Pregenerated sensors for CCDC63 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043036Ensembl transcript IDs: ENSMUST00000058960.14, ENSMUST00000128101.9, ENSMUST00000132701.3, ENSMUST00000152389.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAGCAAAATTCTTCTCCTCCTTGGCCAGGAAATCCTCGGTGAGCTaGTTCAGGTCCCCGTTCTCCGCCAGCTTCAGCAGCCGCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: RAKFFSSLARKSSVS*FRSPFSASFSSRRC Trigger: GCACCTGCGGCTGCTGAAGCTGGCGGAGAACGGGGACCTGAACCAGCTCACCGAGGATTTCCTGGCCAAGGAGGAGAAGAATTTTGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 90 bp | TCCTCCATCTGTTTCAGGATGCTCCGGGTGCCCTCATGGGAGGTCTaGTGCTGTGACCGCAAGTTGATGATGTCATCCTGGATCCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSICFRMLRVPSWEV*CCDRKLMMSSWIRW Trigger: CCAGCGGATCCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAAACAGATGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 90 bp | TTGACAAAGGGTTGTGGGACATCGACATCGGGCCCCTCTGCCTCCTaGAGGCGCCGGAAGGACTCTAGAAGCAGCAGGTCATTTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LTKGCGTSTSGPSAS*RRRKDSRSSRSFVF Trigger: GAAGACAAATGACCTGCTGCTTCTAGAGTCCTTCCGGCGCCTGCAGGAGGCAGAGGGGCCCGATGTCGATGTCCCACAACCCTTTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | CCATGGCCTCCACTCTCTGCTCATAGGCCTGGGCAGACTGCTCAATaGCCACGTTCATGGTCTTCTTCTGTGTCTGCAGACGCCGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: PWPPLSAHRPGQTAQ*PRSWSSSVSADAAE Trigger: TTCAGCGGCGTCTGCAGACACAGAAGAAGACCATGAACGTGGCCATTGAGCAGTCTGCCCAGGCCTATGAGCAGAGAGTGGAGGCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 90 bp | CTTCCTGCGTGGTCTTTCTCAGTTTCTCCTCCATCTGTTTCAGGATaGTCCGGGTGCCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: LPAWSFSVSPPSVSG*SGCPHGRSAAVTAS Trigger: ACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAAACAGATGGAGGAGAAACTGAGAAAGACCACGCAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | TCTCCAGGTTGTACTGAGAGATGTCTTTCTGCTGGCGGTCCTTCATaGCAGCCATCCGAGCCATGGCCTCCACTCTCTGCTCATAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SPGCTERCLSAGGPS*QPSEPWPPLSAHRP Trigger: AGGCCTATGAGCAGAGAGTGGAGGCCATGGCTCGGATGGCTGCCATGAAGGACCGCCAGCAGAAAGACATCTCTCAGTACAACCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 90 bp | GTCCAGAGGAGAGTCCACCTCTTCAAGTTTGTCACTGAAGGAGTCTaGCCCAAACACAGGCAGCACAACCCTTATGGGCTCTGGGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: VQRRVHLFKFVTEGV*PKHRQHNPYGLWGL Trigger: AAGCCCCCAGAGCCCATAAGGGTTGTGCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | CTCAGTTTCTCCTCCATCTGTTTCAGGATGCTCCGGGTGCCCTCATaGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSFSSICFRMLRVPS*EVCCCDRKLMMSSW Trigger: CCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAAACAGATGGAGGAGAAACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | ATCTCCTTCCGGAGCTGGGAGTTAGAGGTCAGCATCGTGTCAAAGTaGACAGTGACCAGGTTCAGTCGGGACTCCAGAACATGGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: ISFRSWELEVSIVSK*TVTRFSRDSRTWIC Trigger: ACAGATCCATGTTCTGGAGTCCCGACTGAACCTGGTCACTGTCCACTTTGACACGATGCTGACCTCTAACTCCCAGCTCCGGAAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | TCATGGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTaGATCCGCTGGGTCTTCTTGTGCATGGTCTCCATGTCATTGTTG | + |
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Preference number: 1 (lower is better) Translates to: SWEVCCCDRKLMMSS*IRWVFLCMVSMSLL Trigger: CAACAATGACATGGAGACCATGCACAAGAAGACCCAGCGGATCCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 90 bp | ACAGTGACCAGGTTCAGTCGGGACTCCAGAACATGGATCTGTCTCTaGAGTCTCTTGGGATTATTGGCCTCTTGTGTCCTCAAGAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TVTRFSRDSRTWICL*SLLGLLASCVLKKS Trigger: GCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCGACTGAACCTGGTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | GGTTCAGTCGGGACTCCAGAACATGGATCTGTCTCTGCAGTCTCTTaGGATTATTGGCCTCTTGTGTCCTCAAGAAGAGCTGTCTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: GSVGTPEHGSVSAVS*DYWPLVSSRRAVSG Trigger: ACCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCGACTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | GTGTCAAAGTGGACAGTGACCAGGTTCAGTCGGGACTCCAGAACATaGATCTGTCTCTGCAGTCTCTTGGGATTATTGGCCTCTTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: VSKWTVTRFSRDSRT*ICLCSLLGLLASCV Trigger: GACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCGACTGAACCTGGTCACTGTCCACTTTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | TTCTTCCCAAGCTTCTTGGATTTGACATCTTCCTGCTTCTTGGCCTaGTCCTCAAATTCAGAGCGGTCGTTAAGCTTGGCCAGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: FFPSFLDLTSSCFLA*SSNSERSLSLASRK Trigger: CTTCCTGCTGGCCAAGCTTAACGACCGCTCTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAATCCAAGAAGCTTGGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 90 bp | TGCTCATCTCCTTGTATTTGGTCTCATAAATGTCCGCTTCCTGCGTaGTCTTTCTCAGTTTCTCCTCCATCTGTTTCAGGATGCTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: CSSPCIWSHKCPLPA*SFSVSPPSVSGCSG Trigger: CCCGGAGCATCCTGAAACAGATGGAGGAGAAACTGAGAAAGACCACGCAGGAAGCGGACATTTATGAGACCAAATACAAGGAGATGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR TCA 90 bp | GATTATTGGCCTCTTGTGTCCTCAAGAAGAGCTGTCTCTGGTTCGTaGTCTTTCTCTCCATCTGAACGATCTTATCATCCAGTTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: DYWPLVSSRRAVSGS*SFSPSERSYHPVLP Trigger: TGGGAGAACTGGATGATAAGATCGTTCAGATGGAGAGAAAGATCACGAACCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCAGAGGAGAGTCCACCTCTTCAAGTTTGTCACTGAAGGAGTCTGCCCCAGGCCCCTCTGCCTCCTaGAGGCGCCGGAAGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: WSRGESTSSSLSLKESAPGPSAS*RRRKDS Trigger: AGAGTCCTTCCGGCGCCTGCAGGAGGCAGAGGGGCC...TGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGACCATCTGCTGGAGGGTACTGTGGTCCAGAGGAGAGTCCACCTCTTCACGGACTCGCCCAGCTTaGCCAGGATCTCAGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SKTICWRVLWSRGESTSSRTRPA*PGSQWH Trigger: ATGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCG...TGAAGAGGTGGACTCTCCTCTGGACCACAGTACCCTCCAGCAGATGGTCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACATGGTGTCCTGTAGTTCTTTTGTGCGTTCCCTCTGAAGGAAGTTCTCCAGACATCGGGCCCCTCTaGCTCCTGCAGGCGCCGGAA | + |
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Preference number: 2 (lower is better) Translates to: LTWCPVVLLCVPSEGSSPDIGPL*LLQAPE Trigger: TTCCGGCGCCTGCAGGAGGCAGAGGGGCCCGATGTC...TGGAGAACTTCCTTCAGAGGGAACGCACAAAAGAACTACAGGACACCATGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | TGCTGGAGGGTACTGTGGTCCAGAGGAGAGTCCACCTCTTCAAGTTaGTCACTGAAGGAGTCTGCCCCAAACACAGGCAGCACAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: CWRVLWSRGESTSSS*SLKESAPNTGSTTL Trigger: AAGGGTTGTGCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGACCACAGTACCCTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCTGTGTCTGCAGACGCCGCTGAAGCTGCTGGTAGACGTGGTCGTAGGCGAGTCTCTATTTCCTTaGTTGTGGGTCTCTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: LLLCLQTPLKLLVDVVVGESLFP*LWVSWT Trigger: GGTCCAAGAGACCCACAAGCAAGGAAATAGAGACTC...GCCTACGACCACGTCTACCAGCAGCTTCAGCGGCGTCTGCAGACACAGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCACGAGGCTCAGCCTATCACCTTCTTCTTGAGCCTTATCTCGTCCCCCTTTCATGGGAGGTCTGCTaGTGTGACCGCAAGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: HPRGSAYHLLLEPYLVPLSWEVC*CDRKLM Trigger: CATCAACTTGCGGTCACAGCAGCAGACCTCCCATGA...AAGGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGGCTGAGCCTCGTGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | TACTGCTGCAGATTGATGTCCGTGACCTTCCCGGACTCGCCCAGCTaGCCCAGGATCTCAGTGGCATCGCAGTTGATCTTCTTAAACATC | + |
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Preference number: 2 (lower is better) Translates to: YCCRLMSVTFPDSPS*PRISVASQLIFLNI Trigger: GATGTTTAAGAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCGGGAAGGTCACGGACATCAATCTGCAGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGTTCCCGGATCTCCAGGTTGTACTGAGAGATGTCTTTCTGCTGGCGGTCGGGACTCCAGAACATaGATCTGTCTCTGCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VPVPGSPGCTERCLSAGGRDSRT*ICLCSL Trigger: GAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCG...ACCGCCAGCAGAAAGACATCTCTCAGTACAACCTGGAGATCCGGGAACTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | TTCCCGGACTCGCCCAGCTTGCCCAGGATCTCAGTGGCATCGCAGTaGATCTTCTTAAACATCTTCTCCACCGAGTTCTTGAGATACTCC | + |
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Preference number: 2 (lower is better) Translates to: FPDSPSLPRISVASQ*IFLNIFSTEFLRYS Trigger: GGAGTATCTCAAGAACTCGGTGGAGAAGATGTTTAAGAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTCTCCAAGACCATCTGCTGGAGGGTACTGTGGTCCAGAGGAGAGTCCACGCTGTCTCTGGTTCGTaGTCTTTCTCTCCATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: EVLQDHLLEGTVVQRRVHAVSGS*SFSPSE Trigger: TTCAGATGGAGAGAAAGATCACGAACCAGAGACAGC...GTGGACTCTCCTCTGGACCACAGTACCCTCCAGCAGATGGTCTTGGAGAACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | AGGTTCAGTCGGGACTCCAGAACATGGATCTGTCTCTGCAGTCTCTaGGGATTATTGGCCTCTTGTGTCCTCAAGAAGAGCTGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RFSRDSRTWICLCSL*GLLASCVLKKSCLW Trigger: CCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCGACTGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | TTCCCCTTCTTCCCAAGCTTCTTGGATTTGACATCTTCCTGCTTCTaGGCCTGGTCCTCAAATTCAGAGCGGTCGTTAAGCTTGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FPFFPSFLDLTSSCF*AWSSNSERSLSLAS Trigger: GCTGGCCAAGCTTAACGACCGCTCTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAATCCAAGAAGCTTGGGAAGAAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTTGCCCAGGATCTCAGTGGCATCGCAGTTGATCTTCTTAAACATCTTCGGCCATCAGACTAGCTaGATCTTCTTACCAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSLPRISVASQLIFLNIFGHQTS*IFLPTQ Trigger: TTGGGTTGGTAAGAAGATTCAGCTAGTCTGATGGCC...GAAGATGTTTAAGAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACATGGTGTCCTGTAGTTCTTTTGTGCGTTCCCTCTGAAGGAAGTTCTCCACCAGCAGGAAGGACTTaGGTTTCGTCTCGTGATCAT | + |
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Preference number: 2 (lower is better) Translates to: LTWCPVVLLCVPSEGSSPPAGRT*VSSRDH Trigger: ATGATCACGAGACGAAACTCAAGTCCTTCCTGCTGG...TGGAGAACTTCCTTCAGAGGGAACGCACAAAAGAACTACAGGACACCATGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCACCTCTTCAAGTTTGTCACTGAAGGAGTCTGCCCCAAACACAGGCAGCACACATGGATCTGTCTCTaGAGTCTCTTGGGATTATTG | + |
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Preference number: 2 (lower is better) Translates to: VHLFKFVTEGVCPKHRQHTWICL*SLLGLL Trigger: CAATAATCCCAAGAGACTGCAGAGACAGATCCATGT...GTGCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCTTGCCCAGGATCTCAGTGGCATCGCAGTTGATCTTCTTAAACATCTTCGATTTGACATCTTCCTaGTTCTTGGCCTGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PSLPRISVASQLIFLNIFDLTSS*FLAWSS Trigger: TGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAATC...GAAGATGTTTAAGAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CAA 90 bp | CAGAACATGGATCTGTCTCTGCAGTCTCTTGGGATTATTGGCCTCTaGTGTCCTCAAGAAGAGCTGTCTCTGGTTCGTGATCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QNMDLSLQSLGIIGL*CPQEELSLVRDLSL Trigger: GAGAGAAAGATCACGAACCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGACATCTTCCTGCTTCTTGGCCTGGTCCTCAAATTCAGAGCGGTCGTTAAGTCCATGAAGTTTTTCTaGTTGATGTCCAGGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FDIFLLLGLVLKFRAVVKSMKFF*LMSRFF Trigger: GAAGAACCTGGACATCAACCAGAAAAACTTCATGGA...CTTAACGACCGCTCTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 72 bp | GGTTGTGGGACATCGACATCGGGCCCCTCTGCCTCCTaGAGGCGCCGGAAGGACTCTAGAAGCAGCAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GCGTSTSGPSAS*RRRKDSRSSRS Trigger: TGACCTGCTGCTTCTAGAGTCCTTCCGGCGCCTGCAGGAGGCAGAGGGGCCCGATGTCGATGTCCCACAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGTTGACAAAGGGTTGTGGGACATCGACATCGGGCCCCTCTGCCTCCTGCGAGCGGTCGTTAAGCTaGGCCAGCAGGAAGGACTTG | + |
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Preference number: 3 (lower is better) Translates to: KGLTKGCGTSTSGPSASCERSLS*ASRKDL Trigger: CAAGTCCTTCCTGCTGGCCAAGCTTAACGACCGCTC...GCAGGAGGCAGAGGGGCCCGATGTCGATGTCCCACAACCCTTTGTCAACCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR CAA 90 bp | CACCCACGAGGCTCAGCCTATCACCTTCTTCTTGAGCCTTATCTCGTCCCCCTTCCGGACTCGCCCAGCTaGCCCAGGATCTCAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: HPRGSAYHLLLEPYLVPLPDSPS*PRISVA Trigger: TGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCGG...AAGGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGGCTGAGCCTCGTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR TCA 72 bp | CATCCAGTTCTCCCAGCAGCACCTTCATGGAGGAGATaGGCGCCTCGTAGTCCCCCTTGGTCTGCAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HPVLPAAPSWRR*APRSPPWSAAG Trigger: TCCTGCTGCAGACCAAGGGGGACTACGAGGCGCTCATCTCCTCCATGAAGGTGCTGCTGGGAGAACTGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 72 bp | TTCTTCTCCTCCTTGGCCAGGAAATCCTCGGTGAGCTaGTTCAGGTCCCCGTTCTCCGCCAGCTTCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FFSSLARKSSVS*FRSPFSASFSS Trigger: GCTGCTGAAGCTGGCGGAGAACGGGGACCTGAACCAGCTCACCGAGGATTTCCTGGCCAAGGAGGAGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 72 bp | TTCAGGATGCTCCGGGTGCCCTCATGGGAGGTCTGCTaGTGTGACCGCAAGTTGATGATGTCATCCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: FRMLRVPSWEVC*CDRKLMMSSWI Trigger: GATCCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 72 bp | TGTTTCAGGATGCTCCGGGTGCCCTCATGGGAGGTCTaGTGCTGTGACCGCAAGTTGATGATGTCATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CFRMLRVPSWEV*CCDRKLMMSSW Trigger: CCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR GCA 72 bp | TCAGTTTCTCCTCCATCTGTTTCAGGATGCTCCGGGTaGCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: SVSPPSVSGCSG*PHGRSAAVTAS Trigger: ACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATCCTGAAACAGATGGAGGAGAAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 72 bp | TGTACTGAGAGATGTCTTTCTGCTGGCGGTCCTTCATaGCAGCCATCCGAGCCATGGCCTCCACTCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: CTERCLSAGGPS*QPSEPWPPLSA Trigger: AGCAGAGAGTGGAGGCCATGGCTCGGATGGCTGCCATGAAGGACCGCCAGCAGAAAGACATCTCTCAGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR TCA 72 bp | CAAAATTCTTCTCCTCCTTGGCCAGGAAATCCTCGGTaGGCTGGTTCAGGTCCCCGTTCTCCGCCAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: QNSSPPWPGNPR*AGSGPRSPPAS Trigger: TGAAGCTGGCGGAGAACGGGGACCTGAACCAGCTCACCGAGGATTTCCTGGCCAAGGAGGAGAAGAATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR TCA 72 bp | GGTCCAGAGGAGAGTCCACCTCTTCAAGTTTGTCACTaGAGGAGTCTGCCCCAAACACAGGCAGCACAACCC | + |
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Preference number: 3 (lower is better) Translates to: GPEESPPLQVCH*RSLPQTQAAQP Trigger: GGGTTGTGCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAGTCTGCCCCAAACACAGGCAGCACAACCCTTATGGGCTCTGGGGGCTTTGTCTCTGCAGTCTCTaGGGATTATTGGCCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: EGVCPKHRQHNPYGLWGLCLCSL*GLLASC Trigger: ACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACA...AAGCCCCCAGAGCCCATAAGGGTTGTGCTGCCTGTGTTTGGGGCAGACTCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR CCA 72 bp | GTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTaGATCCGCTGGGTCTTCTTGTGCATGGTCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: VCCCDRKLMMSS*IRWVFLCMVSM Trigger: CATGGAGACCATGCACAAGAAGACCCAGCGGATCCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
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| 3UTR TCA 72 bp | AGCTTGGCCAGCAGGAAGGACTTGAGTTTCGTCTCGTaGTCATATAGACGTTCCAGTTCCCGGATCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLASRKDLSFVS*SYRRSSSRISR Trigger: CCTGGAGATCCGGGAACTGGAACGTCTATATGATCACGAGACGAAACTCAAGTCCTTCCTGCTGGCCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR GCA 72 bp | AGAGTCCACCTCTTCAAGTTTGTCACTGAAGGAGTCTaGCCCAAACACAGGCAGCACAACCCTTATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVHLFKFVTEGV*PKHRQHNPYGL Trigger: GAGCCCATAAGGGTTGTGCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | CCAGGTTCTTCGGAGACTTCACGAGGCTTAGAAGCATaGTGGTCTCGGCCTGTTCAGCTTTCAGAGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGSSETSRGLEA*WSRPVQLSESL Trigger: TAGAGACTCTGAAAGCTGAACAGGCCGAGACCACCATGCTTCTAAGCCTCGTGAAGTCTCCGAAGAACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | TGGACAGTGACCAGGTTCAGTCGGGACTCCAGAACATaGATCTGTCTCTGCAGTCTCTTGGGATTATTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WTVTRFSRDSRT*ICLCSLLGLLA Trigger: GGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCGACTGAACCTGGTCACTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTGTGTCTGCAGACGCCGCTGAAGCTGCTGGTAGACGTGGTCGTAGGCATGAAGTTTTTCTGGTaGATGTCCAGGTTCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLCLQTPLKLLVDVVVGMKFFW*MSRFFG Trigger: TCCGAAGAACCTGGACATCAACCAGAAAAACTTCAT...GCCTACGACCACGTCTACCAGCAGCTTCAGCGGCGTCTGCAGACACAGAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | AGGAAGTTCTCCAAGACCATCTGCTGGAGGGTACTGTaGTCCAGAGGAGAGTCCACCTCTTCAAGTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RKFSKTICWRVL*SRGESTSSSLS Trigger: TGACAAACTTGAAGAGGTGGACTCTCCTCTGGACCACAGTACCCTCCAGCAGATGGTCTTGGAGAACTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCCAGAGGAGAGTCCACCTCTTCAAGTTTGTCACTGAAGGAGTCTGCCCCACCAAGCTTCTTGGATTaGACATCTTCCTGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: WSRGESTSSSLSLKESAPPSFLD*TSSCFL Trigger: CAAGAAGCAGGAAGATGTCAAATCCAAGAAGCTTGG...TGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR TCA 72 bp | GACATGGTGTCCTGTAGTTCTTTTGTGCGTTCCCTCTaGAGGAAGTTCTCCAAGACCATCTGCTGGAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DMVSCSSFVRSL*RKFSKTICWRV Trigger: TACCCTCCAGCAGATGGTCTTGGAGAACTTCCTTCAGAGGGAACGCACAAAAGAACTACAGGACACCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR GCA 72 bp | TTGATGATGTCATCCTGGATCCGCTGGGTCTTCTTGTaGATGGTCTCCATGTCATTGTTGAGCTCGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LMMSSWIRWVFL*MVSMSLLSSVT Trigger: TGTCACCGAGCTCAACAATGACATGGAGACCATGCACAAGAAGACCCAGCGGATCCAGGATGACATCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | GTCTGCAGCAGGAAGCGTAGTTCCATGAAGTTTTTCTaGTTGATGTCCAGGTTCTTCGGAGACTTCACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCSRKRSSMKFF*LMSRFFGDFTR Trigger: CCTCGTGAAGTCTCCGAAGAACCTGGACATCAACCAGAAAAACTTCATGGAACTACGCTTCCTGCTGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | GGGACTCCAGAACATGGATCTGTCTCTGCAGTCTCTTaGGATTATTGGCCTCTTGTGTCCTCAAGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTPEHGSVSAVS*DYWPLVSSRRA Trigger: AGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | TTCTCAAAGAGGAGATCCTCAATCTCCTTCCGGAGCTaGGAGTTAGAGGTCAGCATCGTGTCAAAGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: FSKRRSSISFRS*ELEVSIVSKWT Trigger: TGTCCACTTTGACACGATGCTGACCTCTAACTCCCAGCTCCGGAAGGAGATTGAGGATCTCCTCTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | AGCTTCTTGGATTTGACATCTTCCTGCTTCTTGGCCTaGTCCTCAAATTCAGAGCGGTCGTTAAGCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SFLDLTSSCFLA*SSNSERSLSLA Trigger: GGCCAAGCTTAACGACCGCTCTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAATCCAAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | TGTGACCGCAAGTTGATGATGTCATCCTGGATCCGCTaGGTCTTCTTGTGCATGGTCTCCATGTCATTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CDRKLMMSSWIR*VFLCMVSMSLL Trigger: CAACAATGACATGGAGACCATGCACAAGAAGACCCAGCGGATCCAGGATGACATCATCAACTTGCGGTCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGATAGCAAAATACTGCTGCAGATTGATGTCCGTGACCTTCCCGGACTCGAAATTCTTCTCCTCCTaGGCCAGGAAATCCTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SMIAKYCCRLMSVTFPDSKFFSS*ARKSSV Trigger: CACCGAGGATTTCCTGGCCAAGGAGGAGAAGAATTT...CGAGTCCGGGAAGGTCACGGACATCAATCTGCAGCAGTATTTTGCTATCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CCA 72 bp | GAACATGGATCTGTCTCTGCAGTCTCTTGGGATTATTaGCCTCTTGTGTCCTCAAGAAGAGCTGTCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EHGSVSAVSWDY*PLVSSRRAVSG Trigger: ACCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACATCTTCCTGCTTCTTGGCCTGGTCCTCAAATTCAGAGCGGTCGTTAAGAGAGTCTCTATTTCCTaGCTTGTGGGTCTCTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FDIFLLLGLVLKFRAVVKRVSIS*LVGLLD Trigger: GTCCAAGAGACCCACAAGCAAGGAAATAGAGACTCT...CTTAACGACCGCTCTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGATAGCAAAATACTGCTGCAGATTGATGTCCGTGACCTTCCCGGACTCGAGTCTCTTGGGATTATaGGCCTCTTGTGTCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMIAKYCCRLMSVTFPDSSLLGL*ASCVLK Trigger: CTTGAGGACACAAGAGGCCAATAATCCCAAGAGACT...CGAGTCCGGGAAGGTCACGGACATCAATCTGCAGCAGTATTTTGCTATCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCTCAAAGAGGAGATCCTCAATCTCCTTCCGGAGCTGGGAGTTAGAGGTCCCAAAACATTTTGTCTaGTTCTACATAATGAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: AFSKRRSSISFRSWELEVPKHFV*FYIMSA Trigger: AGCGCTCATTATGTAGAACAAGACAAAATGTTTTGG...GACCTCTAACTCCCAGCTCCGGAAGGAGATTGAGGATCTCCTCTTTGAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTCTCCATCTGAACGATCTTATCATCCAGTTCTCCCAGCAGCACCTTCATTCTCTATTTCCTTGCTaGTGGGTCTCTTGGACCGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLHLNDLIIQFSQQHLHSLFPC*WVSWTE Trigger: TTCGGTCCAAGAGACCCACAAGCAAGGAAATAGAGA...ATGAAGGTGCTGCTGGGAGAACTGGATGATAAGATCGTTCAGATGGAGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR TCA 72 bp | GGGTCTCTTGGACCGAACTCAGGCCATCAGACTAGCTaGATCTTCTTACCAACCCAAAACATTTTGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSLGPNSGHQTS*IFLPTQNILSC Trigger: ACAAGACAAAATGTTTTGGGTTGGTAAGAAGATTCAGCTAGTCTGATGGCCTGAGTTCGGTCCAAGAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR GCA 90 bp | CTCCGCCAGCTTCAGCAGCCGCAGGTGCGCCACCTCATAGCTCGCGAAACTCTCGGCTGTCTACCATCTTaGGGAACTGCTGCCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQLQQPQVRHLIARETLGCLPS*GTAASV Trigger: AACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCC...GAGAGTTTCGCGAGCTATGAGGTGGCGCACCTGCGGCTGCTGAAGCTGGCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | GTGCCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGTaGATGATGTCATCCTGGATCCGCTGGGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSWEVCCCDRK*MMSSWIRWVFL Trigger: CAAGAAGACCCAGCGGATCCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATGAGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | AGATTGATGTCCGTGACCTTCCCGGACTCGCCCAGCTaGCCCAGGATCTCAGTGGCATCGCAGTTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLMSVTFPDSPS*PRISVASQLIF Trigger: GAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCGGGAAGGTCACGGACATCAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGGGCCCCTCTGCCTCCTaGAGGCGCCGGAAGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQQENIYSLWCGIQAPTRGPSAS*RRRKDS Trigger: AGAGTCCTTCCGGCGCCTGCAGGAGGCAGAGGGGCC...CCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACGACATCGGGCCCCTCTaGCTCCTGCAGGCGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPRISKKTFILSGVEYRHDIGPL*LLQAPE Trigger: TTCCGGCGCCTGCAGGAGGCAGAGGGGCCCGATGTC...GTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| 3UTR CAA 72 bp | ACAGGCACCCACGAGGCTCAGCCTATCACCTTCTTCTaGAGCCTTATCTCGTCCCCCTTCTCTGACATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTHEAQPITFF*SLISSPFSDMV Trigger: CACCATGTCAGAGAAGGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGGCTGAGCCTCGTGGGTGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGATAGCAAAATACTGCTGCAGATTGATGTCCGTGACCTTCCCGGACTCGTCTGCCTGGGCGAGCTaGTCCCTGGCCTTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SMIAKYCCRLMSVTFPDSSAWAS*SLAFSE Trigger: TTCCGAGAAGGCCAGGGAGCAGCTCGCCCAGGCAGA...CGAGTCCGGGAAGGTCACGGACATCAATCTGCAGCAGTATTTTGCTATCATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | GCGAAACTCTCGCCCTTCCCCTTCTTCCCAAGCTTCTaGGATTTGACATCTTCCTGCTTCTTGGCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSPFPFFPSF*DLTSSCFLAWS Trigger: GGACCAGGCCAAGAAGCAGGAAGATGTCAAATCCAAGAAGCTTGGGAAGAAGGGGAAGGGCGAGAGTTTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | GTACTGTGGTCCAGAGGAGAGTCCACCTCTTCAAGTTaGTCACTGAAGGAGTCTGCCCCAAACACAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLWSRGESTSSS*SLKESAPNTGS Trigger: GCTGCCTGTGTTTGGGGCAGACTCCTTCAGTGACAAACTTGAAGAGGTGGACTCTCCTCTGGACCACAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR TCA 90 bp | CACCCACGAGGCTCAGCCTATCACCTTCTTCTTGAGCCTTATCTCGTCCCCCTTAAGAGCCCTTCCTCCTaGCTTTCTTCATCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSAYHLLLEPYLVPLKSPSS*LSSSLA Trigger: TGCCAGTGATGAAGAAAGTCAGGAGGAAGGGCTCTT...AAGGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGGCTGAGCCTCGTGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTAGAAGCATGGTGGTCTCGGCCTGTTCAGCTTTCAGAGTCTCTATTTCCTAAGTTCCGAAAGGCCTaGAGAGCCCTTCCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLEAWWSRPVQLSESLFPKFRKA*RALPPD Trigger: GTCAGGAGGAAGGGCTCTTCAGGCCTTTCGGAACTT...AGGAAATAGAGACTCTGAAAGCTGAACAGGCCGAGACCACCATGCTTCTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACTCTGCCTGGGCGAGCTaGTCCCTGGCCTTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSARKHLFSLVWNTGTHSAWAS*SLAFSE Trigger: TTCCGAGAAGGCCAGGGAGCAGCTCGCCCAGGCAGA...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | GGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGCGGACTCGCCCAGCTTaGCCAGGATCTCAGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSARKHLFSLVWNTGTHERTRPA*PGSQWH Trigger: ATGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCG...CTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| 3UTR CAA 72 bp | CGGGACTCCAGAACATGGATCTGTCTCTGCAGTCTCTaGGGATTATTGGCCTCTTGTGTCCTCAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDSRTWICLCSL*GLLASCVLKKS Trigger: GCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | TCGCCCAGCTTGCCCAGGATCTCAGTGGCATCGCAGTaGATCTTCTTAAACATCTTCTCCACCGAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLPRISVASQ*IFLNIFSTEFL Trigger: CAAGAACTCGGTGGAGAAGATGTTTAAGAAGATCAACTGCGATGCCACTGAGATCCTGGGCAAGCTGGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| 3UTR CAA 72 bp | CGTCCCCCTTCTCTGACATGGTGTCCTGTAGTTCTTTaGTGCGTTCCCTCTGAAGGAAGTTCTCCAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPSLTWCPVVL*CVPSEGSSPRP Trigger: TGGTCTTGGAGAACTTCCTTCAGAGGGAACGCACAAAAGAACTACAGGACACCATGTCAGAGAAGGGGGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACAAGTTCCGAAAGGCCTaGAGAGCCCTTCCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPRISKKTFILSGVEYRHKFRKA*RALPPD Trigger: GTCAGGAGGAAGGGCTCTTCAGGCCTTTCGGAACTT...GTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACTGCTGGAGGGTACTGTaGTCCAGAGGAGAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LGSARKHLFSLVWNTGTHCWRVL*SRGEST Trigger: GGTGGACTCTCCTCTGGACCACAGTACCCTCCAGCA...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| 3UTR CAA 72 bp | AAGTTGATGATGTCATCCTGGATCCGCTGGGTCTTCTaGTGCATGGTCTCCATGTCATTGTTGAGCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLMMSSWIRWVF*CMVSMSLLSSV Trigger: CACCGAGCTCAACAATGACATGGAGACCATGCACAAGAAGACCCAGCGGATCCAGGATGACATCATCAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR TCA 90 bp | GGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGTCTCCACCGAGTTCTTaGGATACTCCAGGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSARKHLFSLVWNTGTHESPPSS*DTPGSC Trigger: GCAAGACCCTGGAGTATCTCAAGAACTCGGTGGAGA...CTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | CTCTTGTGTCCTCAAGAAGAGCTGTCTCTGGTTCGTGATCTTTCTCTCCATCTGATCTTGCGGAACTGCTaGCTCAGTTTCCGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCPQEELSLVRDLSLHLILRNC*LSFRSS Trigger: AGAGCTACGGAAACTGAGGCAGCAGTTCCGCAAGAT...CAGATGGAGAGAAAGATCACGAACCAGAGACAGCTCTTCTTGAGGACACAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCACCATCTTGCGGAACTaGTGCCTCAGTTTCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGSARKHLFSLVWNTGTTILRN*CLSFRS Trigger: GCTACGGAAACTGAGGCAGCAGTTCCGCAAGATGGT...GGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCTCATGGGAGGTCTGCTaGTGTGACCGCAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSARKHLFSLVWNTGTSWEVC*CDRKLM Trigger: CATCAACTTGCGGTCACAGCAGCAGACCTCCCATGA...GGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGCCGGGACTCCAGAACATaGATCTGTCTCTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISKKTFILSGVEYRHPRGRDSRT*ICLCSL Trigger: GAGACTGCAGAGACAGATCCATGTTCTGGAGTCCCG...GCCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| 3UTR CAA 72 bp | GATCTGTCTCTGCAGTCTCTTGGGATTATTGGCCTCTaGTGTCCTCAAGAAGAGCTGTCTCTGGTTCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSLQSLGIIGL*CPQEELSLVRD Trigger: ATCACGAACCAGAGACAGCTCTTCTTGAGGACACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCAGCAGGAAGGACTTaGGTTTCGTCTCGTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPRISKKTFILSGVEYRHPAGRT*VSSRDH Trigger: ATGATCACGAGACGAAACTCAAGTCCTTCCTGCTGG...GTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR TCA 90 bp | GATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGTTTGTGCGTTCCCTCTaGAGGAAGTTCTCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: DQQENIYSLWCGIQAPTRFVRSL*RKFSKT Trigger: GGTCTTGGAGAACTTCCTTCAGAGGGAACGCACAAA...CCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCATCTTGCGGAACTGCTaGCTCAGTTTCCGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGSARKHLFSLVWNTGTILRNC*LSFRSS Trigger: AGAGCTACGGAAACTGAGGCAGCAGTTCCGCAAGAT...GGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGGCTGTCTACCATCTTaGGGAACTGCTGCCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSARKHLFSLVWNTGTHGCLPS*GTAASV Trigger: AACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCC...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAATCTCCTTCCGGAGCTaGGAGTTAGAGGTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RISKKTFILSGVEYRHPRISFRS*ELEVSI Trigger: GATGCTGACCTCTAACTCCCAGCTCCGGAAGGAGAT...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | GGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGTGTCCGCTTCCTGCGTaGTCTTTCTCAGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSARKHLFSLVWNTGTHECPLPA*SFSVSP Trigger: AGGAGAAACTGAGAAAGACCACGCAGGAAGCGGACA...CTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGTCCAAGACCATCTGCTaGAGGGTACTGTGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGPRISKKTFILSGVEYRSKTIC*RVLWSR Trigger: TCTGGACCACAGTACCCTCCAGCAGATGGTCTTGGA...CCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGAAGAGCCCTTCCTCCTaGCTTTCTTCATCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGPRISKKTFILSGVEYRKSPSS*LSSSGQ Trigger: TTGCCCAGATGAAGAAAGTCAGGAGGAAGGGCTCTT...CCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR TCA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGCTGTCTCTGGTTCGTaGTCTTTCTCTCCATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RISKKTFILSGVEYRHPRAVSGS*SFSPSE Trigger: TTCAGATGGAGAGAAAGATCACGAACCAGAGACAGC...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGATTTGACATCTTCCTaGTTCTTGGCCTGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSARKHLFSLVWNTGTHDLTSS*FLAWSS Trigger: TGAGGACCAGGCCAAGAAGCAGGAAGATGTCAAATC...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGACATCTTCCTGCTTCTTaGCCTGGTCCTCAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RISKKTFILSGVEYRHPRHLPAS*PGPQIQ Trigger: CTGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATG...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCCCTGTAGTTCTTTTGTaGGTTCCCTCTGAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KALGSARKHLFSLVWNTGPVVLL*VPSEGS Trigger: ACTTCCTTCAGAGGGAACGCACAAAAGAACTACAGG...GCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGACTGACTTTCTTCATCTaGGCAAGACAGAGAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RISKKTFILSGVEYRHPRLTFFI*ARQRKR Trigger: CCTCTTTCTCTGTCTTGCCCAGATGAAGAAAGTCAG...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACAAGAAGAGCTGTCTCTaGTTCGTGATCTTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSARKHLFSLVWNTGTHKKSCL*FVIFLS Trigger: GGAGAGAAAGATCACGAACCAGAGACAGCTCTTCTT...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAACATGGATCTGTCTCTaGAGTCTCTTGGGATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: RISKKTFILSGVEYRHPRTWICL*SLLGLL Trigger: CAATAATCCCAAGAGACTGCAGAGACAGATCCATGT...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCTCCATGAAGTTTTTCTaGTTGATGTCCAGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGSARKHLFSLVWNTGTSMKFF*LMSRFF Trigger: GAAGAACCTGGACATCAACCAGAAAAACTTCATGGA...GGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACTCATCTCCTTGTATTTaGTCTCATAAATGTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRISKKTFILSGVEYRHSSPCI*SHKCPL Trigger: AAGCGGACATTTATGAGACCAAATACAAGGAGATGA...GTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAATGATAGCAAAATACTaGTGCAGATTGATGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKALGSARKHLFSLVWNTMIAKY*CRLMSV Trigger: CACGGACATCAATCTGCAGCAGTATTTTGCTATCAT...TGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS GCA 90 bp | TTGCGGAACTGCTGCCTCAGTTTCCGTAGCTCTGCCTGGGCGAGCTaGTCCCTGGCCTTCTCGGAAAGTTCCGAAAGGCCTGAAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNCCLSFRSSAWAS*SLAFSESSERPEEP Trigger: GGGCTCTTCAGGCCTTTCGGAACTTTCCGAGAAGGCCAGGGAGCAGCTCGCCCAGGCAGAGCTACGGAAACTGAGGCAGCAGTTCCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 ENSMUST00000152389.8 |
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| CDS CCA 90 bp | TCTACCATCTTGCGGAACTGCTGCCTCAGTTTCCGTAGCTCTGCCTaGGCGAGCTGCTCCCTGGCCTTCTCGGAAAGTTCCGAAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: STILRNCCLSFRSSA*ASCSLAFSESSERP Trigger: AGGCCTTTCGGAACTTTCCGAGAAGGCCAGGGAGCAGCTCGCCCAGGCAGAGCTACGGAAACTGAGGCAGCAGTTCCGCAAGATGGTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 ENSMUST00000152389.8 |
||
| CDS-3UTR CAA 90 bp | CCACTCTCTGCTCATAGGCCTGGGCAGACTGCTCAATGGCCACGTTCATGGTCTCGGCTGTCTACCATCTaGCGGAACTGCTGCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSAHRPGQTAQWPRSWSRLSTI*RNCCLS Trigger: ACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCG...AGACCATGAACGTGGCCATTGAGCAGTCTGCCCAGGCCTATGAGCAGAGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152389.8 |
||
| CDS TCA 90 bp | CTATTTCCTTGTATTGGCCGGCGATCATACGCTGGTGGCGGAAGTTaGAGGACTTGCGGCTGTCTACCATCTTGCGGAACTGCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFPCIGRRSYAGGGS*RTCGCLPSCGTAAS Trigger: TGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCACCAGCGTATGATCGCCGGCCAATACAAGGAAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 |
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| CDS TCA 90 bp | TGGCCTTCTCGGAAAGTTCCGAAAGGCCTGAAGAGCCCTTCCTCCTaGCTTTCTTCATCTGGGCAAGACAGAGAAAGAGGATGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: WPSRKVPKGLKSPSS*LSSSGQDRERGCPH Trigger: GTGTGGGCATCCTCTTTCTCTGTCTTGCCCAGATGAAGAAAGTCAGGAGGAAGGGCTCTTCAGGCCTTTCGGAACTTTCCGAGAAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058960.14 ENSMUST00000132701.3 |
||
| CDS-3UTR CAA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACCCGGACTCGCCCAGCTaGCCCAGGATCTCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGSARKHLFSLVWNTGTHPDSPS*PRISVA Trigger: TGCCACTGAGATCCTGGGCAAGCTGGGCGAGTCCGG...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | ATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGCCGGCTGTCTACCATCTaGCGGAACTGCTGCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISKKTFILSGVEYRHPRGRLSTI*RNCCLS Trigger: ACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCG...GCCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | CCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCAGAGCGGTCGTTAAGCTaGGCCAGCAGGAAGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRISKKTFILSGVEYRHPERSLS*ASRKDL Trigger: CAAGTCCTTCCTGCTGGCCAAGCTTAACGACCGCTC...TGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | GGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCTATCACCTTCTTCTaGAGCCTTATCTCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRISKKTFILSGVEYRHPITFF*SLISSP Trigger: GGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGG...GTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | GATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGAAATTCTTCTCCTCCTaGGCCAGGAAATCCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DQQENIYSLWCGIQAPTRKFFSS*ARKSSV Trigger: CACCGAGGATTTCCTGGCCAAGGAGGAGAAGAATTT...CCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCATCCGCTGGGTCTTCTaGTGCATGGTCTCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KALGSARKHLFSLVWNTGIRWVF*CMVSMS Trigger: TGACATGGAGACCATGCACAAGAAGACCCAGCGGAT...GCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | ATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGGCTGCTGTGACCGCAAGTaGATGATGTCATCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ISKKTFILSGVEYRHPRGCCDRK*MMSSWI Trigger: GATCCAGGATGACATCATCAACTTGCGGTCACAGCA...GCCTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | GGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGAGTGTCTCTGCAGTCTCTaGGGATTATTGGCCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSARKHLFSLVWNTGTHECLCSL*GLLASC Trigger: ACAAGAGGCCAATAATCCCAAGAGACTGCAGAGACA...CTCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGACATCTTCCTGCTTCTaGGCCTGGTCCTCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGPRISKKTFILSGVEYRTSSCF*AWSSNS Trigger: TGAATTTGAGGACCAGGCCAAGAAGCAGGAAGATGT...CCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACCCAAGCTTCTTGGATTaGACATCTTCCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSARKHLFSLVWNTGTHPSFLD*TSSCFL Trigger: CAAGAAGCAGGAAGATGTCAAATCCAAGAAGCTTGG...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | AGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACGATTCTTCCCAAGCTTCTaGGATTTGACATCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RISKKTFILSGVEYRHPRFFPSF*DLTSSC Trigger: GCAGGAAGATGTCAAATCCAAGAAGCTTGGGAAGAA...TCGTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCATGAAGTTTTTCTGGTaGATGTCCAGGTTCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KALGSARKHLFSLVWNTGMKFFW*MSRFFG Trigger: TCCGAAGAACCTGGACATCAACCAGAAAAACTTCAT...GCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGCCCTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAAGTCTCTTGGGATTATaGGCCTCTTGTGTCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKALGSARKHLFSLVWNTSLLGL*ASCVLK Trigger: CTTGAGGACACAAGAGGCCAATAATCCCAAGAGACT...TGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAGGGCCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS-3UTR CAA 90 bp | CTAGGATCAGCAAGAAAACATTTATTCTCTCTGGTGTGGAATACAGGCACCCACTCAGTGGCATCGCAGTaGATCTTCTTAAACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSARKHLFSLVWNTGTHSVASQ*IFLNIF Trigger: GAAGATGTTTAAGAAGATCAACTGCGATGCCACTGA...GTGGGTGCCTGTATTCCACACCAGAGAGAATAAATGTTTTCTTGCTGATCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058960.14 |
||
| CDS CAA 72 bp | CCGGCGATCATACGCTGGTGGCGGAAGTTGAAGGACTaGCGGCTGTCTACCATCTTGCGGAACTGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAIIRWWRKLKD*RLSTILRNCCL Trigger: GAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCACCAGCGTATGATCGCCGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 ENSMUST00000152389.8 |
||
| CDS CAA 90 bp | ATACGCTGGTGGCGGAAGTTGAAGGACTTGCGGCTGTCTACCATCTaGCGGAACTGCTGCCTCAGTTTCCGTAGCTCTGCCTGGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRWWRKLKDLRLSTI*RNCCLSFRSSAWAS Trigger: GCTCGCCCAGGCAGAGCTACGGAAACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCACCAGCGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 ENSMUST00000152389.8 |
||
| CDS TCA 72 bp | CTGCTCCCTGGCCTTCTCGGAAAGTTCCGAAAGGCCTaGAGAGCCCTTCCTCCTGACTTTCTTCATCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPGLLGKFRKA*RALPPDFLHLG Trigger: GCCCAGATGAAGAAAGTCAGGAGGAAGGGCTCTTCAGGCCTTTCGGAACTTTCCGAGAAGGCCAGGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058960.14 ENSMUST00000132701.3 |
||
| CDS CAA 72 bp | TGGCGGAAGTTGAAGGACTTGCGGCTGTCTACCATCTaGCGGAACTGCTGCCTCAGTTTCCGTAGCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WRKLKDLRLSTI*RNCCLSFRSSA Trigger: GGCAGAGCTACGGAAACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 ENSMUST00000152389.8 |
||
| CDS CAA 90 bp | TTGTATTGGCCGGCGATCATACGCTGGTGGCGGAAGTTGAAGGACTaGCGGCTGTCTACCATCTTGCGGAACTGCTGCCTCAGTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LYWPAIIRWWRKLKD*RLSTILRNCCLSFR Trigger: ACGGAAACTGAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCACCAGCGTATGATCGCCGGCCAATACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 |
||
| CDS CAA 90 bp | TCTATTTCCTTGTATTGGCCGGCGATCATACGCTGGTGGCGGAAGTaGAAGGACTTGCGGCTGTCTACCATCTTGCGGAACTGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SISLYWPAIIRWWRK*KDLRLSTILRNCCL Trigger: GAGGCAGCAGTTCCGCAAGATGGTAGACAGCCGCAAGTCCTTCAACTTCCGCCACCAGCGTATGATCGCCGGCCAATACAAGGAAATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058960.14 ENSMUST00000128101.9 ENSMUST00000132701.3 |
||
| CDS CCA 72 bp | AGGCCTGAAGAGCCCTTCCTCCTGACTTTCTTCATCTaGGCAAGACAGAGAAAGAGGATGCCCACACGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RPEEPFLLTFFI*ARQRKRMPTRP Trigger: AGGTCGTGTGGGCATCCTCTTTCTCTGTCTTGCCCAGATGAAGAAAGTCAGGAGGAAGGGCTCTTCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058960.14 ENSMUST00000132701.3 |
||
| CDS TCA 72 bp | CGGAAAGTTCCGAAAGGCCTGAAGAGCCCTTCCTCCTaGCTTTCTTCATCTGGGCAAGACAGAGAAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RKVPKGLKSPSS*LSSSGQDRERG Trigger: TCCTCTTTCTCTGTCTTGCCCAGATGAAGAAAGTCAGGAGGAAGGGCTCTTCAGGCCTTTCGGAACTTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058960.14 ENSMUST00000132701.3 |
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