Pregenerated sensors for CCDC62 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061882Ensembl transcript IDs: ENSMUST00000094320.10, ENSMUST00000165148.4
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGTTTGGACCCTGGCCTCTCCAAGGGCATTCTGGGCGCCTCGCTTaGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTGGCTCAGTAC | + |
Preference number: 1 (lower is better) Translates to: QFGPWPLQGHSGRLA*LVQDQLCILSLAQY Trigger: GTACTGAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCCCTTGGAGAGGCCAGGGTCCAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR GCA 90 bp | CAAGGGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTaGATTCTTAGTCTGGCTCAGTACAACCAGTCTGAAGAGAAACCA | + |
Preference number: 1 (lower is better) Translates to: QGHSGRLAWLVQDQL*ILSLAQYNQSEEKP Trigger: TGGTTTCTCTTCAGACTGGTTGTACTGAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR GCA 90 bp | GCTCAGTACAACCAGTCTGAAGAGAAACCAAGTATTTATAGAGTGTaGCAGCCTCACCCTCATTACAAACGTGAGCTCAACAGCCTCCCC | + |
Preference number: 1 (lower is better) Translates to: AQYNQSEEKPSIYRV*QPHPHYKRELNSLP Trigger: GGGGAGGCTGTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAATACTTGGTTTCTCTTCAGACTGGTTGTACTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 90 bp | GGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTaGCTCAGTACAACCAGTCTGAAGAGAAACCAAGTATTTATAGAG | + |
Preference number: 1 (lower is better) Translates to: GASLGWFRISSAFLV*LSTTSLKRNQVFIE Trigger: CTCTATAAATACTTGGTTTCTCTTCAGACTGGTTGTACTGAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR TCA 90 bp | ACTTATCTCATGTCTACCACTACAGCAAAGTCCAACACTAAAAGCTaGAGAGAAGAAAGACTGTGTCACGTACCGGAAGCTGGCTTTTGG | + |
Preference number: 1 (lower is better) Translates to: TYLMSTTTAKSNTKS*REERLCHVPEAGFW Trigger: CCAAAAGCCAGCTTCCGGTACGTGACACAGTCTTTCTTCTCTTCAGCTTTTAGTGTTGGACTTTGCTGTAGTGGTAGACATGAGATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 90 bp | GATACTCCCAGGAAGCTGTTAAAAGGTTTCTGCATCTTGACAGCTTaGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTA | + |
Preference number: 1 (lower is better) Translates to: DTPRKLLKGFCILTA*LLSFPFSVFLNAEV Trigger: TACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAGCTTCCTGGGAGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCGCTGGCGCACGCCTTTaGTCCCAGCCCTCAGGAGGC | + |
Preference number: 2 (lower is better) Translates to: GILGASLGWFRISSAFLVAGARL*SQPSGG Trigger: GCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGC...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | GTTTGTAAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCTCTGGGCGCCTCGCTTaGCTGGTTCAGGATCAGCTC | + |
Preference number: 2 (lower is better) Translates to: VCKAGHGDIQVVDSCHPSSGRLA*LVQDQL Trigger: GAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGA...GCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTTACAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | AAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCACCGGATCTGGATTCTCAGTTTaGACCCTGGCCTCTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: KAGHGDIQVVDSCHPSTGSGFSV*TLASPR Trigger: CCTTGGAGAGGCCAGGGTCCAAACTGAGAATCCAGA...TCCGGTGCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | GTTTGTAAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCGGTACAGCTGTCTCCTaGGGACAGACAGCCTTAACT | + |
Preference number: 2 (lower is better) Translates to: VCKAGHGDIQVVDSCHPSGTAVS*GQTALT Trigger: AGTTAAGGCTGTCTGTCCTCAGGAGACAGCTGTACC...GCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTTACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | TCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGGCGAGGCGCCTCGCTTGGCTaGTTCAGGATCAGCTCTGCA | + |
Preference number: 2 (lower is better) Translates to: STLLFPMEHVIGVPVGRRGASLG*FRISSA Trigger: TGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCC...TCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | CATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATAAGCTGCTTGTTAGCCTaGCAGTGCTGGCGCACGCCT | + |
Preference number: 2 (lower is better) Translates to: HLGRKPEASNKGTLTHTISCLLA*QCWRTP Trigger: AGGCGTGCGCCAGCACTGCCAGGCTAACAAGCAGCT...TATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | TGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCCTGTTAAAAGGTTTCTaGATCTTGACAGCTTGGCTT | + |
Preference number: 2 (lower is better) Translates to: CWRTPLIPALRRQKQADFLLKGF*ILTAWL Trigger: AAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG...GAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | CCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCTGTGAGTTCGAGCCGGAAGCTGGCTTTTaGGAAATGGTGGTTATGATG | + |
Preference number: 2 (lower is better) Translates to: PLIPALRRQKQADFCEFEPEAGF*EMVVMM Trigger: CATCATAACCACCATTTCCCAAAAGCCAGCTTCCGG...CTCGAACTCACAGAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | CAGAGCCAGGCAAGGTACAGCTGTCTCCTGAGGACAGACAGCCTTAACTGCACAAAGGTTTCTGCATCTTaGCAGCTTGGCTTTTGTCTT | + |
Preference number: 2 (lower is better) Translates to: QSQARYSCLLRTDSLNCTKVSAS*QLGFCL Trigger: AAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTT...TGTGCAGTTAAGGCTGTCTGTCCTCAGGAGACAGCTGTACCTTGCCTGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTTGTTAGCCTGGCAGTaGTGGCGCACGCCTTTGATC | + |
Preference number: 2 (lower is better) Translates to: IKQWISDPVLPCFFQWSMLLAWQ*WRTPLI Trigger: GATCAAAGGCGTGCGCCAGCACTGCCAGGCTAACAA...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | TATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTGGAAATCACGTACCGGAAGCTaGCTTTTGGGAAATGGTGGT | + |
Preference number: 2 (lower is better) Translates to: YRASSRTARATQRHPVWKSRTGS*LLGNGG Trigger: ACCACCATTTCCCAAAAGCCAGCTTCCGGTACGTGA...TTTCCAAACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTCTCAGTTTGGACCCTaGCCTCTCCAAGGGCATTCT | + |
Preference number: 2 (lower is better) Translates to: IKQWISDPVLPCFFQWSMSQFGP*PLQGHS Trigger: AGAATGCCCTTGGAGAGGCCAGGGTCCAAACTGAGA...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTCTGGATTCTCAGTTTaGACCCTGGCCTCTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: IKQWISDPVLPCFFQWSMSGFSV*TLASPR Trigger: CCTTGGAGAGGCCAGGGTCCAAACTGAGAATCCAGA...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | TCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGGCGAGGGAAATGGTGGTTATaGTGTGAATATGCACAGAGA | + |
Preference number: 2 (lower is better) Translates to: STLLFPMEHVIGVPVGRRGKWWL*CEYAQR Trigger: TCTCTGTGCATATTCACATCATAACCACCATTTCCC...TCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | TATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTGGAAATTATCTTCAGGTGACTaGCTGTACTGTATCCACTCT | + |
Preference number: 2 (lower is better) Translates to: YRASSRTARATQRHPVWKLSSGD*LYCIHS Trigger: AGAGTGGATACAGTACAGTCAGTCACCTGAAGATAA...TTTCCAAACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | ATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACAGCCTCAATCCATATAAAACTTaGTCTTCCAGCAAGCGCTGT | + |
Preference number: 2 (lower is better) Translates to: IYRVCQPHPHYKRELNSLNPYKT*SSSKRC Trigger: ACAGCGCTTGCTGGAAGATCAAGTTTTATATGGATT...GAGGCTGTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTACTGTATCCACTCTCTaGCTTCCAAAGACAATTCTG | + |
Preference number: 2 (lower is better) Translates to: FVYRASSRTARATQRHPVTVSTL*LPKTIL Trigger: CAGAATTGTCTTTGGAAGGCAGAGAGTGGATACAGT...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCTGCATCTTGACAGCTTaGCTTTTGTCTTTCCCTTTC | + |
Preference number: 2 (lower is better) Translates to: HENHLGRKPEASNKGTLTCILTA*LLSFPF Trigger: GAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCA...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCAATCCATATAAAACTTaGTCTTCCAGCAAGCGCTGT | + |
Preference number: 2 (lower is better) Translates to: HENHLGRKPEASNKGTLTNPYKT*SSSKRC Trigger: ACAGCGCTTGCTGGAAGATCAAGTTTTATATGGATT...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CAA 90 bp | CCCAGGAAGCTGTTAAAAGGTTTCTGCATCTTGACAGCTTGGCTTTaGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTA | + |
Preference number: 2 (lower is better) Translates to: PRKLLKGFCILTAWL*SFPFSVFLNAEVEV Trigger: TACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAGCTTCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTCTTTGTATTAAAGGCTaGTTTTGTGGGAATCACAGT | + |
Preference number: 2 (lower is better) Translates to: GRKPEASNKGTLTHTIQPLCIKG*FCGNHS Trigger: ACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAG...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | ACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAATTATCTTCAGGTGACTaGCTGTACTGTATCCACTCT | + |
Preference number: 2 (lower is better) Translates to: TAWLLSFPFSVFLNAEVELSSGD*LYCIHS Trigger: AGAGTGGATACAGTACAGTCAGTCACCTGAAGATAA...TTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR TCA 90 bp | ACCACAAGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTAAGGTTTCTGCATCTTaGCAGCTTGGCTTTTGTCTT | + |
Preference number: 2 (lower is better) Translates to: TTSLSQPGIYRCYRYFKPKVSAS*QLGFCL Trigger: AAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTT...AGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACTTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGCTGTTAAAAGGTTTCTaGATCTTGACAGCTTGGCTT | + |
Preference number: 2 (lower is better) Translates to: IKQWISDPVLPCFFQWSMLLKGF*ILTAWL Trigger: AAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR GCA 90 bp | AAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTTTGTATTAAAGGCTaGTTTTGTGGGAATCACAGT | + |
Preference number: 2 (lower is better) Translates to: KGFCILTAWLLSFPFSVFLCIKG*FCGNHS Trigger: ACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAG...AAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CCA 90 bp | AGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTATGAAAACCATGAAAATCATCTaGGAAGAAAGCCTGAAGCCT | + |
Preference number: 2 (lower is better) Translates to: SLSQPGIYRCYRYFKPMKTMKII*EESLKP Trigger: AGGCTTCAGGCTTTCTTCCCAGATGATTTTCATGGT...TTTCATAGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 72 bp | AGGCTGCGTTCAAGCTGCTTGTTAGCCTGGCAGTGCTaGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAG | + |
Preference number: 3 (lower is better) Translates to: RLRSSCLLAWQC*RTPLIPALRRQ Trigger: CTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCACTGCCAGGCTAACAAGCAGCTTGAACGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 72 bp | GGCCTCTCCAAGGGCATTCTGGGCGCCTCGCTTGGCTaGTTCAGGATCAGCTCTGCATTCTTAGTCTGGCTC | + |
Preference number: 3 (lower is better) Translates to: GLSKGILGASLG*FRISSAFLVWL Trigger: GAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCCCTTGGAGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 72 bp | CCCTGGCCTCTCCAAGGGCATTCTGGGCGCCTCGCTTaGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTG | + |
Preference number: 3 (lower is better) Translates to: PWPLQGHSGRLA*LVQDQLCILSL Trigger: CAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCCCTTGGAGAGGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCCTGCGTTCAAGCTGCTaGTTAGCCTGGCAGTGCTGG | + |
Preference number: 3 (lower is better) Translates to: GILGASLGWFRISSAFLVLRSSC*LAWQCW Trigger: CCAGCACTGCCAGGCTAACAAGCAGCTTGAACGCAG...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR GCA 72 bp | CTTAGGAGACAGTCACCTACCAGGCTGCGTTCAAGCTaGTTGTTAGCCTGGCAGTGCTGGCGCACGCCTTTG | + |
Preference number: 3 (lower is better) Translates to: LRRQSPTRLRSS*LLAWQCWRTPL Trigger: CAAAGGCGTGCGCCAGCACTGCCAGGCTAACAAGCAGCTTGAACGCAGCCTGGTAGGTGACTGTCTCCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR GCA 72 bp | TCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTaGATTCTTAGTCTGGCTCAGTACAACCAGTCTGAA | + |
Preference number: 3 (lower is better) Translates to: SGRLAWLVQDQL*ILSLAQYNQSE Trigger: TTCAGACTGGTTGTACTGAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | GTTTGTAAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCATCTGGATTCTCAGTTaGGACCCTGGCCTCTCCAAG | + |
Preference number: 3 (lower is better) Translates to: VCKAGHGDIQVVDSCHPSIWILS*DPGLSK Trigger: CTTGGAGAGGCCAGGGTCCAAACTGAGAATCCAGAT...GCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTTACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 72 bp | CTGTTCTACCCTGCTTTTTCCAATGGAGCATGTAATTaGTGTTCCTGTTGGCAGGCGAGTGGAGGAGCAGCC | + |
Preference number: 3 (lower is better) Translates to: LFYPAFSNGACN*CSCWQASGGAA Trigger: GGCTGCTCCTCCACTCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCGCCTTCCAAAGACAATaGCATAGCCTCAGTGAATGT | + |
Preference number: 3 (lower is better) Translates to: GILGASLGWFRISSAFLVAFQRQ*HSLSEC Trigger: ACATTCACTGAGGCTATGCAATTGTCTTTGGAAGGC...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094320.10 |
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3UTR-3UTR CAA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTTGACAGCTTGGCTTTaGTCTTTCCCTTTCAGCGTA | + |
Preference number: 3 (lower is better) Translates to: GILGASLGWFRISSAFLVLTAWL*SFPFSV Trigger: TACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAA...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | TGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCAAAGGTTTCTGCATCTaGACAGCTTGGCTTTTGTCT | + |
Preference number: 3 (lower is better) Translates to: CWRTPLIPALRRQKQADFKGFCI*TAWLLS Trigger: AGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTT...GAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CCA 72 bp | CAGAGTAGGAAAAGTTTACTATCTGGATTCTCAGTTTaGACCCTGGCCTCTCCAAGGGCATTCTGGGCGCCT | + |
Preference number: 3 (lower is better) Translates to: QSRKSLLSGFSV*TLASPRAFWAP Trigger: AGGCGCCCAGAATGCCCTTGGAGAGGCCAGGGTCCAAACTGAGAATCCAGATAGTAAACTTTTCCTACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | GTTTGTAAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCCTGCATCTTGACAGCTaGGCTTTTGTCTTTCCCTTT | + |
Preference number: 3 (lower is better) Translates to: VCKAGHGDIQVVDSCHPSLHLDS*AFVFPF Trigger: AAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAG...GCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTTACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR TCA 72 bp | AAACTTGATCTTCCAGCAAGCGCTGTCCTGTGTAAGTaGACTGTCTACTACAGAGCCAGGCAAGGTACAGCT | + |
Preference number: 3 (lower is better) Translates to: KLDLPASAVLCK*TVYYRARQGTA Trigger: AGCTGTACCTTGCCTGGCTCTGTAGTAGACAGTTCACTTACACAGGACAGCGCTTGCTGGAAGATCAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR-3UTR CAA 90 bp | ATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACAGCCTCACCGGAAGCTGGCTTTaGGGAAATGGTGGTTATGAT | + |
Preference number: 3 (lower is better) Translates to: IYRVCQPHPHYKRELNSLTGSWL*GNGGYD Trigger: ATCATAACCACCATTTCCCAAAAGCCAGCTTCCGGT...GAGGCTGTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR-3UTR CAA 90 bp | ATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACAGCCTCCTGCATCTTGACAGCTaGGCTTTTGTCTTTCCCTTT | + |
Preference number: 3 (lower is better) Translates to: IYRVCQPHPHYKRELNSLLHLDS*AFVFPF Trigger: AAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAG...GAGGCTGTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR GCA 72 bp | AACCAGTCTGAAGAGAAACCAAGTATTTATAGAGTGTaGCAGCCTCACCCTCATTACAAACGTGAGCTCAAC | + |
Preference number: 3 (lower is better) Translates to: NQSEEKPSIYRV*QPHPHYKRELN Trigger: GTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAATACTTGGTTTCTCTTCAGACTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR CCA 72 bp | CTGAAGAGAAGAAAGACTGTGTCACGTACCGGAAGCTaGCTTTTGGGAAATGGTGGTTATGATGTGAATATG | + |
Preference number: 3 (lower is better) Translates to: LKRRKTVSRTGS*LLGNGGYDVNM Trigger: CATATTCACATCATAACCACCATTTCCCAAAAGCCAGCTTCCGGTACGTGACACAGTCTTTCTTCTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR-3UTR CAA 90 bp | TATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTGGAAACAAAGACAATTCTGTTaGCATAGCCTCAGTGAATGT | + |
Preference number: 3 (lower is better) Translates to: YRASSRTARATQRHPVWKQRQFC*HSLSEC Trigger: ACATTCACTGAGGCTATGCAAACAGAATTGTCTTTG...TTTCCAAACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165148.4 |
||
3UTR TCA 72 bp | GCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTaGAGTAGAAGTAGGGCCTCAGTTTTTAGGCATGAA | + |
Preference number: 3 (lower is better) Translates to: AFVFPFQRISKR*SRSRASVFRHE Trigger: TTCATGCCTAAAAACTGAGGCCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR CAA 72 bp | AGCTGCTTGTTAGCCTGGCAGTGCTGGCGCACGCCTTaGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGAT | + |
Preference number: 4 (lower is better) Translates to: SCLLAWQCWRTP*IPALRRQKQAD Trigger: ATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCACTGCCAGGCTAACAAGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR TCA 90 bp | CTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTGGCTCGTCTGGCACTCTGCTTaGTTGGACTCCAGGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: LGASLGWFRISSAFLVWLVWHSA*LDSRVL Trigger: CAAGACCCTGGAGTCCAATCAAGCAGAGTGCCAGAC...GAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR GCA 90 bp | TGGCAGTGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCATTGATGTCATGCCACTaGTTCTCGTCAGACAGCGAG | + |
Preference number: 4 (lower is better) Translates to: WQCWRTPLIPALRRQKQALMSCH*FSSDSE Trigger: CTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAA...TGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
3UTR CAA 72 bp | AGGAGACAGTCACCTACCAGGCTGCGTTCAAGCTGCTaGTTAGCCTGGCAGTGCTGGCGCACGCCTTTGATC | + |
Preference number: 4 (lower is better) Translates to: RRQSPTRLRSSC*LAWQCWRTPLI Trigger: GATCAAAGGCGTGCGCCAGCACTGCCAGGCTAACAAGCAGCTTGAACGCAGCCTGGTAGGTGACTGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR TCA 90 bp | CTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTGGCTCCTGCGACCATGTCATTaGGCTCCTTATCGCGGTCTT | + |
Preference number: 4 (lower is better) Translates to: LGASLGWFRISSAFLVWLLRPCH*APYRGL Trigger: AAGACCGCGATAAGGAGCTCAATGACATGGTCGCAG...GAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR TCA 90 bp | CAGAGCCAGGCAAGGTACAGCTGTCTCCTGAGGACAGACAGCCTTAACTGCACAGGAAGTCTCAACTTCTaGTCCGATGTTCTGGCGCCG | + |
Preference number: 4 (lower is better) Translates to: QSQARYSCLLRTDSLNCTGSLNF*SDVLAP Trigger: CGGCGCCAGAACATCGGATCAGAAGTTGAGACTTCC...TGTGCAGTTAAGGCTGTCTGTCCTCAGGAGACAGCTGTACCTTGCCTGGCTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR CCA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCGCTGTTTTGAGCAGCTaGAAAGGCCCAGGTAGACGT | + |
Preference number: 4 (lower is better) Translates to: GILGASLGWFRISSAFLVAVLSS*KGPGRR Trigger: ACGTCTACCTGGGCCTTTCCAGCTGCTCAAAACAGC...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | AAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCACCGGAACAAGAGCTCTTGTCTaGCCCATTGTGCTGAGCCAA | + |
Preference number: 4 (lower is better) Translates to: KAGHGDIQVVDSCHPSTGTRALV*PIVLSQ Trigger: TTGGCTCAGCACAATGGGTCAGACAAGAGCTCTTGT...TCCGGTGCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTTGATGTCATGCCACTaGTTCTCGTCAGACAGCGAG | + |
Preference number: 4 (lower is better) Translates to: GILGASLGWFRISSAFLVLMSCH*FSSDSE Trigger: CTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAA...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCATGATGTTACTTGGGTaGCAGCACTTGGACTCGGAC | + |
Preference number: 4 (lower is better) Translates to: GILGASLGWFRISSAFLVMMLLG*QHLDSD Trigger: GTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCAT...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTGCTCACCTTCGAGCTTaGTGCAGCGCTCCTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: FVYRASSRTARATQRHPVAHLRA*CSAPPG Trigger: CCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGC...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CTACTACAGAGCCAGGCAAGGTACAGCTGTCTCCTGAGGACAGACAGCCTTAACTGCAATTGTCCTACCTaGGCAGAGAGGTCCACTAAC | + |
Preference number: 4 (lower is better) Translates to: LLQSQARYSCLLRTDSLNCNCPT*AERSTN Trigger: GTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA...GTTAAGGCTGTCTGTCCTCAGGAGACAGCTGTACCTTGCCTGGCTCTGTAGTAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCTGTGAGTTCGAGAGACTACATTTGGGGTaGAGCAGGAGACCTCAGATG | + |
Preference number: 4 (lower is better) Translates to: PLIPALRRQKQADFCEFERLHLG*SRRPQM Trigger: CATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCT...CTCGAACTCACAGAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | TGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCATCTGTCTCAGATTCTaGAGCTCGGAATTTGTACGA | + |
Preference number: 4 (lower is better) Translates to: CWRTPLIPALRRQKQADFICLRF*SSEFVR Trigger: TCGTACAAATTCCGAGCTCCAGAATCTGAGACAGAT...GAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | GGCATTCTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCAGCTTTTCTCTTGCTTaGGTCGAATTATCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: GILGASLGWFRISSAFLVSFSLA*VELSPL Trigger: GAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCT...GACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAGAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCTATATTTCATTGCGCTaGCACTTCTTGAACAAGTGC | + |
Preference number: 4 (lower is better) Translates to: CWRTPLIPALRRQKQADFYISLR*HFLNKC Trigger: GCACTTGTTCAAGAAGTGTCAGCGCAATGAAATATA...GAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTGTCAGGAAGGGCCGCTaGCTCCTCTTCTCTTTCAGC | + |
Preference number: 4 (lower is better) Translates to: GRKPEASNKGTLTHTIQPVRKGR*LLFSFS Trigger: GCTGAAAGAGAAGAGGAGTCAGCGGCCCTTCCTGAC...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CCAAGTATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACGTCAGGAAGGGCCGCTaGCTCCTCTTCTCTTTCAGC | + |
Preference number: 4 (lower is better) Translates to: PSIYRVCQPHPHYKRELNVRKGR*LLFSFS Trigger: GCTGAAAGAGAAGAGGAGTCAGCGGCCCTTCCTGAC...GTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAATACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTAGGGTCAGCACTTTCTaGCGGTCCTCTTCCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: FVYRASSRTARATQRHPVRVSTF*RSSSQE Trigger: CTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCT...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCAGGGTCAGCACTTTCTaGCGGTCCTCTTCCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: HENHLGRKPEASNKGTLTRVSTF*RSSSQE Trigger: CTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCT...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCGGAAGTCTCAACTTCTaGTCCGATGTTCTGGCGCCG | + |
Preference number: 4 (lower is better) Translates to: HENHLGRKPEASNKGTLTGSLNF*SDVLAP Trigger: CGGCGCCAGAACATCGGATCAGAAGTTGAGACTTCC...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGGAGTGTGTGGCCTTCTaGGCCATCTCCTGGAGCTGC | + |
Preference number: 4 (lower is better) Translates to: IKQWISDPVLPCFFQWSMECVAF*AISWSC Trigger: GCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTC...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAGGTGTCGCCGAAGGGTTCATaGATGACTCCCCCGCCCCCA | + |
Preference number: 4 (lower is better) Translates to: VLKAAFVGITVLFTYLQVSPKGS*MTPPPP Trigger: TGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGA...CACCTGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | ACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAATCGCCGAAGGGTTCATaGATGACTCCCCCGCCCCCA | + |
Preference number: 4 (lower is better) Translates to: TAWLLSFPFSVFLNAEVESPKGS*MTPPPP Trigger: TGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGA...TTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | ATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACAGCCTCAGACTACATTTGGGGTaGAGCAGGAGACCTCAGATG | + |
Preference number: 4 (lower is better) Translates to: IYRVCQPHPHYKRELNSLRLHLG*SRRPQM Trigger: CATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCT...GAGGCTGTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTACGTCTCCGCCATCTTaGCATCACGTAAAGCGTGCT | + |
Preference number: 4 (lower is better) Translates to: GRKPEASNKGTLTHTIQPTSPPS*HHVKRA Trigger: AGCACGCTTTACGTGATGCCAAGATGGCGGAGACGT...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CAA 72 bp | CTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATaGACCCATACAATACAACCTTCATCGGCAGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LGRKPEASNKGT*THTIQPSSAVL Trigger: AAGCACTGCCGATGAAGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTGGAAATGGACTCCAGGGTCTTaGCCTTCTTCATCAGTGACT | + |
Preference number: 4 (lower is better) Translates to: YRASSRTARATQRHPVWKWTPGS*PSSSVT Trigger: AGTCACTGATGAAGAAGGTCAAGACCCTGGAGTCCA...TTTCCAAACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTGGAAATCTGACCCATTGTGCTaGGCCAACATGACCTCAAAC | + |
Preference number: 4 (lower is better) Translates to: YRASSRTARATQRHPVWKSDPLC*ANMTSN Trigger: GTTTGAGGTCATGTTGGCTCAGCACAATGGGTCAGA...TTTCCAAACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTACAAGAGCTCTTGTCTaGCCCATTGTGCTGAGCCAA | + |
Preference number: 4 (lower is better) Translates to: GRKPEASNKGTLTHTIQPTRALV*PIVLSQ Trigger: TTGGCTCAGCACAATGGGTCAGACAAGAGCTCTTGT...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCTGTGAGTTCGAGAGACAGCTTTTCTCTTaGTTGAGTCGAATTATCTCC | + |
Preference number: 4 (lower is better) Translates to: PLIPALRRQKQADFCEFERQLFS*LSRIIS Trigger: GGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCT...CTCGAACTCACAGAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTACACACTGGGAAGGCTaGATGCCAATGAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: FVYRASSRTARATQRHPVTHWEG*MPMSSL Trigger: AAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGT...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAGGTGCTTCCGAGAGGAGGGTaGAGTGTGTGGCCTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VLKAAFVGITVLFTYLQVLPRGG*SVWPSE Trigger: CTCAGAAGGCCACACACTCCACCCTCCTCTCGGAAG...CACCTGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | ACCACAAGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTCTTCCGAGAGGAGGGTaGAGTGTGTGGCCTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: TTSLSQPGIYRCYRYFKPLPRGG*SVWPSE Trigger: CTCAGAAGGCCACACACTCCACCCTCCTCTCGGAAG...AGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACTTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGGCTGTTTTGAGCAGCTaGAAAGGCCCAGGTAGACGT | + |
Preference number: 4 (lower is better) Translates to: IKQWISDPVLPCFFQWSMAVLSS*KGPGRR Trigger: ACGTCTACCTGGGCCTTTCCAGCTGCTCAAAACAGC...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | ATGAGCCCATCAGACAGAGTAGGAAAAGTTTACTATCTGGATTCTCAGTTTGGACTGCGACCATGTCATTaGGCTCCTTATCGCGGTCTT | + |
Preference number: 4 (lower is better) Translates to: MSPSDRVGKVYYLDSQFGLRPCH*APYRGL Trigger: AAGACCGCGATAAGGAGCTCAATGACATGGTCGCAG...TCCAAACTGAGAATCCAGATAGTAAACTTTTCCTACTCTGTCTGATGGGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CTGTTAAAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCTGGACTCCAGGGTCTTaGCCTTCTTCATCAGTGACT | + |
Preference number: 4 (lower is better) Translates to: LLKGFCILTAWLLSFPFSWTPGS*PSSSVT Trigger: AGTCACTGATGAAGAAGGTCAAGACCCTGGAGTCCA...GCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | GCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTGTCTGGCACTCTGCTTaGTTGGACTCCAGGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: AFVLKAAFVGITVLFTYLVWHSA*LDSRVL Trigger: CAAGACCCTGGAGTCCAATCAAGCAGAGTGCCAGAC...AAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR TCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTGCAATTGTCCTACCTaGGCAGAGAGGTCCACTAAC | + |
Preference number: 4 (lower is better) Translates to: IKQWISDPVLPCFFQWSMCNCPT*AERSTN Trigger: GTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CTGTTAAAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCTCTGACCCATTGTGCTaGGCCAACATGACCTCAAAC | + |
Preference number: 4 (lower is better) Translates to: LLKGFCILTAWLLSFPFSSDPLC*ANMTSN Trigger: GTTTGAGGTCATGTTGGCTCAGCACAATGGGTCAGA...GCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCGTGCTCTGGAAGGCTTaGAAATATTCATCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: HENHLGRKPEASNKGTLTVLWKA*KYSSTL Trigger: CAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCAC...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTTGCGCTGACACTTCTTaGACAAGTGCACATGGTTTT | + |
Preference number: 4 (lower is better) Translates to: GRKPEASNKGTLTHTIQPCADTS*TSAHGF Trigger: AAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGCA...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | AAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTGCCTCTGATGCACTaGGACCATGTCATTGAGCTC | + |
Preference number: 4 (lower is better) Translates to: KGFCILTAWLLSFPFSVFLPLMH*DHVIEL Trigger: GAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAG...AAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CCTTGCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTACTGCCTCTGATGCACTaGGACCATGTCATTGAGCTC | + |
Preference number: 4 (lower is better) Translates to: PCLCIKGCFCGNHSPLYLLPLMH*DHVIEL Trigger: GAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAG...TAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGGCGACACTTCTTGAACAAGTaGACATGGTTTTGTGGCGAA | + |
Preference number: 4 (lower is better) Translates to: STLLFPMEHVIGVPVGRRHFLNK*TWFCGE Trigger: TTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTG...TCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTGACCTTCTTCATCAGTaGCTTGATTATGTCAGTCCT | + |
Preference number: 4 (lower is better) Translates to: FVYRASSRTARATQRHPVDLLHQ*LDYVSP Trigger: AGGACTGACATAATCAAGTCACTGATGAAGAAGGTC...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CTGTTAAAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCATAAACACATGTCCTTaGTGCACTCCAGGGCCTTTG | + |
Preference number: 4 (lower is better) Translates to: LLKGFCILTAWLLSFPFSINTCP*CTPGPL Trigger: CAAAGGCCCTGGAGTGCAGCAAGGACATGTGTTTAT...GCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CCAAGTATTTATAGAGTGTGCCAGCCTCACCCTCATTACAAACGTGAGCTCAACGCGAACAATCCTTTGTaGTCTGGAAGGCTTGAAAAT | + |
Preference number: 4 (lower is better) Translates to: PSIYRVCQPHPHYKRELNANNPL*SGRLEN Trigger: ATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGC...GTTGAGCTCACGTTTGTAATGAGGGTGAGGCTGGCACACTCTATAAATACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CCTTGCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTAACACACTGGGAAGGCTaGATGCCAATGAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: PCLCIKGCFCGNHSPLYLTHWEG*MPMSSL Trigger: AAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGT...TAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATACAACCTATCTGTCTCAGATTCTaGAGCTCGGAATTTGTACGA | + |
Preference number: 4 (lower is better) Translates to: GRKPEASNKGTLTHTIQPICLRF*SSEFVR Trigger: TCGTACAAATTCCGAGCTCCAGAATCTGAGACAGAT...AGGTTGTATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CAA 72 bp | GATACTCCCAGGAAGCTGTTAAAAGGTTTCTGCATCTaGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTA | + |
Preference number: 4 (lower is better) Translates to: DTPRKLLKGFCI*TAWLLSFPFSV Trigger: TACGCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAGCTTCCTGGGAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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3UTR CAA 72 bp | AGAAGAAAGACTGTGTCACGTACCGGAAGCTGGCTTTaGGGAAATGGTGGTTATGATGTGAATATGCACAGA | + |
Preference number: 4 (lower is better) Translates to: RRKTVSRTGSWL*GNGGYDVNMHR Trigger: TCTGTGCATATTCACATCATAACCACCATTTCCCAAAAGCCAGCTTCCGGTACGTGACACAGTCTTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTAGGGTGCGCTGACACTTCTTaGACAAGTGCACATGGTTTT | + |
Preference number: 4 (lower is better) Translates to: WLLSFPFSVFLNAEVEVGCADTS*TSAHGF Trigger: AAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGCA...CCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGACAGCTTTTCTCTTaGTTGAGTCGAATTATCTCC | + |
Preference number: 4 (lower is better) Translates to: SCSTLLFPMEHVIGVPVGRQLFS*LSRIIS Trigger: GGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCT...GCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGAACAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | ATGAGCCCATCAGACAGAGTAGGAAAAGTTTACTATCTGGATTCTCAGTTTGGAATAAACACATGTCCTTaGTGCACTCCAGGGCCTTTG | + |
Preference number: 4 (lower is better) Translates to: MSPSDRVGKVYYLDSQFGINTCP*CTPGPL Trigger: CAAAGGCCCTGGAGTGCAGCAAGGACATGTGTTTAT...TCCAAACTGAGAATCCAGATAGTAAACTTTTCCTACTCTGTCTGATGGGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTAGGGGTAGCTTCTTCTCTCTaGAAGCATCACAAGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: WLLSFPFSVFLNAEVEVGVASSL*KHHKSS Trigger: AGAGCTCTTGTGATGCTTGCAGAGAGAAGAAGCTAC...CCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGGTAGCTTCTTCTCTCTaGAAGCATCACAAGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: IKQWISDPVLPCFFQWSMVASSL*KHHKSS Trigger: AGAGCTCTTGTGATGCTTGCAGAGAGAAGAAGCTAC...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | GCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTATGATGTTACTTGGGTaGCAGCACTTGGACTCGGAC | + |
Preference number: 4 (lower is better) Translates to: AFVLKAAFVGITVLFTYLMMLLG*QHLDSD Trigger: GTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCAT...AAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | ATGAGCCCATCAGACAGAGTAGGAAAAGTTTACTATCTGGATTCTCAGTTTGGAGATGATGATGTTACTTaGGTGGCAGCACTTGGACTC | + |
Preference number: 4 (lower is better) Translates to: MSPSDRVGKVYYLDSQFGDDDVT*VAALGL Trigger: GAGTCCAAGTGCTGCCACCCAAGTAACATCATCATC...TCCAAACTGAGAATCCAGATAGTAAACTTTTCCTACTCTGTCTGATGGGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | TGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTAGGGAGCTTTTCTCTTGCTTaGGTCGAATTATCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: WLLSFPFSVFLNAEVEVGSFSLA*VELSPL Trigger: GAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCT...CCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | ACCACAAGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTATCCTTTTCATTGGCTaGGGTTCTTCTGTCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: TTSLSQPGIYRCYRYFKPILFIG*GSSVRK Trigger: CTTCCTGACAGAAGAACCTCAGCCAATGAAAAGGAT...AGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | TCTCTGCCTTCCAAAGACAATTCTGTTTGCATAGCCTCAGTGAATGTCCAAGTTGCGAACAATCCTTTGTaGTCTGGAAGGCTTGAAAAT | + |
Preference number: 4 (lower is better) Translates to: SLPSKDNSVCIASVNVQVANNPL*SGRLEN Trigger: ATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGC...AACTTGGACATTCACTGAGGCTATGCAAACAGAATTGTCTTTGGAAGGCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165148.4 |
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CDS-3UTR GCA 90 bp | CTGTTAAAAGGTTTCTGCATCTTGACAGCTTGGCTTTTGTCTTTCCCTTTCAGCCACTTCTTGAACAAGTaGACATGGTTTTGTGGCGAA | + |
Preference number: 4 (lower is better) Translates to: LLKGFCILTAWLLSFPFSHFLNK*TWFCGE Trigger: TTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTG...GCTGAAAGGGAAAGACAAAAGCCAAGCTGTCAAGATGCAGAAACCTTTTAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CTTTTGGGAAATGGTGGTTATGATGTGAATATGCACAGAGACTGTAAGGATAAGGTGCTCTGGAAGGCTTaGAAATATTCATCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: LLGNGGYDVNMHRDCKDKVLWKA*KYSSTL Trigger: CAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCAC...CTTATCCTTACAGTCTCTGTGCATATTCACATCATAACCACCATTTCCCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CCA 90 bp | CTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAGATGATGATGTTACTTaGGTGGCAGCACTTGGACTC | + |
Preference number: 4 (lower is better) Translates to: LCIKGCFCGNHSPLYLSSDDDVT*VAALGL Trigger: GAGTCCAAGTGCTGCCACCCAAGTAACATCATCATC...TGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | ACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAATATATTTCATTGCGCTaGCACTTCTTGAACAAGTGC | + |
Preference number: 4 (lower is better) Translates to: TAWLLSFPFSVFLNAEVEYISLR*HFLNKC Trigger: GCACTTGTTCAAGAAGTGTCAGCGCAATGAAATATA...TTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR TCA 90 bp | CTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAATCCTTTTCATTGGCTaGGGTTCTTCTGTCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: LCIKGCFCGNHSPLYLSSILFIG*GSSVRK Trigger: CTTCCTGACAGAAGAACCTCAGCCAATGAAAAGGAT...TGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | CAGCTGATGGGTAGCAGCGTGCTCAGCTCCAGATCCGTGACCATCTaGCGGGACTCGGCCAGCAGCCGCTGGAGCTTACTCGTAGGAGAG | + |
Preference number: 5 (lower is better) Translates to: QLMGSSVLSSRSVTI*RDSASSRWSLLVGE Trigger: CTCTCCTACGAGTAAGCTCCAGCGGCTGCTGGCCGAGTCCCGGCAGATGGTCACGGATCTGGAGCTGAGCACGCTGCTACCCATCAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 90 bp | CTGATCCGATGTTCTGGCGCCGGTATAAGGTCGCCGAAGGGTTCATaGATGACTCCCCCGCCCCCAGAGAGAGTTGGTGCCAGCAGCGGG | + |
Preference number: 5 (lower is better) Translates to: LIRCSGAGIRSPKGS*MTPPPPERVGASSG Trigger: CCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCTTATACCGGCGCCAGAACATCGGATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | GTTTGTAAGGCTGGGCATGGTGACATACAGGTGGTAGACTCCTGTCATCCCAGCCGCCCCCAGAGAGAGTaGGTGCCAGCAGCGGGTCAC | + |
Preference number: 5 (lower is better) Translates to: VCKAGHGDIQVVDSCHPSRPQRE*VPAAGH Trigger: GTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCG...GCTGGGATGACAGGAGTCTACCACCTGTATGTCACCATGCCCAGCCTTACAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TGGCAGTGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCATGTCTGGCACTCTGCTaGATTGGACTCCAGGGTCTT | + |
Preference number: 5 (lower is better) Translates to: WQCWRTPLIPALRRQKQACLALC*IGLQGL Trigger: AAGACCCTGGAGTCCAATCAAGCAGAGTGCCAGACA...TGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCACTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CTGGGCGCCTCGCTTGGCTGGTTCAGGATCAGCTCTGCATTCTTAGTCTGGCTCCACGTCTCCGCCATCTaGGCATCACGTAAAGCGTGC | + |
Preference number: 5 (lower is better) Translates to: LGASLGWFRISSAFLVWLHVSAI*ASRKAC Trigger: GCACGCTTTACGTGATGCCAAGATGGCGGAGACGTG...GAGCCAGACTAAGAATGCAGAGCTGATCCTGAACCAGCCAAGCGAGGCGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | TTTCTGCCGGTCCTCTTCCCAGGAGAGAAGCTGCCTCTGATGCACTaGGACCATGTCATTGAGCTCCTTATCGCGGTCTTTCAGCTCCCC | + |
Preference number: 5 (lower is better) Translates to: FLPVLFPGEKLPLMH*DHVIELLIAVFQLP Trigger: GGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCTTCTCTCCTGGGAAGAGGACCGGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | TGCCACTGCTTCTCGTCAGACAGCGAGACGGAGGTTTCCGAGAGCTaGTTCTCTTCCGTTGGAAGCCCCACTCCATCGCATTTTGGTGAC | + |
Preference number: 5 (lower is better) Translates to: CHCFSSDSETEVSES*FSSVGSPTPSHFGD Trigger: GTCACCAAAATGCGATGGAGTGGGGCTTCCAACGGAAGAGAAGCAGCTCTCGGAAACCTCCGTCTCGCTGTCTGACGAGAAGCAGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | GTCAGCACTTTCTGCCGGTCCTCTTCCCAGGAGAGAAGCTGCCTCTaGTGCACTGCGACCATGTCATTGAGCTCCTTATCGCGGTCTTTC | + |
Preference number: 5 (lower is better) Translates to: VSTFCRSSSQERSCL*CTATMSLSSLSRSF Trigger: GAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCTTCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | GCCTGTCTGGCTGTTTTGAGCAGCTGGAAAGGCCCAGGTAGACGTTaGTGTCATGCCACTGCTTCTCGTCAGACAGCGAGACGGAGGTTT | + |
Preference number: 5 (lower is better) Translates to: ACLAVLSSWKGPGRR*CHATASRQTARRRF Trigger: AAACCTCCGTCTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAACGTCTACCTGGGCCTTTCCAGCTGCTCAAAACAGCCAGACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | TGGACTCGGACAGGTCATTGTCACCTATACAGACTACATTTGGGGTaGAGCAGGAGACCTCAGATGTTCCTGTGCGGTCGTGGCCATCCC | + |
Preference number: 5 (lower is better) Translates to: WTRTGHCHLYRLHLG*SRRPQMFLCGRGHP Trigger: GGGATGGCCACGACCGCACAGGAACATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 90 bp | GCACTTGGACTCGGACAGGTCATTGTCACCTATACAGACTACATTTaGGGTGCAGCAGGAGACCTCAGATGTTCCTGTGCGGTCGTGGCC | + |
Preference number: 5 (lower is better) Translates to: ALGLGQVIVTYTDYI*GAAGDLRCSCAVVA Trigger: GGCCACGACCGCACAGGAACATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TGCTGGCGCACGCCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCGATAAACACATGTCCTaGCTGCACTCCAGGGCCTTT | + |
Preference number: 5 (lower is better) Translates to: CWRTPLIPALRRQKQADFDKHMS*LHSRAF Trigger: AAAGGCCCTGGAGTGCAGCAAGGACATGTGTTTATC...GAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGGCGTGCGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 90 bp | CGCTGCTTCTCAATAGTGGAAGTCTCAACTTCTGATCCGATGTTCTaGCGCCGGTATAAGGTCGCCGAAGGGTTCATGGATGACTCCCCC | + |
Preference number: 5 (lower is better) Translates to: RCFSIVEVSTSDPMF*RRYKVAEGFMDDSP Trigger: GGGGGAGTCATCCATGAACCCTTCGGCGACCTTATACCGGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGCGCCCCCAGAGAGAGTaGGTGCCAGCAGCGGGTCAC | + |
Preference number: 5 (lower is better) Translates to: IKQWISDPVLPCFFQWSMRPQRE*VPAAGH Trigger: GTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCG...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | GTCTTGACCTTCTTCATCAGTGACTTGATTATGTCAGTCCTTTTATaGAGCTCACCTTCGAGCTTGCTGCAGCGCTCCTCCAGGGTCAGC | + |
Preference number: 5 (lower is better) Translates to: VLTFFISDLIMSVLL*SSPSSLLQRSSRVS Trigger: GCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGCATAAAAGGACTGACATAATCAAGTCACTGATGAAGAAGGTCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTCACGTCTCCGCCATCTaGGCATCACGTAAAGCGTGC | + |
Preference number: 5 (lower is better) Translates to: FVYRASSRTARATQRHPVHVSAI*ASRKAC Trigger: GCACGCTTTACGTGATGCCAAGATGGCGGAGACGTG...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | TCATTGAGCTCCTTATCGCGGTCTTTCAGCTCCCCGATGAGCAGCTaGAGTTCCTTCCGCTGCTTCTCAATAGTGGAAGTCTCAACTTCT | + |
Preference number: 5 (lower is better) Translates to: SLSSLSRSFSSPMSS*SSFRCFSIVEVSTS Trigger: AGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTTCAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
||
CDS-3UTR CAA 90 bp | TCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGGCGACTCTCTAGCTTGCAATaGTCCTACCTGAGCAGAGAG | + |
Preference number: 5 (lower is better) Translates to: STLLFPMEHVIGVPVGRRLSSLQ*SYLSRE Trigger: CTCTCTGCTCAGGTAGGACAATTGCAAGCTAGAGAG...TCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCAGGCGAGATAAACACATGTCCTaGCTGCACTCCAGGGCCTTT | + |
Preference number: 5 (lower is better) Translates to: STLLFPMEHVIGVPVGRRDKHMS*LHSRAF Trigger: AAAGGCCCTGGAGTGCAGCAAGGACATGTGTTTATC...TCGCCTGCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CATGAAAATCATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCTTGGACTCCAGGGTCTaGACCTTCTTCATCAGTGAC | + |
Preference number: 5 (lower is better) Translates to: HENHLGRKPEASNKGTLTLDSRV*TFFISD Trigger: GTCACTGATGAAGAAGGTCAAGACCCTGGAGTCCAA...GGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATGATTTTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CCTTTGATCCCAGCCCTCAGGAGGCAGAAGCAAGCAGATTTCTGTGAGTTCGAGTCCTCTCGTTGTTCATaGTTTTCTGTTGTCTTCTCA | + |
Preference number: 5 (lower is better) Translates to: PLIPALRRQKQADFCEFESSRCS*FSVVFS Trigger: TGAGAAGACAACAGAAAACAATGAACAACGAGAGGA...CTCGAACTCACAGAAATCTGCTTGCTTCTGCCTCCTGAGGGCTGGGATCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CTACTACAGAGCCAGGCAAGGTACAGCTGTCTCCTGAGGACAGACAGCCTTAACTCTGAGACTTCTAATTaGCTTCTGTTGAGATTCTCG | + |
Preference number: 5 (lower is better) Translates to: LLQSQARYSCLLRTDSLNSETSN*LLLRFS Trigger: CGAGAATCTCAACAGAAGCAAATTAGAAGTCTCAGA...GTTAAGGCTGTCTGTCCTCAGGAGACAGCTGTACCTTGCCTGGCTCTGTAGTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | ATCATGGTAGTGAGAGCCTGCTCTCTAGCTTGCAATTGTCCTACCTaGGCAGAGAGGTCCACTAACGTGCTGCTGAGATTTTCATTTCTA | + |
Preference number: 5 (lower is better) Translates to: IMVVRACSLACNCPT*AERSTNVLLRFSFL Trigger: TAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCAAGCTAGAGAGCAGGCTCTCACTACCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 90 bp | GGAAGGCTTGAAAATATTCATCCACTCTGTATCAGTCATATGTCCTaGGGCTTCGATGATGATGTTACTTGGGTGGCAGCACTTGGACTC | + |
Preference number: 5 (lower is better) Translates to: GRLENIHPLCISHMS*GFDDDVTWVAALGL Trigger: GAGTCCAAGTGCTGCCACCCAAGTAACATCATCATCGAAGCCCCAGGACATATGACTGATACAGAGTGGATGAATATTTTCAAGCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 90 bp | TCTTCTCTTTCAGCAGACTTTAAGGAACCCACACACTGGGAAGGCTaGATGCCAATGAGCTCACTTGCTGAGGAATTATATTTCATTGCG | + |
Preference number: 5 (lower is better) Translates to: SSLSADFKEPTHWEG*MPMSSLAEELYFIA Trigger: CGCAATGAAATATAATTCCTCAGCAAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGTGGGTTCCTTAAAGTCTGCTGAAAGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCTGTGCTCTGGAAGGCTaGAAAATATTCATCCACTCT | + |
Preference number: 5 (lower is better) Translates to: SCSTLLFPMEHVIGVPVGCALEG*KIFIHS Trigger: AGAGTGGATGAATATTTTCAAGCCTTCCAGAGCACA...GCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGAACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TTTGTCTATAGAGCTAGTTCCAGGACAGCCAGAGCTACACAAAGACACCCTGTTTCTAATTTGCTTCTGTaGAGATTCTCGCAGCTGATG | + |
Preference number: 5 (lower is better) Translates to: FVYRASSRTARATQRHPVSNLLL*RFSQLM Trigger: CATCAGCTGCGAGAATCTCAACAGAAGCAAATTAGA...AACAGGGTGTCTTTGTGTAGCTCTGGCTGTCCTGGAACTAGCTCTATAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGTAATTGGTGTTCCTGTTGGCTCTAATTTGCTTCTGTaGAGATTCTCGCAGCTGATG | + |
Preference number: 5 (lower is better) Translates to: SCSTLLFPMEHVIGVPVGSNLLL*RFSQLM Trigger: CATCAGCTGCGAGAATCTCAACAGAAGCAAATTAGA...GCCAACAGGAACACCAATTACATGCTCCATTGGAAAAAGCAGGGTAGAACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CTTTTGGGAAATGGTGGTTATGATGTGAATATGCACAGAGACTGTAAGGATAAGTTGGACTCCAGGGTCTaGACCTTCTTCATCAGTGAC | + |
Preference number: 5 (lower is better) Translates to: LLGNGGYDVNMHRDCKDKLDSRV*TFFISD Trigger: GTCACTGATGAAGAAGGTCAAGACCCTGGAGTCCAA...CTTATCCTTACAGTCTCTGTGCATATTCACATCATAACCACCATTTCCCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTAGGGTCTGGAGCTCGGAATTaGTACGATCTTGCTTTGACT | + |
Preference number: 5 (lower is better) Translates to: WLLSFPFSVFLNAEVEVGSGARN*YDLALT Trigger: AGTCAAAGCAAGATCGTACAAATTCCGAGCTCCAGA...CCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TCTCTGCCTTCCAAAGACAATTCTGTTTGCATAGCCTCAGTGAATGTCCAAGTTTTGCATAGGGTAACTTaGTTTTCCGGTTCAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: SLPSKDNSVCIASVNVQVLHRVT*FSGSVW Trigger: CCAGACTGAACCGGAAAACAAAGTTACCCTATGCAA...AACTTGGACATTCACTGAGGCTATGCAAACAGAATTGTCTTTGGAAGGCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | AGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTATGAAACTCTCTAGCTTGCAATaGTCCTACCTGAGCAGAGAG | + |
Preference number: 5 (lower is better) Translates to: SLSQPGIYRCYRYFKPMKLSSLQ*SYLSRE Trigger: CTCTCTGCTCAGGTAGGACAATTGCAAGCTAGAGAG...TTTCATAGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CATCTGGGAAGAAAGCCTGAAGCCTCGAACAAAGGGACATTGACCCATACAATAGCCTCAATAATGTCTTaGTCCTTTAGCTTTATCATG | + |
Preference number: 5 (lower is better) Translates to: HLGRKPEASNKGTLTHTIASIMS*SFSFIM Trigger: CATGATAAAGCTAAAGGACAAAGACATTATTGAGGC...TATTGTATGGGTCAATGTCCCTTTGTTCGAGGCTTCAGGCTTTCTTCCCAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | GTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAGGTGTTGCATAGGGTAACTTaGTTTTCCGGTTCAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: VLKAAFVGITVLFTYLQVLHRVT*FSGSVW Trigger: CCAGACTGAACCGGAAAACAAAGTTACCCTATGCAA...CACCTGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGAAGTCATCCTTTTCATaGGCTGAGGTTCTTCTGTCA | + |
Preference number: 5 (lower is better) Translates to: IKQWISDPVLPCFFQWSMKSSFS*AEVLLS Trigger: TGACAGAAGAACCTCAGCCAATGAAAAGGATGACTT...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 90 bp | TATTTCATTGCGCTGACACTTCTTGAACAAGTGCACATGGTTTTGTaGCGAACAATCCTTTGTGCTCTGGAAGGCTTGAAAATATTCATC | + |
Preference number: 5 (lower is better) Translates to: YFIALTLLEQVHMVL*RTILCALEGLKIFI Trigger: GATGAATATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGCAATGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | GCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTTCTGGAGCTCGGAATTaGTACGATCTTGCTTTGACT | + |
Preference number: 5 (lower is better) Translates to: AFVLKAAFVGITVLFTYLSGARN*YDLALT Trigger: AGTCAAAGCAAGATCGTACAAATTCCGAGCTCCAGA...AAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | ATAAAACAGTGGATTTCCGATCCTGTTCTACCCTGCTTTTTCCAATGGAGCATGGACCAAGACTTTTGTTaGTCCAGTAAGTCTTTGGTA | + |
Preference number: 5 (lower is better) Translates to: IKQWISDPVLPCFFQWSMDQDFC*SSKSLV Trigger: TACCAAAGACTTACTGGACAAACAAAAGTCTTGGTC...CATGCTCCATTGGAAAAAGCAGGGTAGAACAGGATCGGAAATCCACTGTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | TGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGTAGGGTCTGAGACTTCTAATTaGCTTCTGTTGAGATTCTCG | + |
Preference number: 5 (lower is better) Translates to: WLLSFPFSVFLNAEVEVGSETSN*LLLRFS Trigger: CGAGAATCTCAACAGAAGCAAATTAGAAGTCTCAGA...CCCTACTTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | ACAGCTTGGCTTTTGTCTTTCCCTTTCAGCGTATTTCTAAACGCTGAAGTAGAAGCCTCAATAATGTCTTaGTCCTTTAGCTTTATCATG | + |
Preference number: 5 (lower is better) Translates to: TAWLLSFPFSVFLNAEVEASIMS*SFSFIM Trigger: CATGATAAAGCTAAAGGACAAAGACATTATTGAGGC...TTCTACTTCAGCGTTTAGAAATACGCTGAAAGGGAAAGACAAAAGCCAAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | GCCTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTTCCTCTCGTTGTTCATaGTTTTCTGTTGTCTTCTCA | + |
Preference number: 5 (lower is better) Translates to: AFVLKAAFVGITVLFTYLSSRCS*FSVVFS Trigger: TGAGAAGACAACAGAAAACAATGAACAACGAGAGGA...AAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | AGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTATGAAATGTGCTCTGGAAGGCTaGAAAATATTCATCCACTCT | + |
Preference number: 5 (lower is better) Translates to: SLSQPGIYRCYRYFKPMKCALEG*KIFIHS Trigger: AGAGTGGATGAATATTTTCAAGCCTTCCAGAGCACA...TTTCATAGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | AGTTTGAGCCAGCCTGGAATATATAGGTGCTATAGATATTTCAAGCCTATGAAAAAGTCATCCTTTTCATaGGCTGAGGTTCTTCTGTCA | + |
Preference number: 5 (lower is better) Translates to: SLSQPGIYRCYRYFKPMKKSSFS*AEVLLS Trigger: TGACAGAAGAACCTCAGCCAATGAAAAGGATGACTT...TTTCATAGGCTTGAAATATCTATAGCACCTATATATTCCAGGCTGGCTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | AAAGCGTGCTCTAACAATTTAAATTTACCCGAGCAGTCTGAAATGTaGTTGACGGCCTCAATAATGTCTTTGTCCTTTAGCTTTATCATG | + |
Preference number: 5 (lower is better) Translates to: KACSNNLNLPEQSEM*LTASIMSLSFSFIM Trigger: CATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTTCAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS-3UTR CAA 90 bp | CTTTGTATTAAAGGCTGCTTTTGTGGGAATCACAGTCCTCTTTACTTATCTTCAGACCAAGACTTTTGTTaGTCCAGTAAGTCTTTGGTA | + |
Preference number: 5 (lower is better) Translates to: LCIKGCFCGNHSPLYLSSDQDFC*SSKSLV Trigger: TACCAAAGACTTACTGGACAAACAAAAGTCTTGGTC...TGAAGATAAGTAAAGAGGACTGTGATTCCCACAAAAGCAGCCTTTAATACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | GCCTTTGGTTCCTCCATCTTTAAGCCATGTATTTGTATTAATTCCTaGGAACTTTCTATATTGAAATTAAGAAACTGCAGGTCACTCTGC | + |
Preference number: 5 (lower is better) Translates to: AFGSSIFKPCICINS*ELSILKLRNCRSLC Trigger: GCAGAGTGACCTGCAGTTTCTTAATTTCAATATAGAAAGTTCTCAGGAATTAATACAAATACATGGCTTAAAGATGGAGGAACCAAAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 90 bp | ATTGTGCTGAGCCAACATGACCTCAAACGTTTGATCTTTAACCAATaGCTTCTGATTTCTCTCTCTTTTAATATCGATTTTTGGGTAGTT | + |
Preference number: 5 (lower is better) Translates to: IVLSQHDLKRLIFNQ*LLISLSFNIDFWVV Trigger: AACTACCCAAAAATCGATATTAAAAGAGAGAGAAATCAGAAGTCATTGGTTAAAGATCAAACGTTTGAGGTCATGTTGGCTCAGCACAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | GGTAGCAGCGTGCTCAGCTCCAGATCCGTGACCATCTaGCGGGACTCGGCCAGCAGCCGCTGGAGCTTACTC | + |
Preference number: 6 (lower is better) Translates to: GSSVLSSRSVTI*RDSASSRWSLL Trigger: GAGTAAGCTCCAGCGGCTGCTGGCCGAGTCCCGGCAGATGGTCACGGATCTGGAGCTGAGCACGCTGCTACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | CATTTGGGGTGCAGCAGGAGACCTCAGATGTTCCTGTaGGGTCGTGGCCATCCCCGTCCAGCCTGTCTGGCT | + |
Preference number: 6 (lower is better) Translates to: HLGCSRRPQMFL*GRGHPRPACLA Trigger: AGCCAGACAGGCTGGACGGGGATGGCCACGACCGCACAGGAACATCTGAGGTCTCCTGCTGCACCCCAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | TGTTCTGGCGCCGGTATAAGGTCGCCGAAGGGTTCATaGATGACTCCCCCGCCCCCAGAGAGAGTTGGTGCC | + |
Preference number: 6 (lower is better) Translates to: CSGAGIRSPKGS*MTPPPPERVGA Trigger: GGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCTTATACCGGCGCCAGAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | GTGCAGCAGGAGACCTCAGATGTTCCTGTGCGGTCGTaGCCATCCCCGTCCAGCCTGTCTGGCTGTTTTGAG | + |
Preference number: 6 (lower is better) Translates to: VQQETSDVPVRS*PSPSSLSGCFE Trigger: CTCAAAACAGCCAGACAGGCTGGACGGGGATGGCCACGACCGCACAGGAACATCTGAGGTCTCCTGCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | TGTCAGTCCTTTTATGCAGCTCACCTTCGAGCTTGCTaGAGCGCTCCTCCAGGGTCAGCACTTTCTGCCGGT | + |
Preference number: 6 (lower is better) Translates to: CQSFYAAHLRAC*SAPPGSALSAG Trigger: ACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGCATAAAAGGACTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | GCGAGACGGAGGTTTCCGAGAGCTGCTTCTCTTCCGTaGGAAGCCCCACTCCATCGCATTTTGGTGACTTTG | + |
Preference number: 6 (lower is better) Translates to: ARRRFPRAASLP*EAPLHRILVTL Trigger: CAAAGTCACCAAAATGCGATGGAGTGGGGCTTCCAACGGAAGAGAAGCAGCTCTCGGAAACCTCCGTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | AGCACTTGGACTCGGACAGGTCATTGTCACCTATACAGACTACATTaGGGGTGCAGCAGGAGACCTCAGATGTTCCTGTGCGGTCGTGGC | + |
Preference number: 6 (lower is better) Translates to: STWTRTGHCHLYRLH*GCSRRPQMFLCGRG Trigger: GCCACGACCGCACAGGAACATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 72 bp | GCTGTTTTGAGCAGCTGGAAAGGCCCAGGTAGACGTTaGTGTCATGCCACTGCTTCTCGTCAGACAGCGAGA | + |
Preference number: 6 (lower is better) Translates to: AVLSSWKGPGRR*CHATASRQTAR Trigger: TCTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAACGTCTACCTGGGCCTTTCCAGCTGCTCAAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | GTCCTCTTCCCAGGAGAGAAGCTGCCTCTGATGCACTaGGACCATGTCATTGAGCTCCTTATCGCGGTCTTT | + |
Preference number: 6 (lower is better) Translates to: VLFPGEKLPLMH*DHVIELLIAVF Trigger: AAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCTTCTCTCCTGGGAAGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | TTATGTCAGTCCTTTTATGCAGCTCACCTTCGAGCTTaGTGCAGCGCTCCTCCAGGGTCAGCACTTTCTGCC | + |
Preference number: 6 (lower is better) Translates to: LCQSFYAAHLRA*CSAPPGSALSA Trigger: GGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGCATAAAAGGACTGACATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | AGTGACTTGATTATGTCAGTCCTTTTATGCAGCTCACCTTCGAGCTaGCTGCAGCGCTCCTCCAGGGTCAGCACTTTCTGCCGGTCCTCT | + |
Preference number: 6 (lower is better) Translates to: SDLIMSVLLCSSPSS*LQRSSRVSTFCRSS Trigger: AGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGCATAAAAGGACTGACATAATCAAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | AGCAGCCGCTGGAGCTTACTCGTAGGAGAGAAGTCATCCTTTTCATaGGCTGAGGTTCTTCTGTCAGGAAGGGCCGCTGACTCCTCTTCT | + |
Preference number: 6 (lower is better) Translates to: SSRWSLLVGEKSSFS*AEVLLSGRAADSSS Trigger: AGAAGAGGAGTCAGCGGCCCTTCCTGACAGAAGAACCTCAGCCAATGAAAAGGATGACTTCTCTCCTACGAGTAAGCTCCAGCGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | CTGCTGCTGCGTCTTCTGAAGAGCTGTCTGGCACTCTaGTTGATTGGACTCCAGGGTCTTGACCTTCTTCAT | + |
Preference number: 6 (lower is better) Translates to: LLLRLLKSCLAL*LIGLQGLDLLH Trigger: ATGAAGAAGGTCAAGACCCTGGAGTCCAATCAAGCAGAGTGCCAGACAGCTCTTCAGAAGACGCAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | CTGCTGCGTCTTCTGAAGAGCTGTCTGGCACTCTGCTaGATTGGACTCCAGGGTCTTGACCTTCTTCATCAG | + |
Preference number: 6 (lower is better) Translates to: LLRLLKSCLALC*IGLQGLDLLHQ Trigger: CTGATGAAGAAGGTCAAGACCCTGGAGTCCAATCAAGCAGAGTGCCAGACAGCTCTTCAGAAGACGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 72 bp | GTGAGAGCCTGCTCTCTAGCTTGCAATTGTCCTACCTaGGCAGAGAGGTCCACTAACGTGCTGCTGAGATTT | + |
Preference number: 6 (lower is better) Translates to: VRACSLACNCPT*AERSTNVLLRF Trigger: AAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCAAGCTAGAGAGCAGGCTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | AGTCATATGTCCTGGGGCTTCGATGATGATGTTACTTaGGTGGCAGCACTTGGACTCGGACAGGTCATTGTC | + |
Preference number: 6 (lower is better) Translates to: SHMSWGFDDDVT*VAALGLGQVIV Trigger: GACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCATCATCGAAGCCCCAGGACATATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | ACTCGGACAGGTCATTGTCACCTATACAGACTACATTaGGGGTGCAGCAGGAGACCTCAGATGTTCCTGTGC | + |
Preference number: 6 (lower is better) Translates to: TRTGHCHLYRLH*GCSRRPQMFLC Trigger: GCACAGGAACATCTGAGGTCTCCTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | TTACTTGGGTGGCAGCACTTGGACTCGGACAGGTCATaGTCACCTATACAGACTACATTTGGGGTGCAGCAG | + |
Preference number: 6 (lower is better) Translates to: LLGWQHLDSDRS*SPIQTTFGVQQ Trigger: CTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | GGGGCTTCGATGATGATGTTACTTGGGTGGCAGCACTaGGACTCGGACAGGTCATTGTCACCTATACAGACT | + |
Preference number: 6 (lower is better) Translates to: GASMMMLLGWQH*DSDRSLSPIQT Trigger: AGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCATCATCGAAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | ATGATGATGTTACTTGGGTGGCAGCACTTGGACTCGGACAGGTCATaGTCACCTATACAGACTACATTTGGGGTGCAGCAGGAGACCTCA | + |
Preference number: 6 (lower is better) Translates to: MMMLLGWQHLDSDRS*SPIQTTFGVQQETS Trigger: TGAGGTCTCCTGCTGCACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | TCAATAGTGGAAGTCTCAACTTCTGATCCGATGTTCTaGCGCCGGTATAAGGTCGCCGAAGGGTTCATGGAT | + |
Preference number: 6 (lower is better) Translates to: SIVEVSTSDPMF*RRYKVAEGFMD Trigger: ATCCATGAACCCTTCGGCGACCTTATACCGGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | ATATGTCCTGGGGCTTCGATGATGATGTTACTTGGGTGGCAGCACTaGGACTCGGACAGGTCATTGTCACCTATACAGACTACATTTGGG | + |
Preference number: 6 (lower is better) Translates to: ICPGASMMMLLGWQH*DSDRSLSPIQTTFG Trigger: CCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAAGTAACATCATCATCGAAGCCCCAGGACATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 72 bp | CTTCTTCTCTCTGCAAGCATCACAAGAGCTCTTGTCTaGCCCATTGTGCTGAGCCAACATGACCTCAAACGT | + |
Preference number: 6 (lower is better) Translates to: LLLSASITRALV*PIVLSQHDLKR Trigger: ACGTTTGAGGTCATGTTGGCTCAGCACAATGGGTCAGACAAGAGCTCTTGTGATGCTTGCAGAGAGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | TTCTTCATCAGTGACTTGATTATGTCAGTCCTTTTATaGAGCTCACCTTCGAGCTTGCTGCAGCGCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: FFISDLIMSVLL*SSPSSLLQRSS Trigger: GGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGCATAAAAGGACTGACATAATCAAGTCACTGATGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | TCAGCAGACTTTAAGGAACCCACACACTGGGAAGGCTaGATGCCAATGAGCTCACTTGCTGAGGAATTATAT | + |
Preference number: 6 (lower is better) Translates to: SADFKEPTHWEG*MPMSSLAEELY Trigger: ATATAATTCCTCAGCAAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGTGGGTTCCTTAAAGTCTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | GCGCTGACACTTCTTGAACAAGTGCACATGGTTTTGTaGCGAACAATCCTTTGTGCTCTGGAAGGCTTGAAA | + |
Preference number: 6 (lower is better) Translates to: ALTLLEQVHMVL*RTILCALEGLK Trigger: TTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | ATTGCGCTGACACTTCTTGAACAAGTGCACATGGTTTaGTGGCGAACAATCCTTTGTGCTCTGGAAGGCTTG | + |
Preference number: 6 (lower is better) Translates to: IALTLLEQVHMV*WRTILCALEGL Trigger: CAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | TTGGACTCCAGGGTCTTGACCTTCTTCATCAGTGACTaGATTATGTCAGTCCTTTTATGCAGCTCACCTTCG | + |
Preference number: 6 (lower is better) Translates to: LDSRVLTFFISD*IMSVLLCSSPS Trigger: CGAAGGTGAGCTGCATAAAAGGACTGACATAATCAAGTCACTGATGAAGAAGGTCAAGACCCTGGAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | TTTGGTGACTTTGCATGGACCTTGCATAGGGTAACTTaGTTTTCCGGTTCAGTCTGGATTTTCCCACCCAGA | + |
Preference number: 6 (lower is better) Translates to: FGDFAWTLHRVT*FSGSVWIFPPR Trigger: TCTGGGTGGGAAAATCCAGACTGAACCGGAAAACAAAGTTACCCTATGCAAGGTCCATGCAAAGTCACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CCA 72 bp | GAAAATATTCATCCACTCTGTATCAGTCATATGTCCTaGGGCTTCGATGATGATGTTACTTGGGTGGCAGCA | + |
Preference number: 6 (lower is better) Translates to: ENIHPLCISHMS*GFDDDVTWVAA Trigger: TGCTGCCACCCAAGTAACATCATCATCGAAGCCCCAGGACATATGACTGATACAGAGTGGATGAATATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | TCTTGCTTTTCTCTCACCACACACGTCTCCGCCATCTaGGCATCACGTAAAGCGTGCTCTAACAATTTAAAT | + |
Preference number: 6 (lower is better) Translates to: SCFSLTTHVSAI*ASRKACSNNLN Trigger: ATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTGAGAGAAAAGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | ACAAGTGCACATGGTTTTGTGGCGAACAATCCTTTGTaGTCTGGAAGGCTTGAAAATATTCATCCACTCTGT | + |
Preference number: 6 (lower is better) Translates to: TSAHGFVANNPL*SGRLENIHPLC Trigger: ACAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAACCATGTGCACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | TTTATTGACTTCAATCCTAAGTGCCTTCAATTTCTGCTTATAATCTaGCTTTTCTCTCACCACACACGTCTCCGCCATCTTGGCATCACG | + |
Preference number: 6 (lower is better) Translates to: FIDFNPKCLQFLLII*LFSHHTRLRHLGIT Trigger: CGTGATGCCAAGATGGCGGAGACGTGTGTGGTGAGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | TCCGGTTCAGTCTGGATTTTCCCACCCAGAGACCAAGACTTTTGTTaGTCCAGTAAGTCTTTGGTAAATAGAGATGAGAGAGCAATTACA | + |
Preference number: 6 (lower is better) Translates to: SGSVWIFPPRDQDFC*SSKSLVNRDERAIT Trigger: TGTAATTGCTCTCTCATCTCTATTTACCAAAGACTTACTGGACAAACAAAAGTCTTGGTCTCTGGGTGGGAAAATCCAGACTGAACCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 90 bp | TTATATTTCATTGCGCTGACACTTCTTGAACAAGTGCACATGGTTTaGTGGCGAACAATCCTTTGTGCTCTGGAAGGCTTGAAAATATTC | + |
Preference number: 6 (lower is better) Translates to: LYFIALTLLEQVHMV*WRTILCALEGLKIF Trigger: GAATATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAGTGTCAGCGCAATGAAATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | GTTTTGTGGCGAACAATCCTTTGTGCTCTGGAAGGCTaGAAAATATTCATCCACTCTGTATCAGTCATATGT | + |
Preference number: 6 (lower is better) Translates to: VLWRTILCALEG*KIFIHSVSVIC Trigger: ACATATGACTGATACAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCACAAAGGATTGTTCGCCACAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 72 bp | TCTAACAATTTAAATTTACCCGAGCAGTCTGAAATGTaGTTGACGGCCTCAATAATGTCTTTGTCCTTTAGC | + |
Preference number: 6 (lower is better) Translates to: SNNLNLPEQSEM*LTASIMSLSFS Trigger: GCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTTCAGACTGCTCGGGTAAATTTAAATTGTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS GCA 72 bp | GTAAAAATTAGCTCATCATGTAGACAGCTTTTCTCTTaGTTGAGTCGAATTATCTCCTCTCGTTGTTCATTG | + |
Preference number: 6 (lower is better) Translates to: VKISSSCRQLFS*LSRIISSRCSL Trigger: CAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATGATGAGCTAATTTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS TCA 72 bp | AAATTAGCTCATCATGTAGACAGCTTTTCTCTTGCTTaGGTCGAATTATCTCCTCTCGTTGTTCATTGTTTT | + |
Preference number: 6 (lower is better) Translates to: KLAHHVDSFSLA*VELSPLVVHCF Trigger: AAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATGATGAGCTAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |
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CDS CAA 72 bp | TTACATAAATCTGTCTCAGATTCTGGAGCTCGGAATTaGTACGATCTTGCTTTGACTTTGCAATATCAAGTA | + |
Preference number: 6 (lower is better) Translates to: LHKSVSDSGARN*YDLALTLQYQV Trigger: TACTTGATATTGCAAAGTCAAAGCAAGATCGTACAAATTCCGAGCTCCAGAATCTGAGACAGATTTATGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094320.10 ENSMUST00000165148.4 |