Pregenerated sensors for CCDC47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078622Ensembl transcript IDs: ENSMUST00000002043.10, ENSMUST00000106865.8, ENSMUST00000125383.8, ENSMUST00000137915.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGTGAGGCCGTTGAGGGTGTGGCTTTGAGATATCAGACCGCCTaGCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GSEAVEGVALRYQTA*LSCLSTPWPRGSKQ Trigger: CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACACCCTCAACGGCCTCACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR GCA 90 bp | CAAACCGGCCTTGTGGACGATATAAAAGCAGGCGTGGAAGCAAAGTaGACGCCTAAGACAGAGATCAGCTCCTCCATGAACACCTACCAG | + |
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Preference number: 1 (lower is better) Translates to: QTGLVDDIKAGVEAK*TPKTEISSSMNTYQ Trigger: CTGGTAGGTGTTCATGGAGGAGCTGATCTCTGTCTTAGGCGTGCACTTTGCTTCCACGCCTGCTTTTATATCGTCCACAAGGCCGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 90 bp | AGTGATGGAGAGCTGATTAACACTGTAGCTAAAGTGGGCTGGGTGTaGCAGCACACACATGCAGGTGATACCAGCAGATCCGAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SDGELINTVAKVGWV*QHTHAGDTSRSEAK Trigger: CTTTGCCTCGGATCTGCTGGTATCACCTGCATGTGTGTGCTGTCACACCCAGCCCACTTTAGCTACAGTGTTAATCAGCTCTCCATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 90 bp | GGGGAAGCAAGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTaGAGCTCATCTCAGCTGTCCTGTCACAGTGATGGAGAGCTGATT | + |
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Preference number: 1 (lower is better) Translates to: GEASRCALPKPSFPT*SSSQLSCHSDGELI Trigger: AATCAGCTCTCCATCACTGTGACAGGACAGCTGAGATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCTTGCTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 90 bp | AAATTAAGACAGGTAATGGTGGCGCACACCTTTAATTCCAGCACTTaGGAAGCAGAAGCAGGTGTATCTCTGAGTTCAAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KLRQVMVAHTFNSST*EAEAGVSLSSRPAW Trigger: CCAGGCTGGCCTTGAACTCAGAGATACACCTGCTTCTGCTTCCCAAGTGCTGGAATTAAAGGTGTGCGCCACCATTACCTGTCTTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 90 bp | ACACCTTTAATTCCAGCACTTGGGAAGCAGAAGCAGGTGTATCTCTaGGTTCAAGGCCAGCCTGGTCTACAGCTCAAAACTCTGTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TPLIPALGKQKQVYL*VQGQPGLQLKTLSQ Trigger: TTGAGACAGAGTTTTGAGCTGTAGACCAGGCTGGCCTTGAACTCAGAGATACACCTGCTTCTGCTTCCCAAGTGCTGGAATTAAAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 90 bp | GACAAGGAAGAGGGAAATGGTATAATTGTAATCTCGAAACAGGGATaGGGATTTAGCTCAGTGGTAGAGCGCATGCCTAGCAAGCACAAG | + |
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Preference number: 1 (lower is better) Translates to: DKEEGNGIIVISKQG*GFSSVVERMPSKHK Trigger: CTTGTGCTTGCTAGGCATGCGCTCTACCACTGAGCTAAATCCCCATCCCTGTTTCGAGATTACAATTATACCATTTCCCTCTTCCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR GCA 90 bp | AATACTGCCATAGCACCACCCACACACAAACCATACGCTGTACTATaGTCTAAGTCTCTGAATTTATCACCACATAGTGTTCTACGTTCC | + |
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Preference number: 1 (lower is better) Translates to: NTAIAPPTHKPYAVL*SKSLNLSPHSVLRS Trigger: GGAACGTAGAACACTATGTGGTGATAAATTCAGAGACTTAGAGCATAGTACAGCGTATGGTTTGTGTGTGGGTGGTGCTATGGCAGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 90 bp | AGATGGATTCTTCCTAGTGTGACAGTAAGCAACATTCTCCTCTCTTaGTCCTCTGATTCTGTACAGAACAAGATGTCTTACCCAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RWILPSVTVSNILLS*SSDSVQNKMSYPRR Trigger: TCTCCTTGGGTAAGACATCTTGTTCTGTACAGAATCAGAGGACCAAGAGAGGAGAATGTTGCTTACTGTCACACTAGGAAGAATCCATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 90 bp | AGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATaGGAGGTTTGGAAGGGAGGACAAGGAAGAGGGAAATGGTATAAT | + |
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Preference number: 1 (lower is better) Translates to: RSPKFERELWKGTNI*EVWKGGQGRGKWYN Trigger: ATTATACCATTTCCCTCTTCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR CCA 90 bp | TCACTACAACAAAGAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTaGAAAGGAACTAATATATGGGAGGTTTGGAAGGGAGGACAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SLQQRKRSPKFEREL*KGTNIWEVWKGGQG Trigger: TCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTCTTTGTTGTAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCAAGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTGAAGCTCATCCAGAGCCCAGCCACCTaGCTGCTGCTGAGCGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSKQVCSTQTIFSYLKLIQSPAT*LLLSGG Trigger: CCCTCCGCTCAGCAGCAGTCAGGTGGCTGGGCTCTG...GATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCTTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CAA 90 bp | GTGATGGAAACCAAAGAAGGAAGTGAGGCCGTTGAGGGTGTGGCTTaGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VMETKEGSEAVEGVA*RYQTACLSCLSTPW Trigger: CCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACACCCTCAACGGCCTCACTTCCTTCTTTGGTTTCCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTTATGCACAGAGAGGAACCTCTCCCTACCATCGCTTCCGCCTCATGAGTCACTCGTGACTGTTAGGTaGAGACTCCTGCTTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CLCTERNLSLPSLPPHESLVTVR*RLLLFL Trigger: CAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAG...TGACTCATGAGGCGGAAGCGATGGTAGGGAGAGGTTCCTCTCTGTGCATAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | ATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCCTTGTCATGCATTCTTaGTCAAGAAAAATAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: IRPPASPVCQLPGHGEASLVMHS*SRKIST Trigger: TGTGCTTATTTTTCTTGAGCAAGAATGCATGACAAG...GCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCTTTGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCTCTCAACAAGCCAAATaGTTATGCACAGAGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CGFEISDRLPLLSVNSLASQQAK*LCTERN Trigger: GTTCCTCTCTGTGCATAAGCATTTGGCTTGTTGAGA...GGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCTTTGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCGCAACTCACTGTTACTaGATCAGAACACAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CGFEISDRLPLLSVNSLAATHCY*IRTQKA Trigger: TGCTTTCTGTGTTCTGATGCAGTAACAGTGAGTTGC...GGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCACCTGTGGGCCACAGTaGAGTGGTATGTCAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSWRDDLEIKSPDSYVATCGPQ*SGMSVS Trigger: GGACACTGACATACCACTGCACTGTGGCCCACAGGT...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCAAGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTGAAGCTCATCCCACCCCAGCAAAAATaGCCTGGTACAAGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: GSKQVCSTQTIFSYLKLIPPQQK*PGTSKD Trigger: GTCTTTGCTTGTACCAGGTCATTTTTGCTGGGGTGG...GATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCTTGCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTTCACCGCAACTCACTGTTACTGCATCAGAACACAGAAAGCATCAACAAGCGGAGGGAGCTAGGTaGAGCACTTCACCTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QFSPQLTVTASEHRKHQQAEGAR*STSPCH Trigger: ATGACAAGGTGAAGTGCTTCACCTAGCTCCCTCCGC...TTGTTGATGCTTTCTGTGTTCTGATGCAGTAACAGTGAGTTGCGGTGAAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCCAAGCCAAATGCTTATaGACAGAGAGGAACCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSWRDDLEIKSPDSYVAQAKCL*TERNLS Trigger: GGAGAGGTTCCTCTCTGTGCATAAGCATTTGGCTTG...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCAAGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTGAAGCTCATCCATAGTATCAGGCAATaGGAAACTGCTCCTGTACTA | + |
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Preference number: 2 (lower is better) Translates to: GSKQVCSTQTIFSYLKLIHSIRQ*ETAPVL Trigger: TAGTACAGGAGCAGTTTCTCATTGCCTGATACTATG...GATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCTTGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CCA 90 bp | TGTATTTATATAGTTAAGGTATGCAAGAGCATGCACACGCGCACGCGCACGCACATCTCGAAACAGGGATaGGGATTTAGCTCAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CIYIVKVCKSMHTRTRTHISKQG*GFSSVV Trigger: TACCACTGAGCTAAATCCCCATCCCTGTTTCGAGAT...GTGCGTGCGCGTGCGCGTGTGCATGCTCTTGCATACCTTAACTATATAAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGCCATCTTTTCCTACCTaGAGCTCATCTCAGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQPSFPT*SSSQLS Trigger: GGACAGCTGAGATGAGCTTCAGGTAGGAAAAGATGG...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGACAGACGAGAACAAGAGAATAAAGTAAAACTGCACCATTGGATAGTAGCCTGCAGACATACTTaGAGGCAGAATGCTGTATAC | + |
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Preference number: 2 (lower is better) Translates to: PLDRREQENKVKLHHWIVACRHT*RQNAVY Trigger: GTATACAGCATTCTGCCTGCAAGTATGTCTGCAGGC...TACTATCCAATGGTGCAGTTTTACTTTATTCTCTTGTTCTCGTCTGTCCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CAA 90 bp | CACACACACACACGTCACTACAACAAAGAAAAAGAAGCCCTAAGTTaGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: HTHTRHYNKEKEALS*KESCGKELIYGRFG Trigger: TCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTCTTTGTTGTAGTGACGTGTGTGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTGGACAGACGAGAACAAGAGAATAAAGTAAAACTGCACCATTGGATAGTACTGGAAGGAAATAACTaGAAGAGCCCTTTCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: PLDRREQENKVKLHHWIVLEGNN*KSPFIV Trigger: TACAATGAAAGGGCTCTTTCAGTTATTTCCTTCCAG...TACTATCCAATGGTGCAGTTTTACTTTATTCTCTTGTTCTCGTCTGTCCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CAA 90 bp | CTGTACAGAACAAGATGTCTTACCCAAGGAGAAGACTATAATGGTTaGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGC | + |
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Preference number: 2 (lower is better) Translates to: LYRTRCLTQGEDYNG*DLKCHQSSTVKPYS Trigger: GCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATTATAGTCTTCTCCTTGGGTAAGACATCTTGTTCTGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR TCA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGTATGCTCTAAGTCTCTaGATTTATCACCACATAGTG | + |
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Preference number: 2 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQYALSL*IYHHIV Trigger: CACTATGTGGTGATAAATTCAGAGACTTAGAGCATA...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGACAGACGAGAACAAGAGAATAAAGTAAAACTGCACCATTGGATAGTAAAAGATTTTGGAAGATaGATTCTTCCTAGTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: PLDRREQENKVKLHHWIVKDFGR*ILPSVT Trigger: TGTCACACTAGGAAGAATCCATCTTCCAAAATCTTT...TACTATCCAATGGTGCAGTTTTACTTTATTCTCTTGTTCTCGTCTGTCCAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACGTCACTACAACAAAGAAAAAGAAGCCCTAAGTTTGAAAGAGCAAGGAAGAGGGAAATaGTATAATTGTAATCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: HTHTRHYNKEKEALSLKEQGRGK*YNCNLE Trigger: TTCGAGATTACAATTATACCATTTCCCTCTTCCTTG...CTCTTTCAAACTTAGGGCTTCTTTTTCTTTGTTGTAGTGACGTGTGTGTGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR CCA 72 bp | TATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTaGCCACGGGGAAGCAAGCAGGTGTGCTCTACCCAA | + |
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Preference number: 3 (lower is better) Translates to: YQTACLSCLSTP*PRGSKQVCSTQ Trigger: TTGGGTAGAGCACACCTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CAA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGAAAATCATCCTGAGTTaGACTGTGGCCAGCTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: QTACLSCLSTPWPRGSKQKIILS*TVASLG Trigger: GCCCAAGCTGGCCACAGTCAAACTCAGGATGATTTT...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | GCAGATCCGAGGCAAAGGTCAGCCTGGCCTAGAAAGTaGGTTCTAGGCCAGTCAGCCCTACACAGAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: ADPRQRSAWPRK*VLGQSALHRET Trigger: GGTCTCTCTGTGTAGGGCTGACTGGCCTAGAACTCACTTTCTAGGCCAGGCTGACCTTTGCCTCGGATCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR GCA 72 bp | AGATCTCTCAGTCAGCAGAGACTCGTGACTGTTAGGTaGAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGA | + |
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Preference number: 3 (lower is better) Translates to: RSLSQQRLVTVR*RLLLFLSPVDG Trigger: TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACTGAGAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
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| 3UTR GCA 72 bp | GGAGATGGCTCAGCAGTTAAGAGCACTGACTACTCTTaGAAAGGTGCTGGGTTCAGTTCCCAGCACCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GDGSAVKSTDYS*KGAGFSSQHPQ Trigger: CTGAGGGTGCTGGGAACTGAACCCAGCACCTTTGCAAGAGTAGTCAGTGCTCTTAACTGCTGAGCCATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | CAAAGTGCACGCCTAAGACAGAGATCAGCTCCTCCATaGACACCTACCAGGCTGCAGCAAGCAAGCAAACCA | + |
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Preference number: 3 (lower is better) Translates to: QSARLRQRSAPP*TPTRLQQASKP Trigger: TGGTTTGCTTGCTTGCTGCAGCCTGGTAGGTGTTCATGGAGGAGCTGATCTCTGTCTTAGGCGTGCACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | TGCAGTGGTATGTCAGTGTCCCAGCACTCAGCAGGCTaGGGAGAGAAAATCATCCTGAGTTTGACTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: CSGMSVSQHSAG*GEKIILSLTVA Trigger: GGCCACAGTCAAACTCAGGATGATTTTCTCTCCTCAGCCTGCTGAGTGCTGGGACACTGACATACCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | GAGCTGATTAACACTGTAGCTAAAGTGGGCTGGGTGTaGCAGCACACACATGCAGGTGATACCAGCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: ELINTVAKVGWV*QHTHAGDTSRS Trigger: GGATCTGCTGGTATCACCTGCATGTGTGTGCTGTCACACCCAGCCCACTTTAGCTACAGTGTTAATCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | ATTCCAGCACTTGGGAAGCAGAAGCAGGTGTATCTCTaGGTTCAAGGCCAGCCTGGTCTACAGCTCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: IPALGKQKQVYL*VQGQPGLQLKT Trigger: AGTTTTGAGCTGTAGACCAGGCTGGCCTTGAACTCAGAGATACACCTGCTTCTGCTTCCCAAGTGCTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR TCA 72 bp | AGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTaGAGCTCATCTCAGCTGTCCTGTCACAGTGATGGA | + |
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Preference number: 3 (lower is better) Translates to: SRCALPKPSFPT*SSSQLSCHSDG Trigger: TCCATCACTGTGACAGGACAGCTGAGATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR GCA 72 bp | CTTGTGGACGATATAAAAGCAGGCGTGGAAGCAAAGTaGACGCCTAAGACAGAGATCAGCTCCTCCATGAAC | + |
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Preference number: 3 (lower is better) Translates to: LVDDIKAGVEAK*TPKTEISSSMN Trigger: GTTCATGGAGGAGCTGATCTCTGTCTTAGGCGTGCACTTTGCTTCCACGCCTGCTTTTATATCGTCCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CAA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCGGCCTGCAGACATACTaGCAGGCAGAATGCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: QGSWRDDLEIKSPDSYVAGLQTY*QAECCI Trigger: TATACAGCATTCTGCCTGCAAGTATGTCTGCAGGCC...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 72 bp | GAGATTAAGAGCCCTGACTCCTATGTTGCCTTCTTCTaGCCTGCAGACATACTTGCAGGCAGAATGCTGTAT | + |
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Preference number: 3 (lower is better) Translates to: EIKSPDSYVAFF*PADILAGRMLY Trigger: ATACAGCATTCTGCCTGCAAGTATGTCTGCAGGCCAGAAGAAGGCAACATAGGAGTCAGGGCTCTTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR-3UTR CAA 90 bp | TGCTTATGCACAGAGAGGAACCTCTCCCTACCATCGCTTCCGCCTCATGAGTCACCTTGTCATGCATTCTaGCTCAAGAAAAATAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: CLCTERNLSLPSLPPHESPCHAF*LKKNKH Trigger: GTGCTTATTTTTCTTGAGCAAGAATGCATGACAAGG...TGACTCATGAGGCGGAAGCGATGGTAGGGAGAGGTTCCTCTCTGTGCATAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR CCA 72 bp | GAGGGAAATGGTATAATTGTAATCTCGAAACAGGGATaGGGATTTAGCTCAGTGGTAGAGCGCATGCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: EGNGIIVISKQG*GFSSVVERMPS Trigger: GCTAGGCATGCGCTCTACCACTGAGCTAAATCCCCATCCCTGTTTCGAGATTACAATTATACCATTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR TCA 72 bp | GCACTCACAGTGTCATTAGCTCATAGTATCAGGCAATaGGAAACTGCTCCTGTACTACCTACATCTAGAATC | + |
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Preference number: 3 (lower is better) Translates to: ALTVSLAHSIRQ*ETAPVLPTSRI Trigger: GATTCTAGATGTAGGTAGTACAGGAGCAGTTTCTCATTGCCTGATACTATGAGCTAATGACACTGTGAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| 3UTR GCA 72 bp | GTCCTAGCAACTGGTTTTGTTGACAGTCTTTGTCTATaGTTCAGGGATAATTTTGGCTTGCTAGTGATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLATGFVDSLCL*FRDNFGLLVIQ Trigger: CTGGATCACTAGCAAGCCAAAATTATCCCTGAAGCATAGACAAAGACTGTCAACAAAACCAGTTGCTAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| 3UTR GCA 72 bp | ACACATTTATTTATTCACCTACTGTGTACATGTGTGTaGACACACCATGGCCCACATGTGGTGGTCAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: THLFIHLLCTCV*THHGPHVVVKQ Trigger: TTGTTTGACCACCACATGTGGGCCATGGTGTGTGCACACACATGTACACAGTAGGTGAATAAATAAATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| 3UTR CCA 72 bp | AAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATaGGAGGTTTGGAAGGGAGGACAAGGAAGAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KFERELWKGTNI*EVWKGGQGRGK Trigger: TTTCCCTCTTCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| 3UTR CCA 72 bp | CAAAGAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTaGAAAGGAACTAATATATGGGAGGTTTGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRKRSPKFEREL*KGTNIWEVWKG Trigger: TCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| 3UTR GCA 72 bp | CTTAGGCACTGTACACACATGGTACATAGACATACATaGAGGCAAAACACACATACACATAAAGAAAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LRHCTHMVHRHT*RQNTHTHKEKV Trigger: AACTTTTTCTTTATGTGTATGTGTGTTTTGCCTGCATGTATGTCTATGTACCATGTGTGTACAGTGCCTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGCAAGGGGTCCTCCTCGTTCATaGTCCGCTCCTTCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRLLLFLSPVDGELTAARGPPRS*SAPSQL Trigger: GAGCTGAGAAGGAGCGGATCATGAACGAGGAGGACC...CCTTGCTGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR GCA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGTCCCTCCTGGGTATCTaGATCTTCGAAATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTACLSCLSTPWPRGSKQSLLGI*IFEITF Trigger: GAAGGTGATTTCGAAGATGCAGATACCCAGGAGGGA...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGACTCACGCCGAGACTGTaGAGCCTCCTGTCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGLTPRL*SLLSLH Trigger: GTGCAGAGACAGGAGGCTGCACAGTCTCGGCGTGAG...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGGGCAGCTTTAAAGGCTaGCCTTCCTCTTGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: QTACLSCLSTPWPRGSKQGSFKG*PSSCII Trigger: GATTATGCAAGAGGAAGGCCAGCCTTTAAAGCTGCC...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGATGTGCTCATTCTCCTaGTTCAACTTCCCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTACLSCLSTPWPRGSKQMCSFS*FNFPVL Trigger: AAGCACAGGGAAGTTGAATCAGGAGAATGAGCACAT...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGCAAGGGCAGCCTCCTGTCTCTaGACATGTGTCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLLLFLSPVDGELTAARAASCL*TCVSFR Trigger: TCTGAAGCTGACACATGTGCAGAGACAGGAGGCTGC...CCTTGCTGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTTTGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCCTTCCAACTCCACGGTaGCCTCGTCCTCGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGFEISDRLPLLSVNSLALPTPR*PRPRHL Trigger: AAGATGACGAGGACGAGGCCACCGTGGAGTTGGAAG...GGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGTGGCAGTCCATACTTTaGTCCAGACTTTGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: QTACLSCLSTPWPRGSKQWQSIL*SRLWFI Trigger: GATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCA...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGCAGCCTCCTGTCTCTaGACATGTGTCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRCRLLLFLSPVDGELTAAASCL*TCVSFR Trigger: TCTGAAGCTGACACATGTGCAGAGACAGGAGGCTGC...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR GCA 90 bp | TATATAGTTAAGGTATGCAAGAGCATGCACACGCGCACGCGCACGCACGCGCGCGCAGCCTCCTGTCTCTaGACATGTGTCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YIVKVCKSMHTRTRTHARAASCL*TCVSFR Trigger: TCTGAAGCTGACACATGTGCAGAGACAGGAGGCTGC...GCGCGCGTGCGTGCGCGTGCGCGTGTGCATGCTCTTGCATACCTTAACTATATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCACTTTTATTTGCACTTaGTCACTCACTGGCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IRPPASPVCQLPGHGEASTFICT*SLTGLI Trigger: GATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGT...GCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGGCTGGCCTTCCTCTTaGATAATCTTTGGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRCRLLLFLSPVDGELTAGWPSS*IIFGPE Trigger: CTCTGGTCCAAAGATTATGCAAGAGGAAGGCCAGCC...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| 3UTR CAA 72 bp | ACCAAAGAAGGAAGTGAGGCCGTTGAGGGTGTGGCTTaGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKEGSEAVEGVA*RYQTACLSCLS Trigger: TGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACACCCTCAACGGCCTCACTTCCTTCTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAACAGTAGCGTCCTCTTaGTGTCAGGCAGCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRCRLLLFLSPVDGELTATVASS*CQAALK Trigger: CTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGT...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGCAAGGACTGTTCTGGAGGTGTaGAGGAACATCAACAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRLLLFLSPVDGELTAARTVLEV*RNINNC Trigger: ACAATTGTTGATGTTCCTGCACACCTCCAGAACAGT...CCTTGCTGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTTTGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCAACTCACTCAGATCCTaGATCTCTTTCTGTAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CGFEISDRLPLLSVNSLANSLRS*ISFCSR Trigger: GCGACTACAGAAAGAGATGCAGGATCTGAGTGAGTT...GGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGGAGGACAAGGACTCACGCCGAGACTGTaGAGCCTCCTGTCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RELWKGTNIWEVWKGGQGLTPRL*SLLSLH Trigger: GTGCAGAGACAGGAGGCTGCACAGTCTCGGCGTGAG...TCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR TCA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGATGGGTATGTGTTACCTaGGCCAGGCACATTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGWVCVT*ARHIKC Trigger: ACATTTAATGTGCCTGGCTCAGGTAACACATACCCA...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR TCA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGTTTCCCTTCTCTGTTaGGTCGGAACTTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGVSLLC*VGTFWL Trigger: AAGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAAC...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGCACAGAGAGGAACCTCTCCCTACCATCGCTTCCGCCTCATGAGTCACCATTTCTGACAGAATaGCCAAAGAGTCTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCTERNLSLPSLPPHESPFLTE*PKSLAV Trigger: GACTGCCAGACTCTTTGGCCATTCTGTCAGAAATGG...TGACTCATGAGGCGGAAGCGATGGTAGGGAGAGGTTCCTCTCTGTGCATAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGGCAGCTTTAAAGGCTaGCCTTCCTCTTGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPGSFKG*PSSCII Trigger: GATTATGCAAGAGGAAGGCCAGCCTTTAAAGCTGCC...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGTGGGTATGTGTTACCTaGGCCAGGCACATTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPWVCVT*ARHIKC Trigger: ACATTTAATGTGCCTGGCTCAGGTAACACATACCCA...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCAGTTAGAAGAGGTATCTaGTTTGTCTTCATAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRCRLLLFLSPVDGELTAVRRGI*FVFITL Trigger: GAGGGTTATGAAGACAAACCAGATACCTCTTCTAAC...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGTTAAGGAACCTCAGCTaGATAAGCATGCCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPLRNLS*ISMPSQ Trigger: CTGTGAAGGCATGCTTATCCAGCTGAGGTTCCTTAA...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTTTCACCGCAACTCACTGTTACTGCATCAGAACACAGAAAGCATCAACAAGGTCCTCCTCGTTCATaGTCCGCTCCTTCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QFSPQLTVTASEHRKHQQGPPRS*SAPSQL Trigger: GAGCTGAGAAGGAGCGGATCATGAACGAGGAGGACC...TTGTTGATGCTTTCTGTGTTCTGATGCAGTAACAGTGAGTTGCGGTGAAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCGGCTGGCCTTCCTCTTaGATAATCTTTGGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSWRDDLEIKSPDSYVAGWPSS*IIFGPE Trigger: CTCTGGTCCAAAGATTATGCAAGAGGAAGGCCAGCC...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCGAGTTAAACCAGGCCTaGGCAAGTCGGCTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSWRDDLEIKSPDSYVAELNQA*ASRLFL Trigger: TAAAAACAGCCGACTTGCTCAGGCCTGGTTTAACTC...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | TGTATTTATATAGTTAAGGTATGCAAGAGCATGCACACGCGCACGCGCACGCACCCATCATTCCCTCTGTaGCTTCTCCCATTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CIYIVKVCKSMHTRTRTHPSFPL*LLPFLT Trigger: TGTCAGAAATGGGAGAAGTCACAGAGGGAATGATGG...GTGCGTGCGCGTGCGCGTGTGCATGCTCTTGCATACCTTAACTATATAAATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGGGTCCTCCTCGTTCATaGTCCGCTCCTTCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKESCGKELIYGRFGRGPPRS*SAPSQL Trigger: GAGCTGAGAAGGAGCGGATCATGAACGAGGAGGACC...CCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR GCA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAACTTTGGTTTATCACTaGAAAACTCACTCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGTLVYH*KTHSDP Trigger: AGGATCTGAGTGAGTTTTGCAGTGATAAACCAAAGT...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGCTCACGCCGAGACTGTaGAGCCTCCTGTCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQLTPRL*SLLSLH Trigger: GTGCAGAGACAGGAGGCTGCACAGTCTCGGCGTGAG...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGAGATCTCAACAAGCCAAATGCTTATGCACAGAGAGGAACCTCTCCCCTCTCCCAACTGTTCTaGAGGTGTGCAGGAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: KCRDLNKPNAYAQRGTSPLSQLF*RCAGTS Trigger: TGATGTTCCTGCACACCTCCAGAACAGTTGGGAGAG...GGGAGAGGTTCCTCTCTGTGCATAAGCATTTGGCTTGTTGAGATCTCTGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGACCAGAGAACTGGTCTaGAAAATGAACAGATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPTRELV*KMNRFN Trigger: ATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGT...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAGTTGGAGAGATGACTTAGAGATTAAGAGCCCTGACTCCTATGTTGCCCGAAATCATCAAACTTaGCTTCCGAGACACTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGSWRDDLEIKSPDSYVARNHQT*LPRHSQ Trigger: TTGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCG...GGCAACATAGGAGTCAGGGCTCTTAATCTCTAAGTCATCTCTCCAACTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGGAGGACAAGGAAGAGAACTCACTCAGATCCTaGATCTCTTTCTGTAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCGKELIYGRFGREDKEENSLRS*ISFCSR Trigger: GCGACTACAGAAAGAGATGCAGGATCTGAGTGAGTT...CTCTTCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGCACTTGATCACTCACTaGCCTCATCATCCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQHLITH*PHHPGQ Trigger: CTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTG...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAAGCAGGTGTGCTCTACCCAAACCATCTTTTCCTACCTGAAGCTCATCCTTTGCTCCAGACTTTaGTTTATCACTGCAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKQVCSTQTIFSYLKLILCSRL*FITAKL Trigger: GAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAG...GATGAGCTTCAGGTAGGAAAAGATGGTTTGGGTAGAGCACACCTGCTTGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | ATAGACTGTATTTATATAGTTAAGGTATGCAAGAGCATGCACACGCGCACGCGCGGCAGCTTTAAAGGCTaGCCTTCCTCTTGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: IDCIYIVKVCKSMHTRTRGSFKG*PSSCII Trigger: GATTATGCAAGAGGAAGGCCAGCCTTTAAAGCTGCC...GCGCGTGCGCGTGTGCATGCTCTTGCATACCTTAACTATATAAATACAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTTCACCGCAACTCACTGTTACTGCATCAGAACACAGAAAGCATCAACAACCATCATTCCCTCTGTaGCTTCTCCCATTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QFSPQLTVTASEHRKHQQPSFPL*LLPFLT Trigger: TGTCAGAAATGGGAGAAGTCACAGAGGGAATGATGG...TTGTTGATGCTTTCTGTGTTCTGATGCAGTAACAGTGAGTTGCGGTGAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGAACTAATATATGGGAGGTTTGGAAGGGAGGACAAGGAAGAGGGAAATGTTTCCCTTCTCTGTTaGGTCGGAACTTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKELIYGRFGREDKEEGNVSLLC*VGTFWL Trigger: AAGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAAC...ATTTCCCTCTTCCTTGTCCTCCCTTCCAAACCTCCCATATATTAGTTCCTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTTCACCGCAACTCACTGTTACTGCATCAGAACACAGAAAGCATCAACAAGTTTCCCTTCTCTGTTaGGTCGGAACTTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFSPQLTVTASEHRKHQQVSLLC*VGTFWL Trigger: AAGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAAC...TTGTTGATGCTTTCTGTGTTCTGATGCAGTAACAGTGAGTTGCGGTGAAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGGGCTGGCCTTCCTCTTaGATAATCTTTGGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKEALSLKESCGKELIYGGWPSS*IIFGPE Trigger: CTCTGGTCCAAAGATTATGCAAGAGGAAGGCCAGCC...CCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGTGGGTATGTGTTACCTaGGCCAGGCACATTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKESCGKELIYGRFGRWVCVT*ARHIKC Trigger: ACATTTAATGTGCCTGGCTCAGGTAACACATACCCA...CCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGCCATTTCTGACAGAATaGCCAAAGAGTCTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKEALSLKESCGKELIYGPFLTE*PKSLAV Trigger: GACTGCCAGACTCTTTGGCCATTCTGTCAGAAATGG...CCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGACAGTAGCGTCCTCTTaGTGTCAGGCAGCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKEALSLKESCGKELIYGTVASS*CQAALK Trigger: CTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGT...CCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGTGGCAGTCCATACTTTaGTCCAGACTTTGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKESCGKELIYGRFGRWQSIL*SRLWFI Trigger: GATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCA...CCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGTCTGTATCTCCCTCCTaGGTATCTGCATCTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQSVSPS*VSASSK Trigger: TTTCGAAGATGCAGATACCCAGGAGGGAGATACAGA...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | CCACTGGACAGACGAGAACAAGAGAATAAAGTAAAACTGCACCATTGGATAGTAACCAGAGAACTGGTCTaGAAAATGAACAGATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLDRREQENKVKLHHWIVTRELV*KMNRFN Trigger: ATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGT...TACTATCCAATGGTGCAGTTTTACTTTATTCTCTTGTTCTCGTCTGTCCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACGTCACTACAACAAAGAAAAAGAAGCCCTAAGTTTGAAACTTTGCTCCAGACTTTaGTTTATCACTGCAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTRHYNKEKEALSLKLCSRL*FITAKL Trigger: GAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAG...TTTCAAACTTAGGGCTTCTTTTTCTTTGTTGTAGTGACGTGTGTGTGTGTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| 3UTR CAA 72 bp | ACTCCTATGTTGCCTTCTTCTGGCCTGCAGACATACTaGCAGGCAGAATGCTGTATACATAATAAATTAATA | + |
|
Preference number: 4 (lower is better) Translates to: TPMLPSSGLQTY*QAECCIHNKLI Trigger: TATTAATTTATTATGTATACAGCATTCTGCCTGCAAGTATGTCTGCAGGCCAGAAGAAGGCAACATAGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| 3UTR CAA 72 bp | ACAAGATGTCTTACCCAAGGAGAAGACTATAATGGTTaGGATCTTAAATGTCACCAAAGTTCCACAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRCLTQGEDYNG*DLKCHQSSTVK Trigger: CTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATTATAGTCTTCTCCTTGGGTAAGACATCTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGACCAGAGAACTGGTCTaGAAAATGAACAGATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKRSPKFERELWKGTNIWTRELV*KMNRFN Trigger: ATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGT...CCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAAGACTCCATATCCTTaGGGTATGTGTTACCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRPPASPVCQLPGHGEASKTPYP*GMCYLS Trigger: GCTCAGGTAACACATACCCAAAGGATATGGAGTCTT...GCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS TCA 90 bp | TCCACGGTGGCCTCGTCCTCGTCATCTTCAGTGCTGATCACTCGCTaGGGCGACTCCGTAACAGAATCTTCCATGACGTCCTCAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: STVASSSSSSVLITR*GDSVTESSMTSSNS Trigger: TGAGTTTGAGGACGTCATGGAAGATTCTGTTACGGAGTCGCCTCAGCGAGTGATCAGCACTGAAGATGACGAGGACGAGGCCACCGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | CAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCACGGGGAAGCAAGCAGGAAAATGAACCATCTTaGTATCCATCATTCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTACLSCLSTPWPRGSKQENEPS*YPSFPL Trigger: CAGAGGGAATGATGGATACAAAGATGGTTCATTTTC...CTGCTTGCTTCCCCGTGGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS GCA 90 bp | TCCTGGGTATCTGCATCTTCGAAATCACCTTCTTGGCTTTCATCCTaGCCTTCCAACTCCACGGTGGCCTCGTCCTCGTCATCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWVSASSKSPSWLSS*PSNSTVASSSSSSV Trigger: CACTGAAGATGACGAGGACGAGGCCACCGTGGAGTTGGAAGGGCAGGATGAAAGCCAAGAAGGTGATTTCGAAGATGCAGATACCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS-3UTR CAA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGCTTGTGGCTTCTTaGTTAGTCCCATCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPVLVAS*LVPSSP Trigger: GGGGGATGATGGGACTAACAAAGAAGCCACAAGCAC...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGATTCGAAATCACCTTCTaGGCTTTCATCCTGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGFEITF*AFILPF Trigger: GAAGGGCAGGATGAAAGCCAAGAAGGTGATTTCGAA...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS-3UTR CAA 90 bp | AGTCAGCAGAGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGAGGCTGGCCTTCCTCTaGCATAATCTTTGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQQRLVTVRCRLLLFLSPRLAFL*HNLWTR Trigger: TCTGGTCCAAAGATTATGCAAGAGGAAGGCCAGCCT...CGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCTCTGCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CAA 90 bp | TATATAGTTAAGGTATGCAAGAGCATGCACACGCGCACGCGCACGCACGCGCGCAAGACTCCATATCCTTaGGGTATGTGTTACCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YIVKVCKSMHTRTRTHARKTPYP*GMCYLS Trigger: GCTCAGGTAACACATACCCAAAGGATATGGAGTCTT...GCGCGCGTGCGTGCGCGTGCGCGTGTGCATGCTCTTGCATACCTTAACTATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| CDS-3UTR CAA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCATGTTTCCCTTCTCTGTaGAGTCGGAACTTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRCRLLLFLSPVDGELTACFPSL*SRNFLA Trigger: AGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAACA...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCTTTGAGATATCAGACCGCCTGCCTCTCCTGTCTGTCAACTCCCTGGCCCTTCTCCAACTTCTTTaGTTCTCTCCTCAAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGFEISDRLPLLSVNSLALLQLL*FSPQSS Trigger: GCTGCTTTGAGGAGAGAACAAAAGAAGTTGGAGAAG...GGCCAGGGAGTTGACAGACAGGAGAGGCAGGCGGTCTGATATCTCAAAGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS-3UTR CAA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAAAGACTCCATATCCTTaGGGTATGTGTTACCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGKTPYP*GMCYLS Trigger: GCTCAGGTAACACATACCCAAAGGATATGGAGTCTT...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
||
| CDS-3UTR CAA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGATGTTTCCCTTCTCTGTaGAGTCGGAACTTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGCFPSL*SRNFLA Trigger: AGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAACA...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
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| CDS-3UTR CAA 90 bp | AGACTCGTGACTGTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGACTTCTCCAACTTCTTTaGTTCTCTCCTCAAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLVTVRCRLLLFLSPVDGLLQLL*FSPQSS Trigger: GCTGCTTTGAGGAGAGAACAAAAGAAGTTGGAGAAG...TCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAACAGTCACGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 |
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| CDS GCA 90 bp | ACTCACTCAGATCCTGCATCTCTTTCTGTAGTCGCAGCAAAGCTTTaGGAGTGCCGACAGCAAACACGTATGTGTCCATGTCCTCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: THSDPASLSVVAAKL*ECRQQTRMCPCPRH Trigger: ATGACGAGGACATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGCAGGATCTGAGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS GCA 90 bp | TCAGATCCTGCATCTCTTTCTGTAGTCGCAGCAAAGCTTTGCGAGTaGCGACAGCAAACACGTATGTGTCCATGTCCTCGTCATTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SDPASLSVVAAKLCE*RQQTRMCPCPRHSL Trigger: CAATGAATGACGAGGACATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGCAGGATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS-3UTR CAA 90 bp | GTTAGGTGCAGACTCCTGCTTTTCCTGTCTCCGGTGGACGGAGAGCTAACGGCACATTGTTACTTTTATTaGCACTTGATCACTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRCRLLLFLSPVDGELTAHCYFY*HLITHW Trigger: CCAGTGAGTGATCAAGTGCAAATAAAAGTAACAATG...TGCCGTTAGCTCTCCGTCCACCGGAGACAGGAAAAGCAGGAGTCTGCACCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS TCA 90 bp | AACCATCTTTGTATCCATCATTCCCTCTGTGACTTCTCCCATTTCTaGCAGAATGGCCAAAGAGTCTGGCAGTCCATACTTTGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NHLCIHHSLCDFSHF*QNGQRVWQSILCSR Trigger: TCTGGAGCAAAGTATGGACTGCCAGACTCTTTGGCCATTCTGTCAGAAATGGGAGAAGTCACAGAGGGAATGATGGATACAAAGATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CCA 90 bp | CAGAATGGCCAAAGAGTCTGGCAGTCCATACTTTGCTCCAGACTTTaGTTTATCACTGCAAAACTCACTCAGATCCTGCATCTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QNGQRVWQSILCSRL*FITAKLTQILHLFL Trigger: CAGAAAGAGATGCAGGATCTGAGTGAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAGACTCTTTGGCCATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CCA 90 bp | CATCATACTCTACTATGTCTTCCTCATCTTCGAAATCATCAAACTTaGCTTCCGAGACACTCCCAAACACCAAGAGGACCACACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHTLLCLPHLRNHQT*LPRHSQTPRGPHRK Trigger: CTTTCTGTGTGGTCCTCTTGGTGTTTGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCGAAGATGAGGAAGACATAGTAGAGTATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGAGGCTGGCCTTCCTCTaGCATAATCTTTGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLKESCGKELIYGRFGRRLAFL*HNLWTR Trigger: TCTGGTCCAAAGATTATGCAAGAGGAAGGCCAGCCT...CCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| CDS CCA 90 bp | GGTATCTGGTTTGTCTTCATAACCCTCAAATTCCTCATCATCATATaGCTCACTTTCTGTATCTCCCTCCTGGGTATCTGCATCTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GIWFVFITLKFLIII*LTFCISLLGICIFE Trigger: TTCGAAGATGCAGATACCCAGGAGGGAGATACAGAAAGTGAGCCATATGATGATGAGGAATTTGAGGGTTATGAAGACAAACCAGATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGTCGAAATCATCAAACTaGGCTTCCGAGACACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQSKSSN*ASETLP Trigger: TGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCGA...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACGTCACTACAACAAAGAAAAAGAAGCCCTAAGTTTGAAAGAGCTGGCAGTCCATACTTaGCTCCAGACTTTGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTRHYNKEKEALSLKELAVHT*LQTLVY Trigger: ATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAG...CTCTTTCAAACTTAGGGCTTCTTTTTCTTTGTTGTAGTGACGTGTGTGTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGAGGTTTGGAAGGTGTTTCCCTTCTCTGTaGAGTCGGAACTTTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLKESCGKELIYGRFGRCFPSL*SRNFLA Trigger: AGCCAAAAAGTTCCGACTCAACAGAGAAGGGAAACA...CCTTCCAAACCTCCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS-3UTR CAA 90 bp | AATGGTTTGGATCTTAAATGTCACCAAAGTTCCACAGTAAAGCCATATAGCCAGCTGGCAGTCCATACTTaGCTCCAGACTTTGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NGLDLKCHQSSTVKPYSQLAVHT*LQTLVY Trigger: ATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAG...CTGGCTATATGGCTTTACTGTGGAACTTTGGTGACATTTAAGATCCAAACCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | CCACTGGACAGACGAGAACAAGAGAATAAAGTAAAACTGCACCATTGGATAGTATACTTTTATTTGCACTaGATCACTCACTGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLDRREQENKVKLHHWIVYFYLH*ITHWPH Trigger: ATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGTA...TACTATCCAATGGTGCAGTTTTACTTTATTCTCTTGTTCTCGTCTGTCCAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGAAGCCCTAAGTTTGAAAGAGAGCTGTGGAAAGGAACTAATATATGGGGAAAATGAACCATCTTaGTATCCATCATTCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKEALSLKESCGKELIYGENEPS*YPSFPL Trigger: CAGAGGGAATGATGGATACAAAGATGGTTCATTTTC...CCCATATATTAGTTCCTTTCCACAGCTCTCTTTCAAACTTAGGGCTTCTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125383.8 |
||
| CDS TCA 72 bp | GCCTCGTCCTCGTCATCTTCAGTGCTGATCACTCGCTaGGGCGACTCCGTAACAGAATCTTCCATGACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSSVLITR*GDSVTESSMTS Trigger: GGACGTCATGGAAGATTCTGTTACGGAGTCGCCTCAGCGAGTGATCAGCACTGAAGATGACGAGGACGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS GCA 72 bp | TCTGCATCTTCGAAATCACCTTCTTGGCTTTCATCCTaGCCTTCCAACTCCACGGTGGCCTCGTCCTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SASSKSPSWLSS*PSNSTVASSSS Trigger: TGACGAGGACGAGGCCACCGTGGAGTTGGAAGGGCAGGATGAAAGCCAAGAAGGTGATTTCGAAGATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS GCA 72 bp | GCATCTCTTTCTGTAGTCGCAGCAAAGCTTTGCGAGTaGCGACAGCAAACACGTATGTGTCCATGTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASLSVVAAKLCE*RQQTRMCPCPR Trigger: ACGAGGACATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS CAA 72 bp | GAGCCAGGCACATTAAATGTAAACAGTAGCGTCCTCTaGGTGTCAGGCAGCTTTAAAGGCTGGCCTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPGTLNVNSSVL*VSGSFKGWPSL Trigger: CAGGGAAGGCCAGCCTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGTTTACATTTAATGTGCCTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137915.2 |
||
| CDS CAA 90 bp | AACTCACTCAGATCCTGCATCTCTTTCTGTAGTCGCAGCAAAGCTTaGCGAGTGCCGACAGCAAACACGTATGTGTCCATGTCCTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NSLRSCISFCSRSKA*RVPTANTYVSMSSS Trigger: TGACGAGGACATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGCAGGATCTGAGTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
||
| CDS CAA 90 bp | GTGTTACCTGAGCCAGGCACATTAAATGTAAACAGTAGCGTCCTCTaGGTGTCAGGCAGCTTTAAAGGCTGGCCTTCCCTGTCATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLPEPGTLNVNSSVL*VSGSFKGWPSLSSE Trigger: CTCTGATGACAGGGAAGGCCAGCCTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGTTTACATTTAATGTGCCTGGCTCAGGTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137915.2 |
||
| CDS GCA 72 bp | GATCCTGCATCTCTTTCTGTAGTCGCAGCAAAGCTTTaGGAGTGCCGACAGCAAACACGTATGTGTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: DPASLSVVAAKL*ECRQQTRMCPC Trigger: ACATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGCAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
||
| CDS CAA 72 bp | AGATCCTGCATCTCTTTCTGTAGTCGCAGCAAAGCTTaGCGAGTGCCGACAGCAAACACGTATGTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RSCISFCSRSKA*RVPTANTYVSM Trigger: CATGGACACATACGTGTTTGCTGTCGGCACTCGCAAAGCTTTGCTGCGACTACAGAAAGAGATGCAGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CAA 72 bp | GAGCCAGGCACATTAAATGTAAACAGTAGCGTCCTCTaGGTGTCAGGCAGCTTTAAAGGCTGGCCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EPGTLNVNSSVL*VSGSFKGWPSS Trigger: AGAGGAAGGCCAGCCTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGTTTACATTTAATGTGCCTGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 ENSMUST00000125383.8 |
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| CDS CAA 90 bp | GTGTTACCTGAGCCAGGCACATTAAATGTAAACAGTAGCGTCCTCTaGGTGTCAGGCAGCTTTAAAGGCTGGCCTTCCTCTTGCATAATC | + |
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Preference number: 6 (lower is better) Translates to: VLPEPGTLNVNSSVL*VSGSFKGWPSSCII Trigger: GATTATGCAAGAGGAAGGCCAGCCTTTAAAGCTGCCTGACACCAAGAGGACGCTACTGTTTACATTTAATGTGCCTGGCTCAGGTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002043.10 ENSMUST00000106865.8 ENSMUST00000125383.8 |
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| CDS CAA 90 bp | CTCCCATTTCTGACAGAATGGCCAAAGAGTCTGGCAGTCCATACTTaGCTCCAGACTTTGGTTTATCACTGCAAAACTCACTCAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LPFLTEWPKSLAVHT*LQTLVYHCKTHSDP Trigger: AGGATCTGAGTGAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAGACTCTTTGGCCATTCTGTCAGAAATGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CCA 72 bp | CTACTATGTCTTCCTCATCTTCGAAATCATCAAACTTaGCTTCCGAGACACTCCCAAACACCAAGAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: LLCLPHLRNHQT*LPRHSQTPRGP Trigger: TGGTCCTCTTGGTGTTTGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCGAAGATGAGGAAGACATAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS CAA 72 bp | TCTACTATGTCTTCCTCATCTTCGAAATCATCAAACTaGGCTTCCGAGACACTCCCAAACACCAAGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: STMSSSSSKSSN*ASETLPNTKRT Trigger: GGTCCTCTTGGTGTTTGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCGAAGATGAGGAAGACATAGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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| CDS CAA 72 bp | CTGACAGAATGGCCAAAGAGTCTGGCAGTCCATACTTaGCTCCAGACTTTGGTTTATCACTGCAAAACTCAC | + |
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Preference number: 6 (lower is better) Translates to: LTEWPKSLAVHT*LQTLVYHCKTH Trigger: GTGAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAGACTCTTTGGCCATTCTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CAA 90 bp | ACAGAATGGCCAAAGAGTCTGGCAGTCCATACTTTGCTCCAGACTTaGGTTTATCACTGCAAAACTCACTCAGATCCTGCATCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TEWPKSLAVHTLLQT*VYHCKTHSDPASLS Trigger: AGAAAGAGATGCAGGATCTGAGTGAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAGACTCTTTGGCCATTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CCA 72 bp | CAAAGAGTCTGGCAGTCCATACTTTGCTCCAGACTTTaGTTTATCACTGCAAAACTCACTCAGATCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: QRVWQSILCSRL*FITAKLTQILH Trigger: ATGCAGGATCTGAGTGAGTTTTGCAGTGATAAACCAAAGTCTGGAGCAAAGTATGGACTGCCAGACTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002043.10 ENSMUST00000125383.8 |
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| CDS CAA 90 bp | TCATCATACTCTACTATGTCTTCCTCATCTTCGAAATCATCAAACTaGGCTTCCGAGACACTCCCAAACACCAAGAGGACCACACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSYSTMSSSSSKSSN*ASETLPNTKRTTQK Trigger: TTTCTGTGTGGTCCTCTTGGTGTTTGGGAGTGTCTCGGAAGCCAAGTTTGATGATTTCGAAGATGAGGAAGACATAGTAGAGTATGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002043.10 |
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