Pregenerated sensors for CCDC60 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043913

Ensembl transcript IDs: ENSMUST00000050178.13, ENSMUST00000086483.4

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GTCAGGACAGGAACTCACGCAGGGCAGGGACCTGGAGGCAGGAGCTaGTGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCTC	+
Preference number: 1 (lower is better) Translates to: VRTGTHAGQGPGGRS*CRGHGGVLLTGLLL Trigger: GAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 90 bp	GAACCCAGGACCACCAGCCTAGGGATGGCCCCACCCACGATGGGCTaGGCCCTTCCACATCAATCACTAATGAGAAAATGCCTTACAGCA	+
Preference number: 1 (lower is better) Translates to: EPRTTSLGMAPPTMG*ALPHQSLMRKCLTA Trigger: TGCTGTAAGGCATTTTCTCATTAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCTGGTGGTCCTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 90 bp	ATCCATTCCACACTGTGTAGAAGGGAGCAACCTATCAGTCAGTGGTaGGTCTGTGAGTCTGTCTGTCTGTCCTCAGGGCTCCGTTCTCTC	+
Preference number: 1 (lower is better) Translates to: IHSTLCRREQPISQW*VCESVCLSSGLRSL Trigger: GAGAGAACGGAGCCCTGAGGACAGACAGACAGACTCACAGACGCACCACTGACTGATAGGTTGCTCCCTTCTACACAGTGTGGAATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR TCA 90 bp	GGGACCACAGGGTTTATTCAGCTCACACTTCCACATCACTGTTCATaGTCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCT	+
Preference number: 1 (lower is better) Translates to: GTTGFIQLTLPHHCS*SKEVRTGTHAGQGP Trigger: AGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCATGAACAGTGATGTGGAAGTGTGAGCTGAATAAACCCTGTGGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 90 bp	ACAGTCATATTGTTAGAAGTGTCTTCAGCTGATCTCACTGCTCCATaGCGTGTGTCCAGGAGAGAAGAGAGGAGGCTACGGGCACAGGCT	+
Preference number: 1 (lower is better) Translates to: TVILLEVSSADLTAP*RVSRREERRLRAQA Trigger: AGCCTGTGCCCGTAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGAAGACACTTCTAACAATATGACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR GCA 90 bp	CAGGCCATGAGCAAAAGCTTCCCTCTTTTGTGTCCTTGTATAGGCTaGCAGCGGAAGGCAAGGCAGAGAGGTATGTTATCCCAGATCGAA	+
Preference number: 1 (lower is better) Translates to: QAMSKSFPLLCPCIG*QRKARQRGMLSQIE Trigger: TTCGATCTGGGATAACATACCTCTCTGCCTTGCCTTCCGCTGGCAGCCTATACAAGGACACAAAAGAGGGAAGCTTTTGCTCATGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 90 bp	ATAATCCATTCCACACTGTGTAGAAGGGAGCAACCTATCAGTCAGTaGTGCGTCTGTGAGTCTGTCTGTCTGTCCTCAGGGCTCCGTTCT	+
Preference number: 1 (lower is better) Translates to: IIHSTLCRREQPISQ*CVCESVCLSSGLRS Trigger: AGAACGGAGCCCTGAGGACAGACAGACAGACTCACAGACGCACCACTGACTGATAGGTTGCTCCCTTCTACACAGTGTGGAATGGATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CCA 90 bp	CATAGCTCTGGCTGGCCTGGAATTAAAGGTGTCCACTACCATCCCTaGCAGGGTAGAGTAGTTTTTATCCTAGCAGCACACGAAAAAGAC	+
Preference number: 1 (lower is better) Translates to: HSSGWPGIKGVHYHP*QGRVVFILAAHEKD Trigger: GTCTTTTTCGTGTGCTGCTAGGATAAAAACTACTCTACCCTGCCAGGGATGGTAGTGGACACCTTTAATTCCAGGCCAGCCAGAGCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR GCA 90 bp	CTCTGCCTTCCACATGTGCCCATGCACAGCATGAATGTACACGTGTaGACACATACATGCCATTTCTTTATGTGCATCGCAGTTAACCAT	+
Preference number: 1 (lower is better) Translates to: LCLPHVPMHSMNVHV*THTCHFFMCIAVNH Trigger: ATGGTTAACTGCGATGCACATAAAGAAATGGCATGTATGTGTGCACACGTGTACATTCATGCTGTGCATGGGCACATGTGGAAGGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR TCA 90 bp	CATTTCCAAGATTCTAGTTCAAGAATCAAGTACTTGTTCAGTCCGTaGGGCTGGATGTCTCAGCTGGTCTTCAGTGTACACCACAACTCT	+
Preference number: 1 (lower is better) Translates to: HFQDSSSRIKYLFSP*GWMSQLVFSVHHNS Trigger: AGAGTTGTGGTGTACACTGAAGACCAGCTGAGACATCCAGCCTCACGGACTGAACAAGTACTTGATTCTTGAACTAGAATCTTGGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCGGGCCGTGGAGGCTGTaGGGACCGTGGGGGCTGTGG	+
Preference number: 2 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLGPWRL*GPWGLW Trigger: CCACAGCCCCCACGGTCCCCACAGCCTCCACGGCCC...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR GCA 90 bp	CATGATCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCTGGAGGCAGAGGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCC	+
Preference number: 2 (lower is better) Translates to: HDQRKSGQELTQGRDLEAEAMEG*CLLACS Trigger: GGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTC...TGCCTCCAGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CCA 90 bp	ATGATCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCTGGAGGCAGCTGATGCAGAGGCCATaGAGGGGTGCTGCTTACTGG	+
Preference number: 2 (lower is better) Translates to: MIKGSQDRNSRRAGTWRQLMQRP*RGAAYW Trigger: CCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAG...CTGCCTCCAGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CCA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGTTAGGGATGTGGTGCTaGCTTGCTTTCCTCCACGGG	+
Preference number: 2 (lower is better) Translates to: EGRATWDHPLQTVILLEVLGMWC*LAFLHG Trigger: CCCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAA...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR GCA 90 bp	GACCACCAGCCTAGGGATGGCCCCACCCACGATGGGCTGGGCCCTTCCACATCATCACTAATGAGAAAATaGCTTACAGCAGAATCTCAT	+
Preference number: 2 (lower is better) Translates to: DHQPRDGPTHDGLGPSTSSLMRK*LTAESH Trigger: ATGAGATTCTGCTGTAAGGCATTTTCTCATTAGTGA...TGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCTGGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CAA 90 bp	GGCCTCGTCCTGGTTCTGTCTAGGGAGCCAGACATGTTTAGATCCTaGGTGGATTCTGCCCTGATGTATCCTGGTAAAATGCTGGCTCCT	+
Preference number: 2 (lower is better) Translates to: GLVLVLSREPDMFRS*VDSALMYPGKMLAP Trigger: AGGAGCCAGCATTTTACCAGGATACATCAGGGCAGAATCCACCAAGGATCTAAACATGTCTGGCTCCCTAGACAGAACCAGGACGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CCA 90 bp	CACGTGTGCACACATACATGCCATTTCTTTATGTGCATCGCAGTTAACCATTCAGAGGGGAGGGCCACCTaGGACCACCCTCTCCAGACA	+
Preference number: 2 (lower is better) Translates to: HVCTHTCHFFMCIAVNHSEGRAT*DHPLQT Trigger: TGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC...TGAATGGTTAACTGCGATGCACATAAAGAAATGGCATGTATGTGTGCACACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR TCA 90 bp	GATGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCTCATGGCTTGCTTGGCTCCTCTTAGTGTaGCCTTACATCTTTTTATCA	+
Preference number: 2 (lower is better) Translates to: DAEAMEGCCLLACSSWLAWLLLV*PYIFLS Trigger: TGATAAAAAGATGTAAGGTCACACTAAGAGGAGCCA...AGCAAGCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR TCA 90 bp	CCTTGTATAGGCTGCCAGCGGAAGGCAAGGCAGAGAGGTATGTTATCCCAGATCCCACATTCACGATCTTaGAATTGGCTATGGTGGGGT	+
Preference number: 2 (lower is better) Translates to: PCIGCQRKARQRGMLSQIPHSRS*NWLWWG Trigger: ACCCCACCATAGCCAATTTCAAGATCGTGAATGTGG...GATCTGGGATAACATACCTCTCTGCCTTGCCTTCCGCTGGCAGCCTATACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCTGGGGGCTGTGGAGCTaGAACCAGATAATCCATTCC	+
Preference number: 2 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLWGLWS*NQIIHS Trigger: GGAATGGATTATCTGGTTCCAGCTCCACAGCCCCCA...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR TCA 90 bp	CTTACAGCAGAATCTCATAGCGGCATTTCCAAGATTCTAGTTCAAGAATCAAGTGAATGGTCTTGCCAGTaGGAGCGAGGGCAAGCAGGC	+
Preference number: 2 (lower is better) Translates to: LTAESHSGISKILVQESSEWSCQ*ERGQAG Trigger: GCCTGCTTGCCCTCGCTCTCACTGGCAAGACCATTC...ACTTGATTCTTGAACTAGAATCTTGGAAATGCCGCTATGAGATTCTGCTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR TCA 90 bp	CTTACAGCAGAATCTCATAGCGGCATTTCCAAGATTCTAGTTCAAGAATCAAGTAGGGCAAGCAGGCCATaGGCAAAAGCTTCCCTCTTT	+
Preference number: 2 (lower is better) Translates to: LTAESHSGISKILVQESSRASRP*AKASLF Trigger: AAAGAGGGAAGCTTTTGCTCATGGCCTGCTTGCCCT...ACTTGATTCTTGAACTAGAATCTTGGAAATGCCGCTATGAGATTCTGCTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR GCA 90 bp	ACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCGGCTTAGGGATGTGGTaGTGGCTTGCTTTCCTCCAC	+
Preference number: 2 (lower is better) Translates to: TLNSSLGRCQTSRLDLLSGLGMW*WLAFLH Trigger: GTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCC...GGATAATAAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR GCA 90 bp	TTCAGCTCACACTTCCACATCACTGTTCATGATCAAAGGAAGTCAGGACAGGAAAAGATCCCTTGGAGATaGAACCCTCCAGTTTTGAGT	+
Preference number: 2 (lower is better) Translates to: FSSHFHITVHDQRKSGQEKIPWR*NPPVLS Trigger: ACTCAAAACTGGAGGGTTGCATCTCCAAGGGATCTT...TTCCTGTCCTGACTTCCTTTGATCATGAACAGTGATGTGGAAGTGTGAGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR TCA 90 bp	ACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCAGAAGTGTCTTCAGCTaGTCTCACTGCTCCATGCCG	+
Preference number: 2 (lower is better) Translates to: TLNSSLGRCQTSRLDLLSRSVFS*SHCSMP Trigger: CGGCATGGAGCAGTGAGATCAGCTGAAGACACTTCT...GGATAATAAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR GCA 90 bp	TGCATCGCAGTTAACCATTCATCTGTCCCTGAATCTATACTCTACCTGTTCATTATTGCCGCACCCAAATaGCACACCTTGAATTCTTCC	+
Preference number: 2 (lower is better) Translates to: CIAVNHSSVPESILYLFIIAAPK*HTLNSS Trigger: GGAAGAATTCAAGGTGTGGCATTTGGGTGCGGCAAT...AATGAACAGGTAGAGTATAGATTCAGGGACAGATGAATGGTTAACTGCGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR GCA 90 bp	AAATTTAAAAAGAGTGGAAGAATCCTTTCGAGCCTCTGTCTCCTTGTTTGCAGAATCCACCCACCCATCTaGCTATACTACTACCTATTT	+
Preference number: 2 (lower is better) Translates to: KFKKSGRILSSLCLLVCRIHPPI*LYYYLF Trigger: AAATAGGTAGTAGTATAGGCAGATGGGTGGGTGGAT...TCTGCAAACAAGGAGACAGAGGCTCGAAAGGATTCTTCCACTCTTTTTAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR GCA 72 bp	GGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTGGTaGTGGCTTGCTTTCCTCCACGGGGACTGGGCCCCT	+
Preference number: 3 (lower is better) Translates to: GGYGHRLGLGMW*WLAFLHGDWAP Trigger: AGGGGCCCAGTCCCCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CCA 72 bp	AGAGGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTaGTGCTGGCTTGCTTTCCTCCACGGGGACTGGGCC	+
Preference number: 3 (lower is better) Translates to: RGGYGHRLGLGM*CWLAFLHGDWA Trigger: GGCCCAGTCCCCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CCA 72 bp	GCAGGGACCTGGAGGCAGGAGCTGATGCAGAGGCCATaGAGGGGTGCTGCTTACTGGCTTGCTCCTCATGGC	+
Preference number: 3 (lower is better) Translates to: AGTWRQELMQRP*RGAAYWLAPHG Trigger: GCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 72 bp	GAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTaGTTACTGGCTTGCTCCTCATGGCTTGCTCAGCCT	+
Preference number: 3 (lower is better) Translates to: EAGADAEAMEGC*LLACSSWLAQP Trigger: AGGCTGAGCAAGCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 72 bp	CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCCTCATGGCTTGCTCAG	+
Preference number: 3 (lower is better) Translates to: LEAGADAEAMEG*CLLACSSWLAQ Trigger: CTGAGCAAGCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	GAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTaGCTTGCTCCTCATGGCTTGCTCAGCCTGCTTTCT	+
Preference number: 3 (lower is better) Translates to: ELMQRPWRGAAY*LAPHGLLSLLS Trigger: AGAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	ACCACCAGCCTAGGGATGGCCCCACCCACGATGGGCTaGGCCCTTCCACATCAATCACTAATGAGAAAATGC	+
Preference number: 3 (lower is better) Translates to: TTSLGMAPPTMG*ALPHQSLMRKC Trigger: GCATTTTCTCATTAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CAA 90 bp	CATGATCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCTGGAGGCAATCAATGCTAACAACTaGGGGCCCTGTCCTGAGCAC	+
Preference number: 3 (lower is better) Translates to: HDQRKSGQELTQGRDLEAINANN*GPCPEH Trigger: GTGCTCAGGACAGGGCCCCAAGTTGTTAGCATTGAT...TGCCTCCAGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 72 bp	ACACTGTGTAGAAGGGAGCAACCTATCAGTCAGTGGTaGGTCTGTGAGTCTGTCTGTCTGTCCTCAGGGCTC	+
Preference number: 3 (lower is better) Translates to: TLCRREQPISQW*VCESVCLSSGL Trigger: GAGCCCTGAGGACAGACAGACAGACTCACAGACGCACCACTGACTGATAGGTTGCTCCCTTCTACACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR GCA 72 bp	AGTGGAAGAATCCTTTCGAGCCTCTGTCTCCTTGTTTaGAGAACAGCAAAAAGCCAGTGCGTGGGGGCCGTG	+
Preference number: 3 (lower is better) Translates to: SGRILSSLCLLV*RTAKSQCVGAV Trigger: CACGGCCCCCACGCACTGGCTTTTTGCTGTTCTGCAAACAAGGAGACAGAGGCTCGAAAGGATTCTTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CCA 72 bp	TCCACACTGTGTAGAAGGGAGCAACCTATCAGTCAGTaGTGCGTCTGTGAGTCTGTCTGTCTGTCCTCAGGG	+
Preference number: 3 (lower is better) Translates to: STLCRREQPISQ*CVCESVCLSSG Trigger: CCCTGAGGACAGACAGACAGACTCACAGACGCACCACTGACTGATAGGTTGCTCCCTTCTACACAGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR CAA 90 bp	TCACTGTTCATGATCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCCTTGCTCCTCATGGCTaGCTCAGCCTGCTTTCTTGT	+
Preference number: 3 (lower is better) Translates to: SLFMIKGSQDRNSRRAGTLAPHG*LSLLSC Trigger: ACAAGAAAGCAGGCTGAGCAAGCCATGAGGAGCAAG...GGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCATGAACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR GCA 72 bp	TTGTTAGAAGTGTCTTCAGCTGATCTCACTGCTCCATaGCGTGTGTCCAGGAGAGAAGAGAGGAGGCTACGG	+
Preference number: 3 (lower is better) Translates to: LLEVSSADLTAP*RVSRREERRLR Trigger: CCGTAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGAAGACACTTCTAACAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR CAA 90 bp	AGCCTAGGGATGGCCCCACCCACGATGGGCTGGGCCCTTCCACATCAATCACTACCAGAAGTAGTCAAATaGACAACTAAGAATAGCCAT	+
Preference number: 3 (lower is better) Translates to: SLGMAPPTMGWALPHQSLPEVVK*TTKNSH Trigger: ATGGCTATTCTTAGTTGTCAATTTGACTACTTCTGG...TAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR-3UTR CAA 90 bp	GGCCCCACCCACGATGGGCTGGGCCCTTCCACATCAATCACTAATGAGAAAATGAAAAGCTTCCCTCTTTaGTGTCCTTGTATAGGCTGC	+
Preference number: 3 (lower is better) Translates to: GPTHDGLGPSTSITNEKMKSFPL*CPCIGC Trigger: GCAGCCTATACAAGGACACAAAAGAGGGAAGCTTTT...CATTTTCTCATTAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	GGCTGGCCTGGAATTAAAGGTGTCCACTACCATCCCTaGCAGGGTAGAGTAGTTTTTATCCTAGCAGCACAC	+
Preference number: 3 (lower is better) Translates to: GWPGIKGVHYHP*QGRVVFILAAH Trigger: GTGTGCTGCTAGGATAAAAACTACTCTACCCTGCCAGGGATGGTAGTGGACACCTTTAATTCCAGGCCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR CAA 90 bp	TGCATCGCAGTTAACCATTCATCTGTCCCTGAATCTATACTCTACCTGTTCATTGGATGTGGTGCTGGCTaGCTTTCCTCCACGGGGACT	+
Preference number: 3 (lower is better) Translates to: CIAVNHSSVPESILYLFIGCGAG*LSSTGT Trigger: AGTCCCCGTGGAGGAAAGCAAGCCAGCACCACATCC...AATGAACAGGTAGAGTATAGATTCAGGGACAGATGAATGGTTAACTGCGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR CAA 90 bp	AGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCATGCACAGCATGAATCCCAAATGCCACACCTaGAATTCTTCCTTGGGAAGA	+
Preference number: 3 (lower is better) Translates to: RYPDVNLCLPHVPMHSMNPKCHT*NSSLGR Trigger: TCTTCCCAAGGAAGAATTCAAGGTGTGGCATTTGGG...ATTCATGCTGTGCATGGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR TCA 72 bp	TCTCCAGACAGTCATATTGTTAGAAGTGTCTTCAGCTaGTCTCACTGCTCCATGCCGTGTGTCCAGGAGAGA	+
Preference number: 3 (lower is better) Translates to: SPDSHIVRSVFS*SHCSMPCVQER Trigger: TCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGAAGACACTTCTAACAATATGACTGTCTGGAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR-3UTR CAA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCACCTTGAATTCTTCCTaGGGAAGATGTCAAACATCC	+
Preference number: 3 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLTLNSS*GRCQTS Trigger: GGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGT...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR GCA 72 bp	GGCTGGGCCCTTCCACATCAATCACTAATGAGAAAATaGCTTACAGCAGAATCTCATAGCGGCATTTCCAAG	+
Preference number: 3 (lower is better) Translates to: GWALPHQSLMRK*LTAESHSGISK Trigger: CTTGGAAATGCCGCTATGAGATTCTGCTGTAAGGCATTTTCTCATTAGTGATTGATGTGGAAGGGCCCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR TCA 72 bp	GATTCTAGTTCAAGAATCAAGTACTTGTTCAGTCCGTaGGGCTGGATGTCTCAGCTGGTCTTCAGTGTACAC	+
Preference number: 3 (lower is better) Translates to: DSSSRIKYLFSP*GWMSQLVFSVH Trigger: GTGTACACTGAAGACCAGCTGAGACATCCAGCCTCACGGACTGAACAAGTACTTGATTCTTGAACTAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	TACTATAACCCAATGCCAAGCTTAAAGCTCCCCACATaGAAAAAGGTTCCATCAGAATTAACAAAGCCGGGC	+
Preference number: 3 (lower is better) Translates to: YYNPMPSLKLPT*KKVPSELTKPG Trigger: GCCCGGCTTTGTTAATTCTGATGGAACCTTTTTCCATGTGGGGAGCTTTAAGCTTGGCATTGGGTTATAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	GATTGGCACTGTTACAAATCATGGGTCTCTGAGCTCTaGGGACAGGTAACTAACTTAACCCTTTACTATAAC	+
Preference number: 3 (lower is better) Translates to: DWHCYKSWVSEL*GQVTNLTLYYN Trigger: GTTATAGTAAAGGGTTAAGTTAGTTACCTGTCCCCAGAGCTCAGAGACCCATGATTTGTAACAGTGCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CCA 72 bp	TATGGTGGGGTTTTCACATATACTTCCTATAGAGATTaGCACTGTTACAAATCATGGGTCTCTGAGCTCTGG	+
Preference number: 3 (lower is better) Translates to: YGGVFTYTSYRD*HCYKSWVSELW Trigger: CCAGAGCTCAGAGACCCATGATTTGTAACAGTGCCAATCTCTATAGGAAGTATATGTGAAAACCCCACCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR TCA 72 bp	TTCACGTTCAACCATTCTACACCACATTCACGATCTTaGAATTGGCTATGGTGGGGTTTTCACATATACTTC	+
Preference number: 3 (lower is better) Translates to: FTFNHSTPHSRS*NWLWWGFHIYF Trigger: GAAGTATATGTGAAAACCCCACCATAGCCAATTTCAAGATCGTGAATGTGGTGTAGAATGGTTGAACGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	GACCACCAGCCTAGGGATGGCCCCACCCACGATGGGCTGGGCCCTTCCACATCAGCCTCTAGGAGCCAGTaGAGAGCACACAGCTGGCGG	+
Preference number: 4 (lower is better) Translates to: DHQPRDGPTHDGLGPSTSASRSQ*RAHSWR Trigger: CCGCCAGCTGTGTGCTCTCCACTGGCTCCTAGAGGC...TGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCTGGTGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	GACCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTGGTGGGTGTGGTCGATaGTCAGGGCCTCTAGGAGCC	+
Preference number: 4 (lower is better) Translates to: DLEAGADAEAMEGCCLLAGGCGR*SGPLGA Trigger: GGCTCCTAGAGGCCCTGACCATCGACCACACCCACC...AGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	CTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCCTCCACGGTGGAGAGCACACAGCTaGCGGAAGAGCGGATCCACG	+
Preference number: 4 (lower is better) Translates to: LRAQAGLRDVVLACFPPRWRAHS*RKSGST Trigger: CGTGGATCCGCTCTTCCGCCAGCTGTGTGCTCTCCA...CCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	AGAGGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCGGTGGGTGTGGTCGATaGTCAGGGCCTCTAGGAGCC	+
Preference number: 4 (lower is better) Translates to: RGGYGHRLGLGMWCWLAFGGCGR*SGPLGA Trigger: GGCTCCTAGAGGCCCTGACCATCGACCACACCCACC...GAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	GACCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTCCTGCAGTGGATATCTaGGAACTTCTTGGCCGGCTG	+
Preference number: 4 (lower is better) Translates to: DLEAGADAEAMEGCCLLAPAVDI*ELLGRL Trigger: CAGCCGGCCAAGAAGTTCTCAGATATCCACTGCAGG...AGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR TCA 90 bp	AGAGGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCCCTCCTGGGCTACGCTaGAAAACTTGGCCCGCATGT	+
Preference number: 4 (lower is better) Translates to: RGGYGHRLGLGMWCWLAFPPGLR*KTWPAC Trigger: ACATGCGGGCCAAGTTTTTCAGCGTAGCCCAGGAGG...GAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGGGAGCCGGGGTTCACTaGCATCATACTGCTCTGGGG	+
Preference number: 4 (lower is better) Translates to: EGRATWDHPLQTVILLEVGAGVH*HHTALG Trigger: CCCCAGAGCAGTATGATGTCAGTGAACCCCGGCTCC...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	CTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCCTCCACGGGTCGGCAATCTCCTCTaGGTCCCCTTTCACTATGGA	+
Preference number: 4 (lower is better) Translates to: LRAQAGLRDVVLACFPPRVGNLL*VPFHYG Trigger: TCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGAC...CCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TCAGCTGATCTCACTGCTCCATGCCGTGTGTCCAGGAGAGAAGAGAGGAGGCTAGCCATGAGACAGCTGTaGATGGGCGTGAACGGGCGG	+
Preference number: 4 (lower is better) Translates to: SADLTAPCRVSRREERRLAMRQL*MGVNGR Trigger: CCGCCCGTTCACGCCCATCCACAGCTGTCTCATGGC...TAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TCAGCTGATCTCACTGCTCCATGCCGTGTGTCCAGGAGAGAAGAGAGGAGGCTAGCCTCTAGGAGCCAGTaGAGAGCACACAGCTGGCGG	+
Preference number: 4 (lower is better) Translates to: SADLTAPCRVSRREERRLASRSQ*RAHSWR Trigger: CCGCCAGCTGTGTGCTCTCCACTGGCTCCTAGAGGC...TAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCTCATGGCTTGCTCAATGGTGTGGTGGGTGTaGTCGATGGTCAGGGCCTCT	+
Preference number: 4 (lower is better) Translates to: CRGHGGVLLTGLLLMACSMVWWV*SMVRAS Trigger: AGAGGCCCTGACCATCGACCACACCCACCACACCAT...TGAGCAAGCCATGAGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR TCA 90 bp	AGCCTAGGGATGGCCCCACCCACGATGGGCTGGGCCCTTCCACATCAATCACTAAATCTGGGTCCTGCATaGTCAGCTTCCTTTTGGGGT	+
Preference number: 4 (lower is better) Translates to: SLGMAPPTMGWALPHQSLNLGPA*SASFWG Trigger: ACCCCAAAAGGAAGCTGATCATGCAGGACCCAGATT...TAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	CCACCCACGATGGGCTGGGCCCTTCCACATCAATCACTAATGAGAAAATGCCTTGCCATGAGACAGCTGTaGATGGGCGTGAACGGGCGG	+
Preference number: 4 (lower is better) Translates to: PPTMGWALPHQSLMRKCLAMRQL*MGVNGR Trigger: CCGCCCGTTCACGCCCATCCACAGCTGTCTCATGGC...AAGGCATTTTCTCATTAGTGATTGATGTGGAAGGGCCCAGCCCATCGTGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGGACATCATACTGCTCTaGGGAGAAGAGCCCCCACTG	+
Preference number: 4 (lower is better) Translates to: EGRATWDHPLQTVILLEVDIILL*GEEPPL Trigger: CAGTGGGGGCTCTTCTCCCCAGAGCAGTATGATGTC...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	AGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCATGCACAGCATGAATGGCTGGCCATGGCTGTaGGGATGGCGGGAGCTTTGT	+
Preference number: 4 (lower is better) Translates to: RYPDVNLCLPHVPMHSMNGWPWL*GWRELC Trigger: ACAAAGCTCCCGCCATCCGCACAGCCATGGCCAGCC...ATTCATGCTGTGCATGGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGTGTCTTCGATGTCTTTaGTGCCCATGGGCTCATCGG	+
Preference number: 4 (lower is better) Translates to: EGRATWDHPLQTVILLEVCLRCL*CPWAHR Trigger: CCGATGAGCCCATGGGCAGCAAAGACATCGAAGACA...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCACCTTCAGGAGGACGTaGGGCCGGATCCTCAGGTCC	+
Preference number: 4 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLTFRRT*GRILRS Trigger: GGACCTGAGGATCCGGCCCCACGTCCTCCTGAAGGT...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	GACCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTGTTTTCATCCCAATCTaGGTCCTGCATGATCAGCTT	+
Preference number: 4 (lower is better) Translates to: DLEAGADAEAMEGCCLLAVFIPI*VLHDQL Trigger: AAGCTGATCATGCAGGACCCAGATTGGGATGAAAAC...AGCCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CAA 72 bp	GAGGGCAAGCAGGCCATGAGCAAAAGCTTCCCTCTTTaGTGTCCTTGTATAGGCTGCCAGCGGAAGGCAAGG	+
Preference number: 4 (lower is better) Translates to: EGKQAMSKSFPL*CPCIGCQRKAR Trigger: CCTTGCCTTCCGCTGGCAGCCTATACAAGGACACAAAAGAGGGAAGCTTTTGCTCATGGCCTGCTTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR TCA 90 bp	TCTGGCTGGCCTGGAATTAAAGGTGTCCACTACCATCCCTGGCAGGGTAGAGTAGGCTCTGTAGCCAGTTaGTGTAGTCTTCCTGGGGCA	+
Preference number: 4 (lower is better) Translates to: SGWPGIKGVHYHPWQGRVGSVAS*CSLPGA Trigger: TGCCCCAGGAAGACTACATCAACTGGCTACAGAGCC...TACTCTACCCTGCCAGGGATGGTAGTGGACACCTTTAATTCCAGGCCAGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TCAGCTGATCTCACTGCTCCATGCCGTGTGTCCAGGAGAGAAGAGAGGAGGCTACCTATCTTCACACACTaGATCAGGAAGCGGCTTCGC	+
Preference number: 4 (lower is better) Translates to: SADLTAPCRVSRREERRLPIFTH*IRKRLR Trigger: GCGAAGCCGCTTCCTGATCCAGTGTGTGAAGATAGG...TAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TCTGGCTGGCCTGGAATTAAAGGTGTCCACTACCATCCCTGGCAGGGTAGAGTACAATCAAGGGCCTCATaGTGTGGTGGGTGTGGTCGA	+
Preference number: 4 (lower is better) Translates to: SGWPGIKGVHYHPWQGRVQSRAS*CGGCGR Trigger: TCGACCACACCCACCACACCATGAGGCCCTTGATTG...TACTCTACCCTGCCAGGGATGGTAGTGGACACCTTTAATTCCAGGCCAGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGCTCTTCGACTTCTTCTaGATCACCTGGATGTGGCTC	+
Preference number: 4 (lower is better) Translates to: EGRATWDHPLQTVILLEVLFDFF*ITWMWL Trigger: GAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAG...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	TCTCATTTTATCAGAAGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCAAGAGCGGATCCACGTaGGACTCAGGCAGGGAGGGC	+
Preference number: 4 (lower is better) Translates to: SHFIRRYPDVNLCLPHVPKSGST*DSGREG Trigger: GCCCTCCCTGCCTGAGTCTCACGTGGATCCGCTCTT...GGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCTTCTGATAAAATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	AGAGGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCTCTTCCTGGGGCATATaGATAATGTGTTCTCTCACA	+
Preference number: 4 (lower is better) Translates to: RGGYGHRLGLGMWCWLAFSSWGI*IMCSLT Trigger: TGTGAGAGAACACATTATTCATATGCCCCAGGAAGA...GAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	CATGATCAAAGGAAGTCAGGACAGGAACTCACGCAGGGCAGGGACCTGGAGGCACTGAGTCAGTTGATCTaGGCTGGAAAAGAGCCAAAG	+
Preference number: 4 (lower is better) Translates to: HDQRKSGQELTQGRDLEALSQLI*AGKEPK Trigger: CTTTGGCTCTTTTCCAGCGCAGATCAACTGACTCAG...TGCCTCCAGGTCCCTGCCCTGCGTGAGTTCCTGTCCTGACTTCCTTTGATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
3UTR CAA 72 bp	AGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATaGTTAGAAGTGTCTTCAGCTGATCTCACTGCTCCA	+
Preference number: 4 (lower is better) Translates to: RATWDHPLQTVI*LEVSSADLTAP Trigger: TGGAGCAGTGAGATCAGCTGAAGACACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCCCTGCAGTGGATATCTaGGAACTTCTTGGCCGGCTG	+
Preference number: 4 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLPAVDI*ELLGRL Trigger: CAGCCGGCCAAGAAGTTCTCAGATATCCACTGCAGG...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	GTGACCTTACATCTTTTTATCAATGCTAACAACTTGGGGCCCTGTCCTGAGCACTGGAGAGCACACAGCTaGCGGAAGAGCGGATCCACG	+
Preference number: 4 (lower is better) Translates to: VTLHLFINANNLGPCPEHWRAHS*RKSGST Trigger: CGTGGATCCGCTCTTCCGCCAGCTGTGTGCTCTCCA...GTGCTCAGGACAGGGCCCCAAGTTGTTAGCATTGATAAAAAGATGTAAGGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	TCAGCTGATCTCACTGCTCCATGCCGTGTGTCCAGGAGAGAAGAGAGGAGGCTATCATCAGGATCTTTTTaGCAGGCCGGAAGCTCTTCA	+
Preference number: 4 (lower is better) Translates to: SADLTAPCRVSRREERRLSSGSF*QAGSSS Trigger: TGAAGAGCTTCCGGCCTGCCAAAAAGATCCTGATGA...TAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR TCA 90 bp	CTTAGTGTGACCTTACATCTTTTTATCAATGCTAACAACTTGGGGCCCTGTCCTAAGAGCGGATCCACGTaGGACTCAGGCAGGGAGGGC	+
Preference number: 4 (lower is better) Translates to: LSVTLHLFINANNLGPCPKSGST*DSGREG Trigger: GCCCTCCCTGCCTGAGTCTCACGTGGATCCGCTCTT...AGGACAGGGCCCCAAGTTGTTAGCATTGATAAAAAGATGTAAGGTCACACTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR GCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCTTATTGTGCTCTTGCTaGCACCTGGGTCCTTGGGGT	+
Preference number: 4 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLLLCSC*HLGPWG Trigger: ACCCCAAGGACCCAGGTGGCAGCAAGAGCACAATAA...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	ATGCCACACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTCTCGTCTGCTGGGCTTaGGGCTGGCCATGGCTGTGC	+
Preference number: 4 (lower is better) Translates to: MPHLEFFLGKMSNIQVRFLVCWA*GWPWLC Trigger: GCACAGCCATGGCCAGCCGCAAGCCCAGCAGACGAG...AAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGTGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	CTAGTTCAAGAATCAAGTACTTGTTCAGTCCGTGAGGCTGGATGTCTCAGCTGGCAATCAAGGGCCTCATaGTGTGGTGGGTGTGGTCGA	+
Preference number: 4 (lower is better) Translates to: LVQESSTCSVREAGCLSWQSRAS*CGGCGR Trigger: TCGACCACACCCACCACACCATGAGGCCCTTGATTG...CCAGCTGAGACATCCAGCCTCACGGACTGAACAAGTACTTGATTCTTGAACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	CAGACAGTCATATTGTTAGAAGTGTCTTCAGCTGATCTCACTGCTCCATGCCGTAGTCCTCGCTCCTCCTaGCGCTTCCTGAGGATTTCC	+
Preference number: 4 (lower is better) Translates to: QTVILLEVSSADLTAPCRSPRSS*RFLRIS Trigger: GGAAATCCTCAGGAAGCGCCAGGAGGAGCGAGGACT...ACGGCATGGAGCAGTGAGATCAGCTGAAGACACTTCTAACAATATGACTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	TCAGCTGATCTCACTGCTCCATGCCGTGTGTCCAGGAGAGAAGAGAGGAGGCTATTCTCTCCAAACTTCTaGAGCTTCATCAGGATCTTT	+
Preference number: 4 (lower is better) Translates to: SADLTAPCRVSRREERRLFSPNF*SFIRIF Trigger: AAAGATCCTGATGAAGCTGCAGAAGTTTGGAGAGAA...TAGCCTCCTCTCTTCTCTCCTGGACACACGGCATGGAGCAGTGAGATCAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TTTGAGCCTGGATCTCACTGCATAGCTCTGGCTGGCCTGGAATTAAAGGTGTCCCTAAAGACAGGATGCTaGGGGCTTTCTTCTGTATCT	+
Preference number: 4 (lower is better) Translates to: FEPGSHCIALAGLELKVSLKTGC*GLSSVS Trigger: AGATACAGAAGAAAGCCCCCAGCATCCTGTCTTTAG...GGACACCTTTAATTCCAGGCCAGCCAGAGCTATGCAGTGAGATCCAGGCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TCTCATTTTATCAGAAGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCCGTCCCCTTTCACTATaGAGACCTGGTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: SHFIRRYPDVNLCLPHVPRPLSL*RPGASS Trigger: AGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACG...GGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCTTCTGATAAAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	GGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCAGGGCTTTCGGGGAAGGCTCTCACAAACTCAATaGCCACTGCAATGTCCGGGG	+
Preference number: 4 (lower is better) Translates to: GKMSNIQVRFIIQGFRGRLSQTQ*PLQCPG Trigger: CCCCGGACATTGCAGTGGCCATTGAGTTTGTGAGAG...CCTTCCCCGAAAGCCCTGGATAATAAATCTAACCTGGATGTTTGACATCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	GTTCTGTCTAGGGAGCCAGACATGTTTAGATCCTTGGTGGATTCTGCCCTGATGGCTGCTTCTTTTTCATaGCATTTTCCTCTCGCAGGA	+
Preference number: 4 (lower is better) Translates to: VLSREPDMFRSLVDSALMAASFS*HFPLAG Trigger: TCCTGCGAGAGGAAAATGCCATGAAAAAGAAGCAGC...CATCAGGGCAGAATCCACCAAGGATCTAAACATGTCTGGCTCCCTAGACAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCAGGTTGTCCCTGCAGTaGATATCTGAGAACTTCTTG	+
Preference number: 4 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLRLSLQ*ISENFL Trigger: CAAGAAGTTCTCAGATATCCACTGCAGGGACAACCT...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	ATGCCACACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTAAGGGCCTCATGGTGTaGTGGGTGTGGTCGATGGTC	+
Preference number: 4 (lower is better) Translates to: MPHLEFFLGKMSNIQVRFKGLMV*WVWSMV Trigger: GACCATCGACCACACCCACCACACCATGAGGCCCTT...AAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGTGTGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	GGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCAGGGCTTTCGGGGAAGGCTGAGTCAGTTGATCTaGGCTGGAAAAGAGCCAAAG	+
Preference number: 4 (lower is better) Translates to: GKMSNIQVRFIIQGFRGRLSQLI*AGKEPK Trigger: CTTTGGCTCTTTTCCAGCGCAGATCAACTGACTCAG...CCTTCCCCGAAAGCCCTGGATAATAAATCTAACCTGGATGTTTGACATCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	TGCATCGCAGTTAACCATTCATCTGTCCCTGAATCTATACTCTACCTGTTCATTATTTCCATCTTGTCCTaGAGGCAGAAGCCGGCCTCC	+
Preference number: 4 (lower is better) Translates to: CIAVNHSSVPESILYLFIISILS*RQKPAS Trigger: GGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAAT...AATGAACAGGTAGAGTATAGATTCAGGGACAGATGAATGGTTAACTGCGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	AAGATTCTAGTTCAAGAATCAAGTACTTGTTCAGTCCGTGAGGCTGGATGTCTCCCTATCTTCACACACTaGATCAGGAAGCGGCTTCGC	+
Preference number: 4 (lower is better) Translates to: KILVQESSTCSVREAGCLPIFTH*IRKRLR Trigger: GCGAAGCCGCTTCCTGATCCAGTGTGTGAAGATAGG...GAGACATCCAGCCTCACGGACTGAACAAGTACTTGATTCTTGAACTAGAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	CTTACAGCAGAATCTCATAGCGGCATTTCCAAGATTCTAGTTCAAGAATCAAGTAAGGGCCTCATGGTGTaGTGGGTGTGGTCGATGGTC	+
Preference number: 4 (lower is better) Translates to: LTAESHSGISKILVQESSKGLMV*WVWSMV Trigger: GACCATCGACCACACCCACCACACCATGAGGCCCTT...ACTTGATTCTTGAACTAGAATCTTGGAAATGCCGCTATGAGATTCTGCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	AAATTTAAAAAGAGTGGAAGAATCCTTTCGAGCCTCTGTCTCCTTGTTTGCAGACGCTCTCCACCAAGATaGTTCTTCGGGCGTCTTCCC	+
Preference number: 4 (lower is better) Translates to: KFKKSGRILSSLCLLVCRRSPPR*FFGRLP Trigger: GGGAAGACGCCCGAAGAACCATCTTGGTGGAGAGCG...TCTGCAAACAAGGAGACAGAGGCTCGAAAGGATTCTTCCACTCTTTTTAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CAA 72 bp	CTGGTTCTGTCTAGGGAGCCAGACATGTTTAGATCCTaGGTGGATTCTGCCCTGATGTATCCTGGTAAAATG	+
Preference number: 4 (lower is better) Translates to: LVLSREPDMFRS*VDSALMYPGKM Trigger: CATTTTACCAGGATACATCAGGGCAGAATCCACCAAGGATCTAAACATGTCTGGCTCCCTAGACAGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	TCTCATTTTATCAGAAGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCGCTGCTTCTTTTTCATaGCATTTTCCTCTCGCAGGA	+
Preference number: 4 (lower is better) Translates to: SHFIRRYPDVNLCLPHVPAASFS*HFPLAG Trigger: TCCTGCGAGAGGAAAATGCCATGAAAAAGAAGCAGC...GGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCTTCTGATAAAATGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	ACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCATGGTGTGGTGGGTGTaGTCGATGGTCAGGGCCTCT	+
Preference number: 4 (lower is better) Translates to: TLNSSLGRCQTSRLDLLSMVWWV*SMVRAS Trigger: AGAGGCCCTGACCATCGACCACACCCACCACACCAT...GGATAATAAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	CCACAGGGTTTATTCAGCTCACACTTCCACATCACTGTTCATGATCAAAGGAAGAGCTTCTGGAGTAGCTaGTGCTTCTTTTTCATGGCA	+
Preference number: 4 (lower is better) Translates to: PQGLFSSHFHITVHDQRKSFWSS*CFFFMA Trigger: TGCCATGAAAAAGAAGCAGCAGCTACTCCAGAAGCT...CTTCCTTTGATCATGAACAGTGATGTGGAAGTGTGAGCTGAATAAACCCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CCA 90 bp	AAATTTAAAAAGAGTGGAAGAATCCTTTCGAGCCTCTGTCTCCTTGTTTGCAGAAGATCGAAGTACCAGTaGTCGGCAATCTCCTCTGCG	+
Preference number: 4 (lower is better) Translates to: KFKKSGRILSSLCLLVCRRSKYQ*SAISSA Trigger: CGCAGAGGAGATTGCCGACCACTGGTACTTCGATCT...TCTGCAAACAAGGAGACAGAGGCTCGAAAGGATTCTTCCACTCTTTTTAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	ATGCCACACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTAGCTTCTGGAGTAGCTaGTGCTTCTTTTTCATGGCA	+
Preference number: 4 (lower is better) Translates to: MPHLEFFLGKMSNIQVRFSFWSS*CFFFMA Trigger: TGCCATGAAAAAGAAGCAGCAGCTACTCCAGAAGCT...AAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGTGTGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	ACCTTGAATTCTTCCTTGGGAAGATGTCAAACATCCAGGTTAGATTTATTATCCGAGGATTTCCTCTTCTaGCTTAGTGGAGGAGGACTC	+
Preference number: 4 (lower is better) Translates to: TLNSSLGRCQTSRLDLLSEDFLF*LSGGGL Trigger: GAGTCCTCCTCCACTAAGCCAGAAGAGGAAATCCTC...GGATAATAAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
3UTR CAA 72 bp	ATTGCCGCACCCAAATGCCACACCTTGAATTCTTCCTaGGGAAGATGTCAAACATCCAGGTTAGATTTATTA	+
Preference number: 4 (lower is better) Translates to: IAAPKCHTLNSS*GRCQTSRLDLL Trigger: TAATAAATCTAACCTGGATGTTTGACATCTTCCCAAGGAAGAATTCAAGGTGTGGCATTTGGGTGCGGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CCA 90 bp	TGCATCGCAGTTAACCATTCATCTGTCCCTGAATCTATACTCTACCTGTTCATTTTTGTTATGTCCTTCTaGAAGTTCGAGGTGACAATG	+
Preference number: 4 (lower is better) Translates to: CIAVNHSSVPESILYLFIFVMSF*KFEVTM Trigger: CATTGTCACCTCGAACTTCCAGAAGGACATAACAAA...AATGAACAGGTAGAGTATAGATTCAGGGACAGATGAATGGTTAACTGCGATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR GCA 90 bp	TGCATCGCAGTTAACCATTCATCTGTCCCTGAATCTATACTCTACCTGTTCATTTACTCACTCTTGATTTaGTTGACTAAAGACAGGATG	+
Preference number: 4 (lower is better) Translates to: CIAVNHSSVPESILYLFIYSLLI*LTKDRM Trigger: CATCCTGTCTTTAGTCAAGCAAATCAAGAGTGAGTA...AATGAACAGGTAGAGTATAGATTCAGGGACAGATGAATGGTTAACTGCGATGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	GCCACTGCAATGTCCGGGGAACACAGCTCCCAGATCCGCAGGTCCTaGAGCACCTTCAGGAGGACGTGGGGCCGGATCCTCAGGTCCAGG	+
Preference number: 5 (lower is better) Translates to: ATAMSGEHSSQIRRS*STFRRTWGRILRSR Trigger: CCTGGACCTGAGGATCCGGCCCCACGTCCTCCTGAAGGTGCTCCAGGACCTGCGGATCTGGGAGCTGTGTTCCCCGGACATTGCAGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	CTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCCTCCACGGCCTCGTCTGCTGGGCTaGCGGCTGGCCATGGCTGTG	+
Preference number: 5 (lower is better) Translates to: LRAQAGLRDVVLACFPPRPRLLG*RLAMAV Trigger: CACAGCCATGGCCAGCCGCAAGCCCAGCAGACGAGG...CCGTGGAGGAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS TCA 90 bp	AGGAGCCAGTGGAGAGCACACAGCTGGCGGAAGAGCGGATCCACGTaGGACTCAGGCAGGGAGGGCGCCATGAGACAGCTGTGGATGGGC	+
Preference number: 5 (lower is better) Translates to: RSQWRAHSWRKSGST*DSGREGAMRQLWMG Trigger: GCCCATCCACAGCTGTCTCATGGCGCCCTCCCTGCCTGAGTCTCACGTGGATCCGCTCTTCCGCCAGCTGTGTGCTCTCCACTGGCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 90 bp	CCCATGGGCTCATCGGAGCCGGGGTTCACTGACATCATACTGCTCTaGGGAGAAGAGCCCCCACTGGTCCGAGTCAGGCTGAGGGTAGAG	+
Preference number: 5 (lower is better) Translates to: PMGSSEPGFTDIILL*GEEPPLVRVRLRVE Trigger: CTCTACCCTCAGCCTGACTCGGACCAGTGGGGGCTCTTCTCCCCAGAGCAGTATGATGTCAGTGAACCCCGGCTCCGATGAGCCCATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	CACAGCTCCCAGATCCGCAGGTCCTGGAGCACCTTCAGGAGGACGTaGGGCCGGATCCTCAGGTCCAGGTTCTCTCCAAACTTCTGCAGC	+
Preference number: 5 (lower is better) Translates to: HSSQIRRSWSTFRRT*GRILRSRFSPNFCS Trigger: GCTGCAGAAGTTTGGAGAGAACCTGGACCTGAGGATCCGGCCCCACGTCCTCCTGAAGGTGCTCCAGGACCTGCGGATCTGGGAGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	TCCAACAGGCAATCAAGGGCCTCATGGTGTGGTGGGTGTGGTCGATaGTCAGGGCCTCTAGGAGCCAGTGGAGAGCACACAGCTGGCGGA	+
Preference number: 5 (lower is better) Translates to: SNRQSRASWCGGCGR*SGPLGASGEHTAGG Trigger: TCCGCCAGCTGTGTGCTCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 90 bp	GGGTCCTTGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTGGTaGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGTGGAGAGCA	+
Preference number: 5 (lower is better) Translates to: GSLGFQQAIKGLMVW*VWSMVRASRSQWRA Trigger: TGCTCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	CCTGGGTCCTTGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTaGTGGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGTGGAGA	+
Preference number: 5 (lower is better) Translates to: PGSLGFQQAIKGLMV*WVWSMVRASRSQWR Trigger: TCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	TGCCACCTGGGTCCTTGGGGTTCCAACAGGCAATCAAGGGCCTCATaGTGTGGTGGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGT	+
Preference number: 5 (lower is better) Translates to: CHLGPWGSNRQSRAS*CGGCGRWSGPLGAS Trigger: ACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGCTGCCACCTGGGTCCTaGGGGTTCCAACAGGCAATC	+
Preference number: 5 (lower is better) Translates to: EGRATWDHPLQTVILLEVLPPGS*GFQQAI Trigger: GATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCAG...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	GACCACCAGCCTAGGGATGGCCCCACCCACGATGGGCTGGGCCCTTCCACATCAATGATCAGCTTCCTTTaGGGGTTCCAACAGGCAATC	+
Preference number: 5 (lower is better) Translates to: DHQPRDGPTHDGLGPSTSMISFL*GFQQAI Trigger: GATTGCCTGTTGGAACCCCAAAAGGAAGCTGATCAT...TGATGTGGAAGGGCCCAGCCCATCGTGGGTGGGGCCATCCCTAGGCTGGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS CCA 90 bp	TTCCTGAGGATTTCCATCTTGTCCTGCAGGCAGAAGCCGGCCTCCTaGGCTACGCTGAAAAACTTGGCCCGCATGTTGCTACACACCCCG	+
Preference number: 5 (lower is better) Translates to: FLRISILSCRQKPAS*ATLKNLARMLLHTP Trigger: CGGGGTGTGTAGCAACATGCGGGCCAAGTTTTTCAGCGTAGCCCAGGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAATCCTCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	TTCCTTTTGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTGGTaGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGTGGAGAGCA	+
Preference number: 5 (lower is better) Translates to: FLLGFQQAIKGLMVW*VWSMVRASRSQWRA Trigger: TGCTCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS CCA 90 bp	AGCTTCCTTTTGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTaGTGGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGTGGAGA	+
Preference number: 5 (lower is better) Translates to: SFLLGFQQAIKGLMV*WVWSMVRASRSQWR Trigger: TCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAAAGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS TCA 90 bp	TTTCCATCTTGTCCTGCAGGCAGAAGCCGGCCTCCTGGGCTACGCTaGAAAACTTGGCCCGCATGTTGCTACACACCCCGGTCTTGCAAT	+
Preference number: 5 (lower is better) Translates to: FPSCPAGRSRPPGLR*KTWPACCYTPRSCN Trigger: ATTGCAAGACCGGGGTGTGTAGCAACATGCGGGCCAAGTTTTTCAGCGTAGCCCAGGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 90 bp	CATGGCTGTGCGGATGGCGGGAGCTTTGTATTTCTTGGTCTTGGGTaGCGTGACGAAGTGATCCCACCTCTGCCCCATGGACTTGTCCTT	+
Preference number: 5 (lower is better) Translates to: HGCADGGSFVFLGLG*RDEVIPPLPHGLVL Trigger: AAGGACAAGTCCATGGGGCAGAGGTGGGATCACTTCGTCACGGCACCCAAGACCAAGAAATACAAAGCTCCCGCCATCCGCACAGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	GAGGTGACAATGAAGGAGTGGAACTTCTGGAGTCCTCGCTCCTCCTaGCGCTTCCTGAGGATTTCCATCTTGTCCTGCAGGCAGAAGCCG	+
Preference number: 5 (lower is better) Translates to: EVTMKEWNFWSPRSS*RFLRISILSCRQKP Trigger: CGGCTTCTGCCTGCAGGACAAGATGGAAATCCTCAGGAAGCGCCAGGAGGAGCGAGGACTCCAGAAGTTCCACTCCTTCATTGTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	GAGGGGAGGGCCACCTGGGACCACCCTCTCCAGACAGTCATATTGTTAGAAGTGGGCCTGCTGAGTCAGTaGATCTGCGCTGGAAAAGAG	+
Preference number: 5 (lower is better) Translates to: EGRATWDHPLQTVILLEVGLLSQ*ICAGKE Trigger: CTCTTTTCCAGCGCAGATCAACTGACTCAGCAGGCC...CACTTCTAACAATATGACTGTCTGGAGAGGGTGGTCCCAGGTGGCCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	AGAGGAGGCTACGGGCACAGGCTGGGCTTAGGGATGTGGTGCTGGCTTGCTTTCTTCTTTATTGTGCTCTaGCTGCCACCTGGGTCCTTG	+
Preference number: 5 (lower is better) Translates to: RGGYGHRLGLGMWCWLAFFFIVL*LPPGSL Trigger: CAAGGACCCAGGTGGCAGCAAGAGCACAATAAAGAA...GAAAGCAAGCCAGCACCACATCCCTAAGCCCAGCCTGTGCCCGTAGCCTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 90 bp	AGGACGTGGGGCCGGATCCTCAGGTCCAGGTTCTCTCCAAACTTCTaGAGCTTCATCAGGATCTTTTTGGCAGGCCGGAAGCTCTTCAGA	+
Preference number: 5 (lower is better) Translates to: RTWGRILRSRFSPNF*SFIRIFLAGRKLFR Trigger: TCTGAAGAGCTTCCGGCCTGCCAAAAAGATCCTGATGAAGCTGCAGAAGTTTGGAGAGAACCTGGACCTGAGGATCCGGCCCCACGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 90 bp	AACTCTGCTCTTCGACTTCTTCTGGATCACCTGGATGTGGCTCTCTaGGCTTGTAGTGCTGGACCGCTCGCTGGATTTGTGTGTGGTCTG	+
Preference number: 5 (lower is better) Translates to: NSALRLLLDHLDVAL*ACSAGPLAGFVCGL Trigger: CAGACCACACACAAATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	CTCTTCAGATCCTCAGGGAGTTTGGACAGCAGATCGAAGTACCAGTaGTCGGCAATCTCCTCTGCGTCCCCTTTCACTATGGAGACCTGG	+
Preference number: 5 (lower is better) Translates to: LFRSSGSLDSRSKYQ*SAISSASPFTMETW Trigger: CCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGACCACTGGTACTTCGATCTGCTGTCCAAACTCCCTGAGGATCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	GGATCTTTTTGGCAGGCCGGAAGCTCTTCAGATCCTCAGGGAGTTTaGACAGCAGATCGAAGTACCAGTGGTCGGCAATCTCCTCTGCGT	+
Preference number: 5 (lower is better) Translates to: GSFWQAGSSSDPQGV*TADRSTSGRQSPLR Trigger: ACGCAGAGGAGATTGCCGACCACTGGTACTTCGATCTGCTGTCCAAACTCCCTGAGGATCTGAAGAGCTTCCGGCCTGCCAAAAAGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	AGCAGGTTGTCCCTGCAGTGGATATCTGAGAACTTCTTGGCCGGCTaGAACTTGTTTAGCTCCTCCTCCTTCAGCTTCTGGAGTAGCTGC	+
Preference number: 5 (lower is better) Translates to: SRLSLQWISENFLAG*NLFSSSSFSFWSSC Trigger: GCAGCTACTCCAGAAGCTGAAGGAGGAGGAGCTAAACAAGTTCCAGCCGGCCAAGAAGTTCTCAGATATCCACTGCAGGGACAACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 90 bp	TCACGGTTAACTCTGCTCTTCGACTTCTTCTGGATCACCTGGATGTaGCTCTCTGCGCTTGTAGTGCTGGACCGCTCGCTGGATTTGTGT	+
Preference number: 5 (lower is better) Translates to: SRLTLLFDFFWITWM*LSALVVLDRSLDLC Trigger: ACACAAATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGTTAACCGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	ATGATGTCACGGTTAACTCTGCTCTTCGACTTCTTCTGGATCACCTaGATGTGGCTCTCTGCGCTTGTAGTGCTGGACCGCTCGCTGGAT	+
Preference number: 5 (lower is better) Translates to: MMSRLTLLFDFFWIT*MWLSALVVLDRSLD Trigger: ATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGTTAACCGTGACATCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	CGAAGTACCAGTGGTCGGCAATCTCCTCTGCGTCCCCTTTCACTATaGAGACCTGGTGCCTCATCTTTGTTATGTCCTTCTGGAAGTTCG	+
Preference number: 5 (lower is better) Translates to: RSTSGRQSPLRPLSL*RPGASSLLCPSGSS Trigger: CGAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGACCACTGGTACTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS TCA 90 bp	GTAGCTGCTGCTTCTTTTTCATGGCATTTTCCTCTCGCAGGATGTTaGAGTAGCCTCGGCCTATCTTCACACACTGGATCAGGAAGCGGC	+
Preference number: 5 (lower is better) Translates to: VAAASFSWHFPLAGC*SSLGLSSHTGSGSG Trigger: GCCGCTTCCTGATCCAGTGTGTGAAGATAGGCCGAGGCTACTTCAACATCCTGCGAGAGGAAAATGCCATGAAAAAGAAGCAGCAGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS GCA 90 bp	TGGTCGGCAATCTCCTCTGCGTCCCCTTTCACTATGGAGACCTGGTaGCTCATCTTTGTTATGTCCTTCTGGAAGTTCGAGGTGACAATG	+
Preference number: 5 (lower is better) Translates to: WSAISSASPFTMETW*LIFVMSFWKFEVTM Trigger: CATTGTCACCTCGAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 90 bp	GAGTTTGGACAGCAGATCGAAGTACCAGTGGTCGGCAATCTCCTCTaGGTCCCCTTTCACTATGGAGACCTGGTGCCTCATCTTTGTTAT	+
Preference number: 5 (lower is better) Translates to: EFGQQIEVPVVGNLL*VPFHYGDLVPHLCY Trigger: ATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGACCACTGGTACTTCGATCTGCTGTCCAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS TCA 90 bp	ATGGCGGGAGCTTTGTATTTCTTGGTCTTGGGTGCCGTGACGAAGTaGTCCCACCTCTGCCCCATGGACTTGTCCTTGTTAATCTTCTTT	+
Preference number: 5 (lower is better) Translates to: MAGALYFLVLGAVTK*SHLCPMDLSLLIFF Trigger: AAAGAAGATTAACAAGGACAAGTCCATGGGGCAGAGGTGGGATCACTTCGTCACGGCACCCAAGACCAAGAAATACAAAGCTCCCGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	GTGACCTTACATCTTTTTATCAATGCTAACAACTTGGGGCCCTGTCCTGAGCACGGCCTGCTGAGTCAGTaGATCTGCGCTGGAAAAGAG	+
Preference number: 5 (lower is better) Translates to: VTLHLFINANNLGPCPEHGLLSQ*ICAGKE Trigger: CTCTTTTCCAGCGCAGATCAACTGACTCAGCAGGCC...GTGCTCAGGACAGGGCCCCAAGTTGTTAGCATTGATAAAAAGATGTAAGGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS-3UTR CAA 90 bp	TTTGAGCCTGGATCTCACTGCATAGCTCTGGCTGGCCTGGAATTAAAGGTGTCCCCTGGTGCCTCATCTTaGTTATGTCCTTCTGGAAGT	+
Preference number: 5 (lower is better) Translates to: FEPGSHCIALAGLELKVSPGASS*LCPSGS Trigger: ACTTCCAGAAGGACATAACAAAGATGAGGCACCAGG...GGACACCTTTAATTCCAGGCCAGCCAGAGCTATGCAGTGAGATCCAGGCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 90 bp	GGCTGGAACTTGTTTAGCTCCTCCTCCTTCAGCTTCTGGAGTAGCTaGTGCTTCTTTTTCATGGCATTTTCCTCTCGCAGGATGTTGAAG	+
Preference number: 5 (lower is better) Translates to: GWNLFSSSSFSFWSS*CFFFMAFSSRRMLK Trigger: CTTCAACATCCTGCGAGAGGAAAATGCCATGAAAAAGAAGCAGCAGCTACTCCAGAAGCTGAAGGAGGAGGAGCTAAACAAGTTCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS GCA 90 bp	TTGTGTGTGGTCTGCCACTCCTTCCATCCATACTCACTCTTGATTTaGTTGACTAAAGACAGGATGCTGGGGGCTTTCTTCTGTATCTCG	+
Preference number: 5 (lower is better) Translates to: LCVVCHSFHPYSLLI*LTKDRMLGAFFCIS Trigger: CGAGATACAGAAGAAAGCCCCCAGCATCCTGTCTTTAGTCAAGCAAATCAAGAGTGAGTATGGATGGAAGGAGTGGCAGACCACACACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 90 bp	CCTTTCACTATGGAGACCTGGTGCCTCATCTTTGTTATGTCCTTCTaGAAGTTCGAGGTGACAATGAAGGAGTGGAACTTCTGGAGTCCT	+
Preference number: 5 (lower is better) Translates to: PFTMETWCLIFVMSF*KFEVTMKEWNFWSP Trigger: AGGACTCCAGAAGTTCCACTCCTTCATTGTCACCTCGAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	TCTGGCTGGCCTGGAATTAAAGGTGTCCACTACCATCCCTGGCAGGGTAGAGTATCCTTGTCTATATATTaGGAGTTCTTCGCTGTCTTG	+
Preference number: 5 (lower is better) Translates to: SGWPGIKGVHYHPWQGRVSLSIY*EFFAVL Trigger: CAAGACAGCGAAGAACTCCAAATATATAGACAAGGA...TACTCTACCCTGCCAGGGATGGTAGTGGACACCTTTAATTCCAGGCCAGCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	CACGTGTGCACACATACATGCCATTTCTTTATGTGCATCGCAGTTAACCATTCACGGATGGCGGGAGCTTaGTATTTCTTGGTCTTGGGT	+
Preference number: 5 (lower is better) Translates to: HVCTHTCHFFMCIAVNHSRMAGA*YFLVLG Trigger: ACCCAAGACCAAGAAATACAAAGCTCCCGCCATCCG...TGAATGGTTAACTGCGATGCACATAAAGAAATGGCATGTATGTGTGCACACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	AGGTATCCTGATGTCAACCTCTGCCTTCCACATGTGCCCATGCACAGCATGAATCATCCATACTCACTCTaGATTTGCTTGACTAAAGAC	+
Preference number: 5 (lower is better) Translates to: RYPDVNLCLPHVPMHSMNHPYSL*ICLTKD Trigger: GTCTTTAGTCAAGCAAATCAAGAGTGAGTATGGATG...ATTCATGCTGTGCATGGGCACATGTGGAAGGCAGAGGTTGACATCAGGATACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	AAATTTAAAAAGAGTGGAAGAATCCTTTCGAGCCTCTGTCTCCTTGTTTGCAGACTGAGGATTTCCATCTaGTCCTGCAGGCAGAAGCCG	+
Preference number: 5 (lower is better) Translates to: KFKKSGRILSSLCLLVCRLRISI*SCRQKP Trigger: CGGCTTCTGCCTGCAGGACAAGATGGAAATCCTCAG...TCTGCAAACAAGGAGACAGAGGCTCGAAAGGATTCTTCCACTCTTTTTAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	CCTAGCAGCACACGAAAAAGACAGAGTGGTAGAAGGCCACTCAATGTTCACCTCAGGTTTGCTATCTCCTaGTCTATATATTTGGAGTTC	+
Preference number: 5 (lower is better) Translates to: PSSTRKRQSGRRPLNVHLRFAIS*SIYLEF Trigger: GAACTCCAAATATATAGACAAGGAGATAGCAAACCT...GAGGTGAACATTGAGTGGCCTTCTACCACTCTGTCTTTTTCGTGTGCTGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS-3UTR CAA 90 bp	CTTAGTGTGACCTTACATCTTTTTATCAATGCTAACAACTTGGGGCCCTGTCCTTCCTTGTCTATATATTaGGAGTTCTTCGCTGTCTTG	+
Preference number: 5 (lower is better) Translates to: LSVTLHLFINANNLGPCPSLSIY*EFFAVL Trigger: CAAGACAGCGAAGAACTCCAAATATATAGACAAGGA...AGGACAGGGCCCCAAGTTGTTAGCATTGATAAAAAGATGTAAGGTCACACTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS CAA 72 bp	CGAGTCAGGCTGAGGGTAGAGCCTCGTCTGCTGGGCTaGCGGCTGGCCATGGCTGTGCGGATGGCGGGAGCT	+
Preference number: 6 (lower is better) Translates to: RVRLRVEPRLLG*RLAMAVRMAGA Trigger: AGCTCCCGCCATCCGCACAGCCATGGCCAGCCGCAAGCCCAGCAGACGAGGCTCTACCCTCAGCCTGACTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS TCA 72 bp	TGGAGAGCACACAGCTGGCGGAAGAGCGGATCCACGTaGGACTCAGGCAGGGAGGGCGCCATGAGACAGCTG	+
Preference number: 6 (lower is better) Translates to: WRAHSWRKSGST*DSGREGAMRQL Trigger: CAGCTGTCTCATGGCGCCCTCCCTGCCTGAGTCTCACGTGGATCCGCTCTTCCGCCAGCTGTGTGCTCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 72 bp	TGGGTGTGGTCGATGGTCAGGGCCTCTAGGAGCCAGTaGAGAGCACACAGCTGGCGGAAGAGCGGATCCACG	+
Preference number: 6 (lower is better) Translates to: WVWSMVRASRSQ*RAHSWRKSGST Trigger: CGTGGATCCGCTCTTCCGCCAGCTGTGTGCTCTCCACTGGCTCCTAGAGGCCCTGACCATCGACCACACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CAA 72 bp	CCTCGCTCCTCCTGGCGCTTCCTGAGGATTTCCATCTaGTCCTGCAGGCAGAAGCCGGCCTCCTGGGCTACG	+
Preference number: 6 (lower is better) Translates to: PRSSWRFLRISI*SCRQKPASWAT Trigger: CGTAGCCCAGGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAATCCTCAGGAAGCGCCAGGAGGAGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	CAGATCCGCAGGTCCTGGAGCACCTTCAGGAGGACGTaGGGCCGGATCCTCAGGTCCAGGTTCTCTCCAAAC	+
Preference number: 6 (lower is better) Translates to: QIRRSWSTFRRT*GRILRSRFSPN Trigger: GTTTGGAGAGAACCTGGACCTGAGGATCCGGCCCCACGTCCTCCTGAAGGTGCTCCAGGACCTGCGGATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	AGCCTCGTCTGCTGGGCTTGCGGCTGGCCATGGCTGTaGGGATGGCGGGAGCTTTGTATTTCTTGGTCTTGG	+
Preference number: 6 (lower is better) Translates to: SLVCWACGWPWL*GWRELCISWSW Trigger: CCAAGACCAAGAAATACAAAGCTCCCGCCATCCGCACAGCCATGGCCAGCCGCAAGCCCAGCAGACGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TCATCGGAGCCGGGGTTCACTGACATCATACTGCTCTaGGGAGAAGAGCCCCCACTGGTCCGAGTCAGGCTG	+
Preference number: 6 (lower is better) Translates to: SSEPGFTDIILL*GEEPPLVRVRL Trigger: CAGCCTGACTCGGACCAGTGGGGGCTCTTCTCCCCAGAGCAGTATGATGTCAGTGAACCCCGGCTCCGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TTGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTaGTGGGTGTGGTCGATGGTCAGGGCCTCTAGGAGC	+
Preference number: 6 (lower is better) Translates to: LGFQQAIKGLMV*WVWSMVRASRS Trigger: GCTCCTAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 72 bp	GGTCCTTGGGGTTCCAACAGGCAATCAAGGGCCTCATaGTGTGGTGGGTGTGGTCGATGGTCAGGGCCTCTA	+
Preference number: 6 (lower is better) Translates to: GPWGSNRQSRAS*CGGCGRWSGPL Trigger: TAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	TTCTGGAGTCCTCGCTCCTCCTGGCGCTTCCTGAGGATTTCCATCTaGTCCTGCAGGCAGAAGCCGGCCTCCTGGGCTACGCTGAAAAAC	+
Preference number: 6 (lower is better) Translates to: FWSPRSSWRFLRISI*SCRQKPASWATLKN Trigger: GTTTTTCAGCGTAGCCCAGGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAATCCTCAGGAAGCGCCAGGAGGAGCGAGGACTCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	GCGGATGGCGGGAGCTTTGTATTTCTTGGTCTTGGGTaGCGTGACGAAGTGATCCCACCTCTGCCCCATGGA	+
Preference number: 6 (lower is better) Translates to: ADGGSFVFLGLG*RDEVIPPLPHG Trigger: TCCATGGGGCAGAGGTGGGATCACTTCGTCACGGCACCCAAGACCAAGAAATACAAAGCTCCCGCCATCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TGGGGGCTTTCTTCTGTATCTCGCTCTCCACCAAGATaGTTCTTCGGGCGTCTTCCCGGACCATCTCCAGCA	+
Preference number: 6 (lower is better) Translates to: WGLSSVSRSPPR*FFGRLPGPSPA Trigger: TGCTGGAGATGGTCCGGGAAGACGCCCGAAGAACCATCTTGGTGGAGAGCGAGATACAGAAGAAAGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	ACTCTGCTCTTCGACTTCTTCTGGATCACCTGGATGTaGCTCTCTGCGCTTGTAGTGCTGGACCGCTCGCTG	+
Preference number: 6 (lower is better) Translates to: TLLFDFFWITWM*LSALVVLDRSL Trigger: CAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TCCTTTTGGGGTTCCAACAGGCAATCAAGGGCCTCATaGTGTGGTGGGTGTGGTCGATGGTCAGGGCCTCTA	+
Preference number: 6 (lower is better) Translates to: SFWGSNRQSRAS*CGGCGRWSGPL Trigger: TAGAGGCCCTGACCATCGACCACACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS CAA 72 bp	GGCTTAGTGGAGGAGGACTCATTGTCTTCGATGTCTTaGCTGCCCATGGGCTCATCGGAGCCGGGGTTCACT	+
Preference number: 6 (lower is better) Translates to: GLVEEDSLSSMS*LPMGSSEPGFT Trigger: AGTGAACCCCGGCTCCGATGAGCCCATGGGCAGCAAAGACATCGAAGACAATGAGTCCTCCTCCACTAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS TCA 72 bp	TGGCGGGAGCTTTGTATTTCTTGGTCTTGGGTGCCGTaGCGAAGTGATCCCACCTCTGCCCCATGGACTTGT	+
Preference number: 6 (lower is better) Translates to: WRELCISWSWVP*RSDPTSAPWTC Trigger: ACAAGTCCATGGGGCAGAGGTGGGATCACTTCGTCACGGCACCCAAGACCAAGAAATACAAAGCTCCCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	CTTCGACTTCTTCTGGATCACCTGGATGTGGCTCTCTaGGCTTGTAGTGCTGGACCGCTCGCTGGATTTGTG	+
Preference number: 6 (lower is better) Translates to: LRLLLDHLDVAL*ACSAGPLAGFV Trigger: CACAAATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	CAGCAGATCGAAGTACCAGTGGTCGGCAATCTCCTCTaGGTCCCCTTTCACTATGGAGACCTGGTGCCTCAT	+
Preference number: 6 (lower is better) Translates to: QQIEVPVVGNLL*VPFHYGDLVPH Trigger: ATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGCCGACCACTGGTACTTCGATCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	GGCCGGATCCTCAGGTCCAGGTTCTCTCCAAACTTCTaGAGCTTCATCAGGATCTTTTTGGCAGGCCGGAAG	+
Preference number: 6 (lower is better) Translates to: GRILRSRFSPNF*SFIRIFLAGRK Trigger: CTTCCGGCCTGCCAAAAAGATCCTGATGAAGCTGCAGAAGTTTGGAGAGAACCTGGACCTGAGGATCCGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	CGGTTAACTCTGCTCTTCGACTTCTTCTGGATCACCTaGATGTGGCTCTCTGCGCTTGTAGTGCTGGACCGC	+
Preference number: 6 (lower is better) Translates to: RLTLLFDFFWIT*MWLSALVVLDR Trigger: GCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGTTAACCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	ATTTCCATCTTGTCCTGCAGGCAGAAGCCGGCCTCCTaGGCTACGCTGAAAAACTTGGCCCGCATGTTGCTA	+
Preference number: 6 (lower is better) Translates to: ISILSCRQKPAS*ATLKNLARMLL Trigger: TAGCAACATGCGGGCCAAGTTTTTCAGCGTAGCCCAGGAGGCCGGCTTCTGCCTGCAGGACAAGATGGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 72 bp	CTCTCTGCGCTTGTAGTGCTGGACCGCTCGCTGGATTaGTGTGTGGTCTGCCACTCCTTCCATCCATACTCA	+
Preference number: 6 (lower is better) Translates to: LSALVVLDRSLD*CVVCHSFHPYS Trigger: TGAGTATGGATGGAAGGAGTGGCAGACCACACACAAATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	AGGATCTTTTTGGCAGGCCGGAAGCTCTTCAGATCCTCAGGGAGTTaGGACAGCAGATCGAAGTACCAGTGGTCGGCAATCTCCTCTGCG	+
Preference number: 6 (lower is better) Translates to: RIFLAGRKLFRSSGS*DSRSKYQWSAISSA Trigger: CGCAGAGGAGATTGCCGACCACTGGTACTTCGATCTGCTGTCCAAACTCCCTGAGGATCTGAAGAGCTTCCGGCCTGCCAAAAAGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	AGGAGGACTCATTGTCTTCGATGTCTTTGCTGCCCATaGGCTCATCGGAGCCGGGGTTCACTGACATCATAC	+
Preference number: 6 (lower is better) Translates to: RRTHCLRCLCCP*AHRSRGSLTSY Trigger: GTATGATGTCAGTGAACCCCGGCTCCGATGAGCCCATGGGCAGCAAAGACATCGAAGACAATGAGTCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TGGAAGTTCGAGGTGACAATGAAGGAGTGGAACTTCTaGAGTCCTCGCTCCTCCTGGCGCTTCCTGAGGATT	+
Preference number: 6 (lower is better) Translates to: WKFEVTMKEWNF*SPRSSWRFLRI Trigger: AATCCTCAGGAAGCGCCAGGAGGAGCGAGGACTCCAGAAGTTCCACTCCTTCATTGTCACCTCGAACTTCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	TCCTCTTCTGGCTTAGTGGAGGAGGACTCATTGTCTTCGATGTCTTaGCTGCCCATGGGCTCATCGGAGCCGGGGTTCACTGACATCATA	+
Preference number: 6 (lower is better) Translates to: SSSGLVEEDSLSSMS*LPMGSSEPGFTDII Trigger: TATGATGTCAGTGAACCCCGGCTCCGATGAGCCCATGGGCAGCAAAGACATCGAAGACAATGAGTCCTCCTCCACTAAGCCAGAAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	TGGATGTGGCTCTCTGCGCTTGTAGTGCTGGACCGCTCGCTGGATTaGTGTGTGGTCTGCCACTCCTTCCATCCATACTCACTCTTGATT	+
Preference number: 6 (lower is better) Translates to: WMWLSALVVLDRSLD*CVVCHSFHPYSLLI Trigger: AATCAAGAGTGAGTATGGATGGAAGGAGTGGCAGACCACACACAAATCCAGCGAGCGGTCCAGCACTACAAGCGCAGAGAGCCACATCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	GTAGTGCTGGACCGCTCGCTGGATTTGTGTGTGGTCTaGCACTCCTTCCATCCATACTCACTCTTGATTTGC	+
Preference number: 6 (lower is better) Translates to: VVLDRSLDLCVV*HSFHPYSLLIC Trigger: GCAAATCAAGAGTGAGTATGGATGGAAGGAGTGGCAGACCACACACAAATCCAGCGAGCGGTCCAGCACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	TCCCTGCAGTGGATATCTGAGAACTTCTTGGCCGGCTaGAACTTGTTTAGCTCCTCCTCCTTCAGCTTCTGG	+
Preference number: 6 (lower is better) Translates to: SLQWISENFLAG*NLFSSSSFSFW Trigger: CCAGAAGCTGAAGGAGGAGGAGCTAAACAAGTTCCAGCCGGCCAAGAAGTTCTCAGATATCCACTGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 72 bp	TCTTCTTTATTGTGCTCTTGCTGCCACCTGGGTCCTTaGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGT	+
Preference number: 6 (lower is better) Translates to: SSLLCSCCHLGP*GSNRQSRASWC Trigger: ACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCAGCAAGAGCACAATAAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 72 bp	ATCTTCTTTATTGTGCTCTTGCTGCCACCTGGGTCCTaGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTG	+
Preference number: 6 (lower is better) Translates to: IFFIVLLLPPGS*GFQQAIKGLMV Trigger: CACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCAGCAAGAGCACAATAAAGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 72 bp	TCATCCCAATCTGGGTCCTGCATGATCAGCTTCCTTTaGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTG	+
Preference number: 6 (lower is better) Translates to: SSQSGSCMISFL*GFQQAIKGLMV Trigger: CACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAAAGGAAGCTGATCATGCAGGACCCAGATTGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS CAA 90 bp	TTGTCCCTGCAGTGGATATCTGAGAACTTCTTGGCCGGCTGGAACTaGTTTAGCTCCTCCTCCTTCAGCTTCTGGAGTAGCTGCTGCTTC	+
Preference number: 6 (lower is better) Translates to: LSLQWISENFLAGWN*FSSSSFSFWSSCCF Trigger: GAAGCAGCAGCTACTCCAGAAGCTGAAGGAGGAGGAGCTAAACAAGTTCCAGCCGGCCAAGAAGTTCTCAGATATCCACTGCAGGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CAA 90 bp	CTCTGCCCCATGGACTTGTCCTTGTTAATCTTCTTTATTGTGCTCTaGCTGCCACCTGGGTCCTTGGGGTTCCAACAGGCAATCAAGGGC	+
Preference number: 6 (lower is better) Translates to: LCPMDLSLLIFFIVL*LPPGSLGFQQAIKG Trigger: GCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCAGCAAGAGCACAATAAAGAAGATTAACAAGGACAAGTCCATGGGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	TCGTTGTTTTCATCCCAATCTGGGTCCTGCATGATCAGCTTCCTTTaGGGGTTCCAACAGGCAATCAAGGGCCTCATGGTGTGGTGGGTG	+
Preference number: 6 (lower is better) Translates to: SLFSSQSGSCMISFL*GFQQAIKGLMVWWV Trigger: CACCCACCACACCATGAGGCCCTTGATTGCCTGTTGGAACCCCAAAAGGAAGCTGATCATGCAGGACCCAGATTGGGATGAAAACAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086483.4
CDS TCA 72 bp	GCTTTGTATTTCTTGGTCTTGGGTGCCGTGACGAAGTaGTCCCACCTCTGCCCCATGGACTTGTCCTTGTTA	+
Preference number: 6 (lower is better) Translates to: ALYFLVLGAVTK*SHLCPMDLSLL Trigger: TAACAAGGACAAGTCCATGGGGCAGAGGTGGGATCACTTCGTCACGGCACCCAAGACCAAGAAATACAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 72 bp	CAGTGGATATCTGAGAACTTCTTGGCCGGCTGGAACTaGTTTAGCTCCTCCTCCTTCAGCTTCTGGAGTAGC	+
Preference number: 6 (lower is better) Translates to: QWISENFLAGWN*FSSSSFSFWSS Trigger: GCTACTCCAGAAGCTGAAGGAGGAGGAGCTAAACAAGTTCCAGCCGGCCAAGAAGTTCTCAGATATCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CAA 72 bp	AGGATTTCCTCTTCTGGCTTAGTGGAGGAGGACTCATaGTCTTCGATGTCTTTGCTGCCCATGGGCTCATCG	+
Preference number: 6 (lower is better) Translates to: RISSSGLVEEDS*SSMSLLPMGSS Trigger: CGATGAGCCCATGGGCAGCAAAGACATCGAAGACAATGAGTCCTCCTCCACTAAGCCAGAAGAGGAAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	ATCTCCTCTGCGTCCCCTTTCACTATGGAGACCTGGTaGCTCATCTTTGTTATGTCCTTCTGGAAGTTCGAG	+
Preference number: 6 (lower is better) Translates to: ISSASPFTMETW*LIFVMSFWKFE Trigger: CTCGAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	CTTGTTAATCTTCTTTATTGTGCTCTTGCTGCCACCTaGGTCCTTGGGGTTCCAACAGGCAATCAAGGGCCT	+
Preference number: 6 (lower is better) Translates to: LVNLLYCALAAT*VLGVPTGNQGP Trigger: AGGCCCTTGATTGCCTGTTGGAACCCCAAGGACCCAGGTGGCAGCAAGAGCACAATAAAGAAGATTAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	ATGATGTCACGGTTAACTCTGCTCTTCGACTTCTTCTaGATCACCTGGATGTGGCTCTCTGCGCTTGTAGTG	+
Preference number: 6 (lower is better) Translates to: MMSRLTLLFDFF*ITWMWLSALVV Trigger: CACTACAAGCGCAGAGAGCCACATCCAGGTGATCCAGAAGAAGTCGAAGAGCAGAGTTAACCGTGACATCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CCA 72 bp	GCAATCTCCTCTGCGTCCCCTTTCACTATGGAGACCTaGTGCCTCATCTTTGTTATGTCCTTCTGGAAGTTC	+
Preference number: 6 (lower is better) Translates to: AISSASPFTMET*CLIFVMSFWKF Trigger: GAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCATAGTGAAAGGGGACGCAGAGGAGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS CAA 90 bp	TGTGTGGTCTGCCACTCCTTCCATCCATACTCACTCTTGATTTGCTaGACTAAAGACAGGATGCTGGGGGCTTTCTTCTGTATCTCGCTC	+
Preference number: 6 (lower is better) Translates to: CVVCHSFHPYSLLIC*TKDRMLGAFFCISL Trigger: GAGCGAGATACAGAAGAAAGCCCCCAGCATCCTGTCTTTAGTCAAGCAAATCAAGAGTGAGTATGGATGGAAGGAGTGGCAGACCACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	TTTAGCTCCTCCTCCTTCAGCTTCTGGAGTAGCTGCTaGTTCTTTTTCATGGCATTTTCCTCTCGCAGGATG	+
Preference number: 6 (lower is better) Translates to: FSSSSFSFWSSC*FFFMAFSSRRM Trigger: CATCCTGCGAGAGGAAAATGCCATGAAAAAGAAGCAGCAGCTACTCCAGAAGCTGAAGGAGGAGGAGCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS TCA 72 bp	GCTTCTTTTTCATGGCATTTTCCTCTCGCAGGATGTTaGAGTAGCCTCGGCCTATCTTCACACACTGGATCA	+
Preference number: 6 (lower is better) Translates to: ASFSWHFPLAGC*SSLGLSSHTGS Trigger: TGATCCAGTGTGTGAAGATAGGCCGAGGCTACTTCAACATCCTGCGAGAGGAAAATGCCATGAAAAAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4
CDS CCA 72 bp	ATGGAGACCTGGTGCCTCATCTTTGTTATGTCCTTCTaGAAGTTCGAGGTGACAATGAAGGAGTGGAACTTC	+
Preference number: 6 (lower is better) Translates to: METWCLIFVMSF*KFEVTMKEWNF Trigger: GAAGTTCCACTCCTTCATTGTCACCTCGAACTTCCAGAAGGACATAACAAAGATGAGGCACCAGGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050178.13
CDS GCA 72 bp	CAGGAAGCGGCTTCGCATAAGATCCTTCTTAAGGTTTaGTATCTCCTTGTCTATATATTTGGAGTTCTTCGC	+
Preference number: 6 (lower is better) Translates to: QEAASHKILLKV*YLLVYIFGVLR Trigger: GCGAAGAACTCCAAATATATAGACAAGGAGATAGCAAACCTTAAGAAGGATCTTATGCGAAGCCGCTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050178.13 ENSMUST00000086483.4

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