAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS TCA 90 bp | CCTGGTTCACACTCAGCATCAAAATCTGCCGAAGCTGGTCTTGTGTaGGACACACCAAACCGCTGTTCATGGTCTCCGCTGTGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSHSASKSAEAGLV*DTPNRCSWSPLWGF Trigger: AAAACCCCACAGCGGAGACCATGAACAGCGGTTTGGTGTGTCTCACACAAGACCAGCTTCGGCAGATTTTGATGCTGAGTGTGAACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | CTGCTGCTCCTGTTTAATGGCGCTGCAAGGGGACTCCAGCAGTCTTaGTTCCTTAGACTGGTCATGGACTTGAGACTTCTCACACTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLFNGAARGLQQS*FLRLVMDLRLLTLY Trigger: ATAGAGTGTGAGAAGTCTCAAGTCCATGACCAGTCTAAGGAAGCAAGACTGCTGGAGTCCCCTTGCAGCGCCATTAAACAGGAGCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | ATGATTTCTTCTCTCTGTCTCTGCTTCAGAATGTCCTCTTCATACTaGCTCTGCATCTCCTCCCGTTCCCTTGCCAAGCGCAGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MISSLCLCFRMSSSY*LCISSRSLAKRSSS Trigger: ACTGGAGCTGCGCTTGGCAAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACATTCTGAAGCAGAGACAGAGAGAAGAAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS TCA 90 bp | AGTTCTCTGATCCTCTGCTCCTGTTTGAGCCTCTGTGCCAACTCCTaGGCTCGCTGCATTGTGTGGAATAGCTCGTTTGTCTTTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLILCSCLSLCANS*ARCIVWNSSFVFRV Trigger: GACTCTAAAGACAAACGAGCTATTCCACACAATGCAGCGAGCTCAGGAGTTGGCACAGAGGCTCAAACAGGAGCAGAGGATCAGAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS CCA 90 bp | AAATTCCTAAGTTTACGTCATCTGTCTGCACGCCTGTGTCCTTCTTaGGAGAGGCTGTTGAAGTGTCAGCAGTCTCCTCAGGGTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFLSLRHLSARLCPS*ERLLKCQQSPQGHC Trigger: ACAGTGACCCTGAGGAGACTGCTGACACTTCAACAGCCTCTCCCAAGAAGGACACAGGCGTGCAGACAGATGACGTAAACTTAGGAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS TCA 90 bp | CAAGGGGACTCCAGCAGTCTTGCTTCCTTAGACTGGTCATGGACTTaGGACTTCTCACACTCTATATCAGATGGCTTCCAAGGGTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: QGDSSSLASLDWSWT*DFSHSISDGFQGLC Trigger: GCATAACCCTTGGAAGCCATCTGATATAGAGTGTGAGAAGTCTCAAGTCCATGACCAGTCTAAGGAAGCAAGACTGCTGGAGTCCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | AGCAGTCTCCTCAGGGTCACTGTGGGAACTGGAGATGGTAGTGAATaGCTTATAATCCACTTGTGCACCAAGATTTTGAATCAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLLRVTVGTGDGSE*LIIHLCTKILNQPG Trigger: TCCAGGCTGATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGTTCCCACAGTGACCCTGAGGAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS TCA 90 bp | CAAGAGTGCAGTCATAGAACGGAGAAAGTTTGTTTTCGGACCGTGTaGTACAGCCATCTCCAGAACAGGTCTGGCTCTTTGTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QECSHRTEKVCFRTV*YSHLQNRSGSLFFL Trigger: GAGAAAGAACAAAGAGCCAGACCTGTTCTGGAGATGGCTGTATCACACGGTCCGAAAACAAACTTTCTCCGTTCTATGACTGCACTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 90 bp | TTCTCGGGCACAATCATGAGATTTTTGGTATTGGTTGTCCTGGGTTaGAGGCCTAGACAAGGGTGCGTCTGGATCAAGATAATAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSGTIMRFLVLVVLG*RPRQGCVWIKIIDL Trigger: GAGATCTATTATCTTGATCCAGACGCACCCTTGTCTAGGCCTTCAACCCAGGACAACCAATACCAAAAATCTCATGATTGTGCCCGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAATCCTCTGCTCCTGTTaGAGCCTCTGTGCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGILCSC*SLCANS Trigger: GGAGTTGGCACAGAGGCTCAAACAGGAGCAGAGGAT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS TCA 90 bp | CTGATATGGTCAGAGTCAAATAGCTCTTGTTCTCGGGCACAATCATaGGATTTTTGGTATTGGTTGTCCTGGGTTGAAGGCCTAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIWSESNSSCSRAQS*DFWYWLSWVEGLDK Trigger: CTTGTCTAGGCCTTCAACCCAGGACAACCAATACCAAAAATCTCATGATTGTGCCCGAGAACAAGAGCTATTTGACTCTGACCATATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 90 bp | TTAAATGTAAACTATCTTGACTTGCTTCCTCCTCCCCAGTCTCAGTaGGGCACACAGATCCATTTCCCTGGTTCACACTCAGCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNVNYLDLLPPPQSQ*GTQIHFPGSHSASK Trigger: TTTTGATGCTGAGTGTGAACCAGGGAAATGGATCTGTGTGCCTCACTGAGACTGGGGAGGAGGAAGCAAGTCAAGATAGTTTACATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS GCA 90 bp | ACTGTGGGAACTGGAGATGGTAGTGAATGCCTTATAATCCACTTGTaGACCAAGATTTTGAATCAGCCTGGATGTATCATGTCCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVGTGDGSECLIIHL*TKILNQPGCIMSLL Trigger: CAGAAGGGACATGATACATCCAGGCTGATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGTTCCCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCCTGAGCTCGCTGCATaGTGTGGAATAGCTCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYPELAA*CGIARL Trigger: CAAACGAGCTATTCCACACAATGCAGCGAGCTCAGG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCTGCCGAAGCTGGTCTaGTGTGAGACACACCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: STFQFYICYLYLGFKLKSLPKLV*CETHQT Trigger: GGTTTGGTGTGTCTCACACAAGACCAGCTTCGGCAG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | TCATCTTCAACTTGTTTATTCAATTCTTCAATCCATTTTCTCTGCTaGTCCTGTTTAATGGCGCTGCAAGGGGACTCCAGCAGTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSTCLFNSSIHFLC*SCLMALQGDSSSLA Trigger: AGCAAGACTGCTGGAGTCCCCTTGCAGCGCCATTAAACAGGAGCAGCAGAGAAAATGGATTGAAGAATTGAATAAACAAGTTGAAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS GCA 90 bp | TGGTCATCTTCAACTTGTTTATTCAATTCTTCAATCCATTTTCTCTaGTGCTCCTGTTTAATGGCGCTGCAAGGGGACTCCAGCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSSSTCLFNSSIHFL*CSCLMALQGDSSSL Trigger: AAGACTGCTGGAGTCCCCTTGCAGCGCCATTAAACAGGAGCAGCAGAGAAAATGGATTGAAGAATTGAATAAACAAGTTGAAGATGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 90 bp | TGGAGAAGACCCTGTCTTAGTTCTGAAAGCCCCTTAAGGATAGCTTaGTGTCGGTCCCTGTTTTTCACTAATTTAGGATTAAGAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRRPCLSSESPLRIA*CRSLFFTNLGLRSG Trigger: TCCACTTCTTAATCCTAAATTAGTGAAAAACAGGGACCGACAGCAAGCTATCCTTAAGGGGCTTTCAGAACTAAGACAGGGTCTTCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTTCTTGGGAGAGGCTGTaGAAGTGTCAGCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STFQFYICYLYLGFKLKSSWERL*KCQQSP Trigger: AGGAGACTGCTGACACTTCAACAGCCTCTCCCAAGA...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGACCCCTTAAGGATAGCTaGCTGTCGGTCCCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGPLKDS*LSVPVF Trigger: AAAAACAGGGACCGACAGCAAGCTATCCTTAAGGGG...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGTAAACTATCTTGACTaGCTTCCTCCTCCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGVNYLD*LPPPQS Trigger: AGACTGGGGAGGAGGAAGCAAGTCAAGATAGTTTAC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAGGTTCTTCTACCTTTTaGATAAGGTGCAACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGGSSTF*IRCNLL Trigger: GAGCAGGTTGCACCTTATCAAAAAGGTAGAAGAACC...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACGATTTTTGGTATTGGTaGTCCTGGGTTGAAGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYDFWYW*SWVEGL Trigger: TAGGCCTTCAACCCAGGACAACCAATACCAAAAATC...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTCGTTTCCAACTCCTTTaGTTTCTGGAGAAGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: STFQFYICYLYLGFKLKSRFQLL*FLEKTL Trigger: CAGGGTCTTCTCCAGAAACAAAAGGAGTTGGAAACG...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS CCA 90 bp | CTCTTTTCTAATGTCAGTCTGTCCACTGAATTCTGCAGAAATCTCTaGAGAAGAAATGTTTCTAATACCCTTCTCTGTTACCGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LFSNVSLSTEFCRNL*RRNVSNTLLCYRST Trigger: TGTGGATCGGTAACAGAGAAGGGTATTAGAAACATTTCTTCTCCAGAGATTTCTGCAGAATTCAGTGGACAGACTGACATTAGAAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTTCCTCTGCTTTTCTTaGCTGGTCATCTTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYFLCFS*LVIFNL Trigger: CAAGTTGAAGATGACCAGCAAAGAAAAGCAGAGGAA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGATTGTGCACCAAGATTTaGAATCAGCCTGGATGTATC | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGLCTKI*NQPGCI Trigger: GATACATCCAGGCTGATTCAAAATCTTGGTGCACAA...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACAGGGTTATGCCATTTTaGGGAAGCTTCTTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYRVMPF*GSFFLF Trigger: AAAGAGAAAGAAGCTTCCCAAAAATGGCATAACCCT...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAACAATCATGAGATTTTaGGTATTGGTTGTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGTIMRF*VLVVLG Trigger: ACCCAGGACAACCAATACCAAAAATCTCATGATTGT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | AGCACCTTTCAGTTTTACATTTGTTACCTGTACTTGGGCTTCAAATTGAAGTCTGGGGACAGTATTAACTaGGTTTTTCCATCCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: STFQFYICYLYLGFKLKSGDSIN*VFPSSN Trigger: ATTACTGGATGGAAAAACCAAGTTAATACTGTCCCC...AGACTTCAATTTGAAGCCCAAGTACAGGTAACAAATGTAAAACTGAAAGGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACCATGTTCCTCACCCTTaGAATATATCATTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYHVPHP*NISFFP Trigger: AGGAAAGAATGATATATTCAAAGGGTGAGGAACATG...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGTACAGAGAAATCTCCATTAAGTTAAGGATGTGTTCAAGGAGAAATTACTCTTCACAGAAACTTTaGATTTATGCTCATATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGYREISIKLRMCSRRNYSSQKL*IYAHMG Trigger: CCCCATATGAGCATAAATCAAAAGTTTCTGTGAAGA...GTAATTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS-3UTR CAA 90 bp | TATTTAATTGATTGTGAAGCGAGCGCTCCTATTGATAGAGTATGCTCTGAAGGAAGTAGAGATCTTCTTTaGAGAAAGGTTTTCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YLIDCEASAPIDRVCSEGSRDLL*RKVFIP Trigger: GGGAATGAAAACCTTTCTCAAAAGAAGATCTCTACT...TCCTTCAGAGCATACTCTATCAATAGGAGCGCTCGCTTCACAATCAATTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS TCA 90 bp | TTTATAATCTTCCGTATATTAGAGGTTGTAGGTGAAATCTCCTTTTaGACACGGACACTGTCTTTTTCTGAATACTGCTTATCCGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: FIIFRILEVVGEISF*TRTLSFSEYCLSVL Trigger: CAGTACGGATAAGCAGTATTCAGAAAAAGACAGTGTCCGTGTTCAAAAGGAGATTTCACCTACAACCTCTAATATACGGAAGATTATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS CAA 72 bp | CTGTCTGCACGCCTGTGTCCTTCTTGGGAGAGGCTGTaGAAGTGTCAGCAGTCTCCTCAGGGTCACTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSARLCPSWERL*KCQQSPQGHCG Trigger: CCCACAGTGACCCTGAGGAGACTGCTGACACTTCAACAGCCTCTCCCAAGAAGGACACAGGCGTGCAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | TCCTCCCGTTCCCTTGCCAAGCGCAGCTCCAGTTCCTaGTCCTCCTTCTTTCTTTGTTCTTCCTCTAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSLAKRSSSS*SSFFLCSSSSR Trigger: GCGGCTAGAGGAAGAACAAAGAAAGAAGGAGGAGCAGGAACTGGAGCTGCGCTTGGCAAGGGAACGGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | TGTCTCTGCTTCAGAATGTCCTCTTCATACTGCCTCTaGATCTCCTCCCGTTCCCTTGCCAAGCGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLCFRMSSSYCL*ISSRSLAKRSS Trigger: GGAGCTGCGCTTGGCAAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACATTCTGAAGCAGAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | CATCTCCAGAACAGGTCTGGCTCTTTGTTCTTTCTCTaGAGGCTCCGCCTGGACTCCAGGTGGAGGTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HLQNRSGSLFFL*RLRLDSRWRCE Trigger: TTCACACCTCCACCTGGAGTCCAGGCGGAGCCTTCAGAGAAAGAACAAAGAGCCAGACCTGTTCTGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | TCTCTCTGTCTCTGCTTCAGAATGTCCTCTTCATACTaGCTCTGCATCTCCTCCCGTTCCCTTGCCAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLCLCFRMSSSY*LCISSRSLAKR Trigger: GCGCTTGGCAAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACATTCTGAAGCAGAGACAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | TCGGACCGTGTGATACAGCCATCTCCAGAACAGGTCTaGCTCTTTGTTCTTTCTCTGAAGGCTCCGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SDRVIQPSPEQV*LFVLSLKAPPG Trigger: TCCAGGCGGAGCCTTCAGAGAAAGAACAAAGAGCCAGACCTGTTCTGGAGATGGCTGTATCACACGGTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | ATCCTCTGCTCCTGTTTGAGCCTCTGTGCCAACTCCTaGGCTCGCTGCATTGTGTGGAATAGCTCGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILCSCLSLCANS*ARCIVWNSSFV Trigger: GACAAACGAGCTATTCCACACAATGCAGCGAGCTCAGGAGTTGGCACAGAGGCTCAAACAGGAGCAGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | CACTCAGCATCAAAATCTGCCGAAGCTGGTCTTGTGTaGGACACACCAAACCGCTGTTCATGGTCTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSASKSAEAGLV*DTPNRCSWSPL Trigger: CAGCGGAGACCATGAACAGCGGTTTGGTGTGTCTCACACAAGACCAGCTTCGGCAGATTTTGATGCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS CCA 72 bp | GGTCTGGCTCTTTGTTCTTTCTCTGAAGGCTCCGCCTaGACTCCAGGTGGAGGTGTGAAAACACCATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: GLALCSFSEGSA*TPGGGVKTPLT Trigger: TGTCAATGGTGTTTTCACACCTCCACCTGGAGTCCAGGCGGAGCCTTCAGAGAAAGAACAAAGAGCCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | AGTTTACGTCATCTGTCTGCACGCCTGTGTCCTTCTTaGGAGAGGCTGTTGAAGTGTCAGCAGTCTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRHLSARLCPS*ERLLKCQQSPQ Trigger: CTGAGGAGACTGCTGACACTTCAACAGCCTCTCCCAAGAAGGACACAGGCGTGCAGACAGATGACGTAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | TCCCCAGTCTCAGTGAGGCACACAGATCCATTTCCCTaGTTCACACTCAGCATCAAAATCTGCCGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPVSVRHTDPFP*FTLSIKICRSW Trigger: CCAGCTTCGGCAGATTTTGATGCTGAGTGTGAACCAGGGAAATGGATCTGTGTGCCTCACTGAGACTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS CAA 72 bp | ATGTTCACTCGTGACAGGGGAAGCGGCCTCCGTGTTTaGCAGGAATCCTGTGTCATTCACATCCTTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MFTRDRGSGLRV*QESCVIHILWL Trigger: CAGCCAAAGGATGTGAATGACACAGGATTCCTGCAAAACACGGAGGCCGCTTCCCCTGTCACGAGTGAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 72 bp | TGTGGCAGCTTTCTGCTCACACTGCTGAAATGCCTCTaGAGCTCTCCGGTGGACATGCTCATGTTCACTCGT | + |
|
Preference number: 6 (lower is better) Translates to: CGSFLLTLLKCL*SSPVDMLMFTR Trigger: ACGAGTGAACATGAGCATGTCCACCGGAGAGCTCAAGAGGCATTTCAGCAGTGTGAGCAGAAAGCTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 90 bp | TTCATTCTCTGTGGCAGCTTTCTGCTCACACTGCTGAAATGCCTCTaGAGCTCTCCGGTGGACATGCTCATGTTCACTCGTGACAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FILCGSFLLTLLKCL*SSPVDMLMFTRDRG Trigger: TCCCCTGTCACGAGTGAACATGAGCATGTCCACCGGAGAGCTCAAGAGGCATTTCAGCAGTGTGAGCAGAAAGCTGCCACAGAGAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 90 bp | TCAGAATGTCCTCTTCATACTGCCTCTGCATCTCCTCCCGTTCCCTaGCCAAGCGCAGCTCCAGTTCCTGCTCCTCCTTCTTTCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SECPLHTASASPPVP*PSAAPVPAPPSFFV Trigger: AACAAAGAAAGAAGGAGGAGCAGGAACTGGAGCTGCGCTTGGCAAGGGAACGGGAGGAGATGCAGAGGCAGTATGAAGAGGACATTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | ATTCTCTGTGGCAGCTTTCTGCTCACACTGCTGAAATaGCTCTTGAGCTCTCCGGTGGACATGCTCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILCGSFLLTLLK*LLSSPVDMLMF Trigger: GAACATGAGCATGTCCACCGGAGAGCTCAAGAGGCATTTCAGCAGTGTGAGCAGAAAGCTGCCACAGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | CTGTTTAATGGCGCTGCAAGGGGACTCCAGCAGTCTTaGTTCCTTAGACTGGTCATGGACTTGAGACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFNGAARGLQQS*FLRLVMDLRLL Trigger: GAGAAGTCTCAAGTCCATGACCAGTCTAAGGAAGCAAGACTGCTGGAGTCCCCTTGCAGCGCCATTAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | TCGTTCCCGCTCCTCAATCTGGGCTGGATCCAAGAGTaGAGTCATAGAACGGAGAAAGTTTGTTTTCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SFPLLNLGWIQE*SHRTEKVCFRT Trigger: GGTCCGAAAACAAACTTTCTCCGTTCTATGACTGCACTCTTGGATCCAGCCCAGATTGAGGAGCGGGAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | TTTTTGTCGGCGTCGTTCCCGCTCCTCAATCTGGGCTaGATCCAAGAGTGCAGTCATAGAACGGAGAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLSASFPLLNLG*IQECSHRTEKV Trigger: AACTTTCTCCGTTCTATGACTGCACTCTTGGATCCAGCCCAGATTGAGGAGCGGGAACGACGCCGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | AATTGTTTTTGTCGGCGTCGTTCCCGCTCCTCAATCTaGGCTGGATCCAAGAGTGCAGTCATAGAACGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NCFCRRRSRSSI*AGSKSAVIERR Trigger: TCTCCGTTCTATGACTGCACTCTTGGATCCAGCCCAGATTGAGGAGCGGGAACGACGCCGACAAAAACAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | AACTATCTTGACTTGCTTCCTCCTCCCCAGTCTCAGTaGGGCACACAGATCCATTTCCCTGGTTCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: NYLDLLPPPQSQ*GTQIHFPGSHS Trigger: TGAGTGTGAACCAGGGAAATGGATCTGTGTGCCTCACTGAGACTGGGGAGGAGGAAGCAAGTCAAGATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS CAA 72 bp | GTTCACACTCAGCATCAAAATCTGCCGAAGCTGGTCTaGTGTGAGACACACCAAACCGCTGTTCATGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHTQHQNLPKLV*CETHQTAVHGL Trigger: GAGACCATGAACAGCGGTTTGGTGTGTCTCACACAAGACCAGCTTCGGCAGATTTTGATGCTGAGTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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| CDS TCA 72 bp | TCTCTGTTACCGATCCACAGGGTGGTAGCGCATCATTaGAAATTCCTAAGTTTACGTCATCTGTCTGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLPIHRVVAHH*KFLSLRHLSAR Trigger: GCGTGCAGACAGATGACGTAAACTTAGGAATTTTCAATGATGCGCTACCACCCTGTGGATCGGTAACAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 72 bp | CTCCAGCAGTCTTGCTTCCTTAGACTGGTCATGGACTaGAGACTTCTCACACTCTATATCAGATGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQQSCFLRLVMD*RLLTLYIRWLP Trigger: TGGAAGCCATCTGATATAGAGTGTGAGAAGTCTCAAGTCCATGACCAGTCTAAGGAAGCAAGACTGCTGGAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | GCATCATTGAAAATTCCTAAGTTTACGTCATCTGTCTaGACGCCTGTGTCCTTCTTGGGAGAGGCTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASLKIPKFTSSV*TPVSFLGEAVE Trigger: TTCAACAGCCTCTCCCAAGAAGGACACAGGCGTGCAGACAGATGACGTAAACTTAGGAATTTTCAATGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 72 bp | TTCTCTGTTACCGATCCACAGGGTGGTAGCGCATCATaGAAAATTCCTAAGTTTACGTCATCTGTCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: FSVTDPQGGSAS*KIPKFTSSVCT Trigger: CGTGCAGACAGATGACGTAAACTTAGGAATTTTCAATGATGCGCTACCACCCTGTGGATCGGTAACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 90 bp | GTCACTGTGGGAACTGGAGATGGTAGTGAATGCCTTATAATCCACTaGTGCACCAAGATTTTGAATCAGCCTGGATGTATCATGTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VTVGTGDGSECLIIH*CTKILNQPGCIMSL Trigger: AAGGGACATGATACATCCAGGCTGATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGTTCCCACAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | ACAATCATGAGATTTTTGGTATTGGTTGTCCTGGGTTaGAGGCCTAGACAAGGGTGCGTCTGGATCAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: TIMRFLVLVVLG*RPRQGCVWIKI Trigger: TATCTTGATCCAGACGCACCCTTGTCTAGGCCTTCAACCCAGGACAACCAATACCAAAAATCTCATGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | TCAGAGTCAAATAGCTCTTGTTCTCGGGCACAATCATaGGATTTTTGGTATTGGTTGTCCTGGGTTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SESNSSCSRAQS*DFWYWLSWVEG Trigger: GCCTTCAACCCAGGACAACCAATACCAAAAATCTCATGATTGTGCCCGAGAACAAGAGCTATTTGACTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | CTCAGGGTCACTGTGGGAACTGGAGATGGTAGTGAATaGCTTATAATCCACTTGTGCACCAAGATTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRVTVGTGDGSE*LIIHLCTKILN Trigger: ATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGTTCCCACAGTGACCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CCA 72 bp | GTCATGGACTTGAGACTTCTCACACTCTATATCAGATaGCTTCCAAGGGTTATGCCATTTTTGGGAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VMDLRLLTLYIR*LPRVMPFLGSF Trigger: GAAGCTTCCCAAAAATGGCATAACCCTTGGAAGCCATCTGATATAGAGTGTGAGAAGTCTCAAGTCCATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 90 bp | TTCTGGAGATGTGCGGGGTACTTGGCTGATGCAGGAACATACTTTTaGAGAGGTTTGTTTATATTCCAAGCAGGCTTCTTAGGACATTTC | + |
|
Preference number: 6 (lower is better) Translates to: FWRCAGYLADAGTYF*RGLFIFQAGFLGHF Trigger: GAAATGTCCTAAGAAGCCTGCTTGGAATATAAACAAACCTCTCAAAAAGTATGTTCCTGCATCAGCCAAGTACCCCGCACATCTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | ACAAACTTTTATCACGTTCCCTTTCCCCCAGAGTACTaGATATGTCAGCTGGTTTCCATTCATTCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TNFYHVPFPPEY*ICQLVSIHSLW Trigger: CCACAGAGAATGAATGGAAACCAGCTGACATATTCAGTACTCTGGGGGAAAGGGAACGTGATAAAAGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS TCA 72 bp | TTCTTTCTCCTTCTGGAGATGTGCGGGGTACTTGGCTaGTGCAGGAACATACTTTTTGAGAGGTTTGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FFLLLEMCGVLG*CRNILFERFVY Trigger: ATAAACAAACCTCTCAAAAAGTATGTTCCTGCATCAGCCAAGTACCCCGCACATCTCCAGAAGGAGAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | CCCTGTCTTAGTTCTGAAAGCCCCTTAAGGATAGCTTaGTGTCGGTCCCTGTTTTTCACTAATTTAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: PCLSSESPLRIA*CRSLFFTNLGL Trigger: TAATCCTAAATTAGTGAAAAACAGGGACCGACAGCAAGCTATCCTTAAGGGGCTTTCAGAACTAAGACAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS CAA 72 bp | GGAACTGGAGATGGTAGTGAATGCCTTATAATCCACTaGTGCACCAAGATTTTGAATCAGCCTGGATGTATC | + |
|
Preference number: 6 (lower is better) Translates to: GTGDGSECLIIH*CTKILNQPGCI Trigger: GATACATCCAGGCTGATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
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| CDS GCA 72 bp | ACTGGAGATGGTAGTGAATGCCTTATAATCCACTTGTaGACCAAGATTTTGAATCAGCCTGGATGTATCATG | + |
|
Preference number: 6 (lower is better) Translates to: TGDGSECLIIHL*TKILNQPGCIM Trigger: CATGATACATCCAGGCTGATTCAAAATCTTGGTGCACAAGTGGATTATAAGGCATTCACTACCATCTCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS CAA 72 bp | CTAACTGAAGGAGTTTTCAGAGGTTCTTCTACCTTTTaGATAAGGTGCAACCTGCTCTCTGACTCAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTEGVFRGSSTF*IRCNLLSDSVS Trigger: AGAAACTGAGTCAGAGAGCAGGTTGCACCTTATCAAAAAGGTAGAAGAACCTCTGAAAACTCCTTCAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS CCA 72 bp | TTCACTAATTTAGGATTAAGAAGTGGATCCCTGATATaGTCAGAGTCAAATAGCTCTTGTTCTCGGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: FTNLGLRSGSLI*SESNSSCSRAQ Trigger: TTGTGCCCGAGAACAAGAGCTATTTGACTCTGACCATATCAGGGATCCACTTCTTAATCCTAAATTAGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050480.8 ENSMUST00000223689.2 |
||
| CDS TCA 72 bp | TTCCGTATATTAGAGGTTGTAGGTGAAATCTCCTTTTaGACACGGACACTGTCTTTTTCTGAATACTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FRILEVVGEISF*TRTLSFSEYCL Trigger: TAAGCAGTATTCAGAAAAAGACAGTGTCCGTGTTCAAAAGGAGATTTCACCTACAACCTCTAATATACGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
||
| CDS TCA 72 bp | AGTGTTTATAATCTTCCGTATATTAGAGGTTGTAGGTaGAATCTCCTTTTGAACACGGACACTGTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVYNLPYIRGCR*NLLLNTDTVFF Trigger: GAAAAAGACAGTGTCCGTGTTCAAAAGGAGATTTCACCTACAACCTCTAATATACGGAAGATTATAAACACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223689.2 |
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