Pregenerated sensors for CCDC50 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038127

Ensembl transcript IDs: ENSMUST00000039443.14, ENSMUST00000096127.11, ENSMUST00000100026.10, ENSMUST00000143823.2, ENSMUST00000239351.2

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CGGGGCTTTCCCTTTGCCTCCTTCGCAGAAGGAGGATCTCCTGCATaGATCTGCTGGCTGACACGCAGGCCTGCAGTTCACTCCCTTGCA	+
Preference number: 1 (lower is better) Translates to: RGFPFASFAEGGSPA*ICWLTRRPAVHSLA Trigger: TGCAAGGGAGTGAACTGCAGGCCTGCGTGTCAGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGGAAAGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	GCATGCAGCGTGGACAGGGTACTCCACAGGAGGCTTCTGTCTGCCTaGACTGCCTTGTTACAGGGTGGGAAGAAGGAAGCATCAGTCACC	+
Preference number: 1 (lower is better) Translates to: ACSVDRVLHRRLLSA*TALLQGGKKEASVT Trigger: GGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCACGCTGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	CAGCGTGGACAGGGTACTCCACAGGAGGCTTCTGTCTGCCTGCACTaGCTTGTTACAGGGTGGGAAGAAGGAAGCATCAGTCACCAGTCA	+
Preference number: 1 (lower is better) Translates to: QRGQGTPQEASVCLH*LVTGWEEGSISHQS Trigger: TGACTGGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCACGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	AGGAAAGCACTGTGTAGACTCTGGCTTAAGGCGGGGCTTTCCCTTTaGCTCCTTCGCAGAAGGAGGATCTCCTGCATGGATCTGCTGGCT	+
Preference number: 1 (lower is better) Translates to: RKALCRLWLKAGLSL*LLRRRRISCMDLLA Trigger: AGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGGAAAGCCCCGCCTTAAGCCAGAGTCTACACAGTGCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	TGTTGCATGCAGCGTGGACAGGGTACTCCACAGGAGGCTTCTGTCTaGCTGCACTGCCTTGTTACAGGGTGGGAAGAAGGAAGCATCAGT	+
Preference number: 1 (lower is better) Translates to: CCMQRGQGTPQEASV*LHCLVTGWEEGSIS Trigger: ACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCACGCTGCATGCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	TCCTTTCCCACTGAGGTCAGACAAGGAGGTCCTCTGCTACATATGTaGCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTT	+
Preference number: 1 (lower is better) Translates to: SFPTEVRQGGPLLHM*HRPAHPCMLFGWWL Trigger: AAGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGGACCTCCTTGTCTGACCTCAGTGGGAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 90 bp	TGCAAGGTTGCCAACAAAAACTGCTATATCCTGGGAGCAGGAGGCTaGATGTGCACAGCTAGTTGGGCGGATGGTACCAAGTCCTATGGA	+
Preference number: 1 (lower is better) Translates to: CKVANKNCYILGAGG*MCTASWADGTKSYG Trigger: TCCATAGGACTTGGTACCATCCGCCCAACTAGCTGTGCACATCCAGCCTCCTGCTCCCAGGATATAGCAGTTTTTGTTGGCAACCTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	TTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAAAGCTCTGGGTaGTGCTGCTGCTTGAAGCTCTGTTATGAACTGCATGCTAATGGA	+
Preference number: 1 (lower is better) Translates to: LQVTQSTVGEVQSSG*CCCLKLCYELHANG Trigger: TCCATTAGCATGCAGTTCATAACAGAGCTTCAAGCAGCAGCAGCACCCAGAGCTTTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	CTCCAGCCAGGGAACTGTCTCACAGCAGTGCTCTGGCCATGCCGCTaGTATCAGGGAACTGAGAAGATATTCCTATTAATGTTACAAGTC	+
Preference number: 1 (lower is better) Translates to: LQPGNCLTAVLWPCR*YQGTEKIFLLMLQV Trigger: GACTTGTAACATTAATAGGAATATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCTGTGAGACAGTTCCCTGGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	GGAGTTCACAGTGAAATCAAAGGGAACAATGTCTCCTTGTCAGTGTaGCTTCAATGTCAGCGCTCCTTCCACAAACACCACCCTCCCCAA	+
Preference number: 1 (lower is better) Translates to: GVHSEIKGNNVSLSV*LQCQRSFHKHHPPQ Trigger: TTGGGGAGGGTGGTGTTTGTGGAAGGAGCGCTGACATTGAAGTCACACTGACAAGGAGACATTGTTCCCTTTGATTTCACTGTGAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	CTGTCTCACAGCAGTGCTCTGGCCATGCCGCTGCTATCAGGGAACTaGGAAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGT	+
Preference number: 1 (lower is better) Translates to: LSHSSALAMPLLSGN*EDIPINVTSHPEHS Trigger: ACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCTGTGAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	AAGACAGCAGTCCCTCAACACGTGACTGTAAGTCAGGAAGAACACTaGGCACAGTCAGCTACTTGCTACACTGAGACTGAATCTGCAACA	+
Preference number: 1 (lower is better) Translates to: KTAVPQHVTVSQEEH*AQSATCYTETESAT Trigger: TGTTGCAGATTCAGTCTCAGTGTAGCAAGTAGCTGACTGTGCTCAGTGTTCTTCCTGACTTACAGTCACGTGTTGAGGGACTGCTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR GCA 90 bp	GTATTAAAGCATCCAGTGGACCACAGGTCACATACTTTAGACTGCTaGCTAGGTGTAGTGACCCAGGCCACTGTGAAGAGTTTTCTTTGG	+
Preference number: 1 (lower is better) Translates to: VLKHPVDHRSHTLDC*LGVVTQATVKSFLW Trigger: CCAAAGAAAACTCTTCACAGTGGCCTGGGTCACTACACCTAGGCAGCAGTCTAAAGTATGTGACCTGTGGTCCACTGGATGCTTTAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 90 bp	CATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTaGCTTTGTCTCTGGGACCTAGGTGTAATTAATGTTTCTATGTGT	+
Preference number: 1 (lower is better) Translates to: HMCHRPAHPCMLFGW*LCLWDLGVINVSMC Trigger: ACACATAGAAACATTAATTACACCTAGGTCCCAGAGACAAAGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 90 bp	TGTTGGGAGCAGCCTTCCAGAACCCTCCACAAGTTTAAGACAGTTTaGAAAGACAAGGCAAATGGAAGGCAGGCAGTCCTTAAATTATTT	+
Preference number: 1 (lower is better) Translates to: CWEQPSRTLHKFKTV*KDKANGRQAVLKLF Trigger: AAATAATTTAAGGACTGCCTGCCTTCCATTTGCCTTGTCTTTCCAAACTGTCTTAAACTTGTGGAGGGTTCTGGAAGGCTGCTCCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	CTCCTGGGTCACTTCTCTGATTGTGAGATAGGAAGAGAGAATGAGTaGCCGAGTCATAAACAGCATATGACAGACACATTACAGACTTCT	+
Preference number: 1 (lower is better) Translates to: LLGHFSDCEIGRENE*PSHKQHMTDTLQTS Trigger: AGAAGTCTGTAATGTGTCTGTCATATGCTGTTTATGACTCGGTCACTCATTCTCTCTTCCTATCTCACAATCAGAGAAGTGACCCAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	TGTGAAATCAGTGTAGCAATATATCCAAAGACTGCCACCCATTACTaGATAGCCTCTCAATGCCTACTCTTTACTGTAGGCAATTCTTGC	+
Preference number: 1 (lower is better) Translates to: CEISVAIYPKTATHY*IASQCLLFTVGNSC Trigger: GCAAGAATTGCCTACAGTAAAGAGTAGGCATTGAGAGGCTATGCAGTAATGGGTGGCAGTCTTTGGATATATTGCTACACTGATTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 90 bp	TTCAATGTTGTAGGGACTGTTTTGTACAAGTGTCCTATGAGAACATaGCACGGAGTTCACAGTGAAATCAAAGGGAACAATGTCTCCTTG	+
Preference number: 1 (lower is better) Translates to: FNVVGTVLYKCPMRT*HGVHSEIKGNNVSL Trigger: CAAGGAGACATTGTTCCCTTTGATTTCACTGTGAACTCCGTGCCATGTTCTCATAGGACACTTGTACAAAACAGTCCCTACAACATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	TGTTTTCCAAGCTCTCTACCTTCTTGGAGACGCTACGATGAAATTTaGGCATTTCTGATGAGTTATAGCAGACGCAACAAAGCCTTTAAC	+
Preference number: 1 (lower is better) Translates to: CFPSSLPSWRRYDEI*AFLMSYSRRNKAFN Trigger: GTTAAAGGCTTTGTTGCGTCTGCTATAACTCATCAGAAATGCTCAAATTTCATCGTAGCGTCTCCAAGAAGGTAGAGAGCTTGGAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	GCAACTCCCAGAATGGCACACAGAAGGACAACAGCCAACGTGGAATaGATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATATG	+
Preference number: 1 (lower is better) Translates to: ATPRMAHRRTTANVE*MLYLSVICAIRSNM Trigger: CATATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGCTGTTGTCCTTCTGTGTGCCATTCTGGGAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	AGAAAAGCAAGGCAATGGAAGGCTGTTTGTTCTTTAATTTTGAGTTaGCGCCTCATGGACCTGAGAGAAAGTATCAGACAATTAAAGTCT	+
Preference number: 1 (lower is better) Translates to: RKARQWKAVCSLILS*RLMDLRESIRQLKS Trigger: AGACTTTAATTGTCTGATACTTTCTCTCAGGTCCATGAGGCGTCAACTCAAAATTAAAGAACAAACAGCCTTCCATTGCCTTGCTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 90 bp	AATAAACAGCATACTGACATGACAGAAAATGTCAGACCCACACATTaGAAAGAACAGGAAGTCAAGCTGGGAAAATGGCAATCATATATA	+
Preference number: 1 (lower is better) Translates to: NKQHTDMTENVRPTH*KEQEVKLGKWQSYI Trigger: TATATATGATTGCCATTTTCCCAGCTTGACTTCCTGTTCTTTTCAATGTGTGGGTCTGACATTTTCTGTCATGTCAGTATGCTGTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 90 bp	TGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATATGTaGTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTA	+
Preference number: 1 (lower is better) Translates to: CMLYLSVICAIRSNM*YTKSIFEADPFLFV Trigger: TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
3UTR-3UTR TCA 90 bp	AAGAGTTCTTCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTGCTCCCCCAGTCAGGAAGAACACTaGGCACAGTCAGCTACTTGC	+
Preference number: 2 (lower is better) Translates to: KSSSSYLASPLPLRGCSPSQEEH*AQSATC Trigger: GCAAGTAGCTGACTGTGCTCAGTGTTCTTCCTGACT...GGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGAAGAACTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CAA 90 bp	GTGGACAGGGTACTCCACAGGAGGCTTCTGTCTGCCTGCACTGCCTaGTTACAGGGTGGGAAGAAGGAAGCATCAGTCACCAGTCAGATA	+
Preference number: 2 (lower is better) Translates to: VDRVLHRRLLSACTA*LQGGKKEASVTSQI Trigger: TATCTGACTGGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR GCA 90 bp	TGTCAGCGCTCCTTCCACAAACACCACCCTCCCCAAATGGAAGTAGCCATTTACGCAGGAGGCTGGATGTaGACAGCTAGTTGGGCGGAT	+
Preference number: 2 (lower is better) Translates to: CQRSFHKHHPPQMEVAIYAGGWM*TASWAD Trigger: ATCCGCCCAACTAGCTGTGCACATCCAGCCTCCTGC...GTAAATGGCTACTTCCATTTGGGGAGGGTGGTGTTTGTGGAAGGAGCGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR CCA 90 bp	AAGAGTTCTTCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTGCTCCCCCATGCTCTTTGGTTGGTaGCTTTGTCTCTGGGACCTA	+
Preference number: 2 (lower is better) Translates to: KSSSSYLASPLPLRGCSPMLFGW*LCLWDL Trigger: TAGGTCCCAGAGACAAAGCCACCAACCAAAGAGCAT...GGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGAAGAACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CAA 90 bp	CAGAGCACAGTGGGCGAGGTTCAAAGCTCTGGGTGCTGCTGCTGCTaGAAGCTCTGTTATGAACTGCATGCTAATGGAGAGCTGACAAGT	+
Preference number: 2 (lower is better) Translates to: QSTVGEVQSSGCCCC*KLCYELHANGELTS Trigger: ACTTGTCAGCTCTCCATTAGCATGCAGTTCATAACAGAGCTTCAAGCAGCAGCAGCACCCAGAGCTTTGAACCTCGCCCACTGTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR TCA 90 bp	GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTGACTCTCCTGGGTCACTTCTCTAACAGCATACTGACATaGCAGAAAATGTCAGACCCA	+
Preference number: 2 (lower is better) Translates to: EREREREREELTLLGHFSNSILT*QKMSDP Trigger: TGGGTCTGACATTTTCTGTCATGTCAGTATGCTGTT...AGAGAAGTGACCCAGGAGAGTCAGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR GCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGGCACAGTCAGCTACTTaGTACACTGAGACTGAATCT	+
Preference number: 2 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWAQSAT*YTETES Trigger: AGATTCAGTCTCAGTGTAGCAAGTAGCTGACTGTGC...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR GCA 90 bp	GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCTGACTCTCCTGGGTCACTTCTCTTGCATAAAACATCACTaGAAGGTTGCCAACAAAAAC	+
Preference number: 2 (lower is better) Translates to: EREREREREELTLLGHFSCIKHH*KVANKN Trigger: GTTTTTGTTGGCAACCTTGCAGTGATGTTTTATGCA...AGAGAAGTGACCCAGGAGAGTCAGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR TCA 90 bp	TGTCAGCGCTCCTTCCACAAACACCACCCTCCCCAAATGGAAGTAGCCATTTACTCGGGTGTCATTTTATaGAACAAAAGACTGTTCTCA	+
Preference number: 2 (lower is better) Translates to: CQRSFHKHHPPQMEVAIYSGVIL*NKRLFS Trigger: TGAGAACAGTCTTTTGTTTCATAAAATGACACCCGA...GTAAATGGCTACTTCCATTTGGGGAGGGTGGTGTTTGTGGAAGGAGCGCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR TCA 90 bp	AAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAACTCCACAGACATTGCTaGCATAAAGTGCAGGGCTCA	+
Preference number: 2 (lower is better) Translates to: KIFLLMLQVTQSTVGEVQLHRHC*HKVQGS Trigger: TGAGCCCTGCACTTTATGTCAGCAATGTCTGTGGAG...TTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR GCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGGTACAACTCCTTAAATaGCAAGAAGCAGACTTAACA	+
Preference number: 2 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWVQLLK*QEADLT Trigger: TGTTAAGTCTGCTTCTTGGCATTTAAGGAGTTGTAC...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR CCA 90 bp	TGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTATAGATTATTCCCATaGATAGAACTCCCCCTATTC	+
Preference number: 2 (lower is better) Translates to: CYICATDQPIHVCSLVGGYRLFP*IELPLF Trigger: GAATAGGGGGAGTTCTATCCATGGGAATAATCTATA...GCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR CCA 90 bp	AAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAAGAGATCAAAATCTGTTaGGAGCAGCCTTCCAGAACC	+
Preference number: 2 (lower is better) Translates to: KIFLLMLQVTQSTVGEVQEIKIC*EQPSRT Trigger: GGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTC...TTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR TCA 90 bp	AAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAATTTCTAGGATGGAAATaGGAGAGTGACACACCAGTC	+
Preference number: 2 (lower is better) Translates to: KIFLLMLQVTQSTVGEVQFLGWK*ESDTPV Trigger: GACTGGTGTGTCACTCTCTCATTTCCATCCTAGAAA...TTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR TCA 90 bp	GTCACCAGTCAGATACAGATATGGCTCTACAGCATACAGGCACCGATAGACAGAGTCATAAACAGCATATaGCAGACACATTACAGACTT	+
Preference number: 2 (lower is better) Translates to: VTSQIQIWLYSIQAPIDRVINSI*QTHYRL Trigger: AAGTCTGTAATGTGTCTGTCATATGCTGTTTATGAC...TCTGTCTATCGGTGCCTGTATGCTGTAGAGCCATATCTGTATCTGACTGGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR CCA 90 bp	TGTTCTCAAAATCAGAGATCAAAATCTGTTGGGAGCAGCCTTCCAGAACCCTCCAGAAAAGCAAGGCAATaGAAGGCTGTTTGTTCTTTA	+
Preference number: 2 (lower is better) Translates to: CSQNQRSKSVGSSLPEPSRKARQ*KAVCSL Trigger: TAAAGAACAAACAGCCTTCCATTGCCTTGCTTTTCT...GGAGGGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTCTGATTTTGAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CAA 90 bp	TTTGAAAATAACCCTTTGACATTTGAAACTAACAATTGCAGATTTTaGGCTCACCACTGGAAGGACAGTCTTCTCAGACAACCGACAGGT	+
Preference number: 2 (lower is better) Translates to: FENNPLTFETNNCRF*AHHWKDSLLRQPTG Trigger: ACCTGTCGGTTGTCTGAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAATGTCAAAGGGTTATTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CAA 90 bp	CCCAGAATGGCACACAGAAGGACAACAGCCAACGTGGAATGCATGTaGTATCTTTCAGTAATATGTGCTATAAGAAGTAATATGTGCTAT	+
Preference number: 2 (lower is better) Translates to: PRMAHRRTTANVECM*YLSVICAIRSNMCY Trigger: ATAGCACATATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGCTGTTGTCCTTCTGTGTGCCATTCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR GCA 90 bp	GCCAATGTTCAGATGCTACATTTCTTACACGGCCAAAGTGACCAAAATTACCAAACAGCCAACGTGGAATaGATGTTGTATCTTTCAGTA	+
Preference number: 2 (lower is better) Translates to: ANVQMLHFLHGQSDQNYQTANVE*MLYLSV Trigger: TACTGAAAGATACAACATGCATTCCACGTTGGCTGT...TTGGTAATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR CCA 90 bp	ACTTGCTACACTGAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACACAATTGCAGATTTTTaGCTCACCACTGGAAGGACA	+
Preference number: 2 (lower is better) Translates to: TCYTETESATKQLIVYTHTIADF*LTTGRT Trigger: TGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGT...GTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTCAGTGTAGCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 72 bp	GCACTGGGATCTCCTTCACACCTCCCCACTGAGGGGTaGGCTGACCGTAAACTGACCAGCGCTGGGATCCCA	+
Preference number: 3 (lower is better) Translates to: ALGSPSHLPTEG*ADRKLTSAGIP Trigger: TGGGATCCCAGCGCTGGTCAGTTTACGGTCAGCCCACCCCTCAGTGGGGAGGTGTGAAGGAGATCCCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	TCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTaGTCCCCCACATACCCACCCTCTTCTACCCTCCAC	+
Preference number: 3 (lower is better) Translates to: SSYLASPLPLRG*SPTYPPSSTLH Trigger: GTGGAGGGTAGAAGAGGGTGGGTATGTGGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 72 bp	CCCTTTGCCTCCTTCGCAGAAGGAGGATCTCCTGCATaGATCTGCTGGCTGACACGCAGGCCTGCAGTTCAC	+
Preference number: 3 (lower is better) Translates to: PFASFAEGGSPA*ICWLTRRPAVH Trigger: GTGAACTGCAGGCCTGCGTGTCAGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CTTTCCCTTTGCCTCCTTCGCAGAAGGAGGATCTCCTaGATGGATCTGCTGGCTGACACGCAGGCCTGCAGT	+
Preference number: 3 (lower is better) Translates to: LSLCLLRRRRIS*MDLLADTQACS Trigger: ACTGCAGGCCTGCGTGTCAGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CAGCGTGGACAGGGTACTCCACAGGAGGCTTCTGTCTaGCTGCACTGCCTTGTTACAGGGTGGGAAGAAGGA	+
Preference number: 3 (lower is better) Translates to: QRGQGTPQEASV*LHCLVTGWEEG Trigger: TCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCACGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	TCCTTCGCAGAAGGAGGATCTCCTGCATGGATCTGCTaGCTGACACGCAGGCCTGCAGTTCACTCCCTTGCA	+
Preference number: 3 (lower is better) Translates to: SFAEGGSPAWIC*LTRRPAVHSLA Trigger: TGCAAGGGAGTGAACTGCAGGCCTGCGTGTCAGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CTGTGTAGACTCTGGCTTAAGGCGGGGCTTTCCCTTTaGCTCCTTCGCAGAAGGAGGATCTCCTGCATGGAT	+
Preference number: 3 (lower is better) Translates to: LCRLWLKAGLSL*LLRRRRISCMD Trigger: ATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGGAAAGCCCCGCCTTAAGCCAGAGTCTACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CAGGGTACTCCACAGGAGGCTTCTGTCTGCCTGCACTaGCTTGTTACAGGGTGGGAAGAAGGAAGCATCAGT	+
Preference number: 3 (lower is better) Translates to: QGTPQEASVCLH*LVTGWEEGSIS Trigger: ACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CAGAGCACAGTGGGCGAGGTTCAAAGCTCTGGGTGCTaGTGCTGCTTGAAGCTCTGTTATGAACTGCATGCT	+
Preference number: 3 (lower is better) Translates to: QSTVGEVQSSGC*CCLKLCYELHA Trigger: AGCATGCAGTTCATAACAGAGCTTCAAGCAGCAGCAGCACCCAGAGCTTTGAACCTCGCCCACTGTGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	ATCCTGGGAGCAGGAGGCTGGATGTGCACAGCTAGTTaGGCGGATGGTACCAAGTCCTATGGAAACTGTTCT	+
Preference number: 3 (lower is better) Translates to: ILGAGGWMCTAS*ADGTKSYGNCS Trigger: AGAACAGTTTCCATAGGACTTGGTACCATCCGCCCAACTAGCTGTGCACATCCAGCCTCCTGCTCCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	ATACTCCAGCCAGGGAACTGTCTCACAGCAGTGCTCTaGCCATGCCGCTGCTATCAGGGAACTGAGAAGATA	+
Preference number: 3 (lower is better) Translates to: ILQPGNCLTAVL*PCRCYQGTEKI Trigger: TATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCTGTGAGACAGTTCCCTGGCTGGAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	CCTGGTCCTGAGGAAACAGCAGTACACGATAACGAGTaGGGGTTACAAGGCCATCTAGAGCCTCTACCCATC	+
Preference number: 3 (lower is better) Translates to: PGPEETAVHDNE*GLQGHLEPLPI Trigger: GATGGGTAGAGGCTCTAGATGGCCTTGTAACCCTCACTCGTTATCGTGTACTGCTGTTTCCTCAGGACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	GCTGACACGCAGGCCTGCAGTTCACTCCCTTGCATTTaGTCCCACAGCATCACTCTTAGCCACTTTTCATTC	+
Preference number: 3 (lower is better) Translates to: ADTQACSSLPCI*SHSITLSHFSF Trigger: GAATGAAAAGTGGCTAAGAGTGATGCTGTGGGAGCAAATGCAAGGGAGTGAACTGCAGGCCTGCGTGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CATCCAGTGGACCACAGGTCACATACTTTAGACTGCTaGCTAGGTGTAGTGACCCAGGCCACTGTGAAGAGT	+
Preference number: 3 (lower is better) Translates to: HPVDHRSHTLDC*LGVVTQATVKS Trigger: ACTCTTCACAGTGGCCTGGGTCACTACACCTAGGCAGCAGTCTAAAGTATGTGACCTGTGGTCCACTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	GAGGCTTCTGTCTGCCTGCACTGCCTTGTTACAGGGTaGGAAGAAGGAAGCATCAGTCACCAGTCAGATACA	+
Preference number: 3 (lower is better) Translates to: EASVCLHCLVTG*EEGSISHQSDT Trigger: TGTATCTGACTGGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGCCGTCAGAAGCTAGACCAGAGCAACAGGTCCCCTTaGACTGAAGTTAAAGATCATAGTGAGCGACCCCAC	+
Preference number: 3 (lower is better) Translates to: SRQKLDQSNRSP*TEVKDHSERPH Trigger: GTGGGGTCGCTCACTATGATCTTTAACTTCAGTTCAAGGGGACCTGTTGCTCTGGTCTAGCTTCTGACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR GCA 72 bp	ACTGAGGTCAGACAAGGAGGTCCTCTGCTACATATGTaGCACAGACCAGCCCATCCATGTATGCTCTTTGGT	+
Preference number: 3 (lower is better) Translates to: TEVRQGGPLLHM*HRPAHPCMLFG Trigger: ACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGGACCTCCTTGTCTGACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR GCA 72 bp	TATCCTTTCCCACTGAGGTCAGACAAGGAGGTCCTCTaGTACATATGTGCCACAGACCAGCCCATCCATGTA	+
Preference number: 3 (lower is better) Translates to: YPFPLRSDKEVL*YICATDQPIHV Trigger: TACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGGACCTCCTTGTCTGACCTCAGTGGGAAAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR GCA 72 bp	ACAGTGGGCGAGGTTCAAAGCTCTGGGTGCTGCTGCTaGTTGAAGCTCTGTTATGAACTGCATGCTAATGGA	+
Preference number: 3 (lower is better) Translates to: TVGEVQSSGCCC*LKLCYELHANG Trigger: TCCATTAGCATGCAGTTCATAACAGAGCTTCAAGCAGCAGCAGCACCCAGAGCTTTGAACCTCGCCCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	GGGAACTGTCTCACAGCAGTGCTCTGGCCATGCCGCTaGTATCAGGGAACTGAGAAGATATTCCTATTAATG	+
Preference number: 3 (lower is better) Translates to: GNCLTAVLWPCR*YQGTEKIFLLM Trigger: CATTAATAGGAATATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCTGTGAGACAGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	TATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTaGTTGGTGGCTTTGTCTCTGGGACCTAGGTGTAAT	+
Preference number: 3 (lower is better) Translates to: YVPQTSPSMYAL*LVALSLGPRCN Trigger: ATTACACCTAGGTCCCAGAGACAAAGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR CAA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGAACAATTGCAGATTTTaGGCTCACCACTGGAAGGAC	+
Preference number: 3 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWNNCRF*AHHWKD Trigger: GTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTT...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR TCA 72 bp	GTCCCTCAACACGTGACTGTAAGTCAGGAAGAACACTaGGCACAGTCAGCTACTTGCTACACTGAGACTGAA	+
Preference number: 3 (lower is better) Translates to: VPQHVTVSQEEH*AQSATCYTETE Trigger: TTCAGTCTCAGTGTAGCAAGTAGCTGACTGTGCTCAGTGTTCTTCCTGACTTACAGTCACGTGTTGAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 72 bp	TGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTaGTGGCTTTGTCTCTGGGACCTAGGTGTAATTAAT	+
Preference number: 3 (lower is better) Translates to: CHRPAHPCMLFG*WLCLWDLGVIN Trigger: ATTAATTACACCTAGGTCCCAGAGACAAAGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CCA 72 bp	CAGCCTTCCAGAACCCTCCACAAGTTTAAGACAGTTTaGAAAGACAAGGCAAATGGAAGGCAGGCAGTCCTT	+
Preference number: 3 (lower is better) Translates to: QPSRTLHKFKTV*KDKANGRQAVL Trigger: AAGGACTGCCTGCCTTCCATTTGCCTTGTCTTTCCAAACTGTCTTAAACTTGTGGAGGGTTCTGGAAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGCAGTGCTCTGGCCATGCCGCTGCTATCAGGGAACTaGGAAGATATTCCTATTAATGTTACAAGTCACCCA	+
Preference number: 3 (lower is better) Translates to: SSALAMPLLSGN*EDIPINVTSHP Trigger: TGGGTGACTTGTAACATTAATAGGAATATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CACACCAGTCTCATAATGAGGCTCCTTAACATAGTGTaGTCATCCAGGAATGCTGCTGTTAACAGCACATGG	+
Preference number: 3 (lower is better) Translates to: HTSLIMRLLNIV*SSRNAAVNSTW Trigger: CCATGTGCTGTTAACAGCAGCATTCCTGGATGAGCACACTATGTTAAGGAGCCTCATTATGAGACTGGTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	AAGAAGGAAGCATCAGTCACCAGTCAGATACAGATATaGCTCTACAGCATACAGGCACCGATAGACAGACAG	+
Preference number: 3 (lower is better) Translates to: KKEASVTSQIQI*LYSIQAPIDRQ Trigger: CTGTCTGTCTATCGGTGCCTGTATGCTGTAGAGCCATATCTGTATCTGACTGGTGACTGATGCTTCCTTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR-3UTR CAA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGCCTTCTCTTCATATTTaGATCAAACATTCTGGGAAG	+
Preference number: 3 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWPSLHI*IKHSGK Trigger: CTTCCCAGAATGTTTGATCAAAATATGAAGAGAAGG...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR CAA 90 bp	AGGAAGGCTTGGGCACTGGACAGTGACTTAATGATGGTAACCAATGACGCCAGCTTAACACATGATTCATaGCCTAAGGGCATCAAAAAG	+
Preference number: 3 (lower is better) Translates to: RKAWALDSDLMMVTNDASLTHDS*PKGIKK Trigger: CTTTTTGATGCCCTTAGGCAATGAATCATGTGTTAA...GCTGGCGTCATTGGTTACCATCATTAAGTCACTGTCCAGTGCCCAAGCCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGTGAAATCAAAGGGAACAATGTCTCCTTGTCAGTGTaGCTTCAATGTCAGCGCTCCTTCCACAAACACCAC	+
Preference number: 3 (lower is better) Translates to: SEIKGNNVSLSV*LQCQRSFHKHH Trigger: GTGGTGTTTGTGGAAGGAGCGCTGACATTGAAGTCACACTGACAAGGAGACATTGTTCCCTTTGATTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	CAAGTGTCCTATGAGAACATGGCACGGAGTTCACAGTaGAATCAAAGGGAACAATGTCTCCTTGTCAGTGTG	+
Preference number: 3 (lower is better) Translates to: QVSYENMARSSQ*NQREQCLLVSV Trigger: CACACTGACAAGGAGACATTGTTCCCTTTGATTTCACTGTGAACTCCGTGCCATGTTCTCATAGGACACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	CTAATATTGCAGGTGCATAAAACATCACTGCAAGGTTaGCAACAAAAACTGCTATATCCTGGGAGCAGGAGG	+
Preference number: 3 (lower is better) Translates to: LILQVHKTSLQG*QQKLLYPGSRR Trigger: CCTCCTGCTCCCAGGATATAGCAGTTTTTGTTGGCAACCTTGCAGTGATGTTTTATGCACCTGCAATATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	AGTGTAGCAATATATCCAAAGACTGCCACCCATTACTaGATAGCCTCTCAATGCCTACTCTTTACTGTAGGC	+
Preference number: 3 (lower is better) Translates to: SVAIYPKTATHY*IASQCLLFTVG Trigger: GCCTACAGTAAAGAGTAGGCATTGAGAGGCTATGCAGTAATGGGTGGCAGTCTTTGGATATATTGCTACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTaGAAGGACAGTCTTCTCAGACAACCGACAGGTCCT	+
Preference number: 3 (lower is better) Translates to: FETNNCRFLAHH*KDSLLRQPTGP Trigger: AGGACCTGTCGGTTGTCTGAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR TCA 72 bp	AGCTTTCCTACACCTCATCCATCCAAACGCTATGCTTaGCTTCATAATGAATCCCTGTGCACTTCTAATTGC	+
Preference number: 3 (lower is better) Translates to: SFPTPHPSKRYA*LHNESLCTSNC Trigger: GCAATTAGAAGTGCACAGGGATTCATTATGAAGTCAAGCATAGCGTTTGGATGGATGAGGTGTAGGAAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	GTAGGGACTGTTTTGTACAAGTGTCCTATGAGAACATaGCACGGAGTTCACAGTGAAATCAAAGGGAACAAT	+
Preference number: 3 (lower is better) Translates to: VGTVLYKCPMRT*HGVHSEIKGNN Trigger: ATTGTTCCCTTTGATTTCACTGTGAACTCCGTGCCATGTTCTCATAGGACACTTGTACAAAACAGTCCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	TTATCTAGCCCCTTTTCTAGGATGGAAATGAGAGAGTaGCACACCAGTCTCATAATGAGGCTCCTTAACATA	+
Preference number: 3 (lower is better) Translates to: LSSPFSRMEMRE*HTSLIMRLLNI Trigger: TATGTTAAGGAGCCTCATTATGAGACTGGTGTGTCACTCTCTCATTTCCATCCTAGAAAAGGGGCTAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGCTCTCTACCTTCTTGGAGACGCTACGATGAAATTTaGGCATTTCTGATGAGTTATAGCAGACGCAACAAA	+
Preference number: 3 (lower is better) Translates to: SSLPSWRRYDEI*AFLMSYSRRNK Trigger: TTTGTTGCGTCTGCTATAACTCATCAGAAATGCTCAAATTTCATCGTAGCGTCTCCAAGAAGGTAGAGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	GAAACATATCCACAGAAGAGACGGCCAATGTTCAGATaGTACATTTCTTACACGGCCAAAGTGACCAAAATT	+
Preference number: 3 (lower is better) Translates to: ETYPQKRRPMFR*YISYTAKVTKI Trigger: AATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGCCGTCTCTTCTGTGGATATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	TCTACCCATCCATTTATTCAGAGGAACACACTTCACTaGTCTGTGTGTTTTCCTGTACTTTATTGTTGTGGC	+
Preference number: 3 (lower is better) Translates to: STHPFIQRNTLH*SVCFPVLYCCG Trigger: GCCACAACAATAAAGTACAGGAAAACACACAGAGCAGTGAAGTGTGTTCCTCTGAATAAATGGATGGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR CCA 72 bp	CATCCATGTATGCTCTTTGGTTGGTGGCTTTGTCTCTaGGACCTAGGTGTAATTAATGTTTCTATGTGTATG	+
Preference number: 3 (lower is better) Translates to: HPCMLFGWWLCL*DLGVINVSMCM Trigger: CATACACATAGAAACATTAATTACACCTAGGTCCCAGAGACAAAGCCACCAACCAAAGAGCATACATGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR-3UTR CAA 90 bp	AAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAAGCAATGGAAGGCTGTTaGTTCTTTAATTTTGAGTTG	+
Preference number: 3 (lower is better) Translates to: KIFLLMLQVTQSTVGEVQAMEGC*FFNFEL Trigger: CAACTCAAAATTAAAGAACAAACAGCCTTCCATTGC...TTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGTTCATTACCAACTGCCATTTGTCATAAAGTCACTTaGCCCCATAGCATTTCAATGGCATGCAAAGCCATT	+
Preference number: 3 (lower is better) Translates to: SSLPTAICHKVT*PHSISMACKAI Trigger: AATGGCTTTGCATGCCATTGAAATGCTATGGGGTCAAGTGACTTTATGACAAATGGCAGTTGGTAATGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	CACTTCTCTGATTGTGAGATAGGAAGAGAGAATGAGTaGCCGAGTCATAAACAGCATATGACAGACACATTA	+
Preference number: 3 (lower is better) Translates to: HFSDCEIGRENE*PSHKQHMTDTL Trigger: TAATGTGTCTGTCATATGCTGTTTATGACTCGGTCACTCATTCTCTCTTCCTATCTCACAATCAGAGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR GCA 72 bp	TATCTTTCAAACTATCATAATAAACAGCAAAGCAGCTaGTCCACAGCTTTCCTACACCTCATCCATCCAAAC	+
Preference number: 3 (lower is better) Translates to: YLSNYHNKQQSS*STAFLHLIHPN Trigger: GTTTGGATGGATGAGGTGTAGGAAAGCTGTGGAGCAGCTGCTTTGCTGTTTATTATGATAGTTTGAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
3UTR TCA 72 bp	AGTTATTTCTACATGGGCCTCATCTCTTCAATAGGCTaGTGCTCTCAGCCAATTAGAAGTTACCTTTTAAAG	+
Preference number: 3 (lower is better) Translates to: SYFYMGLISSIG*CSQPIRSYLLK Trigger: CTTTAAAAGGTAACTTCTAATTGGCTGAGAGCATCAGCCTATTGAAGAGATGAGGCCCATGTAGAAATAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	AAGAGTTCTTCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTGCTCCCCCGCTGAGCTTGGGCTTTaGGGTCTTCCTCTTGGAGCT	+
Preference number: 4 (lower is better) Translates to: KSSSSYLASPLPLRGCSPAELGL*GLPLGA Trigger: AGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGC...GGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGAAGAACTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
3UTR CAA 72 bp	GTACTCCACAGGAGGCTTCTGTCTGCCTGCACTGCCTaGTTACAGGGTGGGAAGAAGGAAGCATCAGTCACC	+
Preference number: 4 (lower is better) Translates to: VLHRRLLSACTA*LQGGKKEASVT Trigger: GGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	AAGAGTTCTTCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTGCTCCCCCGCTCTCATGTCCACATaGGTAGCCAAAAGTTCTTCT	+
Preference number: 4 (lower is better) Translates to: KSSSSYLASPLPLRGCSPALMST*VAKSSS Trigger: AGAAGAACTTTTGGCTACTCATGTGGACATGAGAGC...GGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGAAGAACTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	AGAGCAACAGGTCCCCTTGAACTGAAGTTAAAGATCATAGTGAGCGACCCCACATGTTCCTGCAGGCTATaGGCCAGGGTGTGGTCCTCC	+
Preference number: 4 (lower is better) Translates to: RATGPLELKLKIIVSDPTCSCRL*ARVWSS Trigger: GGAGGACCACACCCTGGCCCATAGCCTGCAGGAACA...TGTGGGGTCGCTCACTATGATCTTTAACTTCAGTTCAAGGGGACCTGTTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	GCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTGCATCATACCACTCCTaGTCCCTGTGGCTTGCTCGT	+
Preference number: 4 (lower is better) Translates to: ATYVPQTSPSMYALWLVAASYHS*SLWLAR Trigger: ACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGC...AGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	AGAGCAACAGGTCCCCTTGAACTGAAGTTAAAGATCATAGTGAGCGACCCCACACTATGGGCCAGGGTGTaGTCCTCCAGGACGGCAAAA	+
Preference number: 4 (lower is better) Translates to: RATGPLELKLKIIVSDPTLWARV*SSRTAK Trigger: TTTTGCCGTCCTGGAGGACCACACCCTGGCCCATAG...TGTGGGGTCGCTCACTATGATCTTTAACTTCAGTTCAAGGGGACCTGTTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTT	+
Preference number: 4 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWVACSC*SRDSFF Trigger: AAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCAC...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	GCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTCCTTCTTTTCCTGAATaGGTCGTCTCTCAGCCTCAA	+
Preference number: 4 (lower is better) Translates to: ATYVPQTSPSMYALWLVAPSFPE*VVSQPQ Trigger: TTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGG...AGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGCCGCTGAATGTTGGATaGCAAATGATGCTCAATCTC	+
Preference number: 4 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWPLNVG*QMMLNL Trigger: GAGATTGAGCATCATTTGGCATCCAACATTCAGCGG...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	AGGTCCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTGTAGCTCCTTCTCTTaGAAAAGACGTGCTATGTCC	+
Preference number: 4 (lower is better) Translates to: RSSATYVPQTSPSMYALWCSSFS*KRRAMS Trigger: GGACATAGCACGTCTTTTGCAAGAGAAGGAGCTACA...CCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCCTATGGGCCAGGGTGTaGTCCTCCAGGACGGCAAAA	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPLWARV*SSRTAK Trigger: TTTTGCCGTCCTGGAGGACCACACCCTGGCCCATAG...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGGTCTCTCAGCCTCAATaGTTAGCTTCTCCTGGATTT	+
Preference number: 4 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWVSQPQ*LASPGF Trigger: AAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGAC...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR TCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCGCTGAGCTTGGGCTTTaGGGTCTTCCTCTTGGAGCT	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPAELGL*GLPLGA Trigger: AGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGC...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	ACAGGAAGTCAAGCTGGGAAAATGGCAATCATATATAGGTTCAGCATAGCTGCCAGGTGGTGGTGGTCTTaGTGGCCTGTCAATCTTGGA	+
Preference number: 4 (lower is better) Translates to: TGSQAGKMAIIYRFSIAARWWWS*WPVNLG Trigger: TCCAAGATTGACAGGCCATCAAGACCACCACCACCT...GGCAGCTATGCTGAACCTATATATGATTGCCATTTTCCCAGCTTGACTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGCTATGGGCCAGGGTGTaGTCCTCCAGGACGGCAAAA	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLLWARV*SSRTAK Trigger: TTTTGCCGTCCTGGAGGACCACACCCTGGCCCATAG...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTTGCTCACAGGCAGTCTaGGCACCATCCCTCCCTCTG	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFCSQAV*APSLPL Trigger: CAGAGGGAGGGATGGTGCCCAGACTGCCTGTGAGCA...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TGCCTAAGGGCATCAAAAAGACCTGGTCCTGAGGAAACAGCAGTACACGATAACCCGCTGAATGTTGGATaGCAAATGATGCTCAATCTC	+
Preference number: 4 (lower is better) Translates to: CLRASKRPGPEETAVHDNPLNVG*QMMLNL Trigger: GAGATTGAGCATCATTTGGCATCCAACATTCAGCGG...GTTATCGTGTACTGCTGTTTCCTCAGGACCAGGTCTTTTTGATGCCCTTAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR GCA 90 bp	TGTTCTCAAAATCAGAGATCAAAATCTGTTGGGAGCAGCCTTCCAGAACCCTCCTCTTCCTCTTGGAGCTaGTTAGCAACCTGCAGATCA	+
Preference number: 4 (lower is better) Translates to: CSQNQRSKSVGSSLPEPSSSSWS*LATCRS Trigger: TGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGA...GGAGGGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTCTGATTTTGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTACTATGGGCCAGGGTGTaGTCCTCCAGGACGGCAAAA	+
Preference number: 4 (lower is better) Translates to: SNMCYTKSIFEADPFLFVLWARV*SSRTAK Trigger: TTTTGCCGTCCTGGAGGACCACACCCTGGCCCATAG...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	TGCCTAAGGGCATCAAAAAGACCTGGTCCTGAGGAAACAGCAGTACACGATAACGGTTCCGCTGAATGTTaGATGCCAAATGATGCTCAA	+
Preference number: 4 (lower is better) Translates to: CLRASKRPGPEETAVHDNGSAEC*MPNDAQ Trigger: TTGAGCATCATTTGGCATCCAACATTCAGCGGAACC...GTTATCGTGTACTGCTGTTTCCTCAGGACCAGGTCTTTTTGATGCCCTTAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	TGTCAGCGCTCCTTCCACAAACACCACCCTCCCCAAATGGAAGTAGCCATTTACCTTCTTGCAATTTCCTaGCAATTTCAGCATCATACC	+
Preference number: 4 (lower is better) Translates to: CQRSFHKHHPPQMEVAIYLLAIS*QFQHHT Trigger: GGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAG...GTAAATGGCTACTTCCATTTGGGGAGGGTGGTGTTTGTGGAAGGAGCGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	TGTTCTCAAAATCAGAGATCAAAATCTGTTGGGAGCAGCCTTCCAGAACCCTCCCCTTTTGTCCAAAGATaGCTTTTCTCGCTCTTTGGC	+
Preference number: 4 (lower is better) Translates to: CSQNQRSKSVGSSLPEPSPFVQR*LFSLFG Trigger: GCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGG...GGAGGGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTCTGATTTTGAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTAAGGCAGGGACCTCTCTaGTGGGTGGTGTTCTTCCAG	+
Preference number: 4 (lower is better) Translates to: NMCYTKSIFEADPFLFVLRQGPL*WVVFFQ Trigger: CTGGAAGAACACCACCCATCAGAGAGGTCCCTGCCT...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCGCCCCCAGAAAACTCTaGAGTGTGTTTCTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPAPRKL*SVFLPP Trigger: AGGAGGAAGAAACACACTCCAGAGTTTTCTGGGGGC...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTCTTTTGACTTTGAGTaGGCTGACTTTGCTTTTAAC	+
Preference number: 4 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWSFDFE*ADFAFN Trigger: GTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGA...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR TCA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTAGCTGAGCTTGGGCTTTaGGGTCTTCCTCTTGGAGCT	+
Preference number: 4 (lower is better) Translates to: NMCYTKSIFEADPFLFVLAELGL*GLPLGA Trigger: AGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGC...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGCTGAGCTTGGGCTTTaGGGTCTTCCTCTTGGAGCT	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADAELGL*GLPLGA Trigger: AGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCTCATCCTTCTTTTCCTaGATGCGTCGTCTCTCAGCC	+
Preference number: 4 (lower is better) Translates to: FETNNCRFLAHHWKDSLLSSFFS*MRRLSA Trigger: GGCTGAGAGACGACGCATTCAGGAAAAGAAGGATGA...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR TCA 90 bp	ACAGGAAGTCAAGCTGGGAAAATGGCAATCATATATAGGTTCAGCATAGCTGCCGCTCTCATGTCCACATaGGTAGCCAAAAGTTCTTCT	+
Preference number: 4 (lower is better) Translates to: TGSQAGKMAIIYRFSIAAALMST*VAKSSS Trigger: AGAAGAACTTTTGGCTACTCATGTGGACATGAGAGC...GGCAGCTATGCTGAACCTATATATGATTGCCATTTTCCCAGCTTGACTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTAGGTGGTGGTGGTCTTaGTGGCCTGTCAATCTTGGA	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFRWWWS*WPVNLG Trigger: TCCAAGATTGACAGGCCATCAAGACCACCACCACCT...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTTTCCAGAGCCTCTCCTaGCCAGATCGCTTTCTTTCC	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFFQSLS*PDRFLS Trigger: GGAAAGAAAGCGATCTGGTCAGGAGAGGCTCTGGAA...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTGCCCCCAGAAAACTCTaGAGTGTGTTTCTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFAPRKL*SVFLPP Trigger: AGGAGGAAGAAACACACTCCAGAGTTTTCTGGGGGC...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAATGTTCAGATGCTACATTTCTTACACGGCCAAAGTGACCAAAATTACCAAGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTT	+
Preference number: 4 (lower is better) Translates to: ANVQMLHFLHGQSDQNYQVACSC*SRDSFF Trigger: AAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCAC...TTGGTAATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTT	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFVACSC*SRDSFF Trigger: AAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCAC...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTAGCATCATACCACTCCTaGTCCCTGTGGCTTGCTCGT	+
Preference number: 4 (lower is better) Translates to: NMCYTKSIFEADPFLFVLASYHS*SLWLAR Trigger: ACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGC...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	CCTCTGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGACTTTTCTCGCTCTTTaGCTTTCTTGTAAGCTTTTT	+
Preference number: 4 (lower is better) Translates to: PLLHMCHRPAHPCMLFGWTFLAL*LSCKLF Trigger: AAAAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGT...CCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTAGAAGGGAGAAGTCCTaGGCCTATGTCTCCTTTCTC	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFRREKS*AYVSFL Trigger: GAGAAAGGAGACATAGGCCCAGGACTTCTCCCTTCT...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCGCTCTCATGTCCACATaGGTAGCCAAAAGTTCTTCT	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPALMST*VAKSSS Trigger: AGAAGAACTTTTGGCTACTCATGTGGACATGAGAGC...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATAGGTGGTGGTGGTCTTaGTGGCCTGTCAATCTTGGA	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADRWWWS*WPVNLG Trigger: TCCAAGATTGACAGGCCATCAAGACCACCACCACCT...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCCCGCTGAATGTTGGATaGCAAATGATGCTCAATCTC	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPPLNVG*QMMLNL Trigger: GAGATTGAGCATCATTTGGCATCCAACATTCAGCGG...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCTCTTCCTCTTGGAGCTaGTTAGCAACCTGCAGATCA	+
Preference number: 4 (lower is better) Translates to: FETNNCRFLAHHWKDSLLSSSWS*LATCRS Trigger: TGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGA...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTCTTCCTCTTGGAGCTaGTTAGCAACCTGCAGATCA	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLSSSWS*LATCRS Trigger: TGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGA...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTCCTTCTTTTCCTGAATaGGTCGTCTCTCAGCCTCAA	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFPSFPE*VVSQPQ Trigger: TTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGG...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTGTAGCTCCTTCTCTTaGAAAAGACGTGCTATGTCC	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPCSSFS*KRRAMS Trigger: GGACATAGCACGTCTTTTGCAAGAGAAGGAGCTACA...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GCCAACGTGGAATGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATCGCTTTCTTTCCTGCTaGTCACAGGCAGTCTGGGCA	+
Preference number: 4 (lower is better) Translates to: ANVECMLYLSVICAIRSNRFLSC*SQAVWA Trigger: TGCCCAGACTGCCTGTGAGCAGCAGGAAAGAAAGCG...ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTT	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFVACSC*SRDSFF Trigger: AAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCAC...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAACGTGGAATGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATGCATCATACCACTCCTaGTCCCTGTGGCTTGCTCGT	+
Preference number: 4 (lower is better) Translates to: ANVECMLYLSVICAIRSNASYHS*SLWLAR Trigger: ACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGC...ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATTGTCTCCTTTCTCTGTaGTCACCTTGCCCAAGGTCC	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADCLLSL*SPCPRS Trigger: GGACCTTGGGCAAGGTGACCACAGAGAAAGGAGACA...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
3UTR CAA 72 bp	AGGTGTAGTGACCCAGGCCACTGTGAAGAGTTTTCTTaGGGCACATTTTTATGCATACCTCTCTTCCTAATT	+
Preference number: 4 (lower is better) Translates to: RCSDPGHCEEFS*GTFLCIPLFLI Trigger: AATTAGGAAGAGAGGTATGCATAAAAATGTGCCCAAAGAAAACTCTTCACAGTGGCCTGGGTCACTACACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCCCTTTTGTCCAAAGATaGCTTTTCTCGCTCTTTGGC	+
Preference number: 4 (lower is better) Translates to: FETNNCRFLAHHWKDSLLPFVQR*LFSLFG Trigger: GCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGG...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR TCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGCCTTTTGTCCAAAGATaGCTTTTCTCGCTCTTTGGC	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLPFVQR*LFSLFG Trigger: GCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGG...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTACCTTCTTTTCCTGAATaGGTCGTCTCTCAGCCTCAA	+
Preference number: 4 (lower is better) Translates to: SNMCYTKSIFEADPFLFVPSFPE*VVSQPQ Trigger: TTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGG...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTGTAGCTCCTTCTCTTaGAAAAGACGTGCTATGTCC	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLCSSFS*KRRAMS Trigger: GGACATAGCACGTCTTTTGCAAGAGAAGGAGCTACA...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTGCCATGTTGTACTGTaGTGGTTTGTAAAATGGGTG	+
Preference number: 4 (lower is better) Translates to: CAIRSNMCYTKSIFEADPCHVVL*WFVKWV Trigger: CACCCATTTTACAAACCAGCACAGTACAACATGGCA...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGGGTTCCGCTGAATGTTaGATGCCAAATGATGCTCAA	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLGSAEC*MPNDAQ Trigger: TTGAGCATCATTTGGCATCCAACATTCAGCGGAACC...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAATGTTCAGATGCTACATTTCTTACACGGCCAAAGTGACCAAAATTACCAAGTCTCTCAGCCTCAATaGTTAGCTTCTCCTGGATTT	+
Preference number: 4 (lower is better) Translates to: ANVQMLHFLHGQSDQNYQVSQPQ*LASPGF Trigger: AAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGAC...TTGGTAATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTGTCTCTCAGCCTCAATaGTTAGCTTCTCCTGGATTT	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFVSQPQ*LASPGF Trigger: AAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGAC...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACAACCACAGAAAGGCCCCCAGAAAACTCTaGAGTGTGTTTCTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: ETESATKQLIVYTHNHRKAPRKL*SVFLPP Trigger: AGGAGGAAGAAACACACTCCAGAGTTTTCTGGGGGC...CTTTCTGTGGTTGTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	TGCCTAAGGGCATCAAAAAGACCTGGTCCTGAGGAAACAGCAGTACACGATAACACTTTTCTCGCTCTTTaGCTTTCTTGTAAGCTTTTT	+
Preference number: 4 (lower is better) Translates to: CLRASKRPGPEETAVHDNTFLAL*LSCKLF Trigger: AAAAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGT...GTTATCGTGTACTGCTGTTTCCTCAGGACCAGGTCTTTTTGATGCCCTTAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGACCTCTCTGATGGGTaGTGTTCTTCCAGATCTTCC	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADDLSDG*CSSRSS Trigger: GGAAGATCTGGAAGAACACCACCCATCAGAGAGGTC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
3UTR CAA 72 bp	AAGGCAATGGAAGGCTGTTTGTTCTTTAATTTTGAGTaGACGCCTCATGGACCTGAGAGAAAGTATCAGACA	+
Preference number: 4 (lower is better) Translates to: KAMEGCLFFNFE*TPHGPERKYQT Trigger: TGTCTGATACTTTCTCTCAGGTCCATGAGGCGTCAACTCAAAATTAAAGAACAAACAGCCTTCCATTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR TCA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATCCAAGTTCTTCTGTTaGTGCCTTGGTTTCTCCTTC	+
Preference number: 4 (lower is better) Translates to: SNMCYTKSIFEADPFLFVSKFFC*CLGFSF Trigger: GAAGGAGAAACCAAGGCATCAACAGAAGAACTTGGA...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTAAAGTTCTTTATCTTCTaGGAAGGGAGAAGTCCTGGG	+
Preference number: 4 (lower is better) Translates to: SNMCYTKSIFEADPFLFVKFFIF*EGRSPG Trigger: CCCAGGACTTCTCCCTTCTCAGAAGATAAAGAACTT...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	ATGCCAAGAAGCAGACTTAACACAGAAATCTCTCCTTTTATATCCCAGTGTCTAAGCTGCTTAGCAACCTaGAGATCATGTTGTACCAGA	+
Preference number: 4 (lower is better) Translates to: MPRSRLNTEISPFISQCLSCLAT*RSCCTR Trigger: TCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCT...TAGACACTGGGATATAAAAGGAGAGATTTCTGTGTTAAGTCTGCTTCTTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCTCTTCCTCTTGGAGCTaGTTAGCAACCTGCAGATCA	+
Preference number: 4 (lower is better) Translates to: VICAIRSNMCYTKSIFEASSSWS*LATCRS Trigger: TGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGA...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTGCCATGTTGTACTGTaGTGGTTTGTAAAATGGGTG	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFCHVVL*WFVKWV Trigger: CACCCATTTTACAAACCAGCACAGTACAACATGGCA...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	ATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTATCTTGGTTTCTCCTTCTaGCTTACAGTCTTCCCATCG	+
Preference number: 4 (lower is better) Translates to: ICAIRSPFSRPIPFCLYYLGFSF*LTVFPS Trigger: CGATGGGAAGACTGTAAGGCAGAAGGAGAAACCAAG...ATAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCACTTGGGTGAAAGTCTaGCATGGTGATGAGACTGCT	+
Preference number: 4 (lower is better) Translates to: VICAIRSNMCYTKSIFEATWVKV*HGDETA Trigger: AGCAGTCTCATCACCATGGCAGACTTTCACCCAAGT...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAACGTGGAATGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATGCCCCCAGAAAACTCTaGAGTGTGTTTCTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: ANVECMLYLSVICAIRSNAPRKL*SVFLPP Trigger: AGGAGGAAGAAACACACTCCAGAGTTTTCTGGGGGC...ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	ATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTATCCTTTTGTCCAAAGATaGCTTTTCTCGCTCTTTGGC	+
Preference number: 4 (lower is better) Translates to: ICAIRSPFSRPIPFCLYYPFVQR*LFSLFG Trigger: GCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGG...ATAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR TCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGAGTCTACAAAACTTTaGGTGTCCAGAACCCAGTTC	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADESTKL*VSRTQF Trigger: GAACTGGGTTCTGGACACTCAAAGTTTTGTAGACTC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCAGCTGCTTAGCAACCTaGAGATCATGTTGTACCAGA	+
Preference number: 4 (lower is better) Translates to: VICAIRSNMCYTKSIFEASCLAT*RSCCTR Trigger: TCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCT...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	TACACTGAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACAACCACGGTTCCGCTGAATGTTaGATGCCAAATGATGCTCAA	+
Preference number: 4 (lower is better) Translates to: YTETESATKQLIVYTHNHGSAEC*MPNDAQ Trigger: TTGAGCATCATTTGGCATCCAACATTCAGCGGAACC...GTGGTTGTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTCAGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGGTTCCGCTGAATGTTaGATGCCAAATGATGCTCAA	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADGSAEC*MPNDAQ Trigger: TTGAGCATCATTTGGCATCCAACATTCAGCGGAACC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGTCTCTCAGCCTCAATaGTTAGCTTCTCCTGGATTT	+
Preference number: 4 (lower is better) Translates to: VICAIRSNMCYTKSIFEAVSQPQ*LASPGF Trigger: AAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGAC...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGCTTCTTGCAATTTCCTaGCAATTTCAGCATCATACC	+
Preference number: 4 (lower is better) Translates to: EVICAIRSPFSRPIPFCLLLAIS*QFQHHT Trigger: GGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAG...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCTTCTGTTGATGCCTTaGTTTCTCCTTCTGCCTTAC	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADLLLMP*FLLLPY Trigger: GTAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAG...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCACTTTGCTTTTAACTTaGATTCAGGGTCATGTTTCC	+
Preference number: 4 (lower is better) Translates to: FETNNCRFLAHHWKDSLLTLLLT*IQGHVS Trigger: GGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGT...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR GCA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTACTTTGCTTTTAACTTaGATTCAGGGTCATGTTTCC	+
Preference number: 4 (lower is better) Translates to: AIRSNMCYTKSIFEADPFTLLLT*IQGHVS Trigger: GGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGT...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATTGCCATGTTGTACTGTaGTGGTTTGTAAAATGGGTG	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADCHVVL*WFVKWV Trigger: CACCCATTTTACAAACCAGCACAGTACAACATGGCA...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTCTTCTTGCAATTTCCTaGCAATTTCAGCATCATACC	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFLLAIS*QFQHHT Trigger: GGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAG...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
3UTR CAA 72 bp	GCACACAGAAGGACAACAGCCAACGTGGAATGCATGTaGTATCTTTCAGTAATATGTGCTATAAGAAGTAAT	+
Preference number: 4 (lower is better) Translates to: AHRRTTANVECM*YLSVICAIRSN Trigger: ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGCTGTTGTCCTTCTGTGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR GCA 90 bp	GGATGGTACCAAGTCCTATGGAAACTGTTCTATTCCTTTGGCTCTATAATTAACACTTTGCTTTTAACTTaGATTCAGGGTCATGTTTCC	+
Preference number: 4 (lower is better) Translates to: GWYQVLWKLFYSFGSIINTLLLT*IQGHVS Trigger: GGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGT...GTTAATTATAGAGCCAAAGGAATAGAACAGTTTCCATAGGACTTGGTACCATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CCA 90 bp	GAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACAACCACAGAAAGCTTCTTGCAATTTCCTaGCAATTTCAGCATCATACC	+
Preference number: 4 (lower is better) Translates to: ETESATKQLIVYTHNHRKLLAIS*QFQHHT Trigger: GGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAG...CTTTCTGTGGTTGTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CCA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATCTTTTGACTTTGAGTaGGCTGACTTTGCTTTTAAC	+
Preference number: 4 (lower is better) Translates to: SNMCYTKSIFEADPFLFVSFDFE*ADFAFN Trigger: GTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGA...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGTCTTCCCATCGTTTTaGAGTCTACAAAACTTTGAG	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADVFPSF*SLQNFE Trigger: CTCAAAGTTTTGTAGACTCCAAAACGATGGGAAGAC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR GCA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATACTTTGCTTTTAACTTaGATTCAGGGTCATGTTTCC	+
Preference number: 4 (lower is better) Translates to: ICAIRSNMCYTKSIFEADTLLLT*IQGHVS Trigger: GGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGT...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTACTTTTCTCGCTCTTTaGCTTTCTTGTAAGCTTTTT	+
Preference number: 4 (lower is better) Translates to: RSNMCYTKSIFEADPFLFTFLAL*LSCKLF Trigger: AAAAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGT...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAACGTGGAATGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATTCTTTTGACTTTGAGTaGGCTGACTTTGCTTTTAAC	+
Preference number: 4 (lower is better) Translates to: ANVECMLYLSVICAIRSNSFDFE*ADFAFN Trigger: GTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGA...ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CCA 90 bp	GCCAACGTGGAATGCATGTTGTATCTTTCAGTAATATGTGCTATAAGAAGTAATACTTTTCTCGCTCTTTaGCTTTCTTGTAAGCTTTTT	+
Preference number: 4 (lower is better) Translates to: ANVECMLYLSVICAIRSNTFLAL*LSCKLF Trigger: AAAAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGT...ATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS TCA 90 bp	GGGATCTGTGTCCTCAAGGCCCATCATGGTAGGTGGTGGTGGTCTTaGTGGCCTGTCAATCTTGGAGCGGTGTGCTTCATCACCCTCTTT	+
Preference number: 5 (lower is better) Translates to: GICVLKAHHGRWWWS*WPVNLGAVCFITLF Trigger: AAAGAGGGTGATGAAGCACACCGCTCCAAGATTGACAGGCCATCAAGACCACCACCACCTACCATGATGGGCCTTGAGGACACAGATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS GCA 90 bp	AAGGGAGAAGTCCTGGGCCTATGTCTCCTTTCTCTGTGGTCACCTTaGCCAAGGTCCCGCCCATATACAATTTCCTTACAGGGAAGTCCT	+
Preference number: 5 (lower is better) Translates to: KGEVLGLCLLSLWSP*PRSRPYTISLQGSP Trigger: AGGACTTCCCTGTAAGGAAATTGTATATGGGCGGGACCTTGGGCAAGGTGACCACAGAGAAAGGAGACATAGGCCCAGGACTTCTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS GCA 90 bp	CCTTACAGGGAAGTCCTGTTTTCTGTGAAGACTTGGGTGAAAGTCTaGCATGGTGATGAGACTGCTTTTCTGGACTCCGGGTTCCAGAGC	+
Preference number: 5 (lower is better) Translates to: PYREVLFSVKTWVKV*HGDETAFLDSGFQS Trigger: GCTCTGGAACCCGGAGTCCAGAAAAGCAGTCTCATCACCATGGCAGACTTTCACCCAAGTCTTCACAGAAAACAGGACTTCCCTGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 90 bp	TTCAGAGTCAATGCTCAGAAATACCTCCCCGCGGATCTTCGGAAGTaGAGATTTCCAGAGCCTCTCCTGACCAGATCGCTTTCTTTCCTG	+
Preference number: 5 (lower is better) Translates to: FRVNAQKYLPADLRK*RFPEPLLTRSLSFL Trigger: CAGGAAAGAAAGCGATCTGGTCAGGAGAGGCTCTGGAAATCTCCACTTCCGAAGATCCGCGGGGAGGTATTTCTGAGCATTGACTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AAGAGTTCTTCCTCCTATCTAGCCTCCCCCTTGCCTCTGAGAGGGTGCTCCCCCCTTCTTTTATTCCTCTaGGTTTCATTCCTCCATCCT	+
Preference number: 5 (lower is better) Translates to: KSSSSYLASPLPLRGCSPLLLFL*VSFLHP Trigger: AGGATGGAGGAATGAAACCAAGAGGAATAAAAGAAG...GGGGGAGCACCCTCTCAGAGGCAAGGGGGAGGCTAGATAGGAGGAAGAACTCTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	GCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTCACCCTCTTTTGACTTaGAGTGGGCTGACTTTGCTT	+
Preference number: 5 (lower is better) Translates to: ATYVPQTSPSMYALWLVAHPLLT*SGLTLL Trigger: AAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTG...AGCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS TCA 90 bp	TGGTTTCATTCCTGCAACATGGTGGTGGCGAAGTTCTTTATCTTCTaGGAAGGGAGAAGTCCTGGGCCTATGTCTCCTTTCTCTGTGGTC	+
Preference number: 5 (lower is better) Translates to: WFHSCNMVVAKFFIF*EGRSPGPMSPFSVV Trigger: GACCACAGAGAAAGGAGACATAGGCCCAGGACTTCTCCCTTCTCAGAAGATAAAGAACTTCGCCACCACCATGTTGCAGGAATGAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS GCA 90 bp	GGCAATTTCAGCATCATACCACTCCTGGTCCCTGTGGCTTGCTCGTaGTGGAGTAGAGACAGCTTCTTTTATTCCTCTTGGTTTCATTCC	+
Preference number: 5 (lower is better) Translates to: GNFSIIPLLVPVACS*WSRDSFFYSSWFHS Trigger: GGAATGAAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 90 bp	TCTGACTTTGGAAGATGCCATGTTGTACTGTGCTGGTTTGTAAAATaGGTGGGATCTGTGTCCTCAAGGCCCATCATGGTAGGTGGTGGT	+
Preference number: 5 (lower is better) Translates to: SDFGRCHVVLCWFVK*VGSVSSRPIMVGGG Trigger: ACCACCACCTACCATGATGGGCCTTGAGGACACAGATCCCACCCATTTTACAAACCAGCACAGTACAACATGGCATCTTCCAAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS GCA 90 bp	TTTCCTGGCAATTTCAGCATCATACCACTCCTGGTCCCTGTGGCTTaGTCGTGCTGGAGTAGAGACAGCTTCTTTTATTCCTCTTGGTTT	+
Preference number: 5 (lower is better) Translates to: FPGNFSIIPLLVPVA*SCWSRDSFFYSSWF Trigger: AAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 90 bp	AATTTCAGCATCATACCACTCCTGGTCCCTGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTTTATTCCTCTTGGTTTCATTCCTCC	+
Preference number: 5 (lower is better) Translates to: NFSIIPLLVPVACSC*SRDSFFYSSWFHSS Trigger: GGAGGAATGAAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2
CDS CCA 90 bp	TGCAATTTCCTGGCAATTTCAGCATCATACCACTCCTGGTCCCTGTaGCTTGCTCGTGCTGGAGTAGAGACAGCTTCTTTTATTCCTCTT	+
Preference number: 5 (lower is better) Translates to: CNFLAISASYHSWSL*LARAGVETASFIPL Trigger: AAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAGGAAATTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 90 bp	TCTTCTTCTTGCAATTTCCTGGCAATTTCAGCATCATACCACTCCTaGTCCCTGTGGCTTGCTCGTGCTGGAGTAGAGACAGCTTCTTTT	+
Preference number: 5 (lower is better) Translates to: SSSCNFLAISASYHS*SLWLARAGVETASF Trigger: AAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 90 bp	AATTTCAGCATCATACCACTCCTGGTCCCTGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTTTATTCCTCTTGGTTTCATTCCTGC	+
Preference number: 5 (lower is better) Translates to: NFSIIPLLVPVACSC*SRDSFFYSSWFHSC Trigger: GCAGGAATGAAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TGCTACATATGTGCCACAGACCAGCCCATCCATGTATGCTCTTTGGTTGGTGGCTTGAGTGGGCTGACTTaGCTTTTAACTTGCATTCAG	+
Preference number: 5 (lower is better) Translates to: CYICATDQPIHVCSLVGGLSGLT*LLTCIQ Trigger: CTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAA...GCCACCAACCAAAGAGCATACATGGATGGGCTGGTCTGTGGCACATATGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	GTCACCAGTCAGATACAGATATGGCTCTACAGCATACAGGCACCGATAGACAGAGTGAGGACTCTGACTTaGGAAGATGCCATGTTGTAC	+
Preference number: 5 (lower is better) Translates to: VTSQIQIWLYSIQAPIDRVRTLT*EDAMLY Trigger: GTACAACATGGCATCTTCCAAAGTCAGAGTCCTCAC...TCTGTCTATCGGTGCCTGTATGCTGTAGAGCCATATCTGTATCTGACTGGTGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS GCA 90 bp	TCTCTTGCAAAAGACGTGCTATGTCCTCATCCTTCTTTTCCTGAATaGGTCGTCTCTCAGCCTCAATGGTTAGCTTCTCCTGGATTTCCT	+
Preference number: 5 (lower is better) Translates to: SLAKDVLCPHPSFPE*VVSQPQWLASPGFP Trigger: AGGAAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGGATGAGGACATAGCACGTCTTTTGCAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 90 bp	TGGGTGGTGTTCTTCCAGATCTTCCAAGTTCTTCTGTTGATGCCTTaGTTTCTCCTTCTGCCTTACAGTCTTCCCATCGTTTTGGAGTCT	+
Preference number: 5 (lower is better) Translates to: WVVFFQIFQVLLLMP*FLLLPYSLPIVLES Trigger: AGACTCCAAAACGATGGGAAGACTGTAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAGAACTTGGAAGATCTGGAAGAACACCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCCTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTC	+
Preference number: 5 (lower is better) Translates to: FETNNCRFLAHHWKDSLLLLELS*GFEVFL Trigger: GAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAG...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	GCCAATGTTCAGATGCTACATTTCTTACACGGCCAAAGTGACCAAAATTACCAACTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTC	+
Preference number: 5 (lower is better) Translates to: ANVQMLHFLHGQSDQNYQLLELS*GFEVFL Trigger: GAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAG...TTGGTAATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CAA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCATGATGCTCAATCTCTaGTTCCTGCAGGCTATGGGC	+
Preference number: 5 (lower is better) Translates to: CAIRSNMCYTKSIFEADPMMLNL*FLQAMG Trigger: GCCCATAGCCTGCAGGAACAAGAGATTGAGCATCAT...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCAACCTGCAGATCATGTaGTACCAGACGGTTCCGCTG	+
Preference number: 5 (lower is better) Translates to: FETNNCRFLAHHWKDSLLNLQIM*YQTVPL Trigger: CAGCGGAACCGTCTGGTACAACATGATCTGCAGGTT...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTATTCTCTGTGGTCACCTaGCCCAAGGTCCCGCCCATA	+
Preference number: 5 (lower is better) Translates to: NMCYTKSIFEADPFLFVLFSVVT*PKVPPI Trigger: TATGGGCGGGACCTTGGGCAAGGTGACCACAGAGAA...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 90 bp	GTAGAGACAGCTTCTTTTATTCCTCTTGGTTTCATTCCTGCAACATaGTGGTGGCGAAGTTCTTTATCTTCTGAGAAGGGAGAAGTCCTG	+
Preference number: 5 (lower is better) Translates to: VETASFIPLGFIPAT*WWRSSLSSEKGEVL Trigger: CAGGACTTCTCCCTTCTCAGAAGATAAAGAACTTCGCCACCACCATGTTGCAGGAATGAAACCAAGAGGAATAAAAGAAGCTGTCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGATGATGCTCAATCTCTaGTTCCTGCAGGCTATGGGC	+
Preference number: 5 (lower is better) Translates to: EVICAIRSPFSRPIPFCLMMLNL*FLQAMG Trigger: GCCCATAGCCTGCAGGAACAAGAGATTGAGCATCAT...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTAAACCTGCAGATCATGTaGTACCAGACGGTTCCGCTG	+
Preference number: 5 (lower is better) Translates to: SNMCYTKSIFEADPFLFVNLQIM*YQTVPL Trigger: CAGCGGAACCGTCTGGTACAACATGATCTGCAGGTT...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTACTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTC	+
Preference number: 5 (lower is better) Translates to: NMCYTKSIFEADPFLFVLLLELS*GFEVFL Trigger: GAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAG...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTC	+
Preference number: 5 (lower is better) Translates to: ICAIRSNMCYTKSIFEADLLELS*GFEVFL Trigger: GAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAG...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TGTTCTCAAAATCAGAGATCAAAATCTGTTGGGAGCAGCCTTCCAGAACCCTCCTTGAGTGGGCTGACTTaGCTTTTAACTTGCATTCAG	+
Preference number: 5 (lower is better) Translates to: CSQNQRSKSVGSSLPEPSLSGLT*LLTCIQ Trigger: CTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAA...GGAGGGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTCTGATTTTGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CAA 90 bp	AAGATATTCCTATTAATGTTACAAGTCACCCAGAGCACAGTGGGCGAGGTTCAACACCCTCTTTTGACTTaGAGTGGGCTGACTTTGCTT	+
Preference number: 5 (lower is better) Translates to: KIFLLMLQVTQSTVGEVQHPLLT*SGLTLL Trigger: AAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTG...TTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100026.10
CDS-3UTR CAA 90 bp	TGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCCTTCATCACCCTCTTTaGACTTTGAGTGGGCTGACT	+
Preference number: 5 (lower is better) Translates to: CAIRSNMCYTKSIFEADPLHHPL*TLSGLT Trigger: AGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAG...GGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTTTTGAGGTCTTCCTCTaGGAGCTGCTTAGCAACCTG	+
Preference number: 5 (lower is better) Translates to: RSNMCYTKSIFEADPFLFFEVFL*ELLSNL Trigger: CAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAA...AAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTCACCCTCTTTTGACTTaGAGTGGGCTGACTTTGCTT	+
Preference number: 5 (lower is better) Translates to: AIRSNMCYTKSIFEADPFHPLLT*SGLTLL Trigger: AAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTG...AAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGCACCCTCTTTTGACTTaGAGTGGGCTGACTTTGCTT	+
Preference number: 5 (lower is better) Translates to: EVICAIRSPFSRPIPFCLHPLLT*SGLTLL Trigger: AAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTG...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TTTGAAACTAACAATTGCAGATTTTTGGCTCACCACTGGAAGGACAGTCTTCTCCTTCATCACCCTCTTTaGACTTTGAGTGGGCTGACT	+
Preference number: 5 (lower is better) Translates to: FETNNCRFLAHHWKDSLLLHHPL*TLSGLT Trigger: AGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAG...GAGAAGACTGTCCTTCCAGTGGTGAGCCAAAAATCTGCAATTGTTAGTTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGGTTTTCTGTGAAGACTaGGGTGAAAGTCTGCCATGG	+
Preference number: 5 (lower is better) Translates to: EVICAIRSPFSRPIPFCLVFCED*GESLPW Trigger: CCATGGCAGACTTTCACCCAAGTCTTCACAGAAAAC...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	TACACTGAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACAACCACATGATGCTCAATCTCTaGTTCCTGCAGGCTATGGGC	+
Preference number: 5 (lower is better) Translates to: YTETESATKQLIVYTHNHMMLNL*FLQAMG Trigger: GCCCATAGCCTGCAGGAACAAGAGATTGAGCATCAT...GTGGTTGTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTCAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	TACACTGAGACTGAATCTGCAACAAAGCAATTAATTGTATACACACACAACCACTTTGAGGTCTTCCTCTaGGAGCTGCTTAGCAACCTG	+
Preference number: 5 (lower is better) Translates to: YTETESATKQLIVYTHNHFEVFL*ELLSNL Trigger: CAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAA...GTGGTTGTGTGTGTATACAATTAATTGCTTTGTTGCAGATTCAGTCTCAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039443.14
CDS-3UTR CAA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTATTTGAGGTCTTCCTCTaGGAGCTGCTTAGCAACCTG	+
Preference number: 5 (lower is better) Translates to: NMCYTKSIFEADPFLFVLFEVFL*ELLSNL Trigger: CAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAA...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATTTTGAGGTCTTCCTCTaGGAGCTGCTTAGCAACCTG	+
Preference number: 5 (lower is better) Translates to: ICAIRSNMCYTKSIFEADFEVFL*ELLSNL Trigger: CAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAA...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTACTTCATCACCCTCTTTaGACTTTGAGTGGGCTGACT	+
Preference number: 5 (lower is better) Translates to: SNMCYTKSIFEADPFLFVLHHPL*TLSGLT Trigger: AGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAG...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTCTTCTGTTGATGCCTaGGTTTCTCCTTCTGCCTTA	+
Preference number: 5 (lower is better) Translates to: EVICAIRSPFSRPIPFCLSSVDA*VSPSAL Trigger: TAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAGA...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	ATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATGTGAGGACTCTGACTTaGGAAGATGCCATGTTGTAC	+
Preference number: 5 (lower is better) Translates to: ICAIRSNMCYTKSIFEADVRTLT*EDAMLY Trigger: GTACAACATGGCATCTTCCAAAGTCAGAGTCCTCAC...ATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGTGAGGACTCTGACTTaGGAAGATGCCATGTTGTAC	+
Preference number: 5 (lower is better) Translates to: VICAIRSNMCYTKSIFEAVRTLT*EDAMLY Trigger: GTACAACATGGCATCTTCCAAAGTCAGAGTCCTCAC...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGCTTCTTTTATTCCTCTaGGTTTCATTCCTCCATCCT	+
Preference number: 5 (lower is better) Translates to: EVICAIRSPFSRPIPFCLLLLFL*VSFLHP Trigger: AGGATGGAGGAATGAAACCAAGAGGAATAAAAGAAG...CAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10
CDS-3UTR CAA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTGAGTGGGCTGACTTaGCTTTTAACTTGCATTCAG	+
Preference number: 5 (lower is better) Translates to: SNMCYTKSIFEADPFLFVLSGLT*LLTCIQ Trigger: CTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAA...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTCCAAGTTCTTCTGTaGATGCCTTGGTTTCTCCTT	+
Preference number: 5 (lower is better) Translates to: SNMCYTKSIFEADPFLFVFQVLL*MPWFLL Trigger: AAGGAGAAACCAAGGCATCAACAGAAGAACTTGGAA...TACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	GTAATATGTGCTATAAGAAGTAATATGTGCTATACGAAGTCCATTTTCGAGGCCTTGAGTGGGCTGACTTaGCTTTTAACTTGCATTCAG	+
Preference number: 5 (lower is better) Translates to: VICAIRSNMCYTKSIFEALSGLT*LLTCIQ Trigger: CTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAA...GGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS-3UTR CAA 90 bp	AATATGTGCTATACGAAGTCCATTTTCGAGGCCGATCCCTTTTTGTTTGTATTACTTCTTTTATTCCTCTaGGTTTCATTCCTCCATCCT	+
Preference number: 5 (lower is better) Translates to: NMCYTKSIFEADPFLFVLLLLFL*VSFLHP Trigger: AGGATGGAGGAATGAAACCAAGAGGAATAAAAGAAG...TAATACAAACAAAAAGGGATCGGCCTCGAAAATGGACTTCGTATAGCACATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10
CDS TCA 72 bp	GTCCTCAAGGCCCATCATGGTAGGTGGTGGTGGTCTTaGTGGCCTGTCAATCTTGGAGCGGTGTGCTTCATC	+
Preference number: 6 (lower is better) Translates to: VLKAHHGRWWWS*WPVNLGAVCFI Trigger: GATGAAGCACACCGCTCCAAGATTGACAGGCCATCAAGACCACCACCACCTACCATGATGGGCCTTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS CAA 90 bp	AGGCCCATCATGGTAGGTGGTGGTGGTCTTGATGGCCTGTCAATCTaGGAGCGGTGTGCTTCATCACCCTCTTTTGACTTTGAGTGGGCT	+
Preference number: 6 (lower is better) Translates to: RPIMVGGGGLDGLSI*ERCASSPSFDFEWA Trigger: AGCCCACTCAAAGTCAAAAGAGGGTGATGAAGCACACCGCTCCAAGATTGACAGGCCATCAAGACCACCACCACCTACCATGATGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS CAA 90 bp	GAAGGGAGAAGTCCTGGGCCTATGTCTCCTTTCTCTGTGGTCACCTaGCCCAAGGTCCCGCCCATATACAATTTCCTTACAGGGAAGTCC	+
Preference number: 6 (lower is better) Translates to: EGRSPGPMSPFSVVT*PKVPPIYNFLTGKS Trigger: GGACTTCCCTGTAAGGAAATTGTATATGGGCGGGACCTTGGGCAAGGTGACCACAGAGAAAGGAGACATAGGCCCAGGACTTCTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 72 bp	AATGCTCAGAAATACCTCCCCGCGGATCTTCGGAAGTaGAGATTTCCAGAGCCTCTCCTGACCAGATCGCTT	+
Preference number: 6 (lower is better) Translates to: NAQKYLPADLRK*RFPEPLLTRSL Trigger: AAGCGATCTGGTCAGGAGAGGCTCTGGAAATCTCCACTTCCGAAGATCCGCGGGGAGGTATTTCTGAGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 72 bp	AAGGGAGAAGTCCTGGGCCTATGTCTCCTTTCTCTGTaGTCACCTTGCCCAAGGTCCCGCCCATATACAATT	+
Preference number: 6 (lower is better) Translates to: KGEVLGLCLLSL*SPCPRSRPYTI Trigger: AATTGTATATGGGCGGGACCTTGGGCAAGGTGACCACAGAGAAAGGAGACATAGGCCCAGGACTTCTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CAA 72 bp	TTGTTCAAGGGCTTTGTAGCGCTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTCTTGGAGCTGCTTAGC	+
Preference number: 6 (lower is better) Translates to: LFKGFVALLELS*GFEVFLLELLS Trigger: GCTAAGCAGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAGCGCTACAAAGCCCTTGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 90 bp	TTTGTAGCGCTTCTGGAGCTGAGCTTGGGCTTTGAGGTCTTCCTCTaGGAGCTGCTTAGCAACCTGCAGATCATGTTGTACCAGACGGTT	+
Preference number: 6 (lower is better) Translates to: FVALLELSLGFEVFL*ELLSNLQIMLYQTV Trigger: AACCGTCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAGCGCTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 90 bp	ACAATCATGTTGTTCAAGGGCTTTGTAGCGCTTCTGGAGCTGAGCTaGGGCTTTGAGGTCTTCCTCTTGGAGCTGCTTAGCAACCTGCAG	+
Preference number: 6 (lower is better) Translates to: TIMLFKGFVALLELS*GFEVFLLELLSNLQ Trigger: CTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAAGCCCAAGCTCAGCTCCAGAAGCGCTACAAAGCCCTTGAACAACATGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS GCA 72 bp	AGCATCATACCACTCCTGGTCCCTGTGGCTTGCTCGTaGTGGAGTAGAGACAGCTTCTTTTATTCCTCTTGG	+
Preference number: 6 (lower is better) Translates to: SIIPLLVPVACS*WSRDSFFYSSW Trigger: CCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 72 bp	CTGGCAATTTCAGCATCATACCACTCCTGGTCCCTGTaGCTTGCTCGTGCTGGAGTAGAGACAGCTTCTTTT	+
Preference number: 6 (lower is better) Translates to: LAISASYHSWSL*LARAGVETASF Trigger: AAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS GCA 72 bp	GAAGTCCTGTTTTCTGTGAAGACTTGGGTGAAAGTCTaGCATGGTGATGAGACTGCTTTTCTGGACTCCGGG	+
Preference number: 6 (lower is better) Translates to: EVLFSVKTWVKV*HGDETAFLDSG Trigger: CCCGGAGTCCAGAAAAGCAGTCTCATCACCATGGCAGACTTTCACCCAAGTCTTCACAGAAAACAGGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CAA 72 bp	TTCCTCTTGGAGCTGCTTAGCAACCTGCAGATCATGTaGTACCAGACGGTTCCGCTGAATGTTGGATGCCAA	+
Preference number: 6 (lower is better) Translates to: FLLELLSNLQIM*YQTVPLNVGCQ Trigger: TTGGCATCCAACATTCAGCGGAACCGTCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 72 bp	ATGGTAGGTGGTGGTGGTCTTGATGGCCTGTCAATCTaGGAGCGGTGTGCTTCATCACCCTCTTTTGACTTT	+
Preference number: 6 (lower is better) Translates to: MVGGGGLDGLSI*ERCASSPSFDF Trigger: AAAGTCAAAAGAGGGTGATGAAGCACACCGCTCCAAGATTGACAGGCCATCAAGACCACCACCACCTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS CAA 72 bp	AGTGTCCAGAACCCAGTTCCCTGTCCCTCCTTGACCTaGACTGGTCTCCATCCTCATGATAGTAGTTATCTC	+
Preference number: 6 (lower is better) Translates to: SVQNPVPCPSLT*TGLHPHDSSYL Trigger: GAGATAACTACTATCATGAGGATGGAGACCAGTCAAGGTCAAGGAGGGACAGGGAACTGGGTTCTGGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CAA 90 bp	TTTGAGGTCTTCCTCTTGGAGCTGCTTAGCAACCTGCAGATCATGTaGTACCAGACGGTTCCGCTGAATGTTGGATGCCAAATGATGCTC	+
Preference number: 6 (lower is better) Translates to: FEVFLLELLSNLQIM*YQTVPLNVGCQMML Trigger: GAGCATCATTTGGCATCCAACATTCAGCGGAACCGTCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 90 bp	CCTTCTGCCTTACAGTCTTCCCATCGTTTTGGAGTCTACAAAACTTaGAGTGTCCAGAACCCAGTTCCCTGTCCCTCCTTGACCTTGACT	+
Preference number: 6 (lower is better) Translates to: PSALQSSHRFGVYKT*SVQNPVPCPSLTLT Trigger: AGTCAAGGTCAAGGAGGGACAGGGAACTGGGTTCTGGACACTCAAAGTTTTGTAGACTCCAAAACGATGGGAAGACTGTAAGGCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS GCA 72 bp	AATTTCAGCATCATACCACTCCTGGTCCCTGTGGCTTaGTCGTGCTGGAGTAGAGACAGCTTCTTTTATTCC	+
Preference number: 6 (lower is better) Translates to: NFSIIPLLVPVA*SCWSRDSFFYS Trigger: GGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS GCA 72 bp	AAGTCGAGCAATTTCCTCATCCTGGGCAACCTGAGCTaGTCTCATGTCCACATGAGTAGCCAAAAGTTCTTC	+
Preference number: 6 (lower is better) Translates to: KSSNFLILGNLS*SHVHMSSQKFF Trigger: GAAGAACTTTTGGCTACTCATGTGGACATGAGAGCAGCTCAGGTTGCCCAGGATGAGGAAATTGCTCGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039443.14 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 72 bp	ATCATACCACTCCTGGTCCCTGTGGCTTGCTCGTGCTaGAGTAGAGACAGCTTCTTTTATTCCTCTTGGTTT	+
Preference number: 6 (lower is better) Translates to: IIPLLVPVACSC*SRDSFFYSSWF Trigger: AAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 90 bp	ATGGGTGGTGTTCTTCCAGATCTTCCAAGTTCTTCTGTTGATGCCTaGGTTTCTCCTTCTGCCTTACAGTCTTCCCATCGTTTTGGAGTC	+
Preference number: 6 (lower is better) Translates to: MGGVLPDLPSSSVDA*VSPSALQSSHRFGV Trigger: GACTCCAAAACGATGGGAAGACTGTAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAGAACTTGGAAGATCTGGAAGAACACCACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS GCA 72 bp	ATCATGTTGTACCAGACGGTTCCGCTGAATGTTGGATaGCAAATGATGCTCAATCTCTTGTTCCTGCAGGCT	+
Preference number: 6 (lower is better) Translates to: IMLYQTVPLNVG*QMMLNLLFLQA Trigger: AGCCTGCAGGAACAAGAGATTGAGCATCATTTGGCATCCAACATTCAGCGGAACCGTCTGGTACAACATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS GCA 72 bp	GAGGACTCTGACTTTGGAAGATGCCATGTTGTACTGTaGTGGTTTGTAAAATGGGTGGGATCTGTGTCCTCA	+
Preference number: 6 (lower is better) Translates to: EDSDFGRCHVVL*WFVKWVGSVSS Trigger: TGAGGACACAGATCCCACCCATTTTACAAACCAGCACAGTACAACATGGCATCTTCCAAAGTCAGAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS CCA 72 bp	CCTTCTTTTCCTGAATGCGTCGTCTCTCAGCCTCAATaGTTAGCTTCTCCTGGATTTCCTGAGCAATTTCAC	+
Preference number: 6 (lower is better) Translates to: PSFPECVVSQPQ*LASPGFPEQFH Trigger: GTGAAATTGCTCAGGAAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CAA 72 bp	TTACAGTCTTCCCATCGTTTTGGAGTCTACAAAACTTaGAGTGTCCAGAACCCAGTTCCCTGTCCCTCCTTG	+
Preference number: 6 (lower is better) Translates to: LQSSHRFGVYKT*SVQNPVPCPSL Trigger: CAAGGAGGGACAGGGAACTGGGTTCTGGACACTCAAAGTTTTGTAGACTCCAAAACGATGGGAAGACTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 72 bp	GGTTTCTCCTTCTGCCTTACAGTCTTCCCATCGTTTTaGAGTCTACAAAACTTTGAGTGTCCAGAACCCAGT	+
Preference number: 6 (lower is better) Translates to: GFSFCLTVFPSF*SLQNFECPEPS Trigger: ACTGGGTTCTGGACACTCAAAGTTTTGTAGACTCCAAAACGATGGGAAGACTGTAAGGCAGAAGGAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CAA 72 bp	TGTCAATCTTGGAGCGGTGTGCTTCATCACCCTCTTTaGACTTTGAGTGGGCTGACTTTGCTTTTAACTTGC	+
Preference number: 6 (lower is better) Translates to: CQSWSGVLHHPL*TLSGLTLLLTC Trigger: GCAAGTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAGCACACCGCTCCAAGATTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000239351.2
CDS CAA 72 bp	GTTCTTCCAGATCTTCCAAGTTCTTCTGTTGATGCCTaGGTTTCTCCTTCTGCCTTACAGTCTTCCCATCGT	+
Preference number: 6 (lower is better) Translates to: VLPDLPSSSVDA*VSPSALQSSHR Trigger: ACGATGGGAAGACTGTAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAGAACTTGGAAGATCTGGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS TCA 72 bp	CTCTCAGCCTCAATGGTTAGCTTCTCCTGGATTTCCTaGGCAATTTCACAATCATGTTGTTCAAGGGCTTTG	+
Preference number: 6 (lower is better) Translates to: LSASMVSFSWIS*AISQSCCSRAL Trigger: CAAAGCCCTTGAACAACATGATTGTGAAATTGCTCAGGAAATCCAGGAGAAGCTAACCATTGAGGCTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS CCA 72 bp	TTCTTCCAGATCTTCCAAGTTCTTCTGTTGATGCCTTaGTTTCTCCTTCTGCCTTACAGTCTTCCCATCGTT	+
Preference number: 6 (lower is better) Translates to: FFQIFQVLLLMP*FLLLPYSLPIV Trigger: AACGATGGGAAGACTGTAAGGCAGAAGGAGAAACCAAGGCATCAACAGAAGAACTTGGAAGATCTGGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 72 bp	GAGCAATTTCCAAAAGTTCTTCTTCTTGCAATTTCCTaGCAATTTCAGCATCATACCACTCCTGGTCCCTGT	+
Preference number: 6 (lower is better) Translates to: EQFPKVLLLAIS*QFQHHTTPGPC Trigger: ACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAGAAGAACTTTTGGAAATTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096127.11
CDS CCA 72 bp	TTTATTCCTCTTGGTTTCATTCCTGCAACATGGTGGTaGCGAAGTTCTTTATCTTCTGAGAAGGGAGAAGTC	+
Preference number: 6 (lower is better) Translates to: FIPLGFIPATWW*RSSLSSEKGEV Trigger: GACTTCTCCCTTCTCAGAAGATAAAGAACTTCGCCACCACCATGTTGCAGGAATGAAACCAAGAGGAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CCA 72 bp	GCTTCTTTTATTCCTCTTGGTTTCATTCCTGCAACATaGTGGTGGCGAAGTTCTTTATCTTCTGAGAAGGGA	+
Preference number: 6 (lower is better) Translates to: ASFIPLGFIPAT*WWRSSLSSEKG Trigger: TCCCTTCTCAGAAGATAAAGAACTTCGCCACCACCATGTTGCAGGAATGAAACCAAGAGGAATAAAAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239351.2
CDS CAA 72 bp	CTTCATCACCCTCTTTTGACTTTGAGTGGGCTGACTTaGCTTTTAACTTGCATTCAGGGTCATGTTTCCTTT	+
Preference number: 6 (lower is better) Translates to: LHHPLLTLSGLT*LLTCIQGHVSF Trigger: AAAGGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2
CDS TCA 72 bp	CTTGCATTCAGGGTCATGTTTCCTTTTGTCCAAAGATaGCTTTTCTCGCTCTTTGGCTTTCTTGTAAGCTTT	+
Preference number: 6 (lower is better) Translates to: LAFRVMFPFVQR*LFSLFGFLVSF Trigger: AAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGGAAACATGACCCTGAATGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039443.14 ENSMUST00000096127.11 ENSMUST00000100026.10 ENSMUST00000143823.2 ENSMUST00000239351.2

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