Pregenerated sensors for CCDC51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025645Ensembl transcript IDs: ENSMUST00000026735.9
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATATCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTaGGGTTGTGTGTACCTCAAGATTCATTATATCACCAACAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: YISDGEPLRWHSESG*GCVYLKIHYITNKS Trigger: GCTTTTGTTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | TCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTTCCTGTGCTCCAAAGTaGCCAGCTCCAGGTACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SQMVSPSDGIQSQAEVVCSCAPK*PAPGTG Trigger: ACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGA...ACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | TCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTGTGTTCCTGTTAGCCTaGGCTTCTAGCCTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SQMVSPSDGIQSQAEVVCVFLLA*ASSLCS Trigger: GGAGCAGAGGCTAGAAGCCCAGGCTAACAGGAACAC...ACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | TCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTAGAGCAGAGGCAATGTaGCCAGGAAGGTCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: SQMVSPSDGIQSQAEVVCRAEAM*PGRSHR Trigger: CCTGTGTGACCTTCCTGGCCACATTGCCTCTGCTCT...ACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | GGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAGTTCCAGCAAGGAGCTaGGCAGGGCCCCATCCACCG | + |
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Preference number: 4 (lower is better) Translates to: GIQSQAEVVCTSRFIISPVPARS*AGPHPP Trigger: CGGTGGATGGGGCCCTGCCCAGCTCCTTGCTGGAAC...TGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | TCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTGGAGCTGCTCTTTCATaGTGGCTGAAAGGCCATCTA | + |
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Preference number: 4 (lower is better) Translates to: SQMVSPSDGIQSQAEVVCGAALS*WLKGHL Trigger: TAGATGGCCTTTCAGCCACCATGAAAGAGCAGCTCC...ACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR TCA 90 bp | TCTCAGATGGTGAGCCCCTCAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTCCTCCCGAACTTCATTaGGTCCCACAAACTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SQMVSPSDGIQSQAEVVCPPELH*VPQTLH Trigger: ATGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGG...ACACACAACCTCAGCCTGACTCTGAATGCCATCTGAGGGGCTCACCATCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR GCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCACGTGCTGCATTaGGAACACGGGGCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYHHVLH*EHGAAP Trigger: GGGTGCAGCCCCGTGTTCGCAATGCAGCACGTGGTG...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR TCA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAAGCCCACGAGCCACCATaGACACTTTCTCCGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQAHEPP*TLSPPL Trigger: CAGAGGCGGAGAAAGTGTTCATGGTGGCTCGTGGGC...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | GGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAGCCAGCTCCAGGTACTaGTTGTCCTCCCTGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: GIQSQAEVVCTSRFIISPASSRY*LSSLET Trigger: AGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGC...TGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAACGTGCCTGGATGTGCTaGAGCCTGTGCCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQRAWMC*SLCQLK Trigger: CTTCAGCTGGCACAGGCTCCAGCACATCCAGGCACG...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR GCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATTGGGCTTCTAGCCTCTaGTCCATCTCTGACAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYWASSL*SISDRA Trigger: GGCCCTGTCAGAGATGGAGCAGAGGCTAGAAGCCCA...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATACTGGTTGTCCTCCCTaGAGACTCGGTCCAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYTGCPP*RLGPSG Trigger: ACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGT...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR GCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCTCTGGGACCTGGACTaGACAGAGTCCTTGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYLWDLD*TESLSW Trigger: CCATGACAAGGACTCTGTGCAGTCCAGGTCCCAGAG...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR GCA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAATCCTGTAGCATCCTGTaGTCCAAAGTGGCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQSCSIL*SKVASS Trigger: GGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGA...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | GGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCACTTCTCTCTGGGACCTaGACTGCACAGAGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GIQSQAEVVCTSRFIISPLLSGT*TAQSPC Trigger: ACAAGGACTCTGTGCAGTCCAGGTCCCAGAGAGAAG...TGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR TCA 90 bp | ATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACTTCAGCTTAGTCTGCTaGGCTTCCAAACCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: MAFRVRLRLCVPQDSLYHFSLVC*ASKPSR Trigger: TCGGGAGGGTTTGGAAGCTCAGCAGACTAAGCTGAA...GTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR TCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATGAACTTCTCTCGCTCTaGGTCTTCTGCACGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYELLSL*VFCTQV Trigger: TACCTGCGTGCAGAAGACTCAGAGCGAGAGAAGTTC...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR GCA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAATCCAGGCCATCAAGCTaGTCTCGTAAACCCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQSRPSS*SRKPSR Trigger: CCTAGAGGGTTTACGAGAGCAGCTTGATGGCCTGGA...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATTCCATCATAAGGTCCTaGAGGTCTTTCTGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYSIIRS*RSFCWR Trigger: CCTCCAACAGAAAGACCTCCAGGACCTTATGATGGA...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CCA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAAGCTGCTCTTTCATGGTaGCTGAAAGGCCATCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQAALSW*LKGHLC Trigger: ACATAGATGGCCTTTCAGCCACCATGAAAGAGCAGC...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR TCA 90 bp | ATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCTCTTTCATGGTGGCTaGAAGGCCATCTATGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: MAFRVRLRLCVPQDSLYHLFHGG*KAIYVF Trigger: AAAGACATAGATGGCCTTTCAGCCACCATGAAAGAG...GTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 90 bp | TCTCTGACAGGGCCAAGATCACACTCCCGTGTTCCAGCAAGGAGCTaGGCAGGGCCCCATCCACCGGCCCCACCGTGCCTGGATGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLTGPRSHSRVPARS*AGPHPPAPPCLDVL Trigger: CAGCACATCCAGGCACGGTGGGGCCGGTGGATGGGGCCCTGCCCAGCTCCTTGCTGGAACACGGGAGTGTGATCTTGGCCCTGTCAGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 90 bp | GTAGAAGAACCTGTTGGTGACCCGGAGCCCTGGCCCTGCTCGGCGTaGACCAGGCCCCTCAGATCCATCATAAGGTCCTGGAGGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VEEPVGDPEPWPCSA*TRPLRSIIRSWRSF Trigger: GAAAGACCTCCAGGACCTTATGATGGATCTGAGGGGCCTGGTGCACGCCGAGCAGGGCCAGGGCTCCGGGTCACCAACAGGTTCTTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 90 bp | TTTCCTCTGGTAGAAGAACCTGTTGGTGACCCGGAGCCCTGGCCCTaGTCGGCGTGCACCAGGCCCCTCAGATCCATCATAAGGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPLVEEPVGDPEPWP*SACTRPLRSIIRSW Trigger: CCAGGACCTTATGATGGATCTGAGGGGCCTGGTGCACGCCGAGCAGGGCCAGGGCTCCGGGTCACCAACAGGTTCTTCTACCAGAGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS TCA 90 bp | GAGACTCGGTCCAAGCGGTCCCTCACCTCCTTCAGCTTAGTCTGCTaGGCTTCCAAACCCTCCCGAGCTTCTCGAACAAGCCCACGAGCC | + |
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Preference number: 5 (lower is better) Translates to: ETRSKRSLTSFSLVC*ASKPSRASRTSPRA Trigger: GGCTCGTGGGCTTGTTCGAGAAGCTCGGGAGGGTTTGGAAGCTCAGCAGACTAAGCTGAAGGAGGTGAGGGACCGCTTGGACCGAGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 90 bp | TCTTCCTGTAGCATCCTGTGCTCCAAAGTGGCCAGCTCCAGGTACTaGTTGTCCTCCCTGGAGACTCGGTCCAAGCGGTCCCTCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSCSILCSKVASSRY*LSSLETRSKRSLTS Trigger: GGAGGTGAGGGACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 90 bp | ATGTCTTTTCCTCTGGTAGAAGAACCTGTTGGTGACCCGGAGCCCTaGCCCTGCTCGGCGTGCACCAGGCCCCTCAGATCCATCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: MSFPLVEEPVGDPEP*PCSACTRPLRSIIR Trigger: CCTTATGATGGATCTGAGGGGCCTGGTGCACGCCGAGCAGGGCCAGGGCTCCGGGTCACCAACAGGTTCTTCTACCAGAGGAAAAGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 90 bp | CTATTCGGAGCCTCTTCTCTTCCTGTAGCATCCTGTGCTCCAAAGTaGCCAGCTCCAGGTACTGGTTGTCCTCCCTGGAGACTCGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LFGASSLPVASCAPK*PAPGTGCPPWRLGP Trigger: TGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGAAGAGAAGAGGCTCCGAATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 90 bp | AGTGTGCTAGAGACAGTGTTCCTGTTAGCCTGGGCTTCTAGCCTCTaGTCCATCTCTGACAGGGCCAAGATCACACTCCCGTGTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SVLETVFLLAWASSL*SISDRAKITLPCSS Trigger: GCTGGAACACGGGAGTGTGATCTTGGCCCTGTCAGAGATGGAGCAGAGGCTAGAAGCCCAGGCTAACAGGAACACTGTCTCTAGCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS TCA 90 bp | AACTCTTCATATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTGCTTaGTGGCGAACGGTGTGGCTCAGTGTTCTTCCCAATTCCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NSSYLSHQALAVEAA*WRTVWLSVLPNSGR Trigger: CCTCCCGGAATTGGGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATATGAAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS TCA 90 bp | CTTTCTCCGCCTCTGTCACGTTTCCCTGGGCCTCCCGAACTTCATTaGGTCCCACAAACTCTTCATATCTGTCCCACCAAGCCTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSPPLSRFPGPPELH*VPQTLHICPTKPWQ Trigger: CTGCCAAGGCTTGGTGGGACAGATATGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGGCCCAGGGAAACGTGACAGAGGCGGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 90 bp | GATGTGCTGGAGCCTGTGCCAGCTGAAGCACCCCAGCCATTTGACTaGAAGTCTTTTCCAGGCCATCAAGCTGCTCTCGTAAACCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: DVLEPVPAEAPQPFD*KSFPGHQAALVNPL Trigger: TAGAGGGTTTACGAGAGCAGCTTGATGGCCTGGAAAAGACTTGCAGTCAAATGGCTGGGGTGCTTCAGCTGGCACAGGCTCCAGCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 90 bp | CACAAACTCTTCATATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTaGTTGATGGCGAACGGTGTGGCTCAGTGTTCTTCCCAATTCCGG | + |
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Preference number: 5 (lower is better) Translates to: HKLFISVPPSLGSRG*LMANGVAQCSSQFR Trigger: CCGGAATTGGGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATATGAAGAGTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 90 bp | CATCAAGCTGCTCTCGTAAACCCTCTAGGCAGGAATAGACCTGCCTaGAATGACGGAGCTGCTCTTTCATGGTGGCTGAAAGGCCATCTA | + |
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Preference number: 5 (lower is better) Translates to: HQAALVNPLGRNRPA*NDGAALSWWLKGHL Trigger: TAGATGGCCTTTCAGCCACCATGAAAGAGCAGCTCCGTCATTCCAGGCAGGTCTATTCCTGCCTAGAGGGTTTACGAGAGCAGCTTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CAA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATGGCAGTAGAGGCTGCTaGATGGCGAACGGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYGSRGC*MANGVA Trigger: AGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCC...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CAA 90 bp | GCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACCAAAGCTCCAGGTACTGGTaGTCCTCCCTGGAGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: AFRVRLRLCVPQDSLYHQSSRYW*SSLETR Trigger: CCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCT...TTGGTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CAA 90 bp | ATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACTGGTCCTCTCAGCCCTaGTACGCTCTTTCTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: MAFRVRLRLCVPQDSLYHWSSQP*YALSHD Trigger: GTCATGAGAAAGAGCGTACAAGGGCTGAGAGGACCA...GTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CAA 90 bp | ATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATCACGCCTCCCGAACTTCATaGAGTCCCACAAACTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MAFRVRLRLCVPQDSLYHASRTS*SPTNSS Trigger: TGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGGC...GTGATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS-3UTR CAA 90 bp | CAGATGGCATTCAGAGTCAGGCTGAGGTTGTGTGTACCTCAAGATTCATTATATATAAGGGACCAGTTCTaGGTCCTCTCAGCCCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: QMAFRVRLRLCVPQDSLYIRDQF*VLSALV Trigger: TACAAGGGCTGAGAGGACCAAGAACTGGTCCCTTAT...ATATAATGAATCTTGAGGTACACACAACCTCAGCCTGACTCTGAATGCCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | GCTGGGCAGGGCCCCATCCACCGGCCCCACCGTGCCTaGATGTGCTGGAGCCTGTGCCAGCTGAAGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: AGQGPIHRPHRA*MCWSLCQLKHP Trigger: GGGGTGCTTCAGCTGGCACAGGCTCCAGCACATCCAGGCACGGTGGGGCCGGTGGATGGGGCCCTGCCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | AGGAGCTGGGCAGGGCCCCATCCACCGGCCCCACCGTaGCTGGATGTGCTGGAGCCTGTGCCAGCTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSWAGPHPPAPP*LDVLEPVPAEA Trigger: TGCTTCAGCTGGCACAGGCTCCAGCACATCCAGGCACGGTGGGGCCGGTGGATGGGGCCCTGCCCAGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | GGGCCAAGATCACACTCCCGTGTTCCAGCAAGGAGCTaGGCAGGGCCCCATCCACCGGCCCCACCGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPRSHSRVPARS*AGPHPPAPPCL Trigger: CAGGCACGGTGGGGCCGGTGGATGGGGCCCTGCCCAGCTCCTTGCTGGAACACGGGAGTGTGATCTTGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | CCTGTTGGTGACCCGGAGCCCTGGCCCTGCTCGGCGTaGACCAGGCCCCTCAGATCCATCATAAGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PVGDPEPWPCSA*TRPLRSIIRSW Trigger: CCAGGACCTTATGATGGATCTGAGGGGCCTGGTGCACGCCGAGCAGGGCCAGGGCTCCGGGTCACCAACAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | GTAGAAGAACCTGTTGGTGACCCGGAGCCCTGGCCCTaGTCGGCGTGCACCAGGCCCCTCAGATCCATCATA | + |
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Preference number: 6 (lower is better) Translates to: VEEPVGDPEPWP*SACTRPLRSII Trigger: TATGATGGATCTGAGGGGCCTGGTGCACGCCGAGCAGGGCCAGGGCTCCGGGTCACCAACAGGTTCTTCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | CCAAAGTGGCCAGCTCCAGGTACTGGTTGTCCTCCCTaGAGACTCGGTCCAAGCGGTCCCTCACCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PKWPAPGTGCPP*RLGPSGPSPPS Trigger: TGAAGGAGGTGAGGGACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | AGCATCCTGTGCTCCAAAGTGGCCAGCTCCAGGTACTaGTTGTCCTCCCTGGAGACTCGGTCCAAGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SILCSKVASSRY*LSSLETRSKRS Trigger: GGACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 72 bp | ATCCTGTGCTCCAAAGTGGCCAGCTCCAGGTACTGGTaGTCCTCCCTGGAGACTCGGTCCAAGCGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ILCSKVASSRYW*SSLETRSKRSL Trigger: GAGGGACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 90 bp | TCCTGTAGCATCCTGTGCTCCAAAGTGGCCAGCTCCAGGTACTGGTaGTCCTCCCTGGAGACTCGGTCCAAGCGGTCCCTCACCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SCSILCSKVASSRYW*SSLETRSKRSLTSF Trigger: GAAGGAGGTGAGGGACCGCTTGGACCGAGTCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | GAGACAGTGTTCCTGTTAGCCTGGGCTTCTAGCCTCTaGTCCATCTCTGACAGGGCCAAGATCACACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ETVFLLAWASSL*SISDRAKITLP Trigger: CGGGAGTGTGATCTTGGCCCTGTCAGAGATGGAGCAGAGGCTAGAAGCCCAGGCTAACAGGAACACTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | GCCTCTTCTCTTCCTGTAGCATCCTGTGCTCCAAAGTaGCCAGCTCCAGGTACTGGTTGTCCTCCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ASSLPVASCAPK*PAPGTGCPPWR Trigger: TCTCCAGGGAGGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGAAGAGAAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 72 bp | TGCTGGAGCCTGTGCCAGCTGAAGCACCCCAGCCATTaGACTGCAAGTCTTTTCCAGGCCATCAAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CWSLCQLKHPSH*TASLFQAIKLL Trigger: GAGCAGCTTGATGGCCTGGAAAAGACTTGCAGTCAAATGGCTGGGGTGCTTCAGCTGGCACAGGCTCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 90 bp | CACCAGGCCCCTCAGATCCATCATAAGGTCCTGGAGGTCTTTCTGTaGGAGGGAATAGCTAGAAGCCTGTTCACGGATGGCCTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HQAPQIHHKVLEVFL*EGIARSLFTDGLLE Trigger: CTCCAGGAGGCCATCCGTGAACAGGCTTCTAGCTATTCCCTCCAACAGAAAGACCTCCAGGACCTTATGATGGATCTGAGGGGCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | GCTATTCGGAGCCTCTTCTCTTCCTGTAGCATCCTGTaGTCCAAAGTGGCCAGCTCCAGGTACTGGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AIRSLFSSCSIL*SKVASSRYWLS Trigger: GGACAACCAGTACCTGGAGCTGGCCACTTTGGAGCACAGGATGCTACAGGAAGAGAAGAGGCTCCGAATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | GAGCCTGTGCCAGCTGAAGCACCCCAGCCATTTGACTaGAAGTCTTTTCCAGGCCATCAAGCTGCTCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: EPVPAEAPQPFD*KSFPGHQAALV Trigger: TACGAGAGCAGCTTGATGGCCTGGAAAAGACTTGCAGTCAAATGGCTGGGGTGCTTCAGCTGGCACAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS TCA 72 bp | TATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTGCTTaGTGGCGAACGGTGTGGCTCAGTGTTCTTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: YLSHQALAVEAA*WRTVWLSVLPN Trigger: ATTGGGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS GCA 72 bp | TTCATATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTaGTTGATGGCGAACGGTGTGGCTCAGTGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FISVPPSLGSRG*LMANGVAQCSS Trigger: GGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 72 bp | ATATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTGCTaGATGGCGAACGGTGTGGCTCAGTGTTCTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: ISVPPSLGSRGC*MANGVAQCSSQ Trigger: TTGGGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 90 bp | AAACTCTTCATATCTGTCCCACCAAGCCTTGGCAGTAGAGGCTGCTaGATGGCGAACGGTGTGGCTCAGTGTTCTTCCCAATTCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLFISVPPSLGSRGC*MANGVAQCSSQFRE Trigger: CTCCCGGAATTGGGAAGAACACTGAGCCACACCGTTCGCCATCAAGCAGCCTCTACTGCCAAGGCTTGGTGGGACAGATATGAAGAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 90 bp | ACTTTCTCCGCCTCTGTCACGTTTCCCTGGGCCTCCCGAACTTCATaGAGTCCCACAAACTCTTCATATCTGTCCCACCAAGCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TFSASVTFPWASRTS*SPTNSSYLSHQALA Trigger: TGCCAAGGCTTGGTGGGACAGATATGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGGCCCAGGGAAACGTGACAGAGGCGGAGAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS TCA 72 bp | CCTCTGTCACGTTTCCCTGGGCCTCCCGAACTTCATTaGGTCCCACAAACTCTTCATATCTGTCCCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: PLSRFPGPPELH*VPQTLHICPTK Trigger: CTTGGTGGGACAGATATGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGGCCCAGGGAAACGTGACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | ACCATGAACACTTTCTCCGCCTCTGTCACGTTTCCCTaGGCCTCCCGAACTTCATTGAGTCCCACAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: TMNTFSASVTFP*ASRTSLSPTNS Trigger: AGAGTTTGTGGGACTCAATGAAGTTCGGGAGGCCCAGGGAAACGTGACAGAGGCGGAGAAAGTGTTCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CCA 72 bp | GCTCTCGTAAACCCTCTAGGCAGGAATAGACCTGCCTaGAATGACGGAGCTGCTCTTTCATGGTGGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ALVNPLGRNRPA*NDGAALSWWLK Trigger: TTTCAGCCACCATGAAAGAGCAGCTCCGTCATTCCAGGCAGGTCTATTCCTGCCTAGAGGGTTTACGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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| CDS CAA 72 bp | GCCTCTGTCACGTTTCCCTGGGCCTCCCGAACTTCATaGAGTCCCACAAACTCTTCATATCTGTCCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: ASVTFPWASRTS*SPTNSSYLSHQ Trigger: TTGGTGGGACAGATATGAAGAGTTTGTGGGACTCAATGAAGTTCGGGAGGCCCAGGGAAACGTGACAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026735.9 |
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