Pregenerated sensors for CCDC42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045915Ensembl transcript IDs: ENSMUST00000063006.12, ENSMUST00000102612.2, ENSMUST00000154294.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGTTCTCTCAAGTGTCTTaGAACATTCTAGAAGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGFSQVS*NILEAC Trigger: ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAA...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGTCATCAGGAAGCAGTTaGTCTTCAACAGCTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: HLMFLGMGQTEAGGESQRSSGSS*SSTAGL Trigger: TAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGA...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGTTCTCTCAAGTGTCTTaGAACATTCTAGAAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: HLMFLGMGQTEAGGESQRFSQVS*NILEAC Trigger: ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAA...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| 3UTR CCA 72 bp | TGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTaGACTAGGGGGACTAGACCACAGGCTCACCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WFIIRKQLVFNS*TRGTRPQAHQE Trigger: TTCCTGGTGAGCCTGTGGTCTAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACGGGCCAGCCGCGCCTTaGCACGTTCAATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVVHHQEAVGLQQLDGPAAP*HVQSSP Trigger: AGGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCC...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR TCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTAGTGGGCTTGGGTCACTaGATAGCTGGCTTCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLVGLGH*IAGFRG Trigger: CCCTCGGAAGCCAGCTATTCAGTGACCCAAGCCCAC...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102612.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGGAGATTCCCAAAAGATaGCATCACTGCGGGCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGEIPKR*HHCGPG Trigger: ACCGGGCCCGCAGTGATGTCATCTTTTGGGAATCTC...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTACCATCATCTCCTGCTTaGCCTTGGCCAGCTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLPSSPA*PWPAPA Trigger: TGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGG...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGLAAVF*MCAQRD Trigger: ATCTCGCTGGGCACACATCCAAAACACGGCGGCCAA...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| 3UTR CAA 72 bp | GGGGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTaGGTCTTCAACAGCTGGACTAGGGGGACTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GEVGRWFIIRKQ*VFNSWTRGTRP Trigger: TGGTCTAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACGACTGCATGAGGTCATaGTGCATGCTCACCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGREVVHHQEAVGLQQLDDCMRS*CMLTRV Trigger: GACCCTGGTGAGCATGCACCATGACCTCATGCAGTC...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGAGCGCCATCATCTCCTaGTTGGCCTTGGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRSAIIS*LALASS Trigger: GGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCT...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTAGCAGGAGGGTCTTCTTaGCCGCCGTGTTTTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLAGGSS*PPCFGC Trigger: ACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGC...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACGCTCGGATCCGTTTCTaGTCGTTCTCCTGGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVVHHQEAVGLQQLDARIRF*SFSWMN Trigger: ATTCATCCAGGAGAACGACCAGAAACGGATCCGAGC...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTATCCTCCAGGGACACTTaGGTGGATTCCTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLSSRDT*VDSFSC Trigger: GCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGA...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTACGTGTTTTGGATGTGTaGCCAGCGAGATTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLRVLDV*PARFLR Trigger: TCTGAGGAATCTCGCTGGGCACACATCCAAAACACG...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTATTCTTCTCCAGGAGCTaGATAGATGGGGAGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLFFSRS*IDGESD Trigger: GTCAGACTCCCCATCTATCCAGCTCCTGGAGAAGAA...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGGACTGCATGAGGTCATaGTGCATGCTCACCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRDCMRS*CMLTRV Trigger: GACCCTGGTGAGCATGCACCATGACCTCATGCAGTC...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGCGCCATCATCTCCTaGTTGGCCTTGGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSSAIIS*LALASS Trigger: GGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCT...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACATTCCTTCAGTTGCTTaGTCACGATCTGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVVHHQEAVGLQQLDIPSVA*SRSGRG Trigger: ACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAAT...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTAGTGGATTCCTTCAGTTaGTTGCTCACGATCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLVDSFS*LLTIWK Trigger: CTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCAC...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGTCCTCCAGGGACACTTaGGTGGATTCCTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRSSRDT*VDSFSC Trigger: GCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGA...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTGGGCCAGCCGCGCCTTaGCACGTTCAATCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSGPAAP*HVQSSP Trigger: AGGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCC...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGTCGAACTTCTGGATATaGGCCTTCAGCTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRSNFWI*AFSCSS Trigger: GGAAGAGCAGCTGAAGGCCCATATCCAGAAGTTCGA...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGCCATCATCTCCTGCTTaGCCTTGGCCAGCTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LLFPRSFLSSVLEHSRSMPSSPA*PWPAPA Trigger: TGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGG...CATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHCLLTI*KRFSVA Trigger: GGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCA...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGGTGGATTCCTTCAGTTaGTTGCTCACGATCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRVDSFS*LLTIWK Trigger: CTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCAC...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR TCA 90 bp | CTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGGAGATTCCCAAAAGATaGCATCACTGCGGGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LLFPRSFLSSVLEHSRSMEIPKR*HHCGPG Trigger: ACCGGGCCCGCAGTGATGTCATCTTTTGGGAATCTC...CATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGTTCTGGTCGTTCTCCTaGATGAATTGCTCGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLGMGQTEAGGESQRFWSFS*MNCSNF Trigger: GAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAA...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAATTGACACTCAGCTTCTaGTGTTCCAGCCTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILELTLSF*CSSLSA Trigger: GGCGCTGAGGCTGGAACACCAGAAGCTGAGTGTCAA...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAGCAGGAGGGTCTTCTTaGCCGCCGTGTTTTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRAGGSS*PPCFGC Trigger: ACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGC...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCAGGAGGGTCTTCTTaGCCGCCGTGTTTTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEAGGSS*PPCFGC Trigger: ACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGC...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGATGCTTGCTCACGATCTaGAAGAGGTTCAGCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRCLLTI*KRFSVA Trigger: GGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCA...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTTCCTCCAGGGACACTTaGGTGGATTCCTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSSSRDT*VDSFSC Trigger: GCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGA...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTCGTAGTCTTGCAGCTTaGCACTCAGCTTCTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSRSLAA*HSASGV Trigger: AACACCAGAAGCTGAGTGTCAAGCTGCAAGACTACG...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGATGCATGAGGTCATGGTaGATGCTCACCAGGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRCMRSW*MLTRVL Trigger: CAAGACCCTGGTGAGCATGCACCATGACCTCATGCA...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATCTGCTCCTCAACATTTaGGAACTTCTGCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHLLLNI*ELLQQL Trigger: CAACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAG...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTTCGAACTTCTGGATATaGGCCTTCAGCTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSSNFWI*AFSCSS Trigger: GGAAGAGCAGCTGAAGGCCCATATCCAGAAGTTCGA...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTTGACACTCAGCTTCTaGTGTTCCAGCCTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFLGLFSQVSWNILEACLTLSF*CSSLSA Trigger: GGCGCTGAGGCTGGAACACCAGAAGCTGAGTGTCAA...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFLGLFSQVSWNILEACLAAVF*MCAQRD Trigger: ATCTCGCTGGGCACACATCCAAAACACGGCGGCCAA...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR CCA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLGLFSQVSWNILEACYFCLLTI*KRFSVA Trigger: GGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCA...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS-3UTR TCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGATAGATGGGGAGTCTaGCTGCTCCTCAACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEDRWGV*LLLNIW Trigger: CCAAATGTTGAGGAGCAGTCAGACTCCCCATCTATC...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR TCA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGACGTAGTCTTGCAGCTTaGCACTCAGCTTCTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRRSLAA*HSASGV Trigger: AACACCAGAAGCTGAGTGTCAAGCTGCAAGACTACG...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS-3UTR GCA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATATTCCTTCAGTTGCTTaGTCACGATCTGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHIPSVA*SRSGRG Trigger: ACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAAT...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTGCATGAGGTCATGGTaGATGCTCACCAGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLGLFSQVSWNILEACCMRSW*MLTRVL Trigger: CAAGACCCTGGTGAGCATGCACCATGACCTCATGCA...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAATTCTTCTCCAGGAGCTaGATAGATGGGGAGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEFFSRS*IDGESD Trigger: GTCAGACTCCCCATCTATCCAGCTCCTGGAGAAGAA...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTTCTGGTCGTTCTCCTaGATGAATTGCTCGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHFWSFS*MNCSNF Trigger: GAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAA...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCTCGGATCCGTTTCTaGTCGTTCTCCTGGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEARIRF*SFSWMN Trigger: ATTCATCCAGGAGAACGACCAGAAACGGATCCGAGC...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCGATAGATGGGGAGTCTaGCTGCTCCTCAACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLGLFSQVSWNILEACYFDRWGV*LLLNIW Trigger: CCAAATGTTGAGGAGCAGTCAGACTCCCCATCTATC...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGTGGATTCCTTCAGTTaGTTGCTCACGATCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEVDSFS*LLTIWK Trigger: CTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCAC...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGACGTGTTTTGGATGTGTaGCCAGCGAGATTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRRVLDV*PARFPK Trigger: TTTTGGGAATCTCGCTGGGCACACATCCAAAACACG...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAACGTGTTTTGGATGTGTaGCCAGCGAGATTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILERVLDV*PARFPK Trigger: TTTTGGGAATCTCGCTGGGCACACATCCAAAACACG...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTTTCTGTCCAGATGTCTaGCAGGTCTTGTATAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSFCPDV*QVLYKL Trigger: CAGTTTATACAAGACCTGTCAGACATCTGGACAGAA...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAATTCCTTCAGTTGCTTaGTCACGATCTGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEIPSVA*SRSGRG Trigger: ACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAAT...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCCTGCTCCTCAACATTTaGGAACTTCTGCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLGLFSQVSWNILEACYFLLLNI*ELLQQL Trigger: CAACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAG...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAACATTCTCCGTTGGAATaGCTCCTTCTTATGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTFSFLGLFSQVSWNILEHSPLE*LLLMFH Trigger: ATGGAACATAAGAAGGAGGCATTCCAACGGAGAATG...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGGTTTCCATTCTCCGTTaGAATGCCTCCTTCTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFPRSFLSSVLEHSRSMVSILR*NASFLC Trigger: ACATAAGAAGGAGGCATTCCAACGGAGAATGGAAAC...CATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTCATTCTCCGTTGGAATaGCTCCTTCTTATGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFLGLFSQVSWNILEACHSPLE*LLLMFH Trigger: ATGGAACATAAGAAGGAGGCATTCCAACGGAGAATG...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTTGTATAAACTGCTaGATCATGTCTAGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHSCINC*IMSSCL Trigger: CAAACAACTAGACATGATCCAGCAGTTTATACAAGA...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTTCTTGTATAAACTGCTaGATCATGTCTAGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSSCINC*IMSSCL Trigger: CAAACAACTAGACATGATCCAGCAGTTTATACAAGA...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTCTTGTATAAACTGCTaGATCATGTCTAGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFPRSFLSSVLEHSRSMSCINC*IMSSCL Trigger: CAAACAACTAGACATGATCCAGCAGTTTATACAAGA...CATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | GCTTCTGGTGTTCCAGCCTCAGCGCCATCATCTCCTGCTTGGCCTTaGCCAGCTCCCGCAGGCGCAGTCGCTTCAGTTCACGCTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASGVPASAPSSPAWP*PAPAGAVASVHAPC Trigger: ACAAGGAGCGTGAACTGAAGCGACTGCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCTGAGGCTGGAACACCAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | CACTCAGCTTCTGGTGTTCCAGCCTCAGCGCCATCATCTCCTGCTTaGCCTTGGCCAGCTCCCGCAGGCGCAGTCGCTTCAGTTCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSASGVPASAPSSPA*PWPAPAGAVASVHA Trigger: AGCGTGAACTGAAGCGACTGCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCTGAGGCTGGAACACCAGAAGCTGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGATCTCCTGCTTGGCCTaGGCCAGCTCCCGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGISCLA*ASSRRR Trigger: GCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGAT...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS GCA 90 bp | GGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTTGGATGTGTaGCCAGCGAGATTCCCAAAAGATGACATCACTGCGGGCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAKQEGLLGRRVLDV*PARFPKDDITAGPV Trigger: GACCGGGCCCGCAGTGATGTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGCTTCTCCTGGCCTTCTaGAGCCGACTGCATGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGLLLAF*SRLHEV Trigger: GACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAG...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS TCA 90 bp | GGGGAGTCTGACTGCTCCTCAACATTTGGGAACTTCTGCAGCAGTTaGAGCAGCCGCTCCCCATACTGTAGCCGGAAGTATTCGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GESDCSSTFGNFCSS*SSRSPYCSRKYSAK Trigger: CTTGGCCGAATACTTCCGGCTACAGTATGGGGAGCGGCTGCTTCAACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGTCAGACTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS TCA 90 bp | CCTTGGCACGTTCAATCTTCTCCTGGCCTTCTTGAGCCGACTGCATaGGGTCATGGTGCATGCTCACCAGGGTCTTGTAGCGGGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PWHVQSSPGLLEPTA*GHGACSPGSCSGQS Trigger: TGATTGCCCGCTACAAGACCCTGGTGAGCATGCACCATGACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAGATTGAACGTGCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGGAACTTCTGCAGCAGTaGAAGCAGCCGCTCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGELLQQ*KQPLPI Trigger: TATGGGGAGCGGCTGCTTCAACTGCTGCAGAAGTTC...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GGREVVHHQEAVGLQQLDSRRVF*AAVFWM Trigger: CATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCT...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | ATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGATTCCTCAGAGTTCTCCACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILMVPSRRVFLAAVF*MCAQRDSSEFSTTF Trigger: GAAGGTGGTGGAGAACTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS CCA 90 bp | TCCAGGGACACTTGGGTGGATTCCTTCAGTTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTCGCCATCTTAATGGTGCCAAGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRDTWVDSFSCLLTI*KRFSVAILMVPSRR Trigger: CCTCCTGCTTGGCACCATTAAGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | ATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGATTCCCAAAAGATGACATCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ILMVPSRRVFLAAVF*MCAQRDSQKMTSLR Trigger: CCGCAGTGATGTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGACTAGAACTTCTGCAGCAGTaGAAGCAGCCGCTCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GGSSSGSSWSSTAGLGGLELLQQ*KQPLPI Trigger: TATGGGGAGCGGCTGCTTCAACTGCTGCAGAAGTTC...TAGTCCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATGCCATCATCTCCTGCTaGGCCTTGGCCAGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHAIISC*ALASSR Trigger: GCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGC...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGGGTGGATTCCTTCAGTaGCTTGCTCACGATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGGGFLQ*LAHDLE Trigger: TTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACC...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HLMFLGMGQTEAGGESQRSRRVF*AAVFWM Trigger: CATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCT...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACGGTGGATTCCTTCAGTaGCTTGCTCACGATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGREVVHHQEAVGLQQLDGGFLQ*LAHDLE Trigger: TTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACC...GTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCCTACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGATCATGTCTAGTTGTTaGTGTGTGTCCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGIMSSC*CVSSRD Trigger: GTCCCTGGAGGACACACACAAACAACTAGACATGAT...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTCGGGCCAGCCGCGCCTaGGCACGTTCAATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSRASRA*ARSIFS Trigger: GGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCCG...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS TCA 90 bp | CTTGGCCTCTTTCTTCTTCTCCAGGAGCTGGATAGATGGGGAGTCTaGCTGCTCCTCAACATTTGGGAACTTCTGCAGCAGTTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLFLLLQELDRWGV*LLLNIWELLQQLKQ Trigger: CTGCTTCAACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGTCAGACTCCCCATCTATCCAGCTCCTGGAGAAGAAGAAAGAGGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS GCA 90 bp | TGTTTGTGTGTGTCCTCCAGGGACACTTGGGTGGATTCCTTCAGTTaGTTGCTCACGATCTGGAAGAGGTTCAGCGTCGCCATCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: CLCVSSRDTWVDSFS*LLTIWKRFSVAILM Trigger: CATTAAGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACACACAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | GGATCATGTCTAGTTGTTTGTGTGTGTCCTCCAGGGACACTTGGGTaGATTCCTTCAGTTGCTTGCTCACGATCTGGAAGAGGTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSCLVVCVCPPGTLG*IPSVACSRSGRGSA Trigger: CGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACACACAAACAACTAGACATGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCATCTCCTGCTTGGCCTaGGCCAGCTCCCGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLGLFSQVSWNILEACYFISCLA*ASSRRR Trigger: GCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGAT...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAGCCATCATCTCCTGCTaGGCCTTGGCCAGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRAIISC*ALASSR Trigger: GCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGC...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | CGTTTCTGGTCGTTCTCCTGGATGAATTGCTCGAACTTCTGGATATaGGCCTTCAGCTGCTCTTCCTTAATACCTAGTTCTTCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RFWSFSWMNCSNFWI*AFSCSSLIPSSSQR Trigger: GCGCTGGGAAGAACTAGGTATTAAGGAAGAGCAGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | TGCTGGATCATGTCTAGTTGTTTGTGTGTGTCCTCCAGGGACACTTaGGTGGATTCCTTCAGTTGCTTGCTCACGATCTGGAAGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWIMSSCLCVSSRDT*VDSFSCLLTIWKRF Trigger: GAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACACACAAACAACTAGACATGATCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTGGTTCATCATCAGGAAGCAGTTGGTCTTCAACAGCTGGACTAGGGGGCATCCGGACTTGCTGTaGTTCTTTCTTCTTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRWFIIRKQLVFNSWTRGHPDLL*FFLLYF Trigger: GAAGTAAAGAAGAAAGAACAACAGCAAGTCCGGATG...CCCCCTAGTCCAGCTGTTGAAGACCAACTGCTTCCTGATGATGAACCACCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCCGGGCCAGCCGCGCCTaGGCACGTTCAATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLGLFSQVSWNILEACYFRASRA*ARSIFS Trigger: GGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCCG...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | CGGATCCGTTTCTGGTCGTTCTCCTGGATGAATTGCTCGAACTTCTaGATATGGGCCTTCAGCTGCTCTTCCTTAATACCTAGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIRFWSFSWMNCSNF*IWAFSCSSLIPSSS Trigger: GGAAGAACTAGGTATTAAGGAAGAGCAGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAAACGGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAACTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTFSFLGLFSQVSWNILELGRRV*DVCPAR Trigger: TCTCGCTGGGCACACATCCAAAACACGGCGGCCAAG...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATGTCCTCCAGGGACACTaGGGTGGATTCCTTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHVLQGH*GGFLQL Trigger: CAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGAC...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CATTTAATGTTTTTAGGGATGGGACAAACTGAGGCTGGAGGGGAAAGCCAACGGACTGCTCCTCAACATTaGGGAACTTCTGCAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLMFLGMGQTEAGGESQRTAPQH*GTSAAV Trigger: AACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGT...CCGTTGGCTTTCCCCTCCAGCCTCAGTTTGTCCCATCCCTAAAAACATTAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTTACTTCCTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLGLFSQVSWNILEACYFLGRRV*DVCPAR Trigger: TCTCGCTGGGCACACATCCAAAACACGGCGGCCAAG...GAAGTAACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRSRRVF*AAVFWM Trigger: CATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCT...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATGATTCCTTCAGTTGCTaGCTCACGATCTGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHDSFSC*LTIWKR Trigger: CCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATC...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATGGTGGATTCCTTCAGTaGCTTGCTCACGATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LTRNLLFPRSFLSSVLEHGGFLQ*LAHDLE Trigger: TTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACC...ATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTCTTCTCCTGGCCTTCTaGAGCCGACTGCATGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSFLGLFSQVSWNILEACLLLAF*SRLHEV Trigger: GACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAG...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | GGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCCTCCTGCATGATCTaGGCCTCTTTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTFSFLGLFSQVSWNILEASCMI*ASFFFS Trigger: GGAGAAGAAGAAAGAGGCCAAGATCATGCAGGAGGC...TTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTGTCCTCCAGGGACACTaGGGTGGATTCCTTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFLGLFSQVSWNILEACVLQGH*GGFLQL Trigger: CAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGAC...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 90 bp | TTCTTTACTTCTGTCCAGATGTCTGACAGGTCTTGTATAAACTGCTaGATCATGTCTAGTTGTTTGTGTGTGTCCTCCAGGGACACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FFTSVQMSDRSCINC*IMSSCLCVSSRDTW Trigger: CCAAGTGTCCCTGGAGGACACACACAAACAACTAGACATGATCCAGCAGTTTATACAAGACCTGTCAGACATCTGGACAGAAGTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTACTGCTCCTCAACATTaGGGAACTTCTGCAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSTAPQH*GTSAAV Trigger: AACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGT...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTATCATGTCTAGTTGTTaGTGTGTGTCCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRNLLFPRSFLSSVLEHSIMSSC*CVSSRD Trigger: GTCCCTGGAGGACACACACAAACAACTAGACATGAT...AGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTGATTCCTTCAGTTGCTaGCTCACGATCTGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFLGLFSQVSWNILEACDSFSC*LTIWKR Trigger: CCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATC...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTATCATGTCTAGTTGTTaGTGTGTGTCCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSFLGLFSQVSWNILEACIMSSC*CVSSRD Trigger: GTCCCTGGAGGACACACACAAACAACTAGACATGAT...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGACATCCGGACTTGCTGTaGTTCTTTCTTCTTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNLLFPRSFLSSVLEHSRHPDLL*FFLLYF Trigger: GAAGTAAAGAAGAAAGAACAACAGCAAGTCCGGATG...TCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAAGGTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCCTAGGTCTTTTCTCTCAAGTGTCTTGGAACATTCTAGAAGCATGTCATCCGGACTTGCTGTaGTTCTTTCTTCTTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSFLGLFSQVSWNILEACHPDLL*FFLLYF Trigger: GAAGTAAAGAAGAAAGAACAACAGCAAGTCCGGATG...ACATGCTTCTAGAATGTTCCAAGACACTTGAGAGAAAAGACCTAGGAAAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 72 bp | TCTGGTGTTCCAGCCTCAGCGCCATCATCTCCTGCTTaGCCTTGGCCAGCTCCCGCAGGCGCAGTCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGVPASAPSSPA*PWPAPAGAVAS Trigger: TGAAGCGACTGCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCTGAGGCTGGAACACCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | AGCTTCTGGTGTTCCAGCCTCAGCGCCATCATCTCCTGCTTGGCCTaGGCCAGCTCCCGCAGGCGCAGTCGCTTCAGTTCACGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFWCSSLSAIISCLA*ASSRRRSRFSSRSL Trigger: CAAGGAGCGTGAACTGAAGCGACTGCGCCTGCGGGAGCTGGCCAAGGCCAAGCAGGAGATGATGGCGCTGAGGCTGGAACACCAGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CCA 72 bp | CGTCCTTCTCCTCCATGTAGCGGGCCAGCCGCGCCTTaGCACGTTCAATCTTCTCCTGGCCTTCTTGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RPSPPCSGPAAP*HVQSSPGLLEP Trigger: CGGCTCAAGAAGGCCAGGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCCGCTACATGGAGGAGAAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | GCGGGCCAGCCGCGCCTTGGCACGTTCAATCTTCTCCTGGCCTTCTaGAGCCGACTGCATGAGGTCATGGTGCATGCTCACCAGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGQPRLGTFNLLLAF*SRLHEVMVHAHQGL Trigger: AAGACCCTGGTGAGCATGCACCATGACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAGATTGAACGTGCCAAGGCGCGGCTGGCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 72 bp | GTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGATTCCTCAGAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPSRRVFLAAVF*MCAQRDSSEFS Trigger: GGAGAACTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS CAA 72 bp | GGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGATTCCTCAGAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GAKQEGLLGRRV*DVCPARFLRVL Trigger: GAGAACTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS CAA 72 bp | CCGCGCCTTGGCACGTTCAATCTTCTCCTGGCCTTCTaGAGCCGACTGCATGAGGTCATGGTGCATGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRLGTFNLLLAF*SRLHEVMVHAH Trigger: GTGAGCATGCACCATGACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAGATTGAACGTGCCAAGGCGCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | AGGTTCAGCGTCGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATGTGTGCCCAGCGAGATTCCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RFSVAILMVPSRRVF*AAVFWMCAQRDSSE Trigger: CTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCGACGCTGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS GCA 72 bp | CAGGAGGGTCTTCTTGGCCGCCGTGTTTTGGATGTGTaGCCAGCGAGATTCCTCAGAGTTCTCCACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: QEGLLGRRVLDV*PARFLRVLHHL Trigger: AAGGTGGTGGAGAACTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS GCA 72 bp | GTGTCCTCCAGGGACACTTGGGTGGATTCCTTCAGTTaGTTGCTCACGATCTGGAAGAGGTTCAGCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSRDTWVDSFS*LLTIWKRFSVA Trigger: GGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 72 bp | GTCGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATGTGTGCCCAGCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VAILMVPSRRVF*AAVFWMCAQRD Trigger: ATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 72 bp | GGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGATTCCCAAAAGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GAKQEGLLGRRV*DVCPARFPKDD Trigger: GTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | AGGTTCAGCGTCGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCCGCCGTGTTTTGGATGTGTGCCCAGCGAGATTCCCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFSVAILMVPSRRVF*AAVFWMCAQRDSQK Trigger: CTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCGACGCTGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS GCA 72 bp | CCTCCAGGGACACTTGGGTGGATTCCTTCAGTTGCTTaGTCACGATCTGGAAGAGGTTCAGCGTCGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGTLGWIPSVA*SRSGRGSASPS Trigger: AGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS GCA 72 bp | CAGGAGGGTCTTCTTGGCCGCCGTGTTTTGGATGTGTaGCCAGCGAGATTCCCAAAAGATGACATCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: QEGLLGRRVLDV*PARFPKDDITA Trigger: CGCAGTGATGTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CCA 72 bp | GTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTTaGATGTGTGCCCAGCGAGATTCCCAAAAGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: VPSRRVFLAAVF*MCAQRDSQKMT Trigger: TGTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 72 bp | TCCTCCAGGGACACTTGGGTGGATTCCTTCAGTTGCTaGCTCACGATCTGGAAGAGGTTCAGCGTCGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSRDTWVDSFSC*LTIWKRFSVAI Trigger: GATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 72 bp | TGTGTCCTCCAGGGACACTTGGGTGGATTCCTTCAGTaGCTTGCTCACGATCTGGAAGAGGTTCAGCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CVLQGHLGGFLQ*LAHDLEEVQRR Trigger: GCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | CATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGATTCCTCAGAGTTCTCCACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLNGAKQEGLLGRRV*DVCPARFLRVLHHL Trigger: AAGGTGGTGGAGAACTCTGAGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063006.12 |
||
| CDS TCA 72 bp | GTTCAATCTTCTCCTGGCCTTCTTGAGCCGACTGCATaGGGTCATGGTGCATGCTCACCAGGGTCTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQSSPGLLEPTA*GHGACSPGSCS Trigger: GCTACAAGACCCTGGTGAGCATGCACCATGACCTCATGCAGTCGGCTCAAGAAGGCCAGGAGAAGATTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
||
| CDS CAA 72 bp | GGCTCGGATCCGTTTCTGGTCGTTCTCCTGGATGAATaGCTCGAACTTCTGGATATGGGCCTTCAGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSDPFLVVLLDE*LELLDMGLQLL Trigger: GAGCAGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAAACGGATCCGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | GTTCTCCACCACCTTCTCCAGGTACTTGTTGAAGATGGCGTAGTCTaGCAGCTTGACACTCAGCTTCTGGTGTTCCAGCCTCAGCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLHHLLQVLVEDGVV*QLDTQLLVFQPQRH Trigger: ATGGCGCTGAGGCTGGAACACCAGAAGCTGAGTGTCAAGCTGCAAGACTACGCCATCTTCAACAAGTACCTGGAGAAGGTGGTGGAGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
||
| CDS CAA 90 bp | CATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCCGCCGTGTTTaGGATGTGTGCCCAGCGAGATTCCCAAAAGATGACATCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HLNGAKQEGLLGRRV*DVCPARFPKDDITA Trigger: CGCAGTGATGTCATCTTTTGGGAATCTCGCTGGGCACACATCCAAAACACGGCGGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS TCA 72 bp | GACTGCTCCTCAACATTTGGGAACTTCTGCAGCAGTTaGAGCAGCCGCTCCCCATACTGTAGCCGGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: DCSSTFGNFCSS*SSRSPYCSRKY Trigger: ATACTTCCGGCTACAGTATGGGGAGCGGCTGCTTCAACTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS GCA 72 bp | GCTCGGATCCGTTTCTGGTCGTTCTCCTGGATGAATTaGTCGAACTTCTGGATATGGGCCTTCAGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ARIRFWSFSWMN*SNFWIWAFSCS Trigger: AGAGCAGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAAACGGATCCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CCA 72 bp | TCTTCCCAGCGCAAGTTCAGCGTTTCCATTCTCCGTTaGAATGCCTCCTTCTTATGTTCCATGGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSQRKFSVSILR*NASFLCSMASC Trigger: GCAGGAGGCCATGGAACATAAGAAGGAGGCATTCCAACGGAGAATGGAAACGCTGAACTTGCGCTGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CAA 90 bp | TTGTGTGTGTCCTCCAGGGACACTTGGGTGGATTCCTTCAGTTGCTaGCTCACGATCTGGAAGAGGTTCAGCGTCGCCATCTTAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LCVSSRDTWVDSFSC*LTIWKRFSVAILMV Trigger: CACCATTAAGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS TCA 72 bp | TTAGGGCTCGGATCCGTTTCTGGTCGTTCTCCTGGATaGATTGCTCGAACTTCTGGATATGGGCCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGLGSVSGRSPG*IARTSGYGPSA Trigger: AGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAAACGGATCCGAGCCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CCA 72 bp | ACTTGGGTGGATTCCTTCAGTTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTCGCCATCTTAATGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TWVDSFSCLLTI*KRFSVAILMVP Trigger: TGGCACCATTAAGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS CAA 72 bp | TTCTTCCCAGCGCAAGTTCAGCGTTTCCATTCTCCGTaGGAATGCCTCCTTCTTATGTTCCATGGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FFPAQVQRFHSP*ECLLLMFHGLL Trigger: CAGGAGGCCATGGAACATAAGAAGGAGGCATTCCAACGGAGAATGGAAACGCTGAACTTGCGCTGGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CAA 72 bp | CACCTTCTCCAGGTACTTGTTGAAGATGGCGTAGTCTaGCAGCTTGACACTCAGCTTCTGGTGTTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLLQVLVEDGVV*QLDTQLLVFQP Trigger: AGGCTGGAACACCAGAAGCTGAGTGTCAAGCTGCAAGACTACGCCATCTTCAACAAGTACCTGGAGAAGGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CAA 90 bp | TTGTTTGTGTGTGTCCTCCAGGGACACTTGGGTGGATTCCTTCAGTaGCTTGCTCACGATCTGGAAGAGGTTCAGCGTCGCCATCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LFVCVLQGHLGGFLQ*LAHDLEEVQRRHLN Trigger: ATTAAGATGGCGACGCTGAACCTCTTCCAGATCGTGAGCAAGCAACTGAAGGAATCCACCCAAGTGTCCCTGGAGGACACACACAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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| CDS TCA 72 bp | TTTCTTCTTCTCCAGGAGCTGGATAGATGGGGAGTCTaGCTGCTCCTCAACATTTGGGAACTTCTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLLLQELDRWGV*LLLNIWELLQQ Trigger: CTGCTGCAGAAGTTCCCAAATGTTGAGGAGCAGTCAGACTCCCCATCTATCCAGCTCCTGGAGAAGAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS CCA 72 bp | TTCTGGTCGTTCTCCTGGATGAATTGCTCGAACTTCTaGATATGGGCCTTCAGCTGCTCTTCCTTAATACCT | + |
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Preference number: 6 (lower is better) Translates to: FWSFSWMNCSNF*IWAFSCSSLIP Trigger: AGGTATTAAGGAAGAGCAGCTGAAGGCCCATATCCAGAAGTTCGAGCAATTCATCCAGGAGAACGACCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063006.12 ENSMUST00000154294.8 |
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| CDS GCA 72 bp | ACTTCTGTCCAGATGTCTGACAGGTCTTGTATAAACTaGTGGATCATGTCTAGTTGTTTGTGTGTGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSVQMSDRSCIN*WIMSSCLCVSS Trigger: GGAGGACACACACAAACAACTAGACATGATCCAGCAGTTTATACAAGACCTGTCAGACATCTGGACAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063006.12 ENSMUST00000102612.2 ENSMUST00000154294.8 |
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