Pregenerated sensors for CCDC61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074358Ensembl transcript IDs: ENSMUST00000098780.10, ENSMUST00000133506.8, ENSMUST00000135467.8, ENSMUST00000139077.2, ENSMUST00000150065.8, ENSMUST00000206499.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGCTCTAGGCCCCTCACCAGCCCACGCAACGACTCGGCCTCCTaGCGTGCTGCCCGCCCCGCCAGAGCCTCCTCTCGGGAGCGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SSSRPLTSPRNDSAS*RAARPARASSRERP Trigger: GGGCCGCTCCCGAGAGGAGGCTCTGGCGGGGCGGGCAGCACGCCAGGAGGCCGAGTCGTTGCGTGGGCTGGTGAGGGGCCTAGAGCTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | CACGACCCCGGGCCCCACGGCTGCTCTCCCGTGATGAGGAGCGAGTaGCCGCGCGACCACGGGACGTGGAGCGCTCCCGAGACGATGAGG | + |
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Preference number: 1 (lower is better) Translates to: HDPGPHGCSPVMRSE*PRDHGTWSAPETMR Trigger: CCTCATCGTCTCGGGAGCGCTCCACGTCCCGTGGTCGCGCGGTCACTCGCTCCTCATCACGGGAGAGCAGCCGTGGGGCCCGGGGTCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 90 bp | TCCTGGCTGCGGCGGCCAGCAGCCCGACCCCCGAGGCCACGCTCCTaGCGTAACTCCAGCTCTAGGCCCCTCACCAGCCCACGCAACGAC | + |
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Preference number: 1 (lower is better) Translates to: SWLRRPAARPPRPRS*RNSSSRPLTSPRND Trigger: GTCGTTGCGTGGGCTGGTGAGGGGCCTAGAGCTGGAGTTACGGCAGGAGCGTGGCCTCGGGGGTCGGGCTGCTGGCCGCCGCAGCCAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | GCGAGTGACCGCGCGACCACGGGACGTGGAGCGCTCCCGAGACGATaGGGCTCGGCCCTCCCTGACTGCAACCGGCGGCAAGGTGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: ASDRATTGRGALPRR*GSALPDCNRRQGAS Trigger: AGACGCACCTTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCACGTCCCGTGGTCGCGCGGTCACTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | CACGGGACGTGGAGCGCTCCCGAGACGATGAGGCTCGGCCCTCCCTaGCTGCAACCGGCGGCAAGGTGCGTCTCATGGCCAGCTCGCTGT | + |
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Preference number: 1 (lower is better) Translates to: HGTWSAPETMRLGPP*LQPAARCVSWPARC Trigger: ACAGCGAGCTGGCCATGAGACGCACCTTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCACGTCCCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | ACTGCGTCCCCTCGGCCCGTCACAGCAGCAGCGGGCCGAGTCTGCTaGGACCATGAGACGGACGGACCGTCTCCGCTTCCTCCACTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: TASPRPVTAAAGRVC*DHETDGPSPLPPLP Trigger: GGGCAGTGGAGGAAGCGGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACTCGGCCCGCTGCTGCTGTGACGGGCCGAGGGGACGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | CCCTCGGCCCGTCACAGCAGCAGCGGGCCGAGTCTGCTGAGACCATaGGACGGACGGACCGTCTCCGCTTCCTCCACTGCCCATTCGGTT | + |
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Preference number: 1 (lower is better) Translates to: PSARHSSSGPSLLRP*DGRTVSASSTAHSV Trigger: AACCGAATGGGCAGTGGAGGAAGCGGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACTCGGCCCGCTGCTGCTGTGACGGGCCGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 90 bp | AGCTGTGCCTCCAGCTCCCGCTTCTCAGACGTCAAGCGGGTCACCTaGTCCCTCAGGTGCCAGATCTCCGTCTCCCGAGCATCCTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: SCASSSRFSDVKRVT*SLRCQISVSRASWP Trigger: CGGCCAGGATGCTCGGGAGACGGAGATCTGGCACCTGAGGGAGCAGGTGACCCGCTTGACGTCTGAGAAGCGGGAGCTGGAGGCACAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | CCGGCGGCAAGGTGCGTCTCATGGCCAGCTCGCTGTTCAGTGTCTTaGGCCTTGCACGCAGATTGCGCTCCGATGCCTTCACCTCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: PAARCVSWPARCSVS*ALHADCAPMPSPPR Trigger: TCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGACGCACCTTGCCGCCGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR CCA 90 bp | GGTGGTTTCCCTCGGCCACGGCAGCGGCGACTTCTGGAAACTGAGTaGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACTGACGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GGFPRPRQRRLLETE*EKSSSSLQELTDEQ Trigger: CTGCTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAAGTCGCCGCTGCCGTGGCCGAGGGAAACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | TTCTGGAAACTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTaGCTGACGAGCAGCGGCTGCGGAAACTGTCCACTGAGGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FWKLSGRNPPARCRS*LTSSGCGNCPLRSC Trigger: GCAGCTCCTCAGTGGACAGTTTCCGCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 90 bp | CTCGCTGTTCAGTGTCTTGAGCCTTGCACGCAGATTGCGCTCCGATaGCTTCACCTCCTCGAGCTCCTTAGCCAGTCGGCGACTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: LAVQCLEPCTQIALR*LHLLELLSQSATIL Trigger: CAGGATAGTCGCCGACTGGCTAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 90 bp | CAAGGTGCGTCTCATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTaGACGCAGATTGCGCTCCGATGCCTTCACCTCCTCGAGCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: QGASHGQLAVQCLEP*TQIALRCLHLLELL Trigger: AAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGACGCACCTTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | CTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACCCACTaGTGGTACAATGAGAAATCAGAATACCACCTCTCCAGGATCATG | + |
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Preference number: 1 (lower is better) Translates to: LAMSTGGALPPHQTH*WYNEKSEYHLSRIM Trigger: CATGATCCTGGAGAGGTGGTATTCTGATTTCTCATTGTACCATCAGTGGGTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR CCA 90 bp | ACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTaGGAGTCAGGGCCTCACACACTGAGACTCCAGGAGCACCTGGCG | + |
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Preference number: 1 (lower is better) Translates to: TKYTLSSPRMNYWER*ESGPHTLRLQEHLA Trigger: CGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGCCCTGACTCCCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR TCA 90 bp | ACTGATGGTACAATGAGAAATCAGAATACCACCTCTCCAGGATCATaGCCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGCCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: TDGTMRNQNTTSPGS*PRVQPVHVFLQSLQ Trigger: CTGAAGGCTTTGCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTGGAGAGGTGGTATTCTGATTTCTCATTGTACCATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCAGCCCGACCCCCGAGGCCACGCTCCTGCCGTAACTCCAGCTCTAGGCAATTACTGGGAGAGGTaGGAGTCAGGGCCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: GQQPDPRGHAPAVTPALGNYWER*ESGPHT Trigger: TGTGTGAGGCCCTGACTCCCACCTCTCCCAGTAATT...GCCTAGAGCTGGAGTTACGGCAGGAGCGTGGCCTCGGGGGTCGGGCTGCTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAACTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACTGACGAGAACGACTCGGCCTCCTaGCGTGCTGCCCGCCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: LETEWEKSSSSLQELTDENDSAS*RAARPA Trigger: GGCGGGGCGGGCAGCACGCCAGGAGGCCGAGTCGTT...CTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGGTTCCGGGAGCGGTTAACTGCGTCCCCTCGGCCCGTCACAGCAGCAGCCGGTTCATGTATTCCTaGAAAGCCTTCAGGCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AAVPGAVNCVPSARHSSSRFMYS*KAFRRA Trigger: TGCCCGCCTGAAGGCTTTGCAGGAATACATGAACCG...GCTGCTGCTGTGACGGGCCGAGGGGACGCAGTTAACCGCTCCCGGAACCGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGCGGTTCCGCTGCTGCTaGTGCTGCTTCATCCTGATT | + |
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Preference number: 2 (lower is better) Translates to: RLQEHLAMSTGGALPPHQRFRCC*CCFILI Trigger: AATCAGGATGAAGCAGCAGCAGCAGCAGCGGAACCG...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR CAA 90 bp | ACCGGCGGCAAGGTGCGTCTCATGGCCAGCTCGCTGTTCAGTGTCTaGAGCCTTGCACGCAGATTGCGCTCCGATGCCTTCACCTCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: TGGKVRLMASSLFSV*SLARRLRSDAFTSS Trigger: CGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGACGCACCTTGCCGCCGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAACTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACTGACGAGGGAGCGGCCCAGCTGTaGCTCCAGCTCCCGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LETEWEKSSSSLQELTDEGAAQL*LQLPLL Trigger: GAGAAGCGGGAGCTGGAGGCACAGCTGGGCCGCTCC...CTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR CAA 90 bp | CTCATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTGCACGCAGATaGCGCTCCGATGCCTTCACCTCCTCGAGCTCCTTAGCCAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: LMASSLFSVLSLARR*RSDAFTSSSSLASR Trigger: CCGACTGGCTAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR TCA 90 bp | ATACCACCTCTCCAGGATCATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCCAGGGCCTCACACACTaGGACTCCAGGAGCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: IPPLQDHDRVSSRFMYSCQGLTH*DSRSTW Trigger: CCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGCCCTG...GCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTGGAGAGGTGGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR-3UTR GCA 90 bp | ATACCACCTCTCCAGGATCATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCCTCCGCTTCCTCCACTaGCCATTCGGTTCCGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IPPLQDHDRVSSRFMYSCLRFLH*PFGSAA Trigger: AGCAGCGGAACCGAATGGGCAGTGGAGGAAGCGGAG...GCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTGGAGAGGTGGTAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAACTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACTGACGAGCGCTGCTGCTGCTGCTaGTTCATCCTGATTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LETEWEKSSSSLQELTDERCCCC*FILISL Trigger: GAGAGAAATCAGGATGAAGCAGCAGCAGCAGCAGCG...CTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR CCA 72 bp | AGGCCCCTCACCAGCCCACGCAACGACTCGGCCTCCTaGCGTGCTGCCCGCCCCGCCAGAGCCTCCTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: RPLTSPRNDSAS*RAARPARASSR Trigger: CCGAGAGGAGGCTCTGGCGGGGCGGGCAGCACGCCAGGAGGCCGAGTCGTTGCGTGGGCTGGTGAGGGGCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | GGGCCCCACGGCTGCTCTCCCGTGATGAGGAGCGAGTaGCCGCGCGACCACGGGACGTGGAGCGCTCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: GPHGCSPVMRSE*PRDHGTWSAPE Trigger: CTCGGGAGCGCTCCACGTCCCGTGGTCGCGCGGTCACTCGCTCCTCATCACGGGAGAGCAGCCGTGGGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 72 bp | CGGCGGCCAGCAGCCCGACCCCCGAGGCCACGCTCCTaGCGTAACTCCAGCTCTAGGCCCCTCACCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: RRPAARPPRPRS*RNSSSRPLTSP Trigger: TGGGCTGGTGAGGGGCCTAGAGCTGGAGTTACGGCAGGAGCGTGGCCTCGGGGGTCGGGCTGCTGGCCGCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | CGCGCGACCACGGGACGTGGAGCGCTCCCGAGACGATaGGGCTCGGCCCTCCCTGACTGCAACCGGCGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RATTGRGALPRR*GSALPDCNRRQ Trigger: TTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCACGTCCCGTGGTCGCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | TGGAGCGCTCCCGAGACGATGAGGCTCGGCCCTCCCTaGCTGCAACCGGCGGCAAGGTGCGTCTCATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: WSAPETMRLGPP*LQPAARCVSWP Trigger: TGGCCATGAGACGCACCTTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | CCTCGGCCCGTCACAGCAGCAGCGGGCCGAGTCTGCTaGGACCATGAGACGGACGGACCGTCTCCGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRPVTAAAGRVC*DHETDGPSPLP Trigger: AGGAAGCGGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACTCGGCCCGCTGCTGCTGTGACGGGCCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | CGTCACAGCAGCAGCGGGCCGAGTCTGCTGAGACCATaGGACGGACGGACCGTCTCCGCTTCCTCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: RHSSSGPSLLRP*DGRTVSASSTA Trigger: GGCAGTGGAGGAAGCGGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACTCGGCCCGCTGCTGCTGTGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 72 bp | TCCAGCTCCCGCTTCTCAGACGTCAAGCGGGTCACCTaGTCCCTCAGGTGCCAGATCTCCGTCTCCCGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSSRFSDVKRVT*SLRCQISVSRA Trigger: TGCTCGGGAGACGGAGATCTGGCACCTGAGGGAGCAGGTGACCCGCTTGACGTCTGAGAAGCGGGAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 72 bp | ACCATGAGACGGACGGACCGTCTCCGCTTCCTCCACTaGCCATTCGGTTCCGCTGCTGCTGCTGCTGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TMRRTDRLRFLH*PFGSAAAAAAS Trigger: TGAAGCAGCAGCAGCAGCAGCGGAACCGAATGGGCAGTGGAGGAAGCGGAGACGGTCCGTCCGTCTCATGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR CCA 72 bp | CCTCGGCCACGGCAGCGGCGACTTCTGGAAACTGAGTaGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: PRPRQRRLLETE*EKSSSSLQELT Trigger: AGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAAGTCGCCGCTGCCGTGGCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | CTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTaGCTGACGAGCAGCGGCTGCGGAAACTGTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: LSGRNPPARCRS*LTSSGCGNCPL Trigger: CAGTGGACAGTTTCCGCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | TTTCCCTCGGCCACGGCAGCGGCGACTTCTGGAAACTaGGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FPSATAAATSGN*VGEILQLAAGA Trigger: AGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAAGTCGCCGCTGCCGTGGCCGAGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 72 bp | CAGTGTCTTGAGCCTTGCACGCAGATTGCGCTCCGATaGCTTCACCTCCTCGAGCTCCTTAGCCAGTCGGCG | + |
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Preference number: 3 (lower is better) Translates to: QCLEPCTQIALR*LHLLELLSQSA Trigger: CGCCGACTGGCTAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | AGGTGCGTCTCATGGCCAGCTCGCTGTTCAGTGTCTTaGGCCTTGCACGCAGATTGCGCTCCGATGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RCVSWPARCSVS*ALHADCAPMPS Trigger: TGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGACGCACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR GCA 72 bp | TCTCATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTaGACGCAGATTGCGCTCCGATGCCTTCACCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: SHGQLAVQCLEP*TQIALRCLHLL Trigger: GAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | AGCACGGGAGGGGCGCTGCCTCCACACCAGACCCACTaGTGGTACAATGAGAAATCAGAATACCACCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: STGGALPPHQTH*WYNEKSEYHLS Trigger: GGAGAGGTGGTATTCTGATTTCTCATTGTACCATCAGTGGGTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | GGCGCTGCCTCCACACCAGACCCACTGATGGTACAATaGGAAATCAGAATACCACCTCTCCAGGATCATGAC | + |
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Preference number: 3 (lower is better) Translates to: GAASTPDPLMVQ*EIRIPPLQDHD Trigger: GTCATGATCCTGGAGAGGTGGTATTCTGATTTCTCATTGTACCATCAGTGGGTCTGGTGTGGAGGCAGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR CCA 72 bp | TTCAGGCGGGCATCTATTTCAGCCATGTCAGCTCCCTaGAAGTCGGAGCTGTACTCTTTAATAGGGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: FRRASISAMSAP*KSELYSLIGTQ Trigger: CTGGGTCCCTATTAAAGAGTACAGCTCCGACTTCCAGGGAGCTGACATGGCTGAAATAGATGCCCGCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| 3UTR TCA 72 bp | ACAATGAGAAATCAGAATACCACCTCTCCAGGATCATaGCCGCGTGTCCAGCCGGTTCATGTATTCCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: TMRNQNTTSPGS*PRVQPVHVFLQ Trigger: TTGCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTGGAGAGGTGGTATTCTGATTTCTCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133506.8 ENSMUST00000135467.8 |
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| CDS-3UTR GCA 90 bp | AACGACTCGGCCTCCTGGCGTGCTGCCCGCCCCGCCAGAGCCTCCTCTCGGGAGGGCGGCCTCCCAGCTTaGGGCTGCGCAGAGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: NDSASWRAARPARASSREGGLPA*GCAETP Trigger: TGGAGTCTCTGCGCAGCCGCAAGCTGGGAGGCCGCC...CTCCCGAGAGGAGGCTCTGGCGGGGCGGGCAGCACGCCAGGAGGCCGAGTCGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| CDS-3UTR CCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGGGGGGCCAAGGCACCTaGGCGGCCTCCCAGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: RLQEHLAMSTGGALPPHQGGQGT*AASQLA Trigger: CGCAAGCTGGGAGGCCGCCCAGGTGCCTTGGCCCCC...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
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| CDS-3UTR GCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGGGCGGCCTCCCAGCTTaGGGCTGCGCAGAGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLQEHLAMSTGGALPPHQGGLPA*GCAETP Trigger: TGGAGTCTCTGCGCAGCCGCAAGCTGGGAGGCCGCC...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCACCGGGAGCGGTTAACTaGGTCCCCTCGGCCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETPGAPGDEHGRGAASTPPGAVN*VPSARH Trigger: GTGACGGGCCGAGGGGACGCAGTTAACCGCTCCCGG...TGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACCCGGGAGCGGTTAACTaGGTCCCCTCGGCCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDPGAVN*VPSARH Trigger: GTGACGGGCCGAGGGGACGCAGTTAACCGCTCCCGG...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGGGTCAGGCTTGCCCTaGTACGGGAGGGGCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTETPGAPGDEHGRGAGSGLP*YGRGSG Trigger: CCCGCTGCCCCTCCCGTACCAGGGCAAGCCTGACCC...AGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | CTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCGCGACCACGGGACGTaGAGCGCTCCCGAGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQEHLAMSTGGALPPHRDHGT*SAPETM Trigger: CATCGTCTCGGGAGCGCTCCACGTCCCGTGGTCGCG...GTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGGCTGCAGGAGCTGACTaGCGAGCAGCGGCTGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLQEHLAMSTGGALPPHQAAGAD*RAAAAE Trigger: TTCCGCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGC...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCACCACAGGGTCAGGCTTaGCCTGGTACGGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETPGAPGDEHGRGAASTPPQGQA*PGTGGA Trigger: TGCCCCTCCCGTACCAGGGCAAGCCTGACCCTGTGG...TGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACGCGCACGACTACCTGTaGGTGAGGGCGAGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDAHDYL*VRARGV Trigger: CACACCCCTCGCCCTCACCCACAGGTAGTCGTGCGC...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | CCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGGGTAGCGTTTGGAGTTaGGCTGGGCCGACCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLRLQEHLAMSTGGALGSVWS*AGPTWG Trigger: CCCCCAGGTCGGCCCAGCTCAACTCCAAACGCTACC...CAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR GCA 90 bp | CACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCCTCCCAGCTTGCGGCTaGGCAGAGACTCCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTETPGAPGDEHGRGAASLPACG*AETPGL Trigger: CAGACCTGGAGTCTCTGCGCAGCCGCAAGCTGGGAG...GGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGTGGGAGAAATCCTCCAGCTCGCTGCAGGAGCTGACTGACGAGCAGCGGGGGGGCCAAGGCACCTaGGCGGCCTCCCAGCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEWEKSSSSLQELTDEQRGGQGT*AASQLA Trigger: CGCAAGCTGGGAGGCCGCCCAGGTGCCTTGGCCCCC...CCGCTGCTCGTCAGTCAGCTCCTGCAGCGAGCTGGAGGATTTCTCCCACTCAGT 67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACCGTTTGGAGTTGAGCTaGGCCGACCTGGGGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDRLELS*ADLGAK Trigger: CTTGGCCCCCAGGTCGGCCCAGCTCAACTCCAAACG...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCGTTTGGAGTTGAGCTaGGCCGACCTGGGGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQEHLAMSTGGALPPHRLELS*ADLGAK Trigger: CTTGGCCCCCAGGTCGGCCCAGCTCAACTCCAAACG...GTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR TCA 90 bp | GAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCACCTTCAGTGAGCGGATaGTGCCCTGCAGGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETPGAPGDEHGRGAASTPPSVSG*CPAGPQ Trigger: CTGTGGTCCTGCAGGGCATCATCCGCTCACTGAAGG...TGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | CACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCAGTCTGCTGAGACCATaGGACGGACGGACCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTETPGAPGDEHGRGAASSLLRP*DGRTVS Trigger: GGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACT...GGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
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| CDS-3UTR TCA 90 bp | GCCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCGGAAACTGTCCACTaGGGAGCTGCGGTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASHTETPGAPGDEHGRGAAETVH*GAAVPG Trigger: TCCCGGAACCGCAGCTCCTCAGTGGACAGTTTCCGC...AGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
||
| CDS-3UTR TCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGCAACTCCTCCTTCAGTaGGCGGATGATGCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLQEHLAMSTGGALPPHQQLLLQ*ADDALQ Trigger: CTGCAGGGCATCATCCGCTCACTGAAGGAGGAGTTG...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR GCA 90 bp | GTCAAGCGGGTCACCTGCTCCCTCAGGTGCCAGATCTCCGTCTCCCGAGCATCCCTCCCAGCTTGCGGCTaGGCAGAGACTCCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKRVTCSLRCQISVSRASLPACG*AETPGL Trigger: CAGACCTGGAGTCTCTGCGCAGCCGCAAGCTGGGAG...GGATGCTCGGGAGACGGAGATCTGGCACCTGAGGGAGCAGGTGACCCGCTTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACAACCGGCGGCAAGGTaGGTCTCCCCCTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TLRLQEHLAMSTGGALPPQPAAR*VSPFCT Trigger: TGTACAGAAGGGGGAGACGCACCTTGCCGCCGGTTG...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGAACTCTCCACGCCACTaGTCAGCTGTCATCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQEHLAMSTGGALPPHQNSPRH*SAVIRS Trigger: GGACCGGATGACAGCTGACCAGTGGCGTGGAGAGTT...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACCCAGCCCCCAGAACTGGCCAAGTGTCTCTGGTGATCACTGCGTTCTTGGCTCGCTGCAGGAGCTaGCTGACGAGCAGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDPAPRTGQVSLVITAFLARCRS*LTSSGC Trigger: GCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGCGAGC...CAAGAACGCAGTGATCACCAGAGACACTTGGCCAGTTCTGGGGGCTGGGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133506.8 |
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| CDS-3UTR GCA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACAGATTGCGCTCCGATaGCTTCACCTCCTCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLRLQEHLAMSTGGALPPQIALR*LHLLEL Trigger: GAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTG...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR GCA 90 bp | CACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCCGGTTCCGCTGCTGCTaGTGCTGCTTCATCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HTETPGAPGDEHGRGAASRFRCC*CCFILI Trigger: AATCAGGATGAAGCAGCAGCAGCAGCAGCGGAACCG...GGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR GCA 90 bp | CTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACATTCGGTTCCGCTGCTaGTGCTGCTGCTTCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQEHLAMSTGGALPPHIRFRC*CCCFIL Trigger: CAGGATGAAGCAGCAGCAGCAGCAGCGGAACCGAAT...GTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR GCA 90 bp | GCCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTCCCATTCGGTTCCGCTaGTGCTGCTGCTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ASHTETPGAPGDEHGRGAPIRFR*CCCCFI Trigger: GATGAAGCAGCAGCAGCAGCAGCGGAACCGAATGGG...AGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACCCAGCCCCCAGAACTaGCCAAGTGTCTCTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRLQEHLAMSTGGALPPPSPQN*PSVSGD Trigger: ATCACCAGAGACACTTGGCCAGTTCTGGGGGCTGGG...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR GCA 90 bp | CTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCGGTTCATGTATTCCTaGAAAGCCTTCAGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQEHLAMSTGGALPPHRFMYS*KAFRRA Trigger: TGCCCGCCTGAAGGCTTTGCAGGAATACATGAACCG...GTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | GCCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTTCCCCCTTCTGTACATaGCCAGCTCGCTGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTETPGAPGDEHGRGASPFCT*PARCSV Trigger: CACTGAACAGCGAGCTGGCCATGTACAGAAGGGGGA...AGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | GCCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTCTTTCACAAAGGCTGTaGGGTCAAAACGGGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASHTETPGAPGDEHGRGALSQRL*GQNGAH Trigger: GTGCGCCCCGTTTTGACCCCACAGCCTTTGTGAAAG...AGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACGGCAGCGGCGACTTCTaGAAACTGAGTGGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDGSGDF*KLSGRN Trigger: ATTTCTCCCACTCAGTTTCCAGAAGTCGCCGCTGCC...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | CCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGTTCAGCCCTCGAAGATaGCCCAACTCCTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHTLRLQEHLAMSTGGALFSPRR*PNSSFS Trigger: ACTGAAGGAGGAGTTGGGTCATCTTCGAGGGCTGAA...CAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | GAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCATTCCCTTCTGGAAACTaGGTGGGAGAAATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETPGAPGDEHGRGAASTPFPSGN*VGEILQ Trigger: CTGGAGGATTTCTCCCACTCAGTTTCCAGAAGGGAA...TGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133506.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACGCTGCTGCTGCTGCTaGTTCATCCTGATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLRLQEHLAMSTGGALPPRCCCC*FILISL Trigger: GAGAGAAATCAGGATGAAGCAGCAGCAGCAGCAGCG...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | CACCTCTCCAGGATCATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGGGTAGCGTTTGGAGTTaGGCTGGGCCGACCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSRIMTACPAGSCIPAKGSVWS*AGPTWG Trigger: CCCCCAGGTCGGCCCAGCTCAACTCCAAACGCTACC...CTTTGCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTGGAGAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACGCTGCTGCTTCATCCTaGTTTCTCTCTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDAAASS*FLSASS Trigger: AGAAGAAGCAGAGAGAAATCAGGATGAAGCAGCAGC...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | CAGGATCATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGCCTTCAGGGCTGCAGGAGCTGACTaGCGAGCAGCGGCTGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDHDRVSSRFMYSCKAFRAAGAD*RAAAAE Trigger: TTCCGCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGC...CCTGAAGGCTTTGCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133506.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCATTCCGCTGCTGCTGCTaGTGCTTCATCCTGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRLQEHLAMSTGGALPPFRCCC*CFILIS Trigger: AGAAATCAGGATGAAGCAGCAGCAGCAGCAGCGGAA...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR CCA 90 bp | CCTCACACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCTTCTGGAAACTGAGTaGGAGAAATCCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLRLQEHLAMSTGGALLLETE*EKSSSS Trigger: CGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAAG...CAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGTGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGACGAGTCAAGTCTTCAATaGAGTTGGCATCAAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGAPGDEHGRGAASTPDESSLQ*SWHQTL Trigger: GAGAGTTTGATGCCAACTTCATTGAAGACTTGACTC...GTCTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
||
| 3UTR CAA 72 bp | AAGGTGCGTCTCATGGCCAGCTCGCTGTTCAGTGTCTaGAGCCTTGCACGCAGATTGCGCTCCGATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVRLMASSLFSV*SLARRLRSDAF Trigger: GAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGAGACGCACCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATCATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGCCTTCAGGAACTCTCCACGCCACTaGTCAGCTGTCATCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDHDRVSSRFMYSCKAFRNSPRH*SAVIRS Trigger: GGACCGGATGACAGCTGACCAGTGGCGTGGAGAGTT...CCTGAAGGCTTTGCAGGAATACATGAACCGGCTGGACACGCGGTCATGATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| 3UTR CAA 72 bp | AGCTCGCTGTTCAGTGTCTTGAGCCTTGCACGCAGATaGCGCTCCGATGCCTTCACCTCCTCGAGCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLFSVLSLARR*RSDAFTSSSSL Trigger: TAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGAAAAAGACGCAACCAAGGACCACAGAGTATCTCTGGTACCTCCCTCCTGGCGGAAACTGTCCACTaGGGAGCTGCGGTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKRRNQGPQSISGTSLLAETVH*GAAVPG Trigger: TCCCGGAACCGCAGCTCCTCAGTGGACAGTTTCCGC...CAGGAGGGAGGTACCAGAGATACTCTGTGGTCCTTGGTTGCGTCTTTTTCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133506.8 |
||
| CDS-3UTR CCA 90 bp | CCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGCCTTCAGGCGGGCATCTATCTTCTGGAAACTGAGTaGGAGAAATCCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRVQPVHVFLQSLQAGIYLLETE*EKSSSS Trigger: CGAGCTGGAGGATTTCTCCCACTCAGTTTCCAGAAG...ATAGATGCCCGCCTGAAGGCTTTGCAGGAATACATGAACCGGCTGGACACGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133506.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGAACGACTCGGCCTCCTaGCGTGCTGCCCGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWNDSAS*RAARPA Trigger: GGCGGGGCGGGCAGCACGCCAGGAGGCCGAGTCGTT...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
||
| CDS-3UTR TCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGGCTCGCTGCAGGAGCTaGCTGACGAGCAGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWARCRS*LTSSGC Trigger: GCAGCCGCTGCTCGTCAGTCAGCTCCTGCAGCGAGC...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
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| CDS-3UTR GCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGGGAGCGGCCCAGCTGTaGCTCCAGCTCCCGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWGAAQL*LQLPLL Trigger: GAGAAGCGGGAGCTGGAGGCACAGCTGGGCCGCTCC...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR TCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGAGTCTGCTGAGACCATaGGACGGACGGACCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWSLLRP*DGRTVS Trigger: GGAGACGGTCCGTCCGTCTCATGGTCTCAGCAGACT...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000133506.8 |
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| CDS-3UTR GCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGCTCCGCTTCCTCCACTaGCCATTCGGTTCCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWLRFLH*PFGSAA Trigger: AGCAGCGGAACCGAATGGGCAGTGGAGGAAGCGGAG...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS-3UTR CCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGACAGACTCACTGCTCTaGGTGAGGGCCGACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWTDSLL*VRADSS Trigger: GCTGGAGTCGGCCCTCACCCAGAGCAGTGAGTCTGT...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
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| CDS-3UTR TCA 90 bp | TTATTTACAAAATACACACTCTCTTCTCCTAGAATGAATTACTGGGAGAGGTGGGAGTCAAGTCTTCAATaGAGTTGGCATCAAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LFTKYTLSSPRMNYWERWESSLQ*SWHQTL Trigger: GAGAGTTTGATGCCAACTTCATTGAAGACTTGACTC...CCACCTCTCCCAGTAATTCATTCTAGGAGAAGAGAGTGTGTATTTTGTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
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| CDS TCA 90 bp | CACGGGACGTGGAGCGCTCCCGAGACGATGAGGCTCGGCCCTCCCTaGCTGCAACCGGCGGCAAGGTGCGTCTCCCCCTTCTGTACATGG | + |
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Preference number: 5 (lower is better) Translates to: HGTWSAPETMRLGPP*LQPAARCVSPFCTW Trigger: CCATGTACAGAAGGGGGAGACGCACCTTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCACGTCCCGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS CCA 90 bp | GTAGCGTTTGGAGTTGAGCTGGGCCGACCTGGGGGCCAAGGCACCTaGGCGGCCTCCCAGCTTGCGGCTGCGCAGAGACTCCAGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VAFGVELGRPGGQGT*AASQLAAAQRLQVC Trigger: ACAGACCTGGAGTCTCTGCGCAGCCGCAAGCTGGGAGGCCGCCCAGGTGCCTTGGCCCCCAGGTCGGCCCAGCTCAACTCCAAACGCTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 ENSMUST00000150065.8 |
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| CDS-3UTR CAA 90 bp | AGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCACACCAGTCGCTGTTCAGTGTCTaGAGCCTTGCACGCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: RLQEHLAMSTGGALPPHQSLFSV*SLARRL Trigger: CAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGA...CTGGTGTGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS TCA 90 bp | ATCTCCGTCTCCCGAGCATCCTGGCCGCCATTCAGCCCTCGAAGATaGCCCAACTCCTCCTTCAGTGAGCGGATGATGCCCTGCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: ISVSRASWPPFSPRR*PNSSFSERMMPCRT Trigger: GGTCCTGCAGGGCATCATCCGCTCACTGAAGGAGGAGTTGGGTCATCTTCGAGGGCTGAATGGCGGCCAGGATGCTCGGGAGACGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000150065.8 |
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| CDS-3UTR CAA 90 bp | CATGACCGCGTGTCCAGCCGGTTCATGTATTCCTGCAAAGCCTTCAGGCGGGCAACCACAGGGTCAGGCTaGCCCTGTCAAACTCCACCG | + |
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Preference number: 5 (lower is better) Translates to: HDRVSSRFMYSCKAFRRATTGSG*PCQTPP Trigger: CGGTGGAGTTTGACAGGGCAAGCCTGACCCTGTGGT...TGCCCGCCTGAAGGCTTTGCAGGAATACATGAACCGGCTGGACACGCGGTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| CDS TCA 90 bp | TGCGTCTCCCCCTTCTGTACATGGCCAGCTCGCTGTTCAGTGTCTTaGGCCTTGCACGCAGATTGCGCTCCGATGCCTTCACCTCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: CVSPFCTWPARCSVS*ALHADCAPMPSPPR Trigger: TCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTACAGAAGGGGGAGACGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS GCA 90 bp | CCCCCTTCTGTACATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTaGACGCAGATTGCGCTCCGATGCCTTCACCTCCTCGAGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PPSVHGQLAVQCLEP*TQIALRCLHLLELL Trigger: AAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTACAGAAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS GCA 90 bp | CTCGCTGTTCAGTGTCTTGAGCCTTGCACGCAGATTGCGCTCCGATaGCTTCACCTCCTCGAGCTCCTTAGCCAGTCGGCGACTATCCNN | + |
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Preference number: 5 (lower is better) Translates to: LAVQCLEPCTQIALR*LHLLELLSQSATIX Trigger: NNGGATAGTCGCCGACTGGCTAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206499.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAGACTCCAGGAGCACCTGGCGATGAGCACGGGAGGGGCGCTGCCTCCAAAGTCTTCAATGAAGTaGGCATCAAACTCTCCACGC | + |
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Preference number: 5 (lower is better) Translates to: TLRLQEHLAMSTGGALPPKSSMK*ASNSPR Trigger: GCGTGGAGAGTTTGATGCCAACTTCATTGAAGACTT...TGGAGGCAGCGCCCCTCCCGTGCTCATCGCCAGGTGCTCCTGGAGTCTCAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 |
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| CDS-3UTR CAA 90 bp | GCCTCCAGCTCCCGCTTCTCAGACGTCAAGCGGGTCACCTGCTCCCTCAGGTGCAAGTCTTCAATGAAGTaGGCATCAAACTCTCCACGC | + |
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Preference number: 5 (lower is better) Translates to: ASSSRFSDVKRVTCSLRCKSSMK*ASNSPR Trigger: GCGTGGAGAGTTTGATGCCAACTTCATTGAAGACTT...GCACCTGAGGGAGCAGGTGACCCGCTTGACGTCTGAGAAGCGGGAGCTGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135467.8 |
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| CDS CCA 72 bp | GGAGTTGAGCTGGGCCGACCTGGGGGCCAAGGCACCTaGGCGGCCTCCCAGCTTGCGGCTGCGCAGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: GVELGRPGGQGT*AASQLAAAQRL Trigger: GAGTCTCTGCGCAGCCGCAAGCTGGGAGGCCGCCCAGGTGCCTTGGCCCCCAGGTCGGCCCAGCTCAACTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 ENSMUST00000150065.8 |
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| CDS TCA 72 bp | TGGAGCGCTCCCGAGACGATGAGGCTCGGCCCTCCCTaGCTGCAACCGGCGGCAAGGTGCGTCTCCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: WSAPETMRLGPP*LQPAARCVSPF Trigger: GAAGGGGGAGACGCACCTTGCCGCCGGTTGCAGTCAGGGAGGGCCGAGCCTCATCGTCTCGGGAGCGCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS TCA 72 bp | TCCCGAGCATCCTGGCCGCCATTCAGCCCTCGAAGATaGCCCAACTCCTCCTTCAGTGAGCGGATGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRASWPPFSPRR*PNSSFSERMMP Trigger: GGGCATCATCCGCTCACTGAAGGAGGAGTTGGGTCATCTTCGAGGGCTGAATGGCGGCCAGGATGCTCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098780.10 ENSMUST00000150065.8 |
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| CDS CAA 90 bp | GTGCGTCTCCCCCTTCTGTACATGGCCAGCTCGCTGTTCAGTGTCTaGAGCCTTGCACGCAGATTGCGCTCCGATGCCTTCACCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VRLPLLYMASSLFSV*SLARRLRSDAFTSS Trigger: CGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTACAGAAGGGGGAGACGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS CAA 90 bp | TACATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTGCACGCAGATaGCGCTCCGATGCCTTCACCTCCTCGAGCTCCTTAGCCAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: YMASSLFSVLSLARR*RSDAFTSSSSLASR Trigger: CCGACTGGCTAAGGAGCTCGAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS GCA 72 bp | GTACATGGCCAGCTCGCTGTTCAGTGTCTTGAGCCTTaGACGCAGATTGCGCTCCGATGCCTTCACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VHGQLAVQCLEP*TQIALRCLHLL Trigger: GAGGAGGTGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS CAA 72 bp | CCCCTTCTGTACATGGCCAGCTCGCTGTTCAGTGTCTaGAGCCTTGCACGCAGATTGCGCTCCGATGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLLYMASSLFSV*SLARRLRSDAF Trigger: GAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTACAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS TCA 72 bp | CCCTTCTGTACATGGCCAGCTCGCTGTTCAGTGTCTTaGGCCTTGCACGCAGATTGCGCTCCGATGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PFCTWPARCSVS*ALHADCAPMPS Trigger: TGAAGGCATCGGAGCGCAATCTGCGTGCAAGGCTCAAGACACTGAACAGCGAGCTGGCCATGTACAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098780.10 |
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| CDS CCA 72 bp | TCTTCAATGAAGTTGGCATCAAACTCTCCACGCCACTaGTCAGCTGTCATCCGGTCCTCCACCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSMKLASNSPRH*SAVIRSSTSSS Trigger: GGAGCTGGAGGTGGAGGACCGGATGACAGCTGACCAGTGGCGTGGAGAGTTTGATGCCAACTTCATTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 ENSMUST00000139077.2 ENSMUST00000150065.8 |
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| CDS TCA 72 bp | CAGAAAATGCTGAACTGTTTAAAGTTCCCCGTCTTATaGGTCAAGTCTTCAATGAAGTTGGCATCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: QKMLNCLKFPVL*VKSSMKLASNS Trigger: AGAGTTTGATGCCAACTTCATTGAAGACTTGACTCATAAGACGGGGAACTTTAAACAGTTCAGCATTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098780.10 ENSMUST00000135467.8 ENSMUST00000139077.2 ENSMUST00000150065.8 |
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