Pregenerated sensors for CCDC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048701Ensembl transcript IDs: ENSMUST00000135607.2, ENSMUST00000147545.8, ENSMUST00000156001.8
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTTAGAGCCCAGAGGTGCTGGTGGGGTGCTGGGTGCGTGGACTTaGTTCTGTACAAAGGCAAGGTCGTCGGGGAGCAGAGCCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SLEPRGAGGVLGAWT*FCTKARSSGSRALA Trigger: GGCCAGGGCTCTGCTCCCCGACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGGCTCTAAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CCA 90 bp | GAAAGCAGTTTAGAGCCCAGAGGTGCTGGTGGGGTGCTGGGTGCGTaGACTTGGTTCTGTACAAAGGCAAGGTCGTCGGGGAGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: ESSLEPRGAGGVLGA*TWFCTKARSSGSRA Trigger: GGCTCTGCTCCCCGACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGGCTCTAAACTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | ACGCGTCAGATCCAAGTACGCCGGGAGAGGAGAAGCCTTTGGCGTTaGGAAGGTGGCTCCATCAGACGAGTCCCAACTGGAGATTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: TRQIQVRRERRSLWR*EGGSIRRVPTGDSD Trigger: GTCAGAATCTCCAGTTGGGACTCGTCTGATGGAGCCACCTTCTCAACGCCAAAGGCTTCTCCTCTCCCGGCGTACTTGGATCTGACGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR GCA 90 bp | GTGGAGAAAGTCGTCTGGTTAGTGTTGCGGACCCGCAACCTCGGCTaGGTTTCCGACGAACATTCACGACACGACGAGGAGGGAAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: VEKVVWLVLRTRNLG*VSDEHSRHDEEGKV Trigger: TACCTTTCCCTCCTCGTCGTGTCGTGAATGTTCGTCGGAAACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGACTTTCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | TGTCCCCACCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTaGAGGAATGGCGGATTGAGTTCAGAACCTTCTTGGTGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CPHPHPPPAKQKDLC*RNGGLSSEPSWCSP Trigger: AGGAGAGCACCAAGAAGGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGGTGGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CCA 90 bp | GACAGACGCGGAGATTCAAGTAAAACACTGGTGGAGAAAGTCGTCTaGTTAGTGTTGCGGACCCGCAACCTCGGCTGCGTTTCCGACGAA | + |
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Preference number: 1 (lower is better) Translates to: DRRGDSSKTLVEKVV*LVLRTRNLGCVSDE Trigger: TTCGTCGGAAACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGACTTTCTCCACCAGTGTTTTACTTGAATCTCCGCGTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATaGCGGATTGAGTTCAGAACCTTCTTGGTGCTCTCCTGGCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: PTPTPGQTEGFVLKE*RIEFRTFLVLSWLS Trigger: ACTTAGCCAGGAGAGCACCAAGAAGGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | CTGACTCGGACTGCAAAGCGCTTGTGGGAAGAGCTGGGTTTGAGGTaGACTGATGGGTCTACAGGAATCCCAGGTACACTTTATGCATCA | + |
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Preference number: 1 (lower is better) Translates to: LTRTAKRLWEELGLR*TDGSTGIPGTLYAS Trigger: TGATGCATAAAGTGTACCTGGGATTCCTGTAGACCCATCAGTTCACCTCAAACCCAGCTCTTCCCACAAGCGCTTTGCAGTCCGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR GCA 90 bp | GAGGGCATGGTGGCATCTGGCTCTCCCCTCTTCCTTGTCGACATCTaGCCAAGTTACAGTCGGCTTTCTTTCCAAACAAAGTCCCAAATA | + |
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Preference number: 1 (lower is better) Translates to: EGMVASGSPLFLVDI*PSYSRLSFQTKSQI Trigger: TATTTGGGACTTTGTTTGGAAAGAAAGCCGACTGTAACTTGGGCAGATGTCGACAAGGAAGAGGGGAGAGCCAGATGCCACCATGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | TCGGACTGCAAAGCGCTTGTGGGAAGAGCTGGGTTTGAGGTGAACTaGTGGGTCTACAGGAATCCCAGGTACACTTTATGCATCAATGTC | + |
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Preference number: 1 (lower is better) Translates to: SDCKALVGRAGFEVN*WVYRNPRYTLCINV Trigger: GACATTGATGCATAAAGTGTACCTGGGATTCCTGTAGACCCATCAGTTCACCTCAAACCCAGCTCTTCCCACAAGCGCTTTGCAGTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR GCA 90 bp | GGTGTCTGTCGCCTACCCCTCAGACATTATTTCCTAACAGCATTTTaGACCTGGAAAGTACCTGTTTGCACCCTCTGTCTCAGGACAACA | + |
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Preference number: 1 (lower is better) Translates to: GVCRLPLRHYFLTAF*TWKVPVCTLCLRTT Trigger: TGTTGTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCAGGTGCAAAATGCTGTTAGGAAATAATGTCTGAGGGGTAGGCGACAGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | ATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTaGCTACTAAAGCACAAAGTAACCTCGGACAGACAGAGACGAAGG | + |
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Preference number: 1 (lower is better) Translates to: IHGIYKYANTGRGST*LLKHKVTSDRQRRR Trigger: CCTTCGTCTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CCA 90 bp | TGTACCATGAAGGAAGAATTCCTCTGTCTATCCTCAGAATTTCCCTaGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGGTGGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: CTMKEEFLCLSSEFP*NGHVPRGLGSWWKM Trigger: CATTTTCCACCAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGACAGAGGAATTCTTCCTTCATGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | GAACGGACCTGTGTGCTGGAGGATAAAGCTGCTAGCCAGCAGTACTaGAATCTACAATCCCAGAAAAGATTTTGTAAACACATACCGTAC | + |
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Preference number: 1 (lower is better) Translates to: ERTCVLEDKAASQQY*NLQSQKRFCKHIPY Trigger: GTACGGTATGTGTTTACAAAATCTTTTCTGGGATTGTAGATTTCAGTACTGCTGGCTAGCAGCTTTATCCTCCAGCACACAGGTCCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | CTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTAAACGTCACTaGCCTGGAGAAGGAAGGTTTCTAAACAGCTCGGTAATTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LNCSAEFLVMFGKRH*PGEGRFLNSSVIFL Trigger: CAGGAAAATTACCGAGCTGTTTAGAAACCTTCCTTCTCCAGGTCAGTGACGTTTACCGAACATAACCAAGAATTCAGCACTACAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR TCA 90 bp | TCATCTAACTTCCAATCCTACAGTGAGTTAGGTCTGCAAAAGGTCTaGACTGTAGTGCTGAATTCTTGGTTATGTTCGGTAAACGTCACT | + |
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Preference number: 1 (lower is better) Translates to: SSNFQSYSELGLQKV*TVVLNSWLCSVNVT Trigger: AGTGACGTTTACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAACTCACTGTAGGATTGGAAGTTAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 90 bp | CAGTTTAGAGCCCAGAGGTGCTGGTGGGGTGCTGGGTGCGTGGACTaGGTTCTGTACAAAGGCAAGGTCGTCGGGGAGCAGAGCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QFRAQRCWWGAGCVD*VLYKGKVVGEQSPG Trigger: GCCAGGGCTCTGCTCCCCGACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGGCTCTAAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTAAGGGTTGGAGGGGGTaGGGTAGGGTTTGCACACCG | + |
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Preference number: 2 (lower is better) Translates to: PTPTPGQTEGFVLKEWRIKGWRG*GRVCTP Trigger: CGGTGTGCAAACCCTACCCCACCCCCTCCAACCCTT...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTAGAGCCCAGAGGTGCTaGTGGGGTGCTGGGTGCGTG | + |
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Preference number: 2 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCRAQRC*WGAGCV Trigger: CACGCACCCAGCACCCCACCAGCACCTCTGGGCTCT...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 90 bp | AATGCAAACGCGTCAGATCCAAGTACGCCGGGAGAGGAGAAGCCTTaGGCGTTGAGAAGGTGGCTCCATCAGACGAGTCCCAACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NANASDPSTPGEEKP*ALRRWLHQTSPNWR Trigger: TCTCCAGTTGGGACTCGTCTGATGGAGCCACCTTCTCAACGCCAAAGGCTTCTCCTCTCCCGGCGTACTTGGATCTGACGCGTTTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTGTGCTGGTGGGGTGCTaGGTGCGTGGACTTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCVLVGC*VRGLGS Trigger: AGAACCAAGTCCACGCACCCAGCACCCCACCAGCAC...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 90 bp | CCTCTGTCTCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATaGGCTGTTACAATCTCACGGCCCACCCGCAGCAGGGATCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: PLSQDNTKEWMGLAA*AVTISRPTRSRDLS Trigger: GCTTAGATCCCTGCTGCGGGTGGGCCGTGAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGAGACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTTGGAAAGTACCTGTTTaGACCCTCTGTCTCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: PTPTPGQTEGFVLKEWRIWKVPV*TLCLRT Trigger: TGTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCA...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 90 bp | GGAGATTCAAGTAAAACACTGGTGGAGAAAGTCGTCTGGTTAGTGTaGCGGACCCGCAACCTCGGCTGCGTTTCCGACGAACATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: GDSSKTLVEKVVWLV*RTRNLGCVSDEHSR Trigger: TCGTGAATGTTCGTCGGAAACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGACTTTCTCCACCAGTGTTTTACTTGAATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGAGAAGCCTTTGGCGTTaGGAAGGTGGCTCCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: SILRISLEWSCTKRVGELRSLWR*EGGSIR Trigger: TCTGATGGAGCCACCTTCTCAACGCCAAAGGCTTCT...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAGCCAATGATAAAAGGCACAGCAGCCTGAGCCATCAAAGCCACATTCCGGGGAAGAGCTGGGTTTaGGGTGAACTGATGGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SEANDKRHSSLSHQSHIPGKSWV*GELMGL Trigger: TAGACCCATCAGTTCACCTCAAACCCAGCTCTTCCC...CGGAATGTGGCTTTGATGGCTCAGGCTGCTGTGCCTTTTATCATTGGCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTCAGAACGGACCTGTGTaGTGGAGGATAAAGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCQNGPV*WRIKLL Trigger: TAGCAGCTTTATCCTCCAGCACACAGGTCCGTTCTG...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGCCAATGATAAAAGGCACAGCAGCCTGAGCCATCAAAGCCACATTCCGGGGCGCCGGCTTAGGTaGATTAACATTGAGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SEANDKRHSSLSHQSHIPGRRLR*INIEKG Trigger: TCCTTTCTCAATGTTAATCCACCTAAGCCGGCGCCC...CGGAATGTGGCTTTGATGGCTCAGGCTGCTGTGCCTTTTATCATTGGCTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTCATCGAGACCCTTGGTaGGAAAGCGTCTCTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGHRDPW*ESVSPL Trigger: GAGAGGAGAGACGCTTTCCCACCAAGGGTCTCGATG...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGGGAGATACGGCTGTGTaGTTTGTTTCTATAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GQGKHLTTKAQSNLGQTEGDTAV*FVSIGC Trigger: ACAGCCTATAGAAACAAATCACACAGCCGTATCTCC...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCTTGGCGTTGAGAAGGTaGCTCCATCAGACGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLLALRR*LHQTSP Trigger: GGGACTCGTCTGATGGAGCCACCTTCTCAACGCCAA...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGACAGCATTTTGCACCTaGAAAGTACCTGTTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: GQGKHLTTKAQSNLGQTETAFCT*KVPVCT Trigger: GGTGCAAACAGGTACTTTCCAGGTGCAAAATGCTGT...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACCAGAAGGATTTGTGCTaGAGGAATGGCGGATTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PSTAYINMQTRAGEALDYQKDLC*RNGGLS Trigger: ACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTG...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTCTAGACTACATGTTGTaGGCACTGGTTCATCTAACT | + |
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Preference number: 2 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCLDYML*ALVHLT Trigger: AGTTAGATGAACCAGTGCCCACAACATGTAGTCTAG...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTATGTACCAAGAGGGTTaGGGAGCTGGTGGAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGMYQEG*GAGGKC Trigger: GCATTTTCCACCAGCTCCCCAACCCTCTTGGTACAT...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTTTCGGTAAACGTCACTaGCCTGGAGAAGGAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGFGKRH*PGEGRF Trigger: AAACCTTCCTTCTCCAGGTCAGTGACGTTTACCGAA...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGGACAACACAAAAGAATaGATGGGTTTAGCCGCATTG | + |
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Preference number: 2 (lower is better) Translates to: SILRISLEWSCTKRVGELDNTKE*MGLAAL Trigger: CAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTC...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTGGTCTGCAAAAGGTCTaGACTGTAGTGCTGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGGLQKV*TVVLNS Trigger: AGAATTCAGCACTACAGTTCAGACCTTTTGCAGACC...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGGTAGTGCTGAATTCTTaGTTATGTTCGGTAAACGTC | + |
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Preference number: 2 (lower is better) Translates to: SILRISLEWSCTKRVGELVVLNS*LCSVNV Trigger: GACGTTTACCGAACATAACCAAGAATTCAGCACTAC...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTTTTGTGCTGAAGGAATaGCGGATTGAGTTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGFVLKE*RIEFRT Trigger: GGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAA...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGGTTTTACAAAGGACATaGTGGTCAATTTACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: GQGKHLTTKAQSNLGQTEVLQRT*WSIYIR Trigger: TCTGATGTAAATTGACCACCATGTCCTTTGTAAAAC...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTTCCTCAGAATTTCCCTaGAATGGTCATGTACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGSSEFP*NGHVPR Trigger: TCTTGGTACATGACCATTCCAGGGAAATTCTGAGGA...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 90 bp | CAGACATTATTTCCTAACAGCATTTTGCACCTGGAAAGTACCTGTTaGCACCCTCTGTCTCAGGACAACACAAAAGAATGGATGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: QTLFPNSILHLESTC*HPLSQDNTKEWMGL Trigger: TAAACCCATCCATTCTTTTGTGTTGTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCAGGTGCAAAATGCTGTTAGGAAATAATGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTCAGTTTTCCTACAACTaGAGGATCAACACAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: NNKLSETRNGHASSRFPGQFSYN*RINTNS Trigger: TGAATTTGTGTTGATCCTTCAGTTGTAGGAAAACTG...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCATTCAAGTAAAACACTaGTGGAGAAAGTCGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLIQVKH*WRKSSG Trigger: ACCAGACGACTTTCTCCACCAGTGTTTTACTTGAAT...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CCA 72 bp | CCCAGAGGTGCTGGTGGGGTGCTGGGTGCGTGGACTTaGTTCTGTACAAAGGCAAGGTCGTCGGGGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PRGAGGVLGAWT*FCTKARSSGSR Trigger: TCTGCTCCCCGACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | GTCGTCTGGTTAGTGTTGCGGACCCGCAACCTCGGCTaGGTTTCCGACGAACATTCACGACACGACGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVWLVLRTRNLG*VSDEHSRHDEE Trigger: CTCCTCGTCGTGTCGTGAATGTTCGTCGGAAACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | AGGGTTGGAGGGGGTGGGGTAGGGTTTGCACACCGCTaGTCATTACCAGATACCAGACAGCGACGTTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVGGGGVGFAHR*SLPDTRQRRSS Trigger: GCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGCAAACCCTACCCCACCCCCTCCAACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | TTCTCTTGGTTCTTAACCCCTGCAGGGACCGGGGACTaGCTCGGACTGCAAAGCGCTTGTGGGAAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSWFLTPAGTGD*LGLQSACGKSW Trigger: CCAGCTCTTCCCACAAGCGCTTTGCAGTCCGAGTCAGTCCCCGGTCCCTGCAGGGGTTAAGAACCAAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | CAGTTTAGAGCCCAGAGGTGCTGGTGGGGTGCTGGGTaGGTGGACTTGGTTCTGTACAAAGGCAAGGTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFRAQRCWWGAG*VDLVLYKGKVV Trigger: GACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGGCTCTAAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGGTCGTCTGGTTAGTGTaGCGGACCCGCAACCTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGKHLTTKAQSNLGQTEVVWLV*RTRNLG Trigger: GCCGAGGTTGCGGGTCCGCAACACTAACCAGACGAC...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | ATCCAAGTACGCCGGGAGAGGAGAAGCCTTTGGCGTTaGGAAGGTGGCTCCATCAGACGAGTCCCAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: IQVRRERRSLWR*EGGSIRRVPTG Trigger: TCCAGTTGGGACTCGTCTGATGGAGCCACCTTCTCAACGCCAAAGGCTTCTCCTCTCCCGGCGTACTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | GATCCTCTAGTGTTTGTTCTCTTGGTTCTTAACCCCTaGAGGGACCGGGGACTGACTCGGACTGCAAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: DPLVFVLLVLNP*RDRGLTRTAKR Trigger: GCGCTTTGCAGTCCGAGTCAGTCCCCGGTCCCTGCAGGGGTTAAGAACCAAGAGAACAAACACTAGAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | CCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTaGAGGAATGGCGGATTGAGTTCAGAACCTTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PHPPPAKQKDLC*RNGGLSSEPSW Trigger: CCAAGAAGGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | CTCGGACTGCAAAGCGCTTGTGGGAAGAGCTGGGTTTaGGGTGAACTGATGGGTCTACAGGAATCCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGLQSACGKSWV*GELMGLQESQV Trigger: TACCTGGGATTCCTGTAGACCCATCAGTTCACCTCAAACCCAGCTCTTCCCACAAGCGCTTTGCAGTCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CCA 72 bp | GGAGATTCAAGTAAAACACTGGTGGAGAAAGTCGTCTaGTTAGTGTTGCGGACCCGCAACCTCGGCTGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: GDSSKTLVEKVV*LVLRTRNLGCV Trigger: AACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGACTTTCTCCACCAGTGTTTTACTTGAATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CCA 72 bp | ACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATaGCGGATTGAGTTCAGAACCTTCTTGGTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPGQTEGFVLKE*RIEFRTFLVLS Trigger: GGAGAGCACCAAGAAGGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CCA 72 bp | CAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTaGGGAGCTGGTGGAAAATGCCCGGGGTTTAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QNFPGMVMYQEG*GAGGKCPGFSQ Trigger: CTGACTAAACCCCGGGCATTTTCCACCAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | ACTGCAAAGCGCTTGTGGGAAGAGCTGGGTTTGAGGTaGACTGATGGGTCTACAGGAATCCCAGGTACACTT | + |
|
Preference number: 3 (lower is better) Translates to: TAKRLWEELGLR*TDGSTGIPGTL Trigger: AAGTGTACCTGGGATTCCTGTAGACCCATCAGTTCACCTCAAACCCAGCTCTTCCCACAAGCGCTTTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | AGAGGTGACCTGGGTGTGACCAGTAATCACAACTGCTaGGCATTCTGGGAAATGCTCCCCAACACATTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RGDLGVTSNHNC*AFWEMLPNTLG Trigger: GCCTAATGTGTTGGGGAGCATTTCCCAGAATGCTCAGCAGTTGTGATTACTGGTCACACCCAGGTCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | ACAGTGGAGGGAAGAACTTTCCAGAACGGACCTGTGTaGTGGAGGATAAAGCTGCTAGCCAGCAGTACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TVEGRTFQNGPV*WRIKLLASSTE Trigger: TTCAGTACTGCTGGCTAGCAGCTTTATCCTCCAGCACACAGGTCCGTTCTGGAAAGTTCTTCCCTCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | GTGGCATCTGGCTCTCCCCTCTTCCTTGTCGACATCTaGCCAAGTTACAGTCGGCTTTCTTTCCAAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VASGSPLFLVDI*PSYSRLSFQTK Trigger: CTTTGTTTGGAAAGAAAGCCGACTGTAACTTGGGCAGATGTCGACAAGGAAGAGGGGAGAGCCAGATGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACCTGGAAAGTACCTGTTaGCACCCTCTGTCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSTAYINMQTRAGEALDYLESTC*HPLSQD Trigger: GTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCAG...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTaGATTTTTAGGACCTCTGCTCGCTCCGGTCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSLHVVVGN*IFRTSARSGRP Trigger: TGGCCGACCGGAGCGAGCAGAGGTCCTAAAAATTCAATTCCCAACAACCACATGAAGGCTTACAACCATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
||
| 3UTR TCA 72 bp | TTCCCGTCCCACGCACGTGGGGGAGATACGGCTGTGTaGTTTGTTTCTATAGGCTGTTTTACAAAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: FPSHARGGDTAV*FVSIGCFTKDM Trigger: CATGTCCTTTGTAAAACAGCCTATAGAAACAAATCACACAGCCGTATCTCCCCCACGTGCGTGGGACGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | CCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTaGGTTCAGAACCTTCTTGGTGCTCTCCTGGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PNRRICAEGMAD*VQNLLGALLAK Trigger: CTTAGCCAGGAGAGCACCAAGAAGGTTCTGAACTCAATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CCA 72 bp | AAGGAAGAATTCCTCTGTCTATCCTCAGAATTTCCCTaGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KEEFLCLSSEFP*NGHVPRGLGSW Trigger: CCAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGACAGAGGAATTCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAGCCAATGATAAAAGGCACAGCAGCCTGAGCCATCAAAGCCACATTCCGTTTCCTAACAGCATTTaGCACCTGGAAAGTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SEANDKRHSSLSHQSHIPFPNSI*HLESTC Trigger: ACAGGTACTTTCCAGGTGCAAAATGCTGTTAGGAAA...CGGAATGTGGCTTTGATGGCTCAGGCTGCTGTGCCTTTTATCATTGGCTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | AGCAGACGTTCTTCCAAAGGAATGCGTTCCAGCCTGTaGTACCTGCAACCTTGTGGTTTTGTTGTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SRRSSKGMRSSL*YLQPCGFVVVV Trigger: AACAACAACAACAAAACCACAAGGTTGCAGGTAGCACAGGCTGGAACGCATTCCTTTGGAAGAACGTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CCA 72 bp | CCCCTCAGACATTATTTCCTAACAGCATTTTGCACCTaGAAAGTACCTGTTTGCACCCTCTGTCTCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLRHYFLTAFCT*KVPVCTLCLRT Trigger: TGTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCAGGTGCAAAATGCTGTTAGGAAATAATGTCTGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR GCA 72 bp | TTCCTAACAGCATTTTGCACCTGGAAAGTACCTGTTTaGACCCTCTGTCTCAGGACAACACAAAAGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLTAFCTWKVPV*TLCLRTTQKNG Trigger: TCCATTCTTTTGTGTTGTCCTGAGACAGAGGGTGCAAACAGGTACTTTCCAGGTGCAAAATGCTGTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | ATATATAAATATGCAAACACGGGCAGGGGAAGCACTTaGCTACTAAAGCACAAAGTAACCTCGGACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: IYKYANTGRGST*LLKHKVTSDRQ Trigger: CTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | AGCATTCTCAGTTTAGGGGTGGACGAGAAAGAAGAGTaGAAGGTCCTATGGTTGTTCTTACTCTCAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SILSLGVDEKEE*KVLWLFLLSSS Trigger: AGAACTTGAGAGTAAGAACAACCATAGGACCTTTCACTCTTCTTTCTCGTCCACCCCTAAACTGAGAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | TTCCAATCCTACAGTGAGTTAGGTCTGCAAAAGGTCTaGACTGTAGTGCTGAATTCTTGGTTATGTTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FQSYSELGLQKV*TVVLNSWLCSV Trigger: TACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAACTCACTGTAGGATTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR TCA 72 bp | TGTGTGCTGGAGGATAAAGCTGCTAGCCAGCAGTACTaGAATCTACAATCCCAGAAAAGATTTTGTAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: CVLEDKAASQQY*NLQSQKRFCKH Trigger: GTGTTTACAAAATCTTTTCTGGGATTGTAGATTTCAGTACTGCTGGCTAGCAGCTTTATCCTCCAGCACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR GCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGGCCGAGCAGGACGACTaGATGGCTGCCGGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMAEQDD*MAAGPP Trigger: CGGCGGCCCGGCAGCCATGCAGTCGTCCTGCTCGGC...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CAA 72 bp | GCCCAGAGGTGCTGGTGGGGTGCTGGGTGCGTGGACTaGGTTCTGTACAAAGGCAAGGTCGTCGGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRCWWGAGCVD*VLYKGKVVGEQ Trigger: CTGCTCCCCGACGACCTTGCCTTTGTACAGAACCAAGTCCACGCACCCAGCACCCCACCAGCACCTCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGGAGGGGACCGCGGGCTaGATGGGAGGTGGTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGKHLTTKAQSNLGQTEEGTAG*MGGGGG Trigger: GCCGCCACCACCTCCCATGCAGCCCGCGGTCCCCTC...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR GCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGTGGTCACGCTGGCTTTaGGCAGGTCGCGGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMWSRWL*AGRGSP Trigger: AGGAGAACCGCGACCTGCGCAAAGCCAGCGTGACCA...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGCTTGGATGGTCACGCTaGCTTTGCGCAGGTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMLGWSR*LCAGRG Trigger: ACCGCGACCTGCGCAAAGCCAGCGTGACCATCCAAG...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTCTTCCTGCTCAGCCCTaGCTTGGATGGTCACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPTPGQTEGFVLKEWRILPAQP*LGWSRW Trigger: CCAGCGTGACCATCCAAGCCAGGGCTGAGCAGGAAG...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGGAAGCACTTGACTACTAAAGCACAAAGTAACCTCGGACAGACAGAGCCGGGCTCTGTGTGTTaGGAGACGGAGGCGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGKHLTTKAQSNLGQTEPGSVC*ETEAAW Trigger: CCACGCCGCCTCCGTCTCCCAACACACAGAGCCCGG...CTCTGTCTGTCCGAGGTTACTTTGTGCTTTAGTAGTCAAGTGCTTCCCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGCATCCATCTCCAGGCTaGACTCGCTCTCCGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMHPSPG*TRSPRA Trigger: AGCTCTCGGAGAGCGAGTCCAGCCTGGAGATGGATG...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTAGGCGTGTAAGGGATTaGGCTGGACACAGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPTPGQTEGFVLKEWRIRRVRD*AGHSAR Trigger: CCTCGCACTGTGTCCAGCCCAATCCCTTACACGCCT...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACCTGCATGGGAGGTGGTaGCGGCGGCGGAGGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYLHGRW*RRRRRL Trigger: CAACCGCCTCCGCCGCCGCCACCACCTCCCATGCAG...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CAA 72 bp | GATCCAAGTACGCCGGGAGAGGAGAAGCCTTTGGCGTaGAGAAGGTGGCTCCATCAGACGAGTCCCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSTPGEEKPLA*RRWLHQTSPNW Trigger: CCAGTTGGGACTCGTCTGATGGAGCCACCTTCTCAACGCCAAAGGCTTCTCCTCTCCCGGCGTACTTGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR TCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGGCAGCGCCTTGCACTTaGGTTTGTAGGTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMAAPCT*VCRSPA Trigger: AGCTGGAGACCTACAAACTCAAGTGCAAGGCGCTGC...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTAGCGCCTCCTGCTCTTaGTCCAGTGTGTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPTPGQTEGFVLKEWRISASCS*SSVFSR Trigger: CCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCT...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGTCCTCCTCCAAGTACTaGGCCATCTTCTCCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMSSSKY*AIFSEC Trigger: ACACTCGGAGAAGATGGCCCAGTACTTGGAGGAGGA...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTGGCGGCGGAGGCGGTTaGACCGGGCTCTGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSETRNGHASSRFPGGGGGG*TGLCVL Trigger: CAACACACAGAGCCCGGTCCAACCGCCTCCGCCGCC...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTTCTCCAGCTCTATCTTaGGCACCTTGTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPTPGQTEGFVLKEWRISPALS*APCSPA Trigger: AGCAGGAGAACAAGGTGCTCAAGATAGAGCTGGAGA...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGACCTTGTTCTCCTGCTaGAGCGAGGCCAGGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SILRISLEWSCTKRVGELTLFSC*SEARRL Trigger: CAACCGCCTGGCCTCGCTGCAGCAGGAGAACAAGGT...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CAA 72 bp | AGTAAAACACTGGTGGAGAAAGTCGTCTGGTTAGTGTaGCGGACCCGCAACCTCGGCTGCGTTTCCGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKTLVEKVVWLV*RTRNLGCVSDE Trigger: TTCGTCGGAAACGCAGCCGAGGTTGCGGGTCCGCAACACTAACCAGACGACTTTCTCCACCAGTGTTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| 3UTR CAA 72 bp | CAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATaGGCTGTTACAATCTCACGGCCCACCCGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDNTKEWMGLAA*AVTISRPTRSR Trigger: CCTGCTGCGGGTGGGCCGTGAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCGAGTCTCGAGACCGGGTCAGAGGTaGGGTGCTGCCCGCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSKLYFLVGNFCKRTRVSRPGQR*GAARSG Trigger: TCCGGAGCGGGCAGCACCTCACCTCTGACCCGGTCT...CGAGACTCGGGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135607.2 |
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| CDS-3UTR GCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTAGCACCTTGTTCTCCTaGTGCAGCGAGGCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSETRNGHASSRFPGSTLFS*CSEARR Trigger: CCGCCTGGCCTCGCTGCAGCAGGAGAACAAGGTGCT...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAGCCAATGATAAAAGGCACAGCAGCCTGAGCCATCAAAGCCACATTCCGGATGTCTCTAGGCGATaGTGGGGCAGACACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEANDKRHSSLSHQSHIPDVSRR*WGRHRL Trigger: CAGCCTGTGTCTGCCCCACCATCGCCTAGAGACATC...CGGAATGTGGCTTTGATGGCTCAGGCTGCTGTGCCTTTTATCATTGGCTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR TCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACACGACGTTGGCGGTGTaGAGCCAACCGTGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYTTLAV*SQPCDL Trigger: CAAGTCACACGGTTGGCTTCACACCGCCAACGTCGT...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | GAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATGGGTCAGAGGTGAGGTaGTGCCCGCTCCGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EYTVAVQMVVSLHVVVGNGSEVR*CPLRTR Trigger: TCTTGTCCGGAGCGGGCAGCACCTCACCTCTGACCC...ATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135607.2 |
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| CDS-3UTR CCA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTTGTAAGGGATTGGGCTaGACACAGTGCGAGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCCKGLG*TQCEVS Trigger: TGAGACCTCGCACTGTGTCCAGCCCAATCCCTTACA...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTCAGCCCTGGCTTGGATaGTCACGCTGGCTTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSETRNGHASSRFPGQPWLG*SRWLCA Trigger: TGCGCAAAGCCAGCGTGACCATCCAAGCCAGGGCTG...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACTGCTCAGCCCTGGCTTaGATGGTCACGCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYCSALA*MVTLAL Trigger: CAAAGCCAGCGTGACCATCCAAGCCAGGGCTGAGCA...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGTTCTCTTCCCTCATGTaGCGCTCCTCCTCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SILRISLEWSCTKRVGELFSSLM*RSSSKY Trigger: GTACTTGGAGGAGGAGCGGCACATGAGGGAAGAGAA...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | TGGTCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCTTACTGTGATGCCGTaGGAGGCCCCCATGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPHSKLYFLVGNFCKRTLTVMP*EAPMCC Trigger: GCAGCACATGGGGGCCTCCCACGGCATCACAGTAAG...GGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135607.2 |
||
| CDS-3UTR TCA 90 bp | TCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCGAACGACGTTGGCGGTGTaGAGCCAACCGTGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSKLYFLVGNFCKRTRTTLAV*SQPCDL Trigger: CAAGTCACACGGTTGGCTTCACACCGCCAACGTCGT...TCGGGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR GCA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCTCGCGGTTCTCCTCCTaGAGCGCCTTGCACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLSRFSS*SALHLS Trigger: ACTCAAGTGCAAGGCGCTGCAGGAGGAGAACCGCGA...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | TCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCGACATCCATCTCCAGGCTaGACTCGCTCTCCGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPHSKLYFLVGNFCKRTRHPSPG*TRSPRA Trigger: AGCTCTCGGAGAGCGAGTCCAGCCTGGAGATGGATG...TCGGGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR CCA 90 bp | GAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATAGGCGTGTAAGGGATTaGGCTGGACACAGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EYTVAVQMVVSLHVVVGNRRVRD*AGHSAR Trigger: CCTCGCACTGTGTCCAGCCCAATCCCTTACACGCCT...ATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGTCCTTCTGCAAGGCCTaGATTTTCTTGAATAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMSFCKA*IFLNKV Trigger: CACTTTATTCAAGAAAATCCAGGCCTTGCAGAAGGA...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | GTTAGGTCTGCAAAAGGTCTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTGTCTCTAGGCGATGGTaGGGCAGACACAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRSAKGLNCSAEFLVMFGVSRRW*GRHRLV Trigger: GACCAGCCTGTGTCTGCCCCACCATCGCCTAGAGAC...ACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCGAGTCTCGACGACGTTGGCGGTGTaGAGCCAACCGTGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSKLYFLVGNFCKRTRVSTTLAV*SQPCDL Trigger: CAAGTCACACGGTTGGCTTCACACCGCCAACGTCGT...CGAGACTCGGGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR TCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACATCAGCTTGTTGACCTaGAACTCCTGTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYISLLT*NSCSCS Trigger: GGAGCAGGAACAGGAGTTTCAGGTCAACAAGCTGAT...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTTTGGGCTGGACACAGTaGGAGGTCTCAATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSETRNGHASSRFPGLGWTQ*EVSILV Trigger: CACAAGGATTGAGACCTCGCACTGTGTCCAGCCCAA...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CCA 90 bp | CACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTGAATCATCCATCTCCAGGCTaGACTCGCTCTCCGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTDGCKPSCGCWELNHPSPG*TRSPRA Trigger: AGCTCTCGGAGAGCGAGTCCAGCCTGGAGATGGATG...ATTCAATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR GCA 90 bp | GTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTGTTCTCTTCCCTCATGTaGCGCTCCTCCTCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHCSCTDGCKPSCGCWELFSSLM*RSSSKY Trigger: GTACTTGGAGGAGGAGCGGCACATGAGGGAAGAGAA...CAATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156001.8 |
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| CDS-3UTR CCA 90 bp | TGGTCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCTGTAAGGGATTGGGCTaGACACAGTGCGAGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSPHSKLYFLVGNFCKRTCKGLG*TQCEVS Trigger: TGAGACCTCGCACTGTGTCCAGCCCAATCCCTTACA...GGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR TCA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCGGGAGAGCTCATTGGTaGGAAACTCCTCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLGRAHW*ETPLPS Trigger: AGAAGGAAGAGGAGTTTCTCACCAATGAGCTCTCCC...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | CACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTGAATTTGGGCTGGACACAGTaGGAGGTCTCAATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCSCTDGCKPSCGCWELNLGWTQ*EVSILV Trigger: CACAAGGATTGAGACCTCGCACTGTGTCCAGCCCAA...ATTCAATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR GCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACGTTTCTTTCTCCTTCTaGAAGGCCTGGATTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYVSFSF*KAWIFL Trigger: CAAGAAAATCCAGGCCTTGCAGAAGGAGAAAGAAAC...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR TCA 90 bp | GTTAGGTCTGCAAAAGGTCTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTTCTTCATCAGCTTGTTaGCCTGAAACTCCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSAKGLNCSAEFLVMFGSSSAC*PETPVP Trigger: AGGAACAGGAGTTTCAGGTCAACAAGCTGATGAAGA...ACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR TCA 90 bp | CCATCCACGGCATATATAAATATGCAAACACGGGCAGGGGAAGCACTTGACTACCGTTCTTTAAAAACCTaGTATGCCTCATCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTAYINMQTRAGEALDYRSLKT*YASSCS Trigger: AGAACATGATGAGGCATATCAGGTTTTTAAAGAACG...GTAGTCAAGTGCTTCCCCTGCCCGTGTTTGCATATTTATATATGCCGTGGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| 3UTR CAA 72 bp | AATAATTTGGAAACAGGAGGTTTACTATGCATGTCTTaGGTAGGCATCGCTACAAGCTCTCAGCGTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NNLETGGLLCMS*VGIATSSQRGL Trigger: TAACCCACGCTGAGAGCTTGTAGCGATGCCTACCAAAGACATGCATAGTAAACCTCCTGTTTCCAAATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTAGGTCTCAATCCTTGTaGAGACATCTCATTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSETRNGHASSRFPGRSQSL*RHLIKI Trigger: TATTTTAATGAGATGTCTGCACAAGGATTGAGACCT...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR GCA 90 bp | CTCCGGTGGTCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGAGGTCTCAATCCTTGTaGAGACATCTCATTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRWSPHSKLYFLVGNFCKRSQSL*RHLIKI Trigger: TATTTTAATGAGATGTCTGCACAAGGATTGAGACCT...CTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGACCACCGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR GCA 90 bp | TCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGCGAACCCGAAGGTCTCAATCCTTGTaGAGACATCTCATTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SPHSKLYFLVGNFCKRTRRSQSL*RHLIKI Trigger: TATTTTAATGAGATGTCTGCACAAGGATTGAGACCT...TCGGGTTCGCTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS GCA 90 bp | CCCGCCGCTGCCGCCCGAGGTCGCCGAGCAGGACGACTGCATGGCTaGCGGGCCGCCGCCCGCCGCGTCCGTGTCGCTCTCGCTCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAAAARGRRAGRLHG*RAAARRVRVALARA Trigger: AGCGCGAGCGAGAGCGACACGGACGCGGCGGGCGGCGGCCCGGCAGCCATGCAGTCGTCCTGCTCGGCGACCTCGGGCGGCAGCGGCGGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 90 bp | AGGCGGCGTGGGCCGTTTAAACTTGTCAGGGCTGCTGCTTCTCCGTaGCGATGGCCTTGTGATGCCGTGGGAGGCCCCCATGTGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRGPFKLVRAAASP*RWPCDAVGGPHVLH Trigger: GTGCAGCACATGGGGGCCTCCCACGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACAAGTTTAAACGGCCCACGCCGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 90 bp | TCCGAGAGCTGGCGACACAGCGCTTCCCTCCTCTCCATCTCCCTCTaGAGCTTCCGCTGTAGCCGCAGGTTCTCTTCCCTCATGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SESWRHSASLLSISL*SFRCSRRFSSLMCR Trigger: GCGGCACATGAGGGAAGAGAACCTGCGGCTACAGCGGAAGCTCCAGAGGGAGATGGAGAGGAGGGAAGCGCTGTGTCGCCAGCTCTCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS-3UTR CAA 90 bp | GCACACCGCTGCTCATTACCAGATACCAGACAGCGACGTTCCAGCCAGGGAATGACCGGGCTCTGTGTGTaGGGAGACGGAGGCGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AHRCSLPDTRQRRSSQGMTGLCV*GDGGGV Trigger: CACGCCGCCTCCGTCTCCCAACACACAGAGCCCGGT...CATTCCCTGGCTGGAACGTCGCTGTCTGGTATCTGGTAATGAGCAGCGGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 90 bp | TACCTCTCATCATCCATCTCCAGGCTGGACTCGCTCTCCGAGAGCTaGCGACACAGCGCTTCCCTCCTCTCCATCTCCCTCTGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLSSSISRLDSLSES*RHSASLLSISLWSF Trigger: GAAGCTCCAGAGGGAGATGGAGAGGAGGGAAGCGCTGTGTCGCCAGCTCTCGGAGAGCGAGTCCAGCCTGGAGATGGATGATGAGAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS GCA 90 bp | TCCCTCTGGAGCTTCCGCTGTAGCCGCAGGTTCTCTTCCCTCATGTaGCGCTCCTCCTCCAAGTACTGGGCCATCTTCTCCGAGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLWSFRCSRRFSSLM*RSSSKYWAIFSECC Trigger: ACAACACTCGGAGAAGATGGCCCAGTACTTGGAGGAGGAGCGGCACATGAGGGAAGAGAACCTGCGGCTACAGCGGAAGCTCCAGAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTAGCGAGGCCAGGCGGTaGGTGAGCTCCTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: NNKLSETRNGHASSRFPGSEARR*VSSSRR Trigger: CCGCCTGGAGGAGCTCACCAACCGCCTGGCCTCGCT...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS GCA 90 bp | TCCTGTTCCTGCTCCAGGTGTTGTTCCAGCTCCGCCTTCTCATGCTaGAGCTGCATCAGTTTCCGGGAGAGCTCATTGGTGAGAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCSCSRCCSSSAFSC*SCISFRESSLVRNS Trigger: GGAGTTTCTCACCAATGAGCTCTCCCGGAAACTGATGCAGCTGCAGCATGAGAAGGCGGAGCTGGAACAACACCTGGAGCAGGAACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS CCA 90 bp | GCCCGGAGAGTTGTAGTAGGACATTCCAGCTCTAGTCAACGACGTTaGCGGTGTGAAGCCAACCGTGTGACTTGCATACGAAAGACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARRVVVGHSSSSQRR*RCEANRVTCIRKTG Trigger: CCCGGTCTTTCGTATGCAAGTCACACGGTTGGCTTCACACCGCCAACGTCGTTGACTAGAGCTGGAATGTCCTACTACAACTCTCCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
||
| CDS CCA 90 bp | CGCTCCTCCTCCAAGTACTGGGCCATCTTCTCCGAGTGTTGTAACTaGGCGGCTCGTAGCTGCTTCTTCAGTCGCTCCACTTCGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSSKYWAIFSECCN*AARSCFFSRSTSFF Trigger: AAAGAACGAAGTGGAGCGACTGAAGAAGCAGCTACGAGCCGCCCAGTTACAACACTCGGAGAAGATGGCCCAGTACTTGGAGGAGGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACCCACCCCCGGCCAAACAGAAGGATTTGTGCTGAAGGAATGGCGGATTTCTATCTTGAGCACCTaGTTCTCCTGCTGCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTPTPGQTEGFVLKEWRISILST*FSCCSE Trigger: CTCGCTGCAGCAGGAGAACAAGGTGCTCAAGATAGA...AATCCGCCATTCCTTCAGCACAAATCCTTCTGTTTGGCCGGGGGTGGGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS GCA 90 bp | AACTCCTGTTCCTGCTCCAGGTGTTGTTCCAGCTCCGCCTTCTCATaGTGCAGCTGCATCAGTTTCCGGGAGAGCTCATTGGTGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSCSCSRCCSSSAFS*CSCISFRESSLVRN Trigger: GTTTCTCACCAATGAGCTCTCCCGGAAACTGATGCAGCTGCAGCATGAGAAGGCGGAGCTGGAACAACACCTGGAGCAGGAACAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS GCA 90 bp | TTATCCATCCTCTTCCACAGCCGATTCACCAGCGCCTCCTGCTCTTaGTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCGTCTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSILFHSRFTSASCS*SSVFSRSIFSRLSC Trigger: GCAGCTGAGACGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAGGATGGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS GCA 90 bp | TCCAGCTTATCCATCCTCTTCCACAGCCGATTCACCAGCGCCTCCTaGTCTTGCTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSILFHSRFTSAS*SCSSVFSRSIFSRL Trigger: GAGACGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAGGATGGATAAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGGTCTGCAAAAGGTCTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTCGGCGGCGGAGGCGGTaGGACCGGGCTCTGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRSAKGLNCSAEFLVMFGRRRRR*DRALCV Trigger: AACACACAGAGCCCGGTCCAACCGCCTCCGCCGCCG...ACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 90 bp | ATTCCAGCTCTAGTCAACGACGTTGGCGGTGTGAAGCCAACCGTGTaGCTTGCATACGAAAGACCGGGTGATATAGGTCTGCTTGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: IPALVNDVGGVKPTV*LAYERPGDIGLLEL Trigger: CAGCTCAAGCAGACCTATATCACCCGGTCTTTCGTATGCAAGTCACACGGTTGGCTTCACACCGCCAACGTCGTTGACTAGAGCTGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTCCTCCCGTTTTCCTGGTCAATCTCTACAAGCAGGGGACAGGCTCATGTGTCTCCAGCTCTATCTaGAGCACCTTGTTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: MLPPVFLVNLYKQGTGSCVSSSI*STLFSC Trigger: GCAGGAGAACAAGGTGCTCAAGATAGAGCTGGAGAC...ACATGAGCCTGTCCCCTGCTTGTAGAGATTGACCAGGAAAACGGGAGGAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCATGGTCACGCTGGCTTaGCGCAGGTCGCGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLMVTLA*RRSRFS Trigger: GGAGAACCGCGACCTGCGCAAAGCCAGCGTGACCAT...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | TCTATCCTCAGAATTTCCCTGGAATGGTCATGTACCAAGAGGGTTGGGGAGCTGGTGGGCCGTTTAAACTaGTCAGGGCTGCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SILRISLEWSCTKRVGELVGRLN*SGLLLL Trigger: GAGAAGCAGCAGCCCTGACAAGTTTAAACGGCCCAC...CAGCTCCCCAACCCTCTTGGTACATGACCATTCCAGGGAAATTCTGAGGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 90 bp | CCTTCTCATGCTGCAGCTGCATCAGTTTCCGGGAGAGCTCATTGGTaGGAAACTCCTCTTCCTTCTCGTAATTCACGGCGAGGGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PSHAAAASVSGRAHW*ETPLPSRNSRRGFL Trigger: AAGAAACCCTCGCCGTGAATTACGAGAAGGAAGAGGAGTTTCTCACCAATGAGCTCTCCCGGAAACTGATGCAGCTGCAGCATGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 90 bp | TCTTGCTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCGTCTCAGCTaGTCTAAGGTGAGTTGCTTGGAGATGGTGTCGTTCTCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SCSSVFSRSIFSRLS*SKVSCLEMVSFSSF Trigger: AAAGCTGGAGAACGACACCATCTCCAAGCAACTCACCTTAGAGCAGCTGAGACGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 90 bp | TACTGGGCCATCTTCTCCGAGTGTTGTAACTGGGCGGCTCGTAGCTaGTTCTTCAGTCGCTCCACTTCGTTCTTTAAAAACCTGATATGC | + |
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Preference number: 5 (lower is better) Translates to: YWAIFSECCNWAARS*FFSRSTSFFKNLIC Trigger: GCATATCAGGTTTTTAAAGAACGAAGTGGAGCGACTGAAGAAGCAGCTACGAGCCGCCCAGTTACAACACTCGGAGAAGATGGCCCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | GTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTGAAGGCGTGTAAGGGATaGGGCTGGACACAGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: VHCSCTDGCKPSCGCWELKACKG*GWTQCE Trigger: CTCGCACTGTGTCCAGCCCAATCCCTTACACGCCTT...CAATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR CAA 90 bp | TCAGGACAACACAAAAGAATGGATGGGTTTAGCCGCATTGGCTGTTACAATCTCAAGGCGTGTAAGGGATaGGGCTGGACACAGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: SGQHKRMDGFSRIGCYNLKACKG*GWTQCE Trigger: CTCGCACTGTGTCCAGCCCAATCCCTTACACGCCTT...GAGATTGTAACAGCCAATGCGGCTAAACCCATCCATTCTTTTGTGTTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | CTCCGGTGGTCGCCCCACTCCAAATTATATTTCCTAGTGGGTAATTTCTGTAAGAGCCAACCGTGTGACTaGCATACGAAAGACCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LRWSPHSKLYFLVGNFCKSQPCD*HTKDRV Trigger: CACCCGGTCTTTCGTATGCAAGTCACACGGTTGGCT...CTTACAGAAATTACCCACTAGGAAATATAATTTGGAGTGGGGCGACCACCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR CAA 90 bp | GTTAGGTCTGCAAAAGGTCTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTCAGCGCCTCCTGCTCTaGCTCCAGTGTGTTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VRSAKGLNCSAEFLVMFGQRLLL*LQCVFQ Trigger: CTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTG...ACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 90 bp | CTCGTAGCTGCTTCTTCAGTCGCTCCACTTCGTTCTTTAAAAACCTaGTATGCCTCATCATGTTCTCGGGGGAATCGATCTCCATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LVAASSVAPLRSLKT*YASSCSRGNRSPWR Trigger: TCTCCATGGAGATCGATTCCCCCGAGAACATGATGAGGCATATCAGGTTTTTAAAGAACGAAGTGGAGCGACTGAAGAAGCAGCTACGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAGCCAATGATAAAAGGCACAGCAGCCTGAGCCATCAAAGCCACATTCCGGCGAGGTCTCAATCCTaGTGCAGACATCTCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: SEANDKRHSSLSHQSHIPARSQS*CRHLIK Trigger: TTTAATGAGATGTCTGCACAAGGATTGAGACCTCGC...CGGAATGTGGCTTTGATGGCTCAGGCTGCTGTGCCTTTTATCATTGGCTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | AACAATAAACTTTCTGAAACACGCAACGGCCATGCTTCCTCCCGTTTTCCTGGTTCTAAGGTGAGTTGCTaGGAGATGGTGTCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: NNKLSETRNGHASSRFPGSKVSC*EMVSFS Trigger: GGAGAACGACACCATCTCCAAGCAACTCACCTTAGA...ACCAGGAAAACGGGAGGAAGCATGGCCGTTGCGTGTTTCAGAAAGTTTATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 90 bp | AGCTGCTTCTTCAGTCGCTCCACTTCGTTCTTTAAAAACCTGATATaGCTCATCATGTTCTCGGGGGAATCGATCTCCATGGAGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCFFSRSTSFFKNLI*LIMFSGESISMEMS Trigger: AGACATCTCCATGGAGATCGATTCCCCCGAGAACATGATGAGGCATATCAGGTTTTTAAAGAACGAAGTGGAGCGACTGAAGAAGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS-3UTR CAA 90 bp | CACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGTTGGGAATTGAATGCGAGGTCTCAATCCTaGTGCAGACATCTCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: HCSCTDGCKPSCGCWELNARSQS*CRHLIK Trigger: TTTAATGAGATGTCTGCACAAGGATTGAGACCTCGC...ATTCAATTCCCAACAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135607.2 ENSMUST00000156001.8 |
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| CDS-3UTR CAA 90 bp | GTTAGGTCTGCAAAAGGTCTGAACTGTAGTGCTGAATTCTTGGTTATGTTCGGTAAGGCCTGGATTTTCTaGAATAAAGTGTTACTGATG | + |
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Preference number: 5 (lower is better) Translates to: VRSAKGLNCSAEFLVMFGKAWIF*NKVLLM Trigger: CATCAGTAACACTTTATTCAAGAAAATCCAGGCCTT...ACCGAACATAACCAAGAATTCAGCACTACAGTTCAGACCTTTTGCAGACCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 72 bp | GCCGCCCGAGGTCGCCGAGCAGGACGACTGCATGGCTaGCGGGCCGCCGCCCGCCGCGTCCGTGTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AARGRRAGRLHG*RAAARRVRVAL Trigger: GAGAGCGACACGGACGCGGCGGGCGGCGGCCCGGCAGCCATGCAGTCGTCCTGCTCGGCGACCTCGGGCGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CAA 90 bp | GGAGGTGGTGGCGGCGGCGGAGGCGGTTGGACCGGGCTCTGTGTGTaGGGAGACGGAGGCGGCGTGGGCCGTTTAAACTTGTCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGGGGGGGGWTGLCV*GDGGGVGRLNLSGL Trigger: CAGCCCTGACAAGTTTAAACGGCCCACGCCGCCTCCGTCTCCCAACACACAGAGCCCGGTCCAACCGCCTCCGCCGCCGCCACCACCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | CTGCTGCTTCTCCGTGGCGATGGCCTTGTGATGCCGTaGGAGGCCCCCATGTGCTGCACGTGGAGGCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LLLLRGDGLVMP*EAPMCCTWRPG Trigger: TCCGGGCCTCCACGTGCAGCACATGGGGGCCTCCCACGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 72 bp | TGTCAGGGCTGCTGCTTCTCCGTGGCGATGGCCTTGTaGTGCCGTGGGAGGCCCCCATGTGCTGCACGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CQGCCFSVAMAL*CRGRPPCAARG Trigger: TCCACGTGCAGCACATGGGGGCCTCCCACGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | TGCCCGCTCCGGACAAGAACACTTACTGTGATGCCGTaGGAGGCCCCCATGTGCTGCACGTGGAGGCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: CPLRTRTLTVMP*EAPMCCTWRPG Trigger: TCCGGGCCTCCACGTGCAGCACATGGGGGCCTCCCACGGCATCACAGTAAGTGTTCTTGTCCGGAGCGGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135607.2 |
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| CDS CAA 72 bp | AGCACCTTGTTCTCCTGCTGCAGCGAGGCCAGGCGGTaGGTGAGCTCCTCCAGGCGGAACGGCGAGATGACA | + |
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Preference number: 6 (lower is better) Translates to: STLFSCCSEARR*VSSSRRNGEMT Trigger: TGTCATCTCGCCGTTCCGCCTGGAGGAGCTCACCAACCGCCTGGCCTCGCTGCAGCAGGAGAACAAGGTGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CAA 90 bp | GGGCTCTGTGTGTTGGGAGACGGAGGCGGCGTGGGCCGTTTAAACTaGTCAGGGCTGCTGCTTCTCCGTGGCGATGGCCTTGTGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: GLCVLGDGGGVGRLN*SGLLLLRGDGLVMP Trigger: CGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACAAGTTTAAACGGCCCACGCCGCCTCCGTCTCCCAACACACAGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | TGGCGACACAGCGCTTCCCTCCTCTCCATCTCCCTCTaGAGCTTCCGCTGTAGCCGCAGGTTCTCTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WRHSASLLSISL*SFRCSRRFSSL Trigger: GAGGGAAGAGAACCTGCGGCTACAGCGGAAGCTCCAGAGGGAGATGGAGAGGAGGGAAGCGCTGTGTCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS CCA 72 bp | TCATCCATCTCCAGGCTGGACTCGCTCTCCGAGAGCTaGCGACACAGCGCTTCCCTCCTCTCCATCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSISRLDSLSES*RHSASLLSISL Trigger: GAGGGAGATGGAGAGGAGGGAAGCGCTGTGTCGCCAGCTCTCGGAGAGCGAGTCCAGCCTGGAGATGGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS CCA 72 bp | GGGCCGTTTAAACTTGTCAGGGCTGCTGCTTCTCCGTaGCGATGGCCTTGTGATGCCGTGGGAGGCCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPFKLVRAAASP*RWPCDAVGGPH Trigger: ATGGGGGCCTCCCACGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACAAGTTTAAACGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | GTTAAACGCGTGGGAACACTCCATAGTGTGATGCCGTaGGAGGCCCCCATGTGCTGCACGTGGAGGCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: VKRVGTLHSVMP*EAPMCCTWRPG Trigger: TCCGGGCCTCCACGTGCAGCACATGGGGGCCTCCCACGGCATCACACTATGGAGTGTTCCCACGCGTTTAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156001.8 |
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| CDS CAA 72 bp | GTGTTGGGAGACGGAGGCGGCGTGGGCCGTTTAAACTaGTCAGGGCTGCTGCTTCTCCGTGGCGATGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VLGDGGGVGRLN*SGLLLLRGDGL Trigger: AAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACAAGTTTAAACGGCCCACGCCGCCTCCGTCTCCCAACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 72 bp | AGCTTCCGCTGTAGCCGCAGGTTCTCTTCCCTCATGTaGCGCTCCTCCTCCAAGTACTGGGCCATCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFRCSRRFSSLM*RSSSKYWAIFS Trigger: GGAGAAGATGGCCCAGTACTTGGAGGAGGAGCGGCACATGAGGGAAGAGAACCTGCGGCTACAGCGGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS CCA 72 bp | TTTAAACTTGTCAGGGCTGCTGCTTCTCCGTGGCGATaGCCTTGTGATGCCGTGGGAGGCCCCCATGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FKLVRAAASPWR*PCDAVGGPHVL Trigger: CAGCACATGGGGGCCTCCCACGGCATCACAAGGCCATCGCCACGGAGAAGCAGCAGCCCTGACAAGTTTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | TTCTCTTCCCTCATGTGCCGCTCCTCCTCCAAGTACTaGGCCATCTTCTCCGAGTGTTGTAACTGGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSLMCRSSSKY*AIFSECCNWAA Trigger: AGCCGCCCAGTTACAACACTCGGAGAAGATGGCCCAGTACTTGGAGGAGGAGCGGCACATGAGGGAAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CAA 72 bp | CCTCTTCCACAGCCGATTCACCAGCGCCTCCTGCTCTaGCTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLPQPIHQRLLL*LQCVFQVNLLP Trigger: CGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 72 bp | CTCTTCCACAGCCGATTCACCAGCGCCTCCTGCTCTTaGTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: LFHSRFTSASCS*SSVFSRSIFSR Trigger: ACGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | TCCAAGTACTGGGCCATCTTCTCCGAGTGTTGTAACTaGGCGGCTCGTAGCTGCTTCTTCAGTCGCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SKYWAIFSECCN*AARSCFFSRST Trigger: AGTGGAGCGACTGAAGAAGCAGCTACGAGCCGCCCAGTTACAACACTCGGAGAAGATGGCCCAGTACTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CAA 90 bp | CTTATCCATCCTCTTCCACAGCCGATTCACCAGCGCCTCCTGCTCTaGCTCCAGTGTGTTTTCCAGGTCAATCTTCTCCCGTCTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIHPLPQPIHQRLLL*LQCVFQVNLLPSQL Trigger: CAGCTGAGACGGGAGAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAGGATGGATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS GCA 72 bp | TCCATCCTCTTCCACAGCCGATTCACCAGCGCCTCCTaGTCTTGCTCCAGTGTGTTTTCCAGGTCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SILFHSRFTSAS*SCSSVFSRSIF Trigger: GAAGATTGACCTGGAAAACACACTGGAGCAAGAGCAGGAGGCGCTGGTGAATCGGCTGTGGAAGAGGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 72 bp | CCAGGTCAATCTTCTCCCGTCTCAGCTGCTCTAAGGTaGGTTGCTTGGAGATGGTGTCGTTCTCCAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGQSSPVSAALR*VAWRWCRSPAF Trigger: AAAAGCTGGAGAACGACACCATCTCCAAGCAACTCACCTTAGAGCAGCTGAGACGGGAGAAGATTGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CCA 72 bp | GTTGTAGTAGGACATTCCAGCTCTAGTCAACGACGTTaGCGGTGTGAAGCCAACCGTGTGACTTGCATACGA | + |
|
Preference number: 6 (lower is better) Translates to: VVVGHSSSSQRR*RCEANRVTCIR Trigger: TCGTATGCAAGTCACACGGTTGGCTTCACACCGCCAACGTCGTTGACTAGAGCTGGAATGTCCTACTACAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135607.2 ENSMUST00000147545.8 ENSMUST00000156001.8 |
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| CDS GCA 72 bp | ATCTTCTCCGAGTGTTGTAACTGGGCGGCTCGTAGCTaGTTCTTCAGTCGCTCCACTTCGTTCTTTAAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IFSECCNWAARS*FFSRSTSFFKN Trigger: GTTTTTAAAGAACGAAGTGGAGCGACTGAAGAAGCAGCTACGAGCCGCCCAGTTACAACACTCGGAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS CAA 72 bp | ATCTTCTCCCGTCTCAGCTGCTCTAAGGTGAGTTGCTaGGAGATGGTGTCGTTCTCCAGCTTTTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFSRLSCSKVSC*EMVSFSSFLIF Trigger: GAAGATCAAAAAGCTGGAGAACGACACCATCTCCAAGCAACTCACCTTAGAGCAGCTGAGACGGGAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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| CDS TCA 72 bp | GCTTCTTCAGTCGCTCCACTTCGTTCTTTAAAAACCTaGTATGCCTCATCATGTTCTCGGGGGAATCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSVAPLRSLKT*YASSCSRGNRS Trigger: AGATCGATTCCCCCGAGAACATGATGAGGCATATCAGGTTTTTAAAGAACGAAGTGGAGCGACTGAAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147545.8 |
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