RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC40 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039963

Ensembl transcript IDs: ENSMUST00000053440.8, ENSMUST00000235971.2, ENSMUST00000236813.2

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACACCAGCTGCTCCTCGCGCTCATGCGTGACCTGGACCAGTTCCTaGTGCAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTG +
Preference number: 1 (lower is better)
Translates to: DTSCSSRSCVTWTSS*CRRNQVICASATPV
Trigger: CACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TGCAGCTCCTCCTCCTTCCTTCTCCGCTCACAGGCCACCAGAGAGTaGCGGTCATGGCTCTTCTCCAGCTGCATCTGCAGGCGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: CSSSSFLLRSQATRE*RSWLFSSCICRRAR
Trigger: CCTGGCCCGCCTGCAGATGCAGCTGGAGAAGAGCCATGACCGGCACTCTCTGGTGGCCTGTGAGCGGAGAAGGAAGGAGGAGGAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp ACCAGCTGCTCCTCGCGCTCATGCGTGACCTGGACCAGTTCCTGCTaGAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTGTTG +
Preference number: 1 (lower is better)
Translates to: TSCSSRSCVTWTSSC*RRNQVICASATPVL
Trigger: CAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp AGTTGGTCCACGGACACCAGCTGCTCCTCGCGCTCATGCGTGACCTaGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATCTGCGCCTCA +
Preference number: 1 (lower is better)
Translates to: SWSTDTSCSSRSCVT*TSSCCRRNQVICAS
Trigger: TGAGGCGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp TCTTCAGTTGGTCCACGGACACCAGCTGCTCCTCGCGCTCATGCGTaGCCTGGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATCTGCG +
Preference number: 1 (lower is better)
Translates to: SSVGPRTPAAPRAHA*PGPVPAAGATRSSA
Trigger: CGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp GCAGGCCCGGTGCTGTCTAGGAGGGCTCTGGGGTCTCCAGCTTGGTaGCGATCTTCTGTTGAATGCTCTGCAGCACCTCCTGGTACTGGG +
Preference number: 1 (lower is better)
Translates to: AGPVLSRRALGSPAW*RSSVECSAAPPGTG
Trigger: CCCAGTACCAGGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAGAGCCCTCCTAGACAGCACCGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TCCTTCTTCAGTTGGTCCACGGACACCAGCTGCTCCTCGCGCTCATaGGTGACCTGGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATC +
Preference number: 1 (lower is better)
Translates to: SFFSWSTDTSCSSRS*VTWTSSCCRRNQVI
Trigger: GATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGAAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp GCTGGGACCTGCTGTTGCGGTGCAGGAACACATATTTCCCCTCAATaGCGGCCTGCAGGTGCTTGCCACGGGTCTGCAGGGTCACGATCT +
Preference number: 1 (lower is better)
Translates to: AGTCCCGAGTHISPQ*RPAGACHGSAGSRS
Trigger: AGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTTCCTGCACCGCAACAGCAGGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp GGTGCAGGCCCGGTGCTGTCTAGGAGGGCTCTGGGGTCTCCAGCTTaGTGGCGATCTTCTGTTGAATGCTCTGCAGCACCTCCTGGTACT +
Preference number: 1 (lower is better)
Translates to: GAGPVLSRRALGSPA*WRSSVECSAAPPGT
Trigger: AGTACCAGGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAGAGCCCTCCTAGACAGCACCGGGCCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp AGGATGGTCTGGGTCCAGCACGATCAGCTGGGAGCCTTCCTCCTCTaGTTCATCACTCCCTTCAGTTGCTCTATCGAGCAGGGCCTCCGG +
Preference number: 1 (lower is better)
Translates to: RMVWVQHDQLGAFLL*FITPFSCSIEQGLR
Trigger: CCGGAGGCCCTGCTCGATAGAGCAACTGAAGGGAGTGATGAAGCAGAGGAGGAAGGCTCCCAGCTGATCGTGCTGGACCCAGACCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TCGTTCCTCATTGGCGGTCTGGCAGGTCTTGTTGTAGACGGAGCGTaGGCATTGCAGCTCCTCCTCCTTCCTTCTCCGCTCACAGGCCAC +
Preference number: 1 (lower is better)
Translates to: SFLIGGLAGLVVDGA*ALQLLLLPSPLTGH
Trigger: GTGGCCTGTGAGCGGAGAAGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTCTACAACAAGACCTGCCAGACCGCCAATGAGGAACGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TGCGTGACCTGGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATCTaGGCCTCAGCCACTCCCGTGTTGTACTCTTCTGTCAGCTTCGAC +
Preference number: 1 (lower is better)
Translates to: CVTWTSSCCRRNQVI*ASATPVLYSSVSFD
Trigger: GTCGAAGCTGACAGAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TCCATGATGTGCACCTCCTTCTTCAGTTGGTCCACGGACACCAGCTaGTCCTCGCGCTCATGCGTGACCTGGACCAGTTCCTGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: SMMCTSFFSWSTDTS*SSRSCVTWTSSCCR
Trigger: CCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp ACGCTCAGGCGCTTACGCTCCATCAGCTGGGACCTGCTGTTGCGGTaGAGGAACACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTTG +
Preference number: 1 (lower is better)
Translates to: TLRRLRSISWDLLLR*RNTYFPSMAACRCL
Trigger: CAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTTCCTGCACCGCAACAGCAGGTCCCAGCTGATGGAGCGTAAGCGCCTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp AGGAGGGCTCTGGGGTCTCCAGCTTGGTGGCGATCTTCTGTTGAATaGTCTGCAGCACCTCCTGGTACTGGGGGTAGTCTTCCTGCACGC +
Preference number: 1 (lower is better)
Translates to: RRALGSPAWWRSSVE*SAAPPGTGGSLPAR
Trigger: GCGTGCAGGAAGACTACCCCCAGTACCAGGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAGAGCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp CGCTCTAGGAGACACGTGGCTTTTTCAGAACATGTGGTGACTCCCTaGGTCTGCCCGCAAGTCAGCCCTGAAAGGTGCAGGCCCGGTGCT +
Preference number: 1 (lower is better)
Translates to: RSRRHVAFSEHVVTP*VCPQVSPERCRPGA
Trigger: AGCACCGGGCCTGCACCTTTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAAAAGCCACGTGTCTCCTAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR TCA 90 bp CTGGGTGTCGCTCTAGGAGACACGTGGCTTTTTCAGAACATGTGGTaGCTCCCTGGGTCTGCCCGCAAGTCAGCCCTGAAAGGTGCAGGC +
Preference number: 1 (lower is better)
Translates to: LGVALGDTWLFQNMW*LPGSARKSALKGAG
Trigger: GCCTGCACCTTTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAAAAGCCACGTGTCTCCTAGAGCGACACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR GCA 90 bp GTCTGCAGAGCCTCTTGCTTGCTTAAGCACTGGGCGGTCATTTTCTaGACCAGTGTGGCTTCTGTCTCTGCGCGGTTCAGGAGACGGGCC +
Preference number: 1 (lower is better)
Translates to: VCRASCLLKHWAVIF*TSVASVSARFRRRA
Trigger: GGCCCGTCTCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGCTCTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp GGTGCAGGAACACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTTaGCACGGGTCTGCAGGGTCACGATCTCCAGAAGGTTCTGCCGTT +
Preference number: 1 (lower is better)
Translates to: GAGTHISPQWRPAGA*HGSAGSRSPEGSAV
Trigger: AACGGCAGAACCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTTCCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp ATGTGGGCGTGCTCAGAGCGTCGGATCCGGTGGCTGCTTTACACCTaGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: MWACSERRIRWLLYT*CEQQRGFESRVWPA
Trigger: GGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGACGCTCTGAGCACGCCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 90 bp TCCACCATGGACATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTaGAAAGCCTGGCGTGTGGCCTGGAGCTCGCTCAAGACTGCCGAG +
Preference number: 1 (lower is better)
Translates to: STMDMSIFCRSSCSW*KAWRVAWSSLKTAE
Trigger: CTCGGCAGTCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACATGTCCATGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TTGAGCTGGGACAGCCGGACGCTCAGGCGCTTACGCTCCATCAGCTaGGACCTGCTGTTGCGGTGCAGGAACACATATTTCCCCTCAATG +
Preference number: 1 (lower is better)
Translates to: LSWDSRTLRRLRSIS*DLLLRCRNTYFPSM
Trigger: CATTGAGGGGAAATATGTGTTCCTGCACCGCAACAGCAGGTCCCAGCTGATGGAGCGTAAGCGCCTGAGCGTCCGGCTGTCCCAGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp CTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGCTaGTTCAGTAGCTGCCCGTGCCTAACCTTCATCCTGTGGATCTCG +
Preference number: 1 (lower is better)
Translates to: LRATANSMSRIIFSC*FSSCPCLTFILWIS
Trigger: CGAGATCCACAGGATGAAGGTTAGGCACGGGCAGCTACTGAAGCAGCAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTaGTGCTTCAGTAGCTGCCCGTGCCTAACCTTCATCCTGTGGATC +
Preference number: 1 (lower is better)
Translates to: SLRATANSMSRIIFS*CFSSCPCLTFILWI
Trigger: GATCCACAGGATGAAGGTTAGGCACGGGCAGCTACTGAAGCAGCAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp CTTCCTGGGAAATGGGGGCAGGAGAAGGCCGAGCTTTCTGTGGAGTaGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGC +
Preference number: 1 (lower is better)
Translates to: LPGKWGQEKAELSVE*RMRVSSGLQRAGTG
Trigger: GCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCACTCCACAGAAAGCTCGGCCTTCTCCTGCCCCCATTTCCCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 90 bp GGGGCTCTGCAGGCTCTGGGGGCTCTGTGGGCTCTATGGGTTCTATaGGCTCATATATGCCTTGCTGGAATGTGTCGGTTGATGTGGCTG +
Preference number: 1 (lower is better)
Translates to: GALQALGALWALWVL*AHICLAGMCRLMWL
Trigger: CAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGCCTGCAGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp CAGGCTTTGGGGGCTCTGCAGGCTCTGGGGGCTCTGTGGGCTCTATaGGTTCTATGGGCTCATATATGCCTTGCTGGAATGTGTCGGTTG +
Preference number: 1 (lower is better)
Translates to: QALGALQALGALWAL*VLWAHICLAGMCRL
Trigger: CAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGCCTGCAGAGCCCCCAAAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TCAGTTGCTCTATCGAGCAGGGCCTCCGGGCTGAGGCTCTGGACCTaGTCTAGGAACTGTATCCGGGTTTCTTCAAGGGCTCTGGGAGTT +
Preference number: 1 (lower is better)
Translates to: SVALSSRASGLRLWT*SRNCIRVSSRALGV
Trigger: AACTCCCAGAGCCCTTGAAGAAACCCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAGCCCGGAGGCCCTGCTCGATAGAGCAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp GACATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTGGAAAGCCTaGCGTGTGGCCTGGAGCTCGCTCAAGACTGCCGAGTGTTCCACA +
Preference number: 1 (lower is better)
Translates to: DMSIFCRSSCSWWKA*RVAWSSLKTAECST
Trigger: TGTGGAACACTCGGCAGTCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TTGTCCACCATGGACATGTCCATCTTTTGCCGTAGCTCCTGTTCCTaGTGGAAAGCCTGGCGTGTGGCCTGGAGCTCGCTCAAGACTGCC +
Preference number: 1 (lower is better)
Translates to: LSTMDMSIFCRSSCS*WKAWRVAWSSLKTA
Trigger: GGCAGTCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACATGTCCATGGTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp GGAAATGGGGGCAGGAGAAGGCCGAGCTTTCTGTGGAGTGGAGAATaGGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCA +
Preference number: 1 (lower is better)
Translates to: GNGGRRRPSFLWSGE*GYLLGFRGLEQAFP
Trigger: TGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCACTCCACAGAAAGCTCGGCCTTCTCCTGCCCCCATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR TCA 90 bp GCTCCAGCTCTTCCGAACTGCATCGGTTCTTGTCCAACAGCATGTTaGGCTTGCTCAGGTCGTTGTCCAGGTCCCTCATGTGGCGGCTCA +
Preference number: 1 (lower is better)
Translates to: APALPNCIGSCPTAC*ACSGRCPGPSCGGS
Trigger: TGAGCCGCCACATGAGGGACCTGGACAACGACCTGAGCAAGCTCAACATGCTGTTGGACAAGAACCGATGCAGTTCGGAAGAGCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp CACTCCCTGAGCGCATCCATCACTGTCTTGTATGCCTCGTTACGGTaGTTCATGCCCACTAGGCTGGTGGTCCACTGCTGTAGGATTCGC +
Preference number: 1 (lower is better)
Translates to: HSLSASITVLYASLR*FMPTRLVVHCCRIR
Trigger: GCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACAAGACAGTGATGGATGCGCTCAGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TCCTCCGTGTCCTGCAGGGCGAGCTGGTACGTGTTAAACTCCGTCTaGAGAGCCTCTTGCTTGCTTAAGCACTGGGCGGTCATTTTCTGC +
Preference number: 1 (lower is better)
Translates to: SSVSCRASWYVLNSV*RASCLLKHWAVIFC
Trigger: GCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGCTCTGCAGACGGAGTTTAACACGTACCAGCTCGCCCTGCAGGACACGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp ACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTTGCCACGGGTCTaGAGGGTCACGATCTCCAGAAGGTTCTGCCGTTTGAGAGCTGTT +
Preference number: 1 (lower is better)
Translates to: TYFPSMAACRCLPRV*RVTISRRFCRLRAV
Trigger: AACAGCTCTCAAACGGCAGAACCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp CCTCTTGCTTGCTTAAGCACTGGGCGGTCATTTTCTGCACCAGTGTaGCTTCTGTCTCTGCGCGGTTCAGGAGACGGGCCAGCTTCTCAT +
Preference number: 1 (lower is better)
Translates to: PLACLSTGRSFSAPV*LLSLRGSGDGPASH
Trigger: ATGAGAAGCTGGCCCGTCTCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp GACACCATCTGTTCCAGCTGCTTGTTGAAGAAGTTGATGAGGCTCTaGTTCCTCTCAATGAGGATGGTGCGCCGGGCGATCTCGCTCTCG +
Preference number: 1 (lower is better)
Translates to: DTICSSCLLKKLMRL*FLSMRMVRRAISLS
Trigger: CGAGAGCGAGATCGCCCGGCGCACCATCCTCATTGAGAGGAAGCAGAGCCTCATCAACTTCTTCAACAAGCAGCTGGAACAGATGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp ATGCGAAGCTTCTTTTGTTCCATGATGTGCACCTCCTTCTTCAGTTaGTCCACGGACACCAGCTGCTCCTCGCGCTCATGCGTGACCTGG +
Preference number: 1 (lower is better)
Translates to: MRSFFCSMMCTSFFS*STDTSCSSRSCVTW
Trigger: CCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGCTTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TGCCCGGTCTCAGAATCCACCGAGCTGCGCATCTCCTTGGCCAGTTaGATTTTCTTCTCCCACAGCATGATTTGGTGCTCTGCCTCCATG +
Preference number: 1 (lower is better)
Translates to: CPVSESTELRISLAS*IFFSHSMIWCSASM
Trigger: CATGGAGGCAGAGCACCAAATCATGCTGTGGGAGAAGAAAATCCAACTGGCCAAGGAGATGCGCAGCTCGGTGGATTCTGAGACCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp CTGAGATGGTGTTGGTGCAGTCATCTGTGGCCTTGTGCATCTCCCTaGCTTTCTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCT +
Preference number: 1 (lower is better)
Translates to: LRWCWCSHLWPCASP*LSSAARAAGSGTLS
Trigger: AGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGGCCACAGATGACTGCACCAACACCATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TTTCACACCCAGGTAATGTGGGCGTGCTCAGAGCGTCGGATCCGGTaGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCA +
Preference number: 1 (lower is better)
Translates to: FHTQVMWACSERRIR*LLYTWCEQQRGFES
Trigger: TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGACGCTCTGAGCACGCCCACATTACCTGGGTGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 90 bp CTGTCTTGTATGCCTCGTTACGGTGCTTCATGCCCACTAGGCTGGTaGTCCACTGCTGTAGGATTCGCTTCTTCTCCACGGCAATGGTGT +
Preference number: 1 (lower is better)
Translates to: LSCMPRYGASCPLGW*STAVGFASSPRQWC
Trigger: ACACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACAAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TCACTGTCTTGTATGCCTCGTTACGGTGCTTCATGCCCACTAGGCTaGTGGTCCACTGCTGTAGGATTCGCTTCTTCTCCACGGCAATGG +
Preference number: 1 (lower is better)
Translates to: SLSCMPRYGASCPLG*WSTAVGFASSPRQW
Trigger: CCATTGCCGTGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACAAGACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TACGTGTTAAACTCCGTCTGCAGAGCCTCTTGCTTGCTTAAGCACTaGGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTCTCTGCGCGG +
Preference number: 1 (lower is better)
Translates to: YVLNSVCRASCLLKH*AVIFCTSVASVSAR
Trigger: CCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGCTCTGCAGACGGAGTTTAACACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp TATGCCTCGTTACGGTGCTTCATGCCCACTAGGCTGGTGGTCCACTaGTGTAGGATTCGCTTCTTCTCCACGGCAATGGTGTCAATCTCT +
Preference number: 1 (lower is better)
Translates to: YASLRCFMPTRLVVH*CRIRFFSTAMVSIS
Trigger: AGAGATTGACACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TGGAATCTGATCATCAGAGGATGGTCTGGGTCCAGCACGATCAGCTaGGAGCCTTCCTCCTCTGCTTCATCACTCCCTTCAGTTGCTCTA +
Preference number: 1 (lower is better)
Translates to: WNLIIRGWSGSSTIS*EPSSSASSLPSVAL
Trigger: TAGAGCAACTGAAGGGAGTGATGAAGCAGAGGAGGAAGGCTCCCAGCTGATCGTGCTGGACCCAGACCATCCTCTGATGATCAGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp AACAGGGCGATGTTTTCTTCTAGCTGGTGTGACCTTTCGGTGAGCTaGTCCACAAACAGGTCCTGCTTTTTCTTCTCCACCTCGGCGTGC +
Preference number: 1 (lower is better)
Translates to: NRAMFSSSWCDLSVS*STNRSCFFFSTSAC
Trigger: GCACGCCGAGGTGGAGAAGAAAAAGCAGGACCTGTTTGTGGACCAGCTCACCGAAAGGTCACACCAGCTAGAAGAAAACATCGCCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp CCTCAAACAGGGCGATGTTTTCTTCTAGCTGGTGTGACCTTTCGGTaGGCTGGTCCACAAACAGGTCCTGCTTTTTCTTCTCCACCTCGG +
Preference number: 1 (lower is better)
Translates to: PQTGRCFLLAGVTFR*AGPQTGPAFSSPPR
Trigger: CCGAGGTGGAGAAGAAAAAGCAGGACCTGTTTGTGGACCAGCTCACCGAAAGGTCACACCAGCTAGAAGAAAACATCGCCCTGTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp ACTGCTTTCTTGAGGACCCGGGTGTCCTCAGCCTGGGACAAGTATTaGGCCTCAAACAGGGCGATGTTTTCTTCTAGCTGGTGTGACCTT +
Preference number: 1 (lower is better)
Translates to: TAFLRTRVSSAWDKY*ASNRAMFSSSWCDL
Trigger: AAGGTCACACCAGCTAGAAGAAAACATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGCTGAGGACACCCGGGTCCTCAAGAAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp GGTTCAGGAGACGGGCCAGCTTCTCATTCTTCTCTTCCTCCTGCATaGTGGACTTCTTGCAGACTTCGATCTCACTGTCGGTGGACTTCA +
Preference number: 1 (lower is better)
Translates to: GSGDGPASHSSLPPA*WTSCRLRSHCRWTS
Trigger: TGAAGTCCACCGACAGTGAGATCGAAGTCTGCAAGAAGTCCATCATGCAGGAGGAAGAGAAGAATGAGAAGCTGGCCCGTCTCCTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp GGGGGCTCTGTGGGCTCTATGGGTTCTATGGGCTCATATATGCCTTaGTGGAATGTGTCGGTTGATGTGGCTGAGACGTTTGTGTCATCT +
Preference number: 1 (lower is better)
Translates to: GGSVGSMGSMGSYMP*WNVSVDVAETFVSS
Trigger: AGATGACACAAACGTCTCAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCACAGAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp CCTTTTGCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTaGTGGAGGTCCCCTGTTCCTGCAGCTTGTCCACCATGGACATGT +
Preference number: 1 (lower is better)
Translates to: PFAASEGADESTWSS*WRSPVPAACPPWTC
Trigger: ACATGTCCATGGTGGACAAGCTGCAGGAACAGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp ATCTGTGTCTGGAGCGGTCTCTCCAATGAATTCCACTTCTGTTTCTaGGGGAGTCTCTCCATTGGACCCCACTTCTCCTTCAGAGATGGC +
Preference number: 1 (lower is better)
Translates to: ICVWSGLSNEFHFCF*GSLSIGPHFSFRDG
Trigger: GCCATCTCTGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCCCAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTCCAGACACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp TTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTaGTGTGACCGTAGGACTGCCAACAGGATGGTTTTAAGTCCAACA +
Preference number: 1 (lower is better)
Translates to: LLRKIEGLSQDSERH*CDRRTANRMVLSPT
Trigger: TGTTGGACTTAAAACCATCCTGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR GCA 90 bp GCTGTTAGCTGGTTGATCTCCTCTTCAAGAACATCTGTGGTAGCCTaGATTTCTGACAGCAGTTGCTGCTTCTCCTGGAGGGAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: AVSWLISSSRTSVVA*ISDSSCCFSWRELL
Trigger: AAGCAGCTCCCTCCAGGAGAAGCAGCAACTGCTGTCAGAAATGCAGGCTACCACAGATGTTCTTGAAGAGGAGATCAACCAGCTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp GTCTGTTCCTGGGGAGGTCTCTCCAATGAATTCCACATCTGTGTCTaGAGCGGTCTCTCCAATGAATTCCACTTCTGTTTCTGGGGGAGT +
Preference number: 1 (lower is better)
Translates to: VCSWGGLSNEFHICV*SGLSNEFHFCFWGS
Trigger: ACTCCCCCAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTCCAGACACAGATGTGGAATTCATTGGAGAGACCTCCCCAGGAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp AGGGTGGCCTTTTCCTCAGAGAGTTCCATCAGCTTTTCCTGCATTTaGATGGTCTCTCTTTCTGAGTCCTTCAGCGTGCGCAGAAACTCC +
Preference number: 1 (lower is better)
Translates to: RVAFSSESSISFSCI*MVSLSESFSVRRNS
Trigger: GGAGTTTCTGCGCACGCTGAAGGACTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCTGATGGAACTCTCTGAGGAAAAGGCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp GCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTGCATTACTTaGTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACT +
Preference number: 1 (lower is better)
Translates to: AQISPPYSWLLLCIT*SAKLRVCPRTVRGT
Trigger: AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 90 bp GCTGGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTaGCTTCTTCTCTGCATTACTTGCTCCGCAAAATTGAGGGTCTGT +
Preference number: 1 (lower is better)
Translates to: AGTGIPRAQISPPYS*LLLCITCSAKLRVC
Trigger: ACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR TCA 90 bp GTCTATTCCTCGGAGGGCCTTCCTAATGGAGTCCACGTCTGTTTCTaGGGTTTCTTCTCCGATGGATTCAACGTTGAGTTCTGTCATGGT +
Preference number: 1 (lower is better)
Translates to: VYSSEGLPNGVHVCF*GFFSDGFNVEFCHG
Trigger: ACCATGACAGAACTCAACGTTGAATCCATCGGAGAAGAAACCTCAGAAACAGACGTGGACTCCATTAGGAAGGCCCTCCGAGGAATAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 90 bp CTGCCAGCGTCTTCTTATGCATGTCTATTTTGCAGTTGGTGTTGGTaGTGTCCAGGGTGGCCTGGGCGATATCGCCGTCAATTTTTGAAA +
Preference number: 1 (lower is better)
Translates to: LPASSYACLFCSWCW*CPGWPGRYRRQFLK
Trigger: TTTCAAAAATTGACGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 90 bp TCAGAGAGCTCATCCAACTCATCGAGAAGGGCTTCTACTTTCTCGTaGTCAGAAACTTCTAATTCTCCTTCTGGGGCAGCTCTTCCAGTG +
Preference number: 1 (lower is better)
Translates to: SESSSNSSRRASTFS*SETSNSPSGAALPV
Trigger: CACTGGAAGAGCTGCCCCAGAAGGAGAATTAGAAGTTTCTGACCACGAGAAAGTAGAAGCCCTTCTCGATGAGTTGGATGAGCTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 90 bp GTTGGTGATGAGATCGTTGAACCTCTTTACCTCCTTGTCCATCTCTaGCAGCGTCTTCTTATGCATGTCTATTTTGCAGTTGGTGTTGGT +
Preference number: 1 (lower is better)
Translates to: VGDEIVEPLYLLVHL*QRLLMHVYFAVGVG
Trigger: ACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp GCCCGCAAGTCAGCCCTGAAAGGTGCAGGCCCGGTGCTGTCTAGGAGGGCTCTGGTGACTCCCTGGGTCTaGCCGCAAGTCAGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: ARKSALKGAGPVLSRRALVTPWV*PQVSPE
Trigger: TTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCAC...CAGAGCCCTCCTAGACAGCACCGGGCCTGCACCTTTCAGGGCTGACTTGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp GCCCGCAAGTCAGCCCTGAAAGGTGCAGGCCCGGTGCTGTCTAGGAGGGCTCTGTTCACGCCCAGCTCCTaGCTCTGGCTTCGGGTTTGC +
Preference number: 2 (lower is better)
Translates to: ARKSALKGAGPVLSRRALFTPSS*LWLRVC
Trigger: GCAAACCCGAAGCCAGAGGCAGGAGCTGGGCGTGAA...CAGAGCCCTCCTAGACAGCACCGGGCCTGCACCTTTCAGGGCTGACTTGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp CTCATTGGCGGTCTGGCAGGTCTTGTTGTAGACGGAGCGTGCGCATaGCAGCTCCTCCTCCTTCCTTCTCCGCTCACAGGCCACCAGAGA +
Preference number: 2 (lower is better)
Translates to: LIGGLAGLVVDGACA*QLLLLPSPLTGHQR
Trigger: TCTCTGGTGGCCTGTGAGCGGAGAAGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTCTACAACAAGACCTGCCAGACCGCCAATGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp CGGTGCAGGAACACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTaGCCACGGGTCTGCAGGGTCACGATCTCCAGAAGGTTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: RCRNTYFPSMAACRC*PRVCRVTISRRFCR
Trigger: ACGGCAGAACCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTTCCTGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp ACTGGGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTCTCTGCGCGGTTCAGGAAGGCTTTGGGGGCTCTaGAGGCTCTGGGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: TGRSFSAPVWLLSLRGSGRLWGL*RLWGLC
Trigger: ACAGAGCCCCCAGAGCCTGCAGAGCCCCCAAAGCCT...TCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GATGGTCTCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGCGCTCATGCGTGACCTaGACCAGTTCCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: DGLPAGHSQLHVTDHLLLRSCVT*TSSCCR
Trigger: CCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCG...CAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp CTCCTGCCTCTGGCTTCGGGTTTGCTTGGTGGCCACATCCAGCTCTaGGACGTCCAGCTTCAGTTTGTCCATCTGCCGGTTGAGGTAGCC +
Preference number: 2 (lower is better)
Translates to: LLPLASGLLGGHIQL*DVQLQFVHLPVEVA
Trigger: GGCTACCTCAACCGGCAGATGGACAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCCACCAAGCAAACCCGAAGCCAGAGGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp CTCCCTGACTTTCTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCTTGGTTGGCTCTTCTCCAGCTaGATCTGCAGGCGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LPDFLLQLALLVVELCLGWLFSS*ICRRAR
Trigger: CCTGGCCCGCCTGCAGATGCAGCTGGAGAAGAGCCA...ACCAAGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAGAAAGTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TGTCTAGGAGGGCTCTGGGGTCTCCAGCTTGGTGGCGATCTTCTGTaGAATGCTCTGCAGCACCTCCTGGTACTGGGGGTAGTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: CLGGLWGLQLGGDLL*NALQHLLVLGVVFL
Trigger: CAGGAAGACTACCCCCAGTACCAGGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAGAGCCCTCCTAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACATTTCAGAACATGTGGTaGCTCCCTGGGTCTGCCCGC +
Preference number: 2 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTFQNMW*LPGSAR
Trigger: GCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAA...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CCA 90 bp ACTGGGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTCTCTGCGCGGTTCAGGAGAGCGTCGGATCCGGTaGCTGCTTTACACCTGGTGT +
Preference number: 2 (lower is better)
Translates to: TGRSFSAPVWLLSLRGSGERRIR*LLYTWC
Trigger: ACACCAGGTGTAAAGCAGCCACCGGATCCGACGCTC...TCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GATGGTCTCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGCTGAGGCTCTGGACCTaGTCTAGGAACTGTATCCGG +
Preference number: 2 (lower is better)
Translates to: DGLPAGHSQLHVTDHLLLLRLWT*SRNCIR
Trigger: CCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAG...CAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp CTGCAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTGTTGTACTCTTCACTTGGTCATCTTGCTaGAGGTCCCCTGTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: LQAQPGHLRLSHSRVVLFTWSSC*RSPVPA
Trigger: TGCAGGAACAGGGGACCTCCAGCAAGATGACCAAGT...GAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TGCTGCAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTGTaGTACTCTTCTGTCAGCTTCGACAGCCTTTTGATCTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: CCRRNQVICASATPV*YSSVSFDSLLISSS
Trigger: GGAACTGGAGATCAAAAGGCTGTCGAAGCTGACAGAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp TGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCAGGGACAGTGAGAGGCACTaGTGTGACCGTAGGACTGCC +
Preference number: 2 (lower is better)
Translates to: WRMRVSSGLQRAGTGIPRDSERH*CDRRTA
Trigger: GGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTC...CCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR GCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGGTGACTCCCTGGGTCTaGCCGCAAGTCAGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVVTPWV*PQVSPE
Trigger: TTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCAC...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CCA 90 bp ATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTGGAAAGCCTGGCGTGTGGCCAGAGAGTGCCGGTCATaGCTCTTCTCCAGCTGCATC +
Preference number: 2 (lower is better)
Translates to: MSIFCRSSCSWWKAWRVARECRS*LFSSCI
Trigger: GATGCAGCTGGAGAAGAGCCATGACCGGCACTCTCT...GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp CTGCAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTGTTGTACTCTTCGCAGCTTGTCCACCATaGACATGTCCATCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: LQAQPGHLRLSHSRVVLFAACPP*TCPSFA
Trigger: GGCAAAAGATGGACATGTCCATGGTGGACAAGCTGC...GAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp GGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTaGAATCACGTGTCTGGCCTGCCGGTGTTTCTTAGACTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: GSGGCFTPGVNSREA*NHVSGLPVFLRLGV
Trigger: GACACCCAGTCTAAGAAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR TCA 90 bp TGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCAGGCTTGCTCCGCAAAATTaGGGGTCTGTCCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: WRMRVSSGLQRAGTGIPRLAPQN*GSVPGQ
Trigger: CTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAG...CCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACATGGCTGCTTTACACCTaGTGTGAACAGCAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTWLLYT*CEQQRG
Trigger: GCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCA...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 90 bp AGGGCGAGCTGGTACGTGTTAAACTCCGTCTGCAGAGCCTCTTGCTaGCTTAAGCACTGGGCGGTCATTTTCTGCACCAGTGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RASWYVLNSVCRASC*LKHWAVIFCTSVAS
Trigger: AGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGCTCTGCAGACGGAGTTTAACACGTACCAGCTCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp ATGGTGCGCCGGGCGATCTCGCTCTCGCTGTTGGTGATGAGATCGTaGAACCTCTTTACCTCCTTGTCCATCTCTGCCAGCGTCTTCTTA +
Preference number: 2 (lower is better)
Translates to: MVRRAISLSLLVMRS*NLFTSLSISASVFL
Trigger: TAAGAAGACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAGCGAGAGCGAGATCGCCCGGCGCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TATGCGAAGCTTCTTTTGTTCCATGATGTGCACCTCCTTCTTCAGTaGGTCCACGGACACCAGCTGCTCCTCGCGCTCATGCGTGACCTG +
Preference number: 2 (lower is better)
Translates to: YAKLLLFHDVHLLLQ*VHGHQLLLALMRDL
Trigger: CAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGCTTCGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp ATGGTCTCTCTTTCTGAGTCCTTCAGCGTGCGCAGAAACTCCGTCTCAGTTGCTTTTCAGAACATGTGGTaGCTCCCTGGGTCTGCCCGC +
Preference number: 2 (lower is better)
Translates to: MVSLSESFSVRRNSVSVAFQNMW*LPGSAR
Trigger: GCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAA...AGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAGAAAGAGAGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTGCTGGAGGTCCCCTGCCTGGGACAAGTATTaGGCCTCAAACAGGGCGATG +
Preference number: 2 (lower is better)
Translates to: AASEGADESTWSSCWRSPAWDKY*ASNRAM
Trigger: CATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGC...AGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp TTCCTCACCACCTGCTTCATGACTTGGATGTCATCGCGCACGTCCTGCTCTATGCTCTCCACCTCTGTCTaGAGGGCGGCCAACTTCTTT +
Preference number: 2 (lower is better)
Translates to: FLTTCFMTWMSSRTSCSMLSTSV*RAANFF
Trigger: AAAGAAGTTGGCCGCCCTGCAGACAGAGGTGGAGAG...CATAGAGCAGGACGTGCGCGATGACATCCAAGTCATGAAGCAGGTGGTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp CTCTTGGACGTCCAGCTTCAGTTTGTCCATCTGCCGGTTGAGGTAGCCCTTCAGTGGCTGCTTTACACCTaGTGTGAACAGCAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: LLDVQLQFVHLPVEVALQWLLYT*CEQQRG
Trigger: GCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCA...CTGAAGGGCTACCTCAACCGGCAGATGGACAAACTGAAGCTGGACGTCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp CTCCTCCTTCCTTCTCCGCTCACAGGCCACCAGAGAGTGCCGGTCATGGCTCTTGAGCTTTCTGTGGAGTaGAGAATGAGGGTATCTTCT +
Preference number: 2 (lower is better)
Translates to: LLLPSPLTGHQRVPVMALELSVE*RMRVSS
Trigger: AGAAGATACCCTCATTCTCCACTCCACAGAAAGCTC...AAGAGCCATGACCGGCACTCTCTGGTGGCCTGTGAGCGGAGAAGGAAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp ATGGTCTCTCTTTCTGAGTCCTTCAGCGTGCGCAGAAACTCCGTCTCAGTTGCTGCTCTGGGGGCTCTGTaGGCTCTATGGGTTCTATGG +
Preference number: 2 (lower is better)
Translates to: MVSLSESFSVRRNSVSVAALGAL*ALWVLW
Trigger: CCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGC...AGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAGAAAGAGAGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TTCCTCTCAATGAGGATGGTGCGCCGGGCGATCTCGCTCTCGCTGTaGGTGATGAGATCGTTGAACCTCTTTACCTCCTTGTCCATCTCT +
Preference number: 2 (lower is better)
Translates to: FLSMRMVRRAISLSL*VMRSLNLFTSLSIS
Trigger: AGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAGCGAGAGCGAGATCGCCCGGCGCACCATCCTCATTGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTGCTGGAGGTCCCCTTCACCACCTGCTTCATaGCTTGGATGTCATCGCGCA +
Preference number: 2 (lower is better)
Translates to: AASEGADESTWSSCWRSPSPPAS*LGCHRA
Trigger: TGCGCGATGACATCCAAGTCATGAAGCAGGTGGTGA...AGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp GATGGTCTCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGGGCTCATATATGCCTTaGTGGAATGTGTCGGTTGAT +
Preference number: 2 (lower is better)
Translates to: DGLPAGHSQLHVTDHLLLGSYMP*WNVSVD
Trigger: ATCAACCGACACATTCCAGCAAGGCATATATGAGCC...CAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGAGCGTCGGATCCGGTaGCTGCTTTACACCTGGTGT +
Preference number: 2 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDERRIR*LLYTWC
Trigger: ACACCAGGTGTAAAGCAGCCACCGGATCCGACGCTC...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CCA 90 bp CTCCCTGACTTTCTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCTTGGTAAGGAAAAAGGTAACTaGTGCCCAGAAACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LPDFLLQLALLVVELCLGKEKGN*CPETPG
Trigger: CCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTT...ACCAAGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAGAAAGTCAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTGCTGGAGGTCCCCTTTTTCTGCACCAGTGTaGCTTCTGTCTCTGCGCGGT +
Preference number: 2 (lower is better)
Translates to: AASEGADESTWSSCWRSPFSAPV*LLSLRG
Trigger: ACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAA...AGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp CCACCTTACTCCTGGCTTCTTCTCTGCATTACTTGCTCCGCAAAATaGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTA +
Preference number: 2 (lower is better)
Translates to: PPYSWLLLCITCSAK*RVCPRTVRGTDVTV
Trigger: TACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 90 bp TTGTCCATCTCTGCCAGCGTCTTCTTATGCATGTCTATTTTGCAGTaGGTGTTGGTGATGTCCAGGGTGGCCTGGGCGATATCGCCGTCA +
Preference number: 2 (lower is better)
Translates to: LSISASVFLCMSILQ*VLVMSRVAWAISPS
Trigger: TGACGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGATGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp ACCTCCTTGTCCATCTCTGCCAGCGTCTTCTTATGCATGTCTATTTaGCAGTTGGTGTTGGTGATGTCCAGGGTGGCCTGGGCGATATCG +
Preference number: 2 (lower is better)
Translates to: TSLSISASVFLCMSI*QLVLVMSRVAWAIS
Trigger: CGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGATGGACAAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp TGCTGTAGGATTCGCTTCTTCTCCACGGCAATGGTGTCAATCTCTGTGATGGCCCCATCTCCAAGGGACTaGTGTCAGAGTAGGAGACCT +
Preference number: 2 (lower is better)
Translates to: CCRIRFFSTAMVSISVMAPSPRD*CQSRRP
Trigger: AGGTCTCCTACTCTGACATCAGTCCCTTGGAGATGG...GGCCATCACAGAGATTGACACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GATGGTCTCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGATCGCCGTCAATTTTTaGAAGATGTGTCACCAGGTT +
Preference number: 2 (lower is better)
Translates to: DGLPAGHSQLHVTDHLLLIAVNF*KMCHQV
Trigger: AACCTGGTGACACATCTTTCAAAAATTGACGGCGAT...CAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GATGGTCTCCCTGCGGGCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTGAGCTTTTCCTGCATTTaGATGGTCTCTCTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: DGLPAGHSQLHVTDHLLLSFSCI*MVSLSE
Trigger: CTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCT...CAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCATCACGTGTCTGGCCTaGCGGTGTTTCTTAGACTGG +
Preference number: 2 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLITCLA*RCFLDW
Trigger: CCAGTCTAAGAAACACCGGCAGGCCAGACACGTGAT...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR GCA 90 bp TGCTGTAGGATTCGCTTCTTCTCCACGGCAATGGTGTCAATCTCTGTGATGGCCATCACTCCCTTCAGTTaGTCTATCGAGCAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: CCRIRFFSTAMVSISVMAITPFS*SIEQGL
Trigger: GAGGCCCTGCTCGATAGAGCAACTGAAGGGAGTGAT...GGCCATCACAGAGATTGACACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp GGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTGCATTACTaGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: GSNKSTLLLASSLHY*LRKIEGLSQDSERH
Trigger: GTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 90 bp GTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTaGTCCAACAGCATGTTGAGCTTGCTCAGGTCGTTGTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: VAILFCSSSSELHRF*SNSMLSLLRSLSRS
Trigger: GGACCTGGACAACGACCTGAGCAAGCTCAACATGCTGTTGGACAAGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TCTGAGTCCTTCAGCGTGCGCAGAAACTCCGTCTCAGTTGCTATATaGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: SESFSVRRNSVSVAI*FCSSSSELHRFLSN
Trigger: GTTGGACAAGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TTCTTCTCCCACAGCATGATTTGGTGCTCTGCCTCCATGAAGCTGTaGAGGAGGGTGGCCTTTTCCTCAGAGAGTTCCATCAGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: FFSHSMIWCSASMKL*RRVAFSSESSISFS
Trigger: GGAAAAGCTGATGGAACTCTCTGAGGAAAAGGCCACCCTCCTCAACAGCTTCATGGAGGCAGAGCACCAAATCATGCTGTGGGAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTGCTGGAGGTCCCCTGAGCGGTCTCTCCAATaGATTCCACTTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: AASEGADESTWSSCWRSPERSLQ*IPLLFL
Trigger: CAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTC...AGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp TGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCAGGAGTCCACCTTACTCCTaGCTTCTTCTCTGCATTACT +
Preference number: 2 (lower is better)
Translates to: WRMRVSSGLQRAGTGIPRSPPYS*LLLCIT
Trigger: AGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACT...CCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CCA 90 bp CCTCAGCCTGGGACAAGTATTGAGCCTCAAACAGGGCGATGTTTTCTTCTAGCTGCCACATCCAGCTCTTaGACGTCCAGCTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: PQPGTSIEPQTGRCFLLAATSSS*TSSFSL
Trigger: CAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGC...AGCTAGAAGAAAACATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TCTCTCTTTCTGAGTCCTTCAGCGTGCGCAGAAACTCCGTCTCAGTaGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCT +
Preference number: 2 (lower is better)
Translates to: SLFLSPSACAETPSQ*LYCSAPALPNCIGS
Trigger: AGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAGAAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCATGCAGTTGGTGTTGGTaGTGTCCAGGGTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPCSWCW*CPGWPG
Trigger: CCCAGGCCACCCTGGACATCACCAACACCAACTGCA...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp CTCCCTGACTTTCTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCTTGGTTCTCATGTGCAATCTTaGTCTCTATGCGAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: LPDFLLQLALLVVELCLGSHVQS*SLCEAS
Trigger: AGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGA...ACCAAGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAGAAAGTCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCAAGCTCCTGTTCCTGGTaGAAAGCCTGGCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPSSCSW*KAWRVA
Trigger: GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCT...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp CTATGGGTTCTATGGGCTCATATATGCCTTGCTGGAATGTGTCGGTaGATGTGGCTGAGACGTTTGTGTCATCTTCACCCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LWVLWAHICLAGMCR*MWLRRLCHLHPSPR
Trigger: CCTTGGAGATGGGTGAAGATGACACAAACGTCTCAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp ATCTCTGCCAGCGTCTTCTTATGCATGTCTATTTTGCAGTTGGTGTaGGTGATGTCCAGGGTGGCCTGGGCGATATCGCCGTCAATTTTT +
Preference number: 2 (lower is better)
Translates to: ISASVFLCMSILQLV*VMSRVAWAISPSIF
Trigger: AAAAATTGACGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TCGCTCTCGCTGTTGGTGATGAGATCGTTGAACCTCTTTACCTCCTaGTCCATCTCTGCCAGCGTCTTCTTATGCATGTCTATTTTGCAG +
Preference number: 2 (lower is better)
Translates to: SLSLLVMRSLNLFTS*SISASVFLCMSILQ
Trigger: CTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAGCGAGAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp TTAGGAACTTTTGAGTTTCTTCCAGTTCTGAGATGGTGTTGGTGCAGTCATCTGGATGCTGACACTCCCTaGGCGCATCCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: LGTFEFLPVLRWCWCSHLDADTP*AHPSLS
Trigger: AGACAGTGATGGATGCGCTCAGGGAGTGTCAGCATC...CAGATGACTGCACCAACACCATCTCAGAACTGGAAGAAACTCAAAAGTTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp CTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCTTGGTGATTACTTTCTTCTTCTCTGCATTACTTaGTCCGCAAAATTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: LLQLALLVVELCLGDYFLLLCIT*SAKLRV
Trigger: GACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAG...AAGAAAGTAATCACCAAGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp CGTCTCAGTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTTGTCTTCCTCACCACCTaGTTCATGACTTGGATGTCA +
Preference number: 2 (lower is better)
Translates to: RLSCYIVLLQLFRTASVLVFLTT*FMTWMS
Trigger: TGACATCCAAGTCATGAAGCAGGTGGTGAGGAAGAC...AAGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp AACTCCGTCTCAGTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTTCTCTTCCTCCTaGATGATGGACTTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: NSVSVAILFCSSSSELHRFFSSS*MMDFLQ
Trigger: CTGCAAGAAGTCCATCATGCAGGAGGAAGAGAAGAA...CCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCAGGCATTTGCTATCCTTaGACTTCTGGGTCCCACGGC +
Preference number: 2 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPGICYP*TSGSHG
Trigger: GCCGTGGGACCCAGAAGTCCAAGGATAGCAAATGCC...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCAGGGGAGTCTCTCCATTaGACCCCACTTCTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPGESLH*TPLLLQ
Trigger: CTGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCC...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp TTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTaGTTCCATGATGTGCACCTCCTTCTTCAGTTGGTCCACGGACAC +
Preference number: 2 (lower is better)
Translates to: FLLLMCNLALYAKLL*FHDVHLLLQLVHGH
Trigger: GTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR TCA 90 bp TTAGGAACTTTTGAGTTTCTTCCAGTTCTGAGATGGTGTTGGTGCAGTCATCTGTCTTCTCCCACAGCATaGTTTGGTGCTCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LGTFEFLPVLRWCWCSHLSSPTA*FGALPP
Trigger: TGGAGGCAGAGCACCAAATCATGCTGTGGGAGAAGA...CAGATGACTGCACCAACACCATCTCAGAACTGGAAGAAACTCAAAAGTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR GCA 90 bp AACTCCGTCTCAGTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCCTTCTTCTCATGTaGAATCTTGCTCTCTATGCG +
Preference number: 2 (lower is better)
Translates to: NSVSVAILFCSSSSELHRFLLLM*NLALYA
Trigger: CGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAA...CCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp GAGTCCACGTCTGTTTCTGAGGTTTCTTCTCCGATGGATTCAACGTaGAGTTCTGTCATGGTCTTTTTAATGGGTTCCACGTCCATTCCT +
Preference number: 2 (lower is better)
Translates to: ESTSVSEVSSPMDST*SSVMVFLMGSTSIP
Trigger: AGGAATGGACGTGGAACCCATTAAAAAGACCATGACAGAACTCAACGTTGAATCCATCGGAGAAGAAACCTCAGAAACAGACGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 90 bp ATGTGGCGGCTCACTATCTTTTGTTCCTTCTTCTCATGTGCAATCTaGCTCTCTATGCGAAGCTTCTTTTGTTCCATGATGTGCACCTCC +
Preference number: 2 (lower is better)
Translates to: MWRLTIFCSFFSCAI*LSMRSFFCSMMCTS
Trigger: GGAGGTGCACATCATGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAACAAAAGATAGTGAGCCGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp CGTCTCAGTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTTTCATATATGCCTTGCTaGAATGTGTCGGTTGATGTG +
Preference number: 2 (lower is better)
Translates to: RLSCYIVLLQLFRTASVLSYMPC*NVSVDV
Trigger: CACATCAACCGACACATTCCAGCAAGGCATATATGA...AAGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CCA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCATTCCACTTCTGTTTCTaGGGGAGTCTCTCCATTGGA +
Preference number: 2 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPFHFCF*GSLSIG
Trigger: TCCAATGGAGAGACTCCCCCAGAAACAGAAGTGGAA...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp ACGGACACCAGCTGCTCCTCGCGCTCATGCGTGACCTaGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATC +
Preference number: 3 (lower is better)
Translates to: TDTSCSSRSCVT*TSSCCRRNQVI
Trigger: GATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCGCGAGGAGCAGCTGGTGTCCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp AGGTTCACGCCCAGCTCCTGCCTCTGGCTTCGGGTTTaGTTGGTGGCCACATCCAGCTCTTGGACGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RFTPSSCLWLRV*LVATSSSWTSS
Trigger: GCTGGACGTCCAAGAGCTGGATGTGGCCACCAAGCAAACCCGAAGCCAGAGGCAGGAGCTGGGCGTGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp CCCTCAATGGCGGCCTGCAGGTGCTTGCCACGGGTCTaGAGGGTCACGATCTCCAGAAGGTTCTGCCGTTTG +
Preference number: 3 (lower is better)
Translates to: PSMAACRCLPRV*RVTISRRFCRL
Trigger: CAAACGGCAGAACCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp GCCGTAGCTCCTGTTCCTGGTGGAAAGCCTGGCGTGTaGCCTGGAGCTCGCTCAAGACTGCCGAGTGTTCCA +
Preference number: 3 (lower is better)
Translates to: AVAPVPGGKPGV*PGARSRLPSVP
Trigger: TGGAACACTCGGCAGTCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp ATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTGGAAAGCCTGGCGTGTGGCCGGGTCTCTGCAGGCTTaGGGGGCTCTGCAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: MSIFCRSSCSWWKAWRVAGSLQA*GALQAL
Trigger: CAGAGCCTGCAGAGCCCCCAAAGCCTGCAGAGACCC...GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp GCCCGCAAGTCAGCCCTGAAAGGTGCAGGCCCGGTGCTGTCTAGGAGGGCTCTGAACCTCTTTACCTCCTaGTCCATCTCTGCCAGCGTC +
Preference number: 3 (lower is better)
Translates to: ARKSALKGAGPVLSRRALNLFTS*SISASV
Trigger: GACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTT...CAGAGCCCTCCTAGACAGCACCGGGCCTGCACCTTTCAGGGCTGACTTGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp TCCCTTCAGTTGCTCTATCGAGCAGGGCCTCCGGGCTaGGGCTCTGGACCTGGTCTAGGAACTGTATCCGGG +
Preference number: 3 (lower is better)
Translates to: SLQLLYRAGPPG*GSGPGLGTVSG
Trigger: CCCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAGCCCGGAGGCCCTGCTCGATAGAGCAACTGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GGAGCCTTCCTCCTCTGCTTCATCACTCCCTTCAGTTaGTCTATCGAGCAGGGCCTCCGGGCTGAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: GAFLLCFITPFS*SIEQGLRAEAL
Trigger: CAGAGCCTCAGCCCGGAGGCCCTGCTCGATAGAGCAACTGAAGGGAGTGATGAAGCAGAGGAGGAAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TCCTCCTTCCTTCTCCGCTCACAGGCCACCAGAGAGTaGCGGTCATGGCTCTTCTCCAGCTGCATCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SSFLLRSQATRE*RSWLFSSCICR
Trigger: CCTGCAGATGCAGCTGGAGAAGAGCCATGACCGGCACTCTCTGGTGGCCTGTGAGCGGAGAAGGAAGGAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TGCTCTGCCCTTCAGCCTGGACGACGATGGTCTCCCTaGGGGCCACAGCCAACTCCATGTCACGGATCATCT +
Preference number: 3 (lower is better)
Translates to: CSALQPGRRWSP*GPQPTPCHGSS
Trigger: AGATGATCCGTGACATGGAGTTGGCTGTGGCCCGCAGGGAGACCATCGTCGTCCAGGCTGAAGGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGCTGTTGCGGTGCAGGAACACATATTTCCCCTCAATaGCGGCCTGCAGGTGCTTGCCACGGGTCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: CCCGAGTHISPQ*RPAGACHGSAG
Trigger: CCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTTCCTGCACCGCAACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp ATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTGGAAAGCCTGGCGTGTGGCCGACGGAGCGTGCGCATaGCAGCTCCTCCTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: MSIFCRSSCSWWKAWRVADGACA*QLLLLP
Trigger: AGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTC...GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GTGGCTTTTTCAGAACATGTGGTGACTCCCTGGGTCTaGCCGCAAGTCAGCCCTGAAAGGTGCAGGCCCGGT +
Preference number: 3 (lower is better)
Translates to: VAFSEHVVTPWV*PQVSPERCRPG
Trigger: ACCGGGCCTGCACCTTTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAAAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR GCA 72 bp ATTGGCGGTCTGGCAGGTCTTGTTGTAGACGGAGCGTaGGCATTGCAGCTCCTCCTCCTTCCTTCTCCGCTC +
Preference number: 3 (lower is better)
Translates to: IGGLAGLVVDGA*ALQLLLLPSPL
Trigger: GAGCGGAGAAGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTCTACAACAAGACCTGCCAGACCGCCAAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TGGACCAGTTCCTGCTGCAGGCGCAACCAGGTCATCTaGGCCTCAGCCACTCCCGTGTTGTACTCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: WTSSCCRRNQVI*ASATPVLYSSV
Trigger: GACAGAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAGCAGGAACTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp CTGTGGATCTCGGCCTTCATAGCACGGATCTCTGTCTaGCCGGTCTCAGAATCCACCGAGCTGCGCATCTCC +
Preference number: 3 (lower is better)
Translates to: LWISAFIARISV*PVSESTELRIS
Trigger: GGAGATGCGCAGCTCGGTGGATTCTGAGACCGGGCAGACAGAGATCCGTGCTATGAAGGCCGAGATCCACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp CAGGTAATGTGGGCGTGCTCAGAGCGTCGGATCCGGTaGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: QVMWACSERRIR*LLYTWCEQQRG
Trigger: GCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGACGCTCTGAGCACGCCCACATTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp CTATCGAGCAGGGCCTCCGGGCTGAGGCTCTGGACCTaGTCTAGGAACTGTATCCGGGTTTCTTCAAGGGCT +
Preference number: 3 (lower is better)
Translates to: LSSRASGLRLWT*SRNCIRVSSRA
Trigger: AGCCCTTGAAGAAACCCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAGCCCGGAGGCCCTGCTCGATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp ATTTGGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTaGGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGAA +
Preference number: 3 (lower is better)
Translates to: IWANIPECGRSP*GQSRGGAAGAE
Trigger: TTCTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
3UTR GCA 72 bp ACACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTTaGCACGGGTCTGCAGGGTCACGATCTCCAGAAGGT +
Preference number: 3 (lower is better)
Translates to: THISPQWRPAGA*HGSAGSRSPEG
Trigger: ACCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp GTTGCTCTATCGAGCAGGGCCTCCGGGCTGAGGCTCTaGACCTGGTCTAGGAACTGTATCCGGGTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VALSSRASGLRL*TWSRNCIRVSS
Trigger: TGAAGAAACCCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAGCCCGGAGGCCCTGCTCGATAGAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp CAGAGCCTCCTGGAATCTGATCATCAGAGGATGGTCTaGGTCCAGCACGATCAGCTGGGAGCCTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: QSLLESDHQRMV*VQHDQLGAFLL
Trigger: GAGGAGGAAGGCTCCCAGCTGATCGTGCTGGACCCAGACCATCCTCTGATGATCAGATTCCAGGAGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp CCCTTCAGAGCCTCCTGGAATCTGATCATCAGAGGATaGTCTGGGTCCAGCACGATCAGCTGGGAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: PFRASWNLIIRG*SGSSTISWEPS
Trigger: GGAAGGCTCCCAGCTGATCGTGCTGGACCCAGACCATCCTCTGATGATCAGATTCCAGGAGGCTCTGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGCTTAAGCACTGGGCGGTCATTTTCTGCACCAGTGTaGCTTCTGTCTCTGCGCGGTTCAGGAGACGGGCCA +
Preference number: 3 (lower is better)
Translates to: CLSTGRSFSAPV*LLSLRGSGDGP
Trigger: TGGCCCGTCTCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp GACATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTaGAAAGCCTGGCGTGTGGCCTGGAGCTCGCTCAAG +
Preference number: 3 (lower is better)
Translates to: DMSIFCRSSCSW*KAWRVAWSSLK
Trigger: CTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp ATGGACATGTCCATCTTTTGCCGTAGCTCCTGTTCCTaGTGGAAAGCCTGGCGTGTGGCCTGGAGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: MDMSIFCRSSCS*WKAWRVAWSSL
Trigger: GAGCGAGCTCCAGGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TGGGTCCAGCACGATCAGCTGGGAGCCTTCCTCCTCTaGTTCATCACTCCCTTCAGTTGCTCTATCGAGCAG +
Preference number: 3 (lower is better)
Translates to: WVQHDQLGAFLL*FITPFSCSIEQ
Trigger: CTGCTCGATAGAGCAACTGAAGGGAGTGATGAAGCAGAGGAGGAAGGCTCCCAGCTGATCGTGCTGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTCTCTaGGCGGTTCAGGAGACGGGCCAGCTTCTCATTCTT +
Preference number: 3 (lower is better)
Translates to: GGHFLHQCGFCL*AVQETGQLLIL
Trigger: AAGAATGAGAAGCTGGCCCGTCTCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GCCTCTTGCTTGCTTAAGCACTGGGCGGTCATTTTCTaGACCAGTGTGGCTTCTGTCTCTGCGCGGTTCAGG +
Preference number: 3 (lower is better)
Translates to: ASCLLKHWAVIF*TSVASVSARFR
Trigger: CCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp CTGGGGTCTCCAGCTTGGTGGCGATCTTCTGTTGAATaGTCTGCAGCACCTCCTGGTACTGGGGGTAGTCTT +
Preference number: 3 (lower is better)
Translates to: LGSPAWWRSSVE*SAAPPGTGGSL
Trigger: AAGACTACCCCCAGTACCAGGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp AGACACGTGGCTTTTTCAGAACATGTGGTGACTCCCTaGGTCTGCCCGCAAGTCAGCCCTGAAAGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: RHVAFSEHVVTP*VCPQVSPERCR
Trigger: CCTGCACCTTTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAAAAGCCACGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp TGGCTTCGGGTTTGCTTGGTGGCCACATCCAGCTCTTaGACGTCCAGCTTCAGTTTGTCCATCTGCCGGTTG +
Preference number: 3 (lower is better)
Translates to: WLRVCLVATSSS*TSSFSLSICRL
Trigger: CAACCGGCAGATGGACAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCCACCAAGCAAACCCGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp ATGCCTCGTTACGGTGCTTCATGCCCACTAGGCTGGTaGTCCACTGCTGTAGGATTCGCTTCTTCTCCACGG +
Preference number: 3 (lower is better)
Translates to: MPRYGASCPLGW*STAVGFASSPR
Trigger: CCGTGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp ACTGGGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTCTCTGCGCGGTTCAGGAGCATCCATCACTGTCTaGTATGCCTCGTTACGGTGC +
Preference number: 3 (lower is better)
Translates to: TGRSFSAPVWLLSLRGSGASITV*YASLRC
Trigger: GCACCGTAACGAGGCATACAAGACAGTGATGGATGC...TCCTGAACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp CTGCAGGCGCAACCAGGTCATCTGCGCCTCAGCCACTCCCGTGTTGTACTCTTCAGATGTGTCACCAGGTaGGTGTTTTCCTTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: LQAQPGHLRLSHSRVVLFRCVTR*VFSFCS
Trigger: GCTGCAAAAGGAAAACACCAACCTGGTGACACATCT...GAAGAGTACAACACGGGAGTGGCTGAGGCGCAGATGACCTGGTTGCGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp GCTCTAGGAGACACGTGGCTTTTTCAGAACATGTGGTaGCTCCCTGGGTCTGCCCGCAAGTCAGCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: ALGDTWLFQNMW*LPGSARKSALK
Trigger: TTTCAGGGCTGACTTGCGGGCAGACCCAGGGAGTCACCACATGTTCTGAAAAAGCCACGTGTCTCCTAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR TCA 72 bp TGTTGGTGCAGTCATCTGTGGCCTTGTGCATCTCCCTaGCTTTCTTCTGCAGCTCGCGCTGCTGGTAGTGGA +
Preference number: 3 (lower is better)
Translates to: CWCSHLWPCASP*LSSAARAAGSG
Trigger: TCCACTACCAGCAGCGCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGGCCACAGATGACTGCACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TTACGGTGCTTCATGCCCACTAGGCTGGTGGTCCACTaGTGTAGGATTCGCTTCTTCTCCACGGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: LRCFMPTRLVVH*CRIRFFSTAMV
Trigger: CACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp AGCGCATCCATCACTGTCTTGTATGCCTCGTTACGGTaGTTCATGCCCACTAGGCTGGTGGTCCACTGCTGT +
Preference number: 3 (lower is better)
Translates to: SASITVLYASLR*FMPTRLVVHCC
Trigger: ACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACAAGACAGTGATGGATGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GCCACAGCCAACTCCATGTCACGGATCATCTTCTCCTaGTGCTTCAGTAGCTGCCCGTGCCTAACCTTCATC +
Preference number: 3 (lower is better)
Translates to: ATANSMSRIIFS*CFSSCPCLTFI
Trigger: GATGAAGGTTAGGCACGGGCAGCTACTGAAGCAGCAGGAGAAGATGATCCGTGACATGGAGTTGGCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TCTGAGATGGTGTTGGTGCAGTCATCTGTGGCCTTGTaGATCTCCCTGACTTTCTTCTGCAGCTCGCGCTGC +
Preference number: 3 (lower is better)
Translates to: SEMVLVQSSVAL*ISLTFFCSSRC
Trigger: GCAGCGCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGGCCACAGATGACTGCACCAACACCATCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp CCACGGGTCTGCAGGGTCACGATCTCCAGAAGGTTCTaGCGTTTGAGAGCTGTTAGCTGGTTGATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: PRVCRVTISRRF*RLRAVSWLISS
Trigger: AGAGGAGATCAACCAGCTAACAGCTCTCAAACGGCAGAACCTTCTGGAGATCGTGACCCTGCAGACCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp AAATGGGGGCAGGAGAAGGCCGAGCTTTCTGTGGAGTaGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCT +
Preference number: 3 (lower is better)
Translates to: KWGQEKAELSVE*RMRVSSGLQRA
Trigger: AGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCACTCCACAGAAAGCTCGGCCTTCTCCTGCCCCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp CAGGCTCTGGGGGCTCTGTGGGCTCTATGGGTTCTATaGGCTCATATATGCCTTGCTGGAATGTGTCGGTTG +
Preference number: 3 (lower is better)
Translates to: QALGALWALWVL*AHICLAGMCRL
Trigger: CAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGCTGGAGGTCCCCTGTTCCTGCAGCTTGTCCACCATaGACATGTCCATCTTTTGCCGTAGCTCCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: CWRSPVPAACPP*TCPSFAVAPVP
Trigger: AGGAACAGGAGCTACGGCAAAAGATGGACATGTCCATGGTGGACAAGCTGCAGGAACAGGGGACCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGCTTCAGTAGCTGCCCGTGCCTAACCTTCATCCTGTaGATCTCGGCCTTCATAGCACGGATCTCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: CFSSCPCLTFIL*ISAFIARISVC
Trigger: GCAGACAGAGATCCGTGCTATGAAGGCCGAGATCCACAGGATGAAGGTTAGGCACGGGCAGCTACTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp TGGGTTCCACGTCTGTTCCTGGGGAGGTCTCTCCAATaGATTCCACATCTGTGTCTGGAGCGGTCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: WVPRLFLGRSLQ*IPHLCLERSLQ
Trigger: TTGGAGAGACCGCTCCAGACACAGATGTGGAATTCATTGGAGAGACCTCCCCAGGAACAGACGTGGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp TTGAGGACCCGGGTGTCCTCAGCCTGGGACAAGTATTaGGCCTCAAACAGGGCGATGTTTTCTTCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: LRTRVSSAWDKY*ASNRAMFSSSW
Trigger: CCAGCTAGAAGAAAACATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGCTGAGGACACCCGGGTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp CACTGTCGGTGGACTTCACCTGATGCTGACACTCCCTaGGCGCATCCATCACTGTCTTGTATGCCTCGTTAC +
Preference number: 3 (lower is better)
Translates to: HCRWTSPDADTP*AHPSLSCMPRY
Trigger: GTAACGAGGCATACAAGACAGTGATGGATGCGCTCAGGGAGTGTCAGCATCAGGTGAAGTCCACCGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp CCATCACTGTCTTGTATGCCTCGTTACGGTGCTTCATaGCCACTAGGCTGGTGGTCCACTGCTGTAGGATTC +
Preference number: 3 (lower is better)
Translates to: PSLSCMPRYGAS*PLGWWSTAVGF
Trigger: GAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACAAGACAGTGATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTaGTGGAGGTCCCCTGTTCCTGCAGCTTGTCCACCA +
Preference number: 3 (lower is better)
Translates to: ASEGADESTWSS*WRSPVPAACPP
Trigger: TGGTGGACAAGCTGCAGGAACAGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp GTGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTaGAACAGGCATTCCCAGGGCTCAAATAAGTCCACC +
Preference number: 3 (lower is better)
Translates to: VENEGIFWASEG*NRHSQGSNKST
Trigger: GGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp TGTATGCCTCGTTACGGTGCTTCATGCCCACTAGGCTaGTGGTCCACTGCTGTAGGATTCGCTTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: CMPRYGASCPLG*WSTAVGFASSP
Trigger: TGGAGAAGAAGCGAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp AACTCCGTCTGCAGAGCCTCTTGCTTGCTTAAGCACTaGGCGGTCATTTTCTGCACCAGTGTGGCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: NSVCRASCLLKH*AVIFCTSVASV
Trigger: GACAGAAGCCACACTGGTGCAGAAAATGACCGCCCAGTGCTTAAGCAAGCAAGAGGCTCTGCAGACGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TTCTTTTGTTCCATGATGTGCACCTCCTTCTTCAGTTaGTCCACGGACACCAGCTGCTCCTCGCGCTCATGC +
Preference number: 3 (lower is better)
Translates to: FFCSMMCTSFFS*STDTSCSSRSC
Trigger: GCATGAGCGCGAGGAGCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp TGCTGTAGGATTCGCTTCTTCTCCACGGCAATGGTGTCAATCTCTGTGATGGCCAGGCATTTGCTATCCTaGGACTTCTGGGTCCCACGG +
Preference number: 3 (lower is better)
Translates to: CCRIRFFSTAMVSISVMARHLLS*DFWVPR
Trigger: CCGTGGGACCCAGAAGTCCAAGGATAGCAAATGCCT...GGCCATCACAGAGATTGACACCATTGCCGTGGAGAAGAAGCGAATCCTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp AACTCCGTCTCAGTTGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGGGGGGAGTCTCTCCATaGGACCCCACTTCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: NSVSVAILFCSSSSELHRGGVSP*DPTSPS
Trigger: TGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCCC...CCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp CTTCCGAACTGCATCGGTTCTTGTCCAACAGCATGTTaGGCTTGCTCAGGTCGTTGTCCAGGTCCCTCATGT +
Preference number: 3 (lower is better)
Translates to: LPNCIGSCPTAC*ACSGRCPGPSC
Trigger: ACATGAGGGACCTGGACAACGACCTGAGCAAGCTCAACATGCTGTTGGACAAGAACCGATGCAGTTCGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TCTGTCTTGGTGATTACTTTCTTGTCTATCTTGCTCTaGCCTTCAGCCTGGACGACGATGGTCTCCCTGCGG +
Preference number: 3 (lower is better)
Translates to: SVLVITFLSILL*PSAWTTMVSLR
Trigger: CCGCAGGGAGACCATCGTCGTCCAGGCTGAAGGGCAGAGCAAGATAGACAAGAAAGTAATCACCAAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGGAGCGGTCTCTCCAATGAATTCCACTTCTGTTTCTaGGGGAGTCTCTCCATTGGACCCCACTTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: WSGLSNEFHFCF*GSLSIGPHFSF
Trigger: GAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCCCAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp CTGTATGCTCTCTCCAGTGGGTTCCACGTCTGTTCCTaGGGAGGTCTCTCCAATGAATTCCACATCTGTGTC +
Preference number: 3 (lower is better)
Translates to: LYALSSGFHVCS*GGLSNEFHICV
Trigger: GACACAGATGTGGAATTCATTGGAGAGACCTCCCCAGGAACAGACGTGGAACCCACTGGAGAGAGCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCAACAGCAGAGAGGCTTaGAATCACGTGTCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLNSREA*NHVSGL
Trigger: CAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTT...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CAA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATAACAGCAGAGAGGCTTaGAATCACGTGTCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDNSREA*NHVSGL
Trigger: CAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTT...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR-3UTR CAA 90 bp GCAGCTTCCGAAGGAGCTGATGAAAGTACTTGGTCATCTTGCTGGAGGTCCCCTATGTGGCTGAGACGTTaGTGTCATCTTCACCCATCT +
Preference number: 3 (lower is better)
Translates to: AASEGADESTWSSCWRSPMWLRR*CHLHPS
Trigger: AGATGGGTGAAGATGACACAAACGTCTCAGCCACAT...AGGGGACCTCCAGCAAGATGACCAAGTACTTTCATCAGCTCCTTCGGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GCTCTGTGGGCTCTATGGGTTCTATGGGCTCATATATaGCTTGCTGGAATGTGTCGGTTGATGTGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: ALWALWVLWAHI*LAGMCRLMWLR
Trigger: TCTCAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGGATTCAACTTCTGTTTCCTGTATGCTCTCTCCAGTaGGTTCCACGTCTGTTCCTGGGGAGGTCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: WIQLLFPVCSLQ*VPRLFLGRSLQ
Trigger: TTGGAGAGACCTCCCCAGGAACAGACGTGGAACCCACTGGAGAGAGCATACAGGAAACAGAAGTTGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp AAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTaGTGTGACCGTAGGACTGCCAACAGGATGGTTTTA +
Preference number: 3 (lower is better)
Translates to: KIEGLSQDSERH*CDRRTANRMVL
Trigger: TAAAACCATCCTGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR TCA 72 bp TCGGAGGGCCTTCCTAATGGAGTCCACGTCTGTTTCTaGGGTTTCTTCTCCGATGGATTCAACGTTGAGTTC +
Preference number: 3 (lower is better)
Translates to: SEGLPNGVHVCF*GFFSDGFNVEF
Trigger: GAACTCAACGTTGAATCCATCGGAGAAGAAACCTCAGAAACAGACGTGGACTCCATTAGGAAGGCCCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp GGGCGATGTTTTCTTCTAGCTGGTGTGACCTTTCGGTaGGCTGGTCCACAAACAGGTCCTGCTTTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: GRCFLLAGVTFR*AGPQTGPAFSS
Trigger: AGAAGAAAAAGCAGGACCTGTTTGTGGACCAGCTCACCGAAAGGTCACACCAGCTAGAAGAAAACATCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp TCTTCTTATGCATGTCTATTTTGCAGTTGGTGTTGGTaGTGTCCAGGGTGGCCTGGGCGATATCGCCGTCAA +
Preference number: 3 (lower is better)
Translates to: SSYACLFCSWCW*CPGWPGRYRRQ
Trigger: TTGACGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GTGGGCTCTATGGGTTCTATGGGCTCATATATGCCTTaGTGGAATGTGTCGGTTGATGTGGCTGAGACGTTT +
Preference number: 3 (lower is better)
Translates to: VGSMGSMGSYMP*WNVSVDVAETF
Trigger: AAACGTCTCAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAGAACCCATAGAGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp TTGCTCTCTATGCGAAGCTTCTTTTGTTCCATGATGTaGACCTCCTTCTTCAGTTGGTCCACGGACACCAGC +
Preference number: 3 (lower is better)
Translates to: LLSMRSFFCSMM*TSFFSWSTDTS
Trigger: GCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGCTTCGCATAGAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp CAGAGGTCGGTGGATGAGAGACAGGTGTCCCTTTTCTaGAGTAGTTTCTGCTCCATAGGCATTTGCTATCCT +
Preference number: 3 (lower is better)
Translates to: QRSVDERQVSLF*SSFCSIGICYP
Trigger: AGGATAGCAAATGCCTATGGAGCAGAAACTACTTCAGAAAAGGGACACCTGTCTCTCATCCACCGACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp GGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTaGCTTCTTCTCTGCATTACTTGCTCCGCAAAATTG +
Preference number: 3 (lower is better)
Translates to: GIPRAQISPPYS*LLLCITCSAKL
Trigger: CAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CCA 72 bp ATGTTTTCTTCTAGCTGGTGTGACCTTTCGGTGAGCTaGTCCACAAACAGGTCCTGCTTTTTCTTCTCCACC +
Preference number: 3 (lower is better)
Translates to: MFSSSWCDLSVS*STNRSCFFFST
Trigger: GGTGGAGAAGAAAAAGCAGGACCTGTTTGTGGACCAGCTCACCGAAAGGTCACACCAGCTAGAAGAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp ATTTTGCAGTTGGTGTTGGTGATGTCCAGGGTGGCCTaGGCGATATCGCCGTCAATTTTTGAAAGATGTGTC +
Preference number: 3 (lower is better)
Translates to: ILQLVLVMSRVA*AISPSIFERCV
Trigger: GACACATCTTTCAAAAATTGACGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp CCTCAGAGAGTTCCATCAGCTTTTCCTGCATTTGAATaGTCTCTCTTTCTGAGTCCTTCAGCGTGCGCAGAA +
Preference number: 3 (lower is better)
Translates to: PQRVPSAFPAFE*SLFLSPSACAE
Trigger: TTCTGCGCACGCTGAAGGACTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCTGATGGAACTCTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp ATCTCCAGAAGGTTCTGCCGTTTGAGAGCTGTTAGCTaGTTGATCTCCTCTTCAAGAACATCTGTGGTAGCC +
Preference number: 3 (lower is better)
Translates to: ISRRFCRLRAVS*LISSSRTSVVA
Trigger: GGCTACCACAGATGTTCTTGAAGAGGAGATCAACCAGCTAACAGCTCTCAAACGGCAGAACCTTCTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp GTTCCTTCTTCTCATGTGCAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCAGGCCACATCCAGCTCTaGGACGTCCAGCTTCAGTTT +
Preference number: 3 (lower is better)
Translates to: VPSSHVQSCSLCEASFVPGHIQL*DVQLQF
Trigger: AAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCC...TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp CAATCTTGCTCTCTATGCGAAGCTTCTTTTGTTCCATaGTGTGCACCTCCTTCTTCAGTTGGTCCACGGACA +
Preference number: 3 (lower is better)
Translates to: QSCSLCEASFVP*CAPPSSVGPRT
Trigger: TGTCCGTGGACCAACTGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR TCA 72 bp TTTTCCTCAGAGAGTTCCATCAGCTTTTCCTGCATTTaGATGGTCTCTCTTTCTGAGTCCTTCAGCGTGCGC +
Preference number: 3 (lower is better)
Translates to: FSSESSISFSCI*MVSLSESFSVR
Trigger: GCGCACGCTGAAGGACTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCTGATGGAACTCTCTGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR GCA 72 bp GCATTTGAATGGTCTCTCTTTCTGAGTCCTTCAGCGTaGGCAGAAACTCCGTCTCAGTTGCTATATTGTTCT +
Preference number: 3 (lower is better)
Translates to: AFEWSLFLSPSA*AETPSQLLYCS
Trigger: AGAACAATATAGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAGAAAGAGAGACCATTCAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CCA 72 bp TGCTTAGGAACTTTTGAGTTTCTTCCAGTTCTGAGATaGTGTTGGTGCAGTCATCTGTGGCCTTGTGCATCT +
Preference number: 3 (lower is better)
Translates to: CLGTFEFLPVLR*CWCSHLWPCAS
Trigger: AGATGCACAAGGCCACAGATGACTGCACCAACACCATCTCAGAACTGGAAGAAACTCAAAAGTTCCTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR-3UTR CAA 90 bp TTAGGAACTTTTGAGTTTCTTCCAGTTCTGAGATGGTGTTGGTGCAGTCATCTGTGCTTGTTGAAGAAGTaGATGAGGCTCTGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LGTFEFLPVLRWCWCSHLCLLKK*MRLCFL
Trigger: GAGGAAGCAGAGCCTCATCAACTTCTTCAACAAGCA...CAGATGACTGCACCAACACCATCTCAGAACTGGAAGAAACTCAAAAGTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGAGGCTTTGGGGGCTCTaGAGGCTCTGGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQRLWGL*RLWGLC
Trigger: ACAGAGCCCCCAGAGCCTGCAGAGCCCCCAAAGCCT...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGTCCTCTGGGGTCTCTaGAGGCTTTGGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQVLWGL*RLWGLC
Trigger: GCAGAGCCCCCAAAGCCTGCAGAGACCCCAGAGGAC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGTTCACGCCCAGCTCCTaGCTCTGGCTTCGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQFTPSS*LWLRVC
Trigger: GCAAACCCGAAGCCAGAGGCAGGAGCTGGGCGTGAA...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTGGCTCTTCTCCAGCTaGATCTGCAGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEWLFSS*ICRRAR
Trigger: CCTGGCCCGCCTGCAGATGCAGCTGGAGAAGAGCCA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCGACGATGGTCTCCCTaGGGGCCACAGCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLERRWSP*GPQPTP
Trigger: TGGAGTTGGCTGTGGCCCGCAGGGAGACCATCGTCG...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGGGCTCTGCAGGCTCTaGGGGCTCTGTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEGLCRL*GLCGLY
Trigger: ATAGAGCCCACAGAGCCCCCAGAGCCTGCAGAGCCC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGGTCTCTGCAGGCTTTaGGGGCTCTGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEGLCRL*GLCRLW
Trigger: CCAGAGCCTGCAGAGCCCCCAAAGCCTGCAGAGACC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTGCAGTTGGTGTTGGTaGTGTCCAGGGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLECSWCW*CPGWPG
Trigger: CCCAGGCCACCCTGGACATCACCAACACCAACTGCA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTCTGCTTCCTCTCAATaGGGATGGTGCGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESASSQ*GWCAGR
Trigger: TCGCCCGGCGCACCATCCTCATTGAGAGGAAGCAGA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGAGCTCCTGTTCCTGGTaGAAAGCCTGGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESSCSW*KAWRVA
Trigger: GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGCGTAGCTCCTGTTCCTaGTGGAAAGCCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQRSSCS*WKAWRV
Trigger: CACACGCCAGGCTTTCCACCAGGAACAGGAGCTACG...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGCTCTCCACCTCTGTCTaGAGGGCGGCCAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQLSTSV*RAANFF
Trigger: AAAGAAGTTGGCCGCCCTGCAGACAGAGGTGGAGAG...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGCGGATCATCTTCTCCTaGTGCTTCAGTAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQRIIFS*CFSSCP
Trigger: CGGGCAGCTACTGAAGCAGCAGGAGAAGATGATCCG...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTCGGCAGAAGACTGTTaGCCTTCCTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESAEDC*PSCCDP
Trigger: CGGGTCACAGCAGGAAGGCCAACAGTCTTCTGCCGA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGGGCAGCTCTTCCAGTaGATTCAACTTCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQGQLFQ*IQLPLG
Trigger: CCCAAGCGGAAGTTGAATCCACTGGAAGAGCTGCCC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTCCAGCACGATCAGCTaGGAGCCTTCCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESSTIS*EPSSSA
Trigger: AGCAGAGGAGGAAGGCTCCCAGCTGATCGTGCTGGA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGCCTGGGACAAGTATTaGGCCTCAAACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEAWDKY*ASNRAM
Trigger: CATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGTTGTCTATCTTGCTCTaGCCTTCAGCCTGGACGACG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQLSILL*PSAWTT
Trigger: CGTCGTCCAGGCTGAAGGGCAGAGCAAGATAGACAA...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGTTTTCTGCACCAGTGTaGCTTCTGTCTCTGCGCGGT +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQFSAPV*LLSLRG
Trigger: ACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAA...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
3UTR CAA 72 bp GAGGTTCACGCCCAGCTCCTGCCTCTGGCTTCGGGTTaGCTTGGTGGCCACATCCAGCTCTTGGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVHAQLLPLASG*LGGHIQLLDVQ
Trigger: CTGGACGTCCAAGAGCTGGATGTGGCCACCAAGCAAACCCGAAGCCAGAGGCAGGAGCTGGGCGTGAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGTCCACGTCTGTTTCTaGGGTTTCTTCTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQVHVCF*GFFSDG
Trigger: TCCATCGGAGAAGAAACCTCAGAAACAGACGTGGAC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGACTTGTGCATCTCCCTaGCTTTCTTCTGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLETCASP*LSSAAR
Trigger: GCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGATCACTCCCTTCAGTTaGTCTATCGAGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEITPFS*SIEQGL
Trigger: GAGGCCCTGCTCGATAGAGCAACTGAAGGGAGTGAT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTATGCCTCGTTACGGTaGTTCATGCCCACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEYASLR*FMPTRL
Trigger: CAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCTTCAGGACTTCTGGTaGGGTCTCTGCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLELQDFW*GLCPHQ
Trigger: TTGATGAGGGCAGAGACCCCACCAGAAGTCCTGAAG...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCACCGTGCTGTCCTCTaGGGTCTCTGCAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGHRAVL*GLCRLW
Trigger: CCAAAGCCTGCAGAGACCCCAGAGGACAGCACGGTG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGGAAAGCCTGGCGTGTaGCCTGGAGCTCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRGKPGV*PGARSR
Trigger: TCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCGCTCATGCGTGACCTaGACCAGTTCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRRSCVT*TSSCCR
Trigger: CCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCG...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGAGCGGTCTCTCCAATaGATTCCACTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQERSLQ*IPLLFL
Trigger: CAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTGTCCAACAGCATGTTaGGCTTGCTCAGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLECPTAC*ACSGRC
Trigger: ACAACGACCTGAGCAAGCTCAACATGCTGTTGGACA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGTCTTCCTCACCACCTaGTTCATGACTTGGATGTCA +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQVFLTT*FMTWMS
Trigger: TGACATCCAAGTCATGAAGCAGGTGGTGAGGAAGAC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGCTCTGGGGGCTCTGTaGGCTCTATGGGTTCTATGG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRALGAL*ALWVLW
Trigger: CCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGATGCTGACACTCCCTaGGCGCATCCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRDADTP*AHPSLS
Trigger: AGACAGTGATGGATGCGCTCAGGGAGTGTCAGCATC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGATGGCCTCAGTCACTaGTTTCTTGAGGACCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGDGLSH*FLEDPG
Trigger: ACCCGGGTCCTCAAGAAAGCAGTGACTGAGGCCATC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGTTCTTCTCTTCCTCCTaGATGATGGACTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQFFSSS*MMDFLQ
Trigger: CTGCAAGAAGTCCATCATGCAGGAGGAAGAGAAGAA...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCTGAGTCCTTCAGCGTaGGCAGAAACTCCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGLSPSA*AETPSQ
Trigger: CTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCAGAATCCACCGAGCTaGGCATCTCCTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRQNPPS*ASPWPV
Trigger: AACTGGCCAAGGAGATGCGCAGCTCGGTGGATTCTG...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCTTTCTTGTCTATCTTaGTCTGCCCTTCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLELSCLS*SALQPG
Trigger: TCCAGGCTGAAGGGCAGAGCAAGATAGACAAGAAAG...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGCCCTCATCAATTTCTTaGCCATTGTCTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQPSSIS*PLSSSC
Trigger: ACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGG...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGGGGAGTCTCTCCATTaGACCCCACTTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGGESLH*TPLLLQ
Trigger: CTGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCTGAGGCTCTGGACCTaGTCTAGGAACTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGLRLWT*SRNCIR
Trigger: CCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGAGAGAGTGCCGGTCATaGCTCTTCTCCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGRECRS*LFSSCI
Trigger: GATGCAGCTGGAGAAGAGCCATGACCGGCACTCTCT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTGCCCACTAGGCTGGTaGTCCACTGCTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGCPLGW*STAVGF
Trigger: GAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACAAGCTCCTGTTCCTGGTaGAAAGCCTGGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTSSCSW*KAWRVA
Trigger: GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCT...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGACCTCCTTCTTCAGTTaGTCCACGGACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGTSFFS*STDTSC
Trigger: GCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGAGCTGCGCATCTCCTTaGCCAGTTGGATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESCASP*PVGFSS
Trigger: AGAAGAAAATCCAACTGGCCAAGGAGATGCGCAGCT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCCATCTCCAAGGGACTaGTGTCAGAGTAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGPSPRD*CQSRRP
Trigger: AGGTCTCCTACTCTGACATCAGTCCCTTGGAGATGG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTCACCACCTGCTTCATaGCTTGGATGTCATCGCGCA +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGSPPAS*LGCHRA
Trigger: TGCGCGATGACATCCAAGTCATGAAGCAGGTGGTGA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGAGCTTTTCCTGCATTTaGATGGTCTCTCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQSFSCI*MVSLSE
Trigger: CTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCT...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGTCTTCTCCCACAGCATaGTTTGGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRSSPTA*FGALPP
Trigger: TGGAGGCAGAGCACCAAATCATGCTGTGGGAGAAGA...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGTTTTGTTCCATGATGTaGACCTCCTTCTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQFCSMM*TSFFSW
Trigger: CCAACTGAAGAAGGAGGTGCACATCATGGAACAAAA...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGATCATCTTCTCCTGCTaGTTCAGTAGCTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGIIFSC*FSSCPC
Trigger: GCACGGGCAGCTACTGAAGCAGCAGGAGAAGATGAT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGTGTCGTGCCCCCATTaGGAAGTCTCTTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRVSCPH*EVSLIG
Trigger: CCCTATCAAAGAGACTTCCCAATGGGGGCACGACAC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGCCACATCCAGCTCTTaGACGTCCAGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGATSSS*TSSFSL
Trigger: CAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGACTTGGTCATCTTGCTaGAGGTCCCCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGTWSSC*RSPVPA
Trigger: TGCAGGAACAGGGGACCTCCAGCAAGATGACCAAGT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
3UTR CAA 72 bp AACACATATTTCCCCTCAATGGCGGCCTGCAGGTGCTaGCCACGGGTCTGCAGGGTCACGATCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: NTYFPSMAACRC*PRVCRVTISRR
Trigger: CCTTCTGGAGATCGTGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCATTGAGGGGAAATATGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGATCGCCGTCAATTTTTaGAAGATGTGTCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEIAVNF*KMCHQV
Trigger: AACCTGGTGACACATCTTTCAAAAATTGACGGCGAT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATTCTGCTTCCTCTCAATaGGGATGGTGCGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNSASSQ*GWCAGR
Trigger: TCGCCCGGCGCACCATCCTCATTGAGAGGAAGCAGA...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTGGAGAGGACCTTGTTaGGCTGGGACAGCCGGACGC +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLWRGPC*AGTAGR
Trigger: GCGTCCGGCTGTCCCAGCTCAACAAGGTCCTCTCCA...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCGTCCTCTGGGGTCTCTaGAGGCTTTGGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLVLWGL*RLWGLC
Trigger: GCAGAGCCCCCAAAGCCTGCAGAGACCCCAGAGGAC...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTTGGCTCTTCTCCAGCTaGATCTGCAGGCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTWLFSS*ICRRAR
Trigger: CCTGGCCCGCCTGCAGATGCAGCTGGAGAAGAGCCA...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGAGTACTTGGTCATCTTaGTGGAGGTCCCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGSTWSS*WRSPVP
Trigger: AGGAACAGGGGACCTCCAGCAAGATGACCAAGTACT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTCTCATGTGCAATCTTaGTCTCTATGCGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FQSAVGVREGRAEEGRLESHVQS*SLCEAS
Trigger: AGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACACGGATCATCTTCTCCTaGTGCTTCAGTAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTRIIFS*CFSSCP
Trigger: CGGGCAGCTACTGAAGCAGCAGGAGAAGATGATCCG...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCCGGCCTGCAGGTGCTTaGCACGGGTCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKARPAGA*HGSAGS
Trigger: TGACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCG...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCGGGCTCTGCAGGCTCTaGGGGCTCTGTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLGLCRL*GLCGLY
Trigger: ATAGAGCCCACAGAGCCCCCAGAGCCTGCAGAGCCC...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGTCTCTGCAGGCTTTaGGGGCTCTGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSGLCRL*GLCRLW
Trigger: CCAGAGCCTGCAGAGCCCCCAAAGCCTGCAGAGACC...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACACCGTGCTGTCCTCTaGGGTCTCTGCAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESHRAVL*GLCRLW
Trigger: CCAAAGCCTGCAGAGACCCCAGAGGACAGCACGGTG...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACACTGAGGCTCTGGACCTaGTCTAGGAACTGTATCCGG +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTLRLWT*SRNCIR
Trigger: CCGGATACAGTTCCTAGACCAGGTCCAGAGCCTCAG...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGCAGCTTGTCCACCATaGACATGTCCATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGAACPP*TCPSFA
Trigger: GGCAAAAGATGGACATGTCCATGGTGGACAAGCTGC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGCGCTCATGCGTGACCTaGACCAGTTCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVRSCVT*TSSCCR
Trigger: CCTGCAGCAGGAACTGGTCCAGGTCACGCATGAGCG...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTCCAGGTCCCTCATGTaGCGGCTCACTATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGSRSLM*RLTIFC
Trigger: ACAAAAGATAGTGAGCCGCCACATGAGGGACCTGGA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGTCCCACAGCATGATTTaGTGCTCTGCCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRSHSMI*CSASMK
Trigger: CTTCATGGAGGCAGAGCACCAAATCATGCTGTGGGA...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
3UTR CAA 72 bp CTGGCTTCGGGTTTGCTTGGTGGCCACATCCAGCTCTaGGACGTCCAGCTTCAGTTTGTCCATCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LASGLLGGHIQL*DVQLQFVHLPV
Trigger: AACCGGCAGATGGACAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCCACCAAGCAAACCCGAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTGCCTGGGACAAGTATTaGGCCTCAAACAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PGVNSREALNHVSGLPVFAWDKY*ASNRAM
Trigger: CATCGCCCTGTTTGAGGCTCAATACTTGTCCCAGGC...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTGATGCTGACACTCCCTaGGCGCATCCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PGVNSREALNHVSGLPVFDADTP*AHPSLS
Trigger: AGACAGTGATGGATGCGCTCAGGGAGTGTCAGCATC...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTTGCAGTTGGTGTTGGTaGTGTCCAGGGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTCSWCW*CPGWPG
Trigger: CCCAGGCCACCCTGGACATCACCAACACCAACTGCA...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCTATGGGCTCATATATaGCTTGCTGGAATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGLWAHI*LAGMCR
Trigger: CCGACACATTCCAGCAAGGCATATATGAGCCCATAG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTTCACGCCCAGCTCCTaGCTCTGGCTTCGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLFTPSS*LWLRVC
Trigger: GCAAACCCGAAGCCAGAGGCAGGAGCTGGGCGTGAA...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCAGGGATGGCCTCAGTCACTaGTTTCTTGAGGACCCGGGT +
Preference number: 4 (lower is better)
Translates to: WRMRVSSGLQRAGTGIPRDGLSH*FLEDPG
Trigger: ACCCGGGTCCTCAAGAAAGCAGTGACTGAGGCCATC...CCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATCGACGATGGTCTCCCTaGGGGCCACAGCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDRRWSP*GPQPTP
Trigger: TGGAGTTGGCTGTGGCCCGCAGGGAGACCATCGTCG...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGATGGCGGCCTGCAGGTaGTTGCCACGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRMAACR*LPRVCR
Trigger: CCTGCAGACCCGTGGCAAGCACCTGCAGGCCGCCAT...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTTCCACTTCTGTTTCTaGGGGAGTCTCTCCATTGGA +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGFHFCF*GSLSIG
Trigger: TCCAATGGAGAGACTCCCCCAGAAACAGAAGTGGAA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACAGTGTCGTGCCCCCATTaGGAAGTCTCTTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTVSCPH*EVSLIG
Trigger: CCCTATCAAAGAGACTTCCCAATGGGGGCACGACAC...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACAGCCACATCCAGCTCTTaGACGTCCAGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTATSSS*TSSFSL
Trigger: CAAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGC...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACATTTTCTGCACCAGTGTaGCTTCTGTCTCTGCGCGGT +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTFSAPV*LLSLRG
Trigger: ACCGCGCAGAGACAGAAGCCACACTGGTGCAGAAAA...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTAACCTTCATCCTGTaGATCTCGGCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRLTFIL*ISAFIA
Trigger: TGCTATGAAGGCCGAGATCCACAGGATGAAGGTTAG...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
3UTR CAA 72 bp CGGGCGATCTCGCTCTCGCTGTTGGTGATGAGATCGTaGAACCTCTTTACCTCCTTGTCCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAISLSLLVMRS*NLFTSLSISAS
Trigger: GCTGGCAGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAGCGAGAGCGAGATCGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp ATGAGGATGGTGCGCCGGGCGATCTCGCTCTCGCTGTaGGTGATGAGATCGTTGAACCTCTTTACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MRMVRRAISLSL*VMRSLNLFTSL
Trigger: CAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAGCGAGAGCGAGATCGCCCGGCGCACCATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGCTTCTTTTGTTCCATaGTGTGCACCTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGASFVP*CAPPSS
Trigger: TGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGCCTTGTGCATCTCCCTaGCTTTCTTCTGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVPCASP*LSSAAR
Trigger: GCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGG...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGGCTCATATATGCCTTaGTGGAATGTGTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRGSYMP*WNVSVD
Trigger: ATCAACCGACACATTCCAGCAAGGCATATATGAGCC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATTCTGACAGCAGTTGCTaGTTCTCCTGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNSDSSC*FSWREL
Trigger: CAGCTCCCTCCAGGAGAAGCAGCAACTGCTGTCAGA...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTCGTAGCTCCTGTTCCTaGTGGAAAGCCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTRSSCS*WKAWRV
Trigger: CACACGCCAGGCTTTCCACCAGGAACAGGAGCTACG...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGGATGTGTCACCAGGTTaGTGTTTTCCTTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRDVSPG*CFPFAA
Trigger: AGCTGCAAAAGGAAAACACCAACCTGGTGACACATC...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATACCTCCTTCTTCAGTTaGTCCACGGACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNTSFFS*STDTSC
Trigger: GCAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGT...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp GTGTCAATCTCTGTGATGGCCTCAGTCACTGCTTTCTaGAGGACCCGGGTGTCCTCAGCCTGGGACAAGTAT +
Preference number: 4 (lower is better)
Translates to: VSISVMASVTAF*RTRVSSAWDKY
Trigger: ATACTTGTCCCAGGCTGAGGACACCCGGGTCCTCAAGAAAGCAGTGACTGAGGCCATCACAGAGATTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TTGGTCATCTTGCTGGAGGTCCCCTGTTCCTGCAGCTaGTCCACCATGGACATGTCCATCTTTTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: LVILLEVPCSCS*STMDMSIFCRS
Trigger: GCTACGGCAAAAGATGGACATGTCCATGGTGGACAAGCTGCAGGAACAGGGGACCTCCAGCAAGATGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCATCACCACCTGCTTCATaGCTTGGATGTCATCGCGCA +
Preference number: 4 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESSPPAS*LGCHRA
Trigger: TGCGCGATGACATCCAAGTCATGAAGCAGGTGGTGA...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATGGTAGCCTGCATTTCTaGCAGCAGTTGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNGSLHF*QQLLLL
Trigger: GAGAAGCAGCAACTGCTGTCAGAAATGCAGGCTACC...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCGTGGCGATCTTCTGTTaGATGCTCTGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLVAIFC*MLCSTS
Trigger: GGAGGTGCTGCAGAGCATTCAACAGAAGATCGCCAC...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATTATGCCTCGTTACGGTaGTTCATGCCCACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNYASLR*FMPTRL
Trigger: CAGCCTAGTGGGCATGAAGCACCGTAACGAGGCATA...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGACCATCTGTTCCAGCTaGTTGTTGAAGAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRTICSS*LLKKLM
Trigger: CATCAACTTCTTCAACAAGCAGCTGGAACAGATGGT...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTTCCTTCTTCTCATGTaGAATCTTGCTCTCTATGCG +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGFLLLM*NLALYA
Trigger: CGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCTGAGTCCTTCAGCGTaGGCAGAAACTCCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLLSPSA*AETPSQ
Trigger: CTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCAGAATCCACCGAGCTaGGCATCTCCTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLQNPPS*ASPWPV
Trigger: AACTGGCCAAGGAGATGCGCAGCTCGGTGGATTCTG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCAATCATCTTCTCCTGCTaGTTCAGTAGCTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESIIFSC*FSSCPC
Trigger: GCACGGGCAGCTACTGAAGCAGCAGGAGAAGATGAT...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCTCGGCAGAAGACTGTTaGCCTTCCTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKASAEDC*PSCCDP
Trigger: CGGGTCACAGCAGGAAGGCCAACAGTCTTCTGCCGA...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCGGGGAGTCTCTCCATTaGACCCCACTTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLGESLH*TPLLLQ
Trigger: CTGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCC...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGTCATATATGCCTTGCTaGAATGTGTCGGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRSYMPC*NVSVDV
Trigger: CACATCAACCGACACATTCCAGCAAGGCATATATGA...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCGCTCTGGGGGCTCTGTaGGCTCTATGGGTTCTATGG +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKAALGAL*ALWVLW
Trigger: CCATAGAACCCATAGAGCCCACAGAGCCCCCAGAGC...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATTCCAGCACGATCAGCTaGGAGCCTTCCTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDSSTIS*EPSSSA
Trigger: AGCAGAGGAGGAAGGCTCCCAGCTGATCGTGCTGGA...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGGGAAAGCCTGGCGTGTaGCCTGGAGCTCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRGKPGV*PGARSR
Trigger: TCTTGAGCGAGCTCCAGGCCACACGCCAGGCTTTCC...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTGCAGCTTGTCCACCATaGACATGTCCATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: PGVNSREALNHVSGLPVFAACPP*TCPSFA
Trigger: GGCAAAAGATGGACATGTCCATGGTGGACAAGCTGC...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGCTGGGGTCTCCAGCTTaGTGGCGATCTTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVLGSPA*WRSSVE
Trigger: TTCAACAGAAGATCGCCACCAAGCTGGAGACCCCAG...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp GGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTaGAATCACGTGTCTGGCCTGCCGGTGTTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: GCFTPGVNSREA*NHVSGLPVFLR
Trigger: TCTAAGAAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 72 bp AGCGTCTTCTTATGCATGTCTATTTTGCAGTTGGTGTaGGTGATGTCCAGGGTGGCCTGGGCGATATCGCCG +
Preference number: 4 (lower is better)
Translates to: SVFLCMSILQLV*VMSRVAWAISP
Trigger: CGGCGATATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp CTGAGTCCTTCAGCGTGCGCAGAAACTCCGTCTCAGTaGCTATATTGTTCTGCTCCAGCTCTTCCGAACTGC +
Preference number: 4 (lower is better)
Translates to: LSPSACAETPSQ*LYCSAPALPNC
Trigger: GCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTTTCTGCGCACGCTGAAGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGTGTCCAACAGCATGTTaGGCTTGCTCAGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVCPTAC*ACSGRC
Trigger: ACAACGACCTGAGCAAGCTCAACATGCTGTTGGACA...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGGAACTCTGTCTTGGTaGTTACTTTCTTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGGTLSW*LLSCLS
Trigger: AGATAGACAAGAAAGTAATCACCAAGACAGAGTTCC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACAGGCTCATATATGCCTTaGTGGAATGTGTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTGSYMP*WNVSVD
Trigger: ATCAACCGACACATTCCAGCAAGGCATATATGAGCC...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTATCACTCCCTTCAGTTaGTCTATCGAGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTITPFS*SIEQGL
Trigger: GAGGCCCTGCTCGATAGAGCAACTGAAGGGAGTGAT...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCAATCTTGCTCTCTATaGGAAGCTTCTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRQSCSL*EASFVP
Trigger: TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTG...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTTTGTCTATCTTGCTCTaGCCTTCAGCCTGGACGACG +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSLSILL*PSAWTT
Trigger: CGTCGTCCAGGCTGAAGGGCAGAGCAAGATAGACAA...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGAGAATATGAACTTGTaGATCTCCCTGACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGENMNL*ISLTFF
Trigger: GAAGAAAGTCAGGGAGATGCACAAGTTCATATTCTC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR GCA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTATCTCCAGAAGGTTCTaGCGTTTGAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: PGVNSREALNHVSGLPVFISRRF*RLRAVS
Trigger: GCTAACAGCTCTCAAACGGCAGAACCTTCTGGAGAT...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTCTTCAGGACTTCTGGTaGGGTCTCTGCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSLQDFW*GLCPHQ
Trigger: TTGATGAGGGCAGAGACCCCACCAGAAGTCCTGAAG...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGGGCAGCTCTTCCAGTaGATTCAACTTCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDGQLFQ*IQLPLG
Trigger: CCCAAGCGGAAGTTGAATCCACTGGAAGAGCTGCCC...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCTGCCCACTAGGCTGGTaGTCCACTGCTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKACPLGW*STAVGF
Trigger: GAATCCTACAGCAGTGGACCACCAGCCTAGTGGGCA...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTTTCCTGCATTTGAATaGTCTCTCTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGFPAFE*SLFLSP
Trigger: AGGACTCAGAAAGAGAGACCATTCAAATGCAGGAAA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR TCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGTCCACGTCTGTTTCTaGGGTTTCTTCTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTVHVCF*GFFSDG
Trigger: TCCATCGGAGAAGAAACCTCAGAAACAGACGTGGAC...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp CTTCTGGGTCCCACGGCTTCGGTCTTTGGGTTTCTGTCTAATTTAAGGCTTCCTTCTTCTCCCACAGCATaGTTTGGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGPTASVFGFLSNLRLPSSPTA*FGALPP
Trigger: TGGAGGCAGAGCACCAAATCATGCTGTGGGAGAAGA...AGGAAGCCTTAAATTAGACAGAAACCCAAAGACCGAAGCCGTGGGACCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGAGTTTCTTCCAGTTCTaGGATGGTGTTGGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVSFFQF*DGVGAV
Trigger: GACTGCACCAACACCATCTCAGAACTGGAAGAAACT...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGCTCTCCACCTCTGTCTaGAGGGCGGCCAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRLSTSV*RAANFF
Trigger: AAAGAAGTTGGCCGCCCTGCAGACAGAGGTGGAGAG...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCAGTACTTGGTCATCTTaGTGGAGGTCCCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLSTWSS*WRSPVP
Trigger: AGGAACAGGGGACCTCCAGCAAGATGACCAAGTACT...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACATTCCTTCTTCTCATGTaGAATCTTGCTCTCTATGCG +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTFLLLM*NLALYA
Trigger: CGCATAGAGAGCAAGATTGCACATGAGAAGAAGGAA...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCCTTCAGGACTTCTGGTaGGGTCTCTGCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKALQDFW*GLCPHQ
Trigger: TTGATGAGGGCAGAGACCCCACCAGAAGTCCTGAAG...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGAGAGAGTGCCGGTCATaGCTCTTCTCCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRRECRS*LFSSCI
Trigger: GATGCAGCTGGAGAAGAGCCATGACCGGCACTCTCT...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATACTTGGTCATCTTGCTaGAGGTCCCCTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDTWSSC*RSPVPA
Trigger: TGCAGGAACAGGGGACCTCCAGCAAGATGACCAAGT...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTTCCCACAGCATGATTTaGTGCTCTGCCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSSHSMI*CSASMK
Trigger: CTTCATGGAGGCAGAGCACCAAATCATGCTGTGGGA...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp TCCTGGCTTCTTCTCTGCATTACTTGCTCCGCAAAATaGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SWLLLCITCSAK*RVCPRTVRGTD
Trigger: ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 72 bp TCTGCCAGCGTCTTCTTATGCATGTCTATTTTGCAGTaGGTGTTGGTGATGTCCAGGGTGGCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: SASVFLCMSILQ*VLVMSRVAWAI
Trigger: TATCGCCCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TCCATCTCTGCCAGCGTCTTCTTATGCATGTCTATTTaGCAGTTGGTGTTGGTGATGTCCAGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SISASVFLCMSI*QLVLVMSRVAW
Trigger: CCAGGCCACCCTGGACATCACCAACACCAACTGCAAAATAGACATGCATAAGAAGACGCTGGCAGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TTCTTGTCCAACAGCATGTTGAGCTTGCTCAGGTCGTaGTCCAGGTCCCTCATGTGGCGGCTCACTATCTTT +
Preference number: 4 (lower is better)
Translates to: FLSNSMLSLLRS*SRSLMWRLTIF
Trigger: AAAGATAGTGAGCCGCCACATGAGGGACCTGGACAACGACCTGAGCAAGCTCAACATGCTGTTGGACAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TTGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTCTaGTCCAACAGCATGTTGAGCTTGCTCAGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LFCSSSSELHRF*SNSMLSLLRSL
Trigger: CAACGACCTGAGCAAGCTCAACATGCTGTTGGACAAGAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TTCAGCGTGCGCAGAAACTCCGTCTCAGTTGCTATATaGTTCTGCTCCAGCTCTTCCGAACTGCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: FSVRRNSVSVAI*FCSSSSELHRF
Trigger: GAACCGATGCAGTTCGGAAGAGCTGGAGCAGAACAATATAGCAACTGAGACGGAGTTTCTGCGCACGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCTATGGGCTCATATATaGCTTGCTGGAATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLLWAHI*LAGMCR
Trigger: CCGACACATTCCAGCAAGGCATATATGAGCCCATAG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCATTCTTCTCTTCCTCCTaGATGATGGACTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESFFSSS*MMDFLQ
Trigger: CTGCAAGAAGTCCATCATGCAGGAGGAAGAGAAGAA...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACACAATCTTGCTCTCTATaGGAAGCTTCTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTQSCSL*EASFVP
Trigger: TGGAACAAAAGAAGCTTCGCATAGAGAGCAAGATTG...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCTTTCTTGTCTATCTTaGTCTGCCCTTCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLLSCLS*SALQPG
Trigger: TCCAGGCTGAAGGGCAGAGCAAGATAGACAAGAAAG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGTCTCCTGGAGGGAGCTaGTTAGGAACTTTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVSPGGS*LGTFEF
Trigger: AAACTCAAAAGTTCCTAAGCAGCTCCCTCCAGGAGA...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACCCTCATCAATTTCTTaGCCATTGTCTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESPSSIS*PLSSSC
Trigger: ACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGG...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTTCCACTTCTGTTTCTaGGGGAGTCTCTCCATTGGA +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLFHFCF*GSLSIG
Trigger: TCCAATGGAGAGACTCCCCCAGAAACAGAAGTGGAA...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTTCATATATGCCTTGCTaGAATGTGTCGGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: PGVNSREALNHVSGLPVFSYMPC*NVSVDV
Trigger: CACATCAACCGACACATTCCAGCAAGGCATATATGA...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTCTAACCTTCATCCTGTaGATCTCGGCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSLTFIL*ISAFIA
Trigger: TGCTATGAAGGCCGAGATCCACAGGATGAAGGTTAG...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGAGTTGCTGCTTCTCCTaGAGGGAGCTGCTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRSCCFS*RELLRN
Trigger: GTTCCTAAGCAGCTCCCTCCAGGAGAAGCAGCAACT...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp AAGTCCACCTTACTCCTGGCTTCTTCTCTGCATTACTaGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: KSTLLLASSLHY*LRKIEGLSQDS
Trigger: ACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCAGAGAAGAAGCCAGGAGTAAGGTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
3UTR CAA 72 bp TCCGACACCATCTGTTCCAGCTGCTTGTTGAAGAAGTaGATGAGGCTCTGCTTCCTCTCAATGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SDTICSSCLLKK*MRLCFLSMRMV
Trigger: CACCATCCTCATTGAGAGGAAGCAGAGCCTCATCAACTTCTTCAACAAGCAGCTGGAACAGATGGTGTCGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGAGCGGTCTCTCCAATaGATTCCACTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDERSLQ*IPLLFL
Trigger: CAGAAACAGAAGTGGAATTCATTGGAGAGACCGCTC...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATAGCTTTTCCTGCATTTaGATGGTCTCTCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VGSGGCFTPGVNSREALNSFSCI*MVSLSE
Trigger: CTCAGAAAGAGAGACCATTCAAATGCAGGAAAAGCT...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp TGGAGAATGAGGGTATCTTCTGGGCTTCAGAGGGCTGGAACAGGCATTCCCAGGGGAACTCTGTCTTGGTaGTTACTTTCTTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: WRMRVSSGLQRAGTGIPRGTLSW*LLSCLS
Trigger: AGATAGACAAGAAAGTAATCACCAAGACAGAGTTCC...CCTGGGAATGCCTGTTCCAGCCCTCTGAAGCCCAGAAGATACCCTCATTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCGTCTTCCTCACCACCTaGTTCATGACTTGGATGTCA +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKAVFLTT*FMTWMS
Trigger: TGACATCCAAGTCATGAAGCAGGTGGTGAGGAAGAC...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCATCTGTTCCAGCTaGTTGTTGAAGAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVTICSS*LLKKLM
Trigger: CATCAACTTCTTCAACAAGCAGCTGGAACAGATGGT...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGTCCAGGTCCCTCATGTaGCGGCTCACTATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRSRSLM*RLTIFC
Trigger: ACAAAAGATAGTGAGCCGCCACATGAGGGACCTGGA...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp CTATGGGCTCATATATGCCTTGCTGGAATGTGTCGGTaGATGTGGCTGAGACGTTTGTGTCATCTTCACCCA +
Preference number: 4 (lower is better)
Translates to: LWAHICLAGMCR*MWLRRLCHLHP
Trigger: TGGGTGAAGATGACACAAACGTCTCAGCCACATCAACCGACACATTCCAGCAAGGCATATATGAGCCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TTCTCATTCTTCTCTTCCTCCTGCATGATGGACTTCTaGCAGACTTCGATCTCACTGTCGGTGGACTTCACC +
Preference number: 4 (lower is better)
Translates to: FSFFSSSCMMDF*QTSISLSVDFT
Trigger: GGTGAAGTCCACCGACAGTGAGATCGAAGTCTGCAAGAAGTCCATCATGCAGGAGGAAGAGAAGAATGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TGTCCAGGGTGGCCTGGGCGATATCGCCGTCAATTTTaGAAAGATGTGTCACCAGGTTGGTGTTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CPGWPGRYRRQF*KDVSPGWCFPF
Trigger: AAAAGGAAAACACCAACCTGGTGACACATCTTTCAAAAATTGACGGCGATATCGCCCAGGCCACCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR TCA 90 bp CTTCTGGGTCCCACGGCTTCGGTCTTTGGGTTTCTGTCTAATTTAAGGCTTCCTGCTTCTTTTGTTCCATaGTGTGCACCTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLGPTASVFGFLSNLRLPASFVP*CAPPSS
Trigger: TGAAGAAGGAGGTGCACATCATGGAACAAAAGAAGC...AGGAAGCCTTAAATTAGACAGAAACCCAAAGACCGAAGCCGTGGGACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTTTTGTTCCATGATGTaGACCTCCTTCTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLFCSMM*TSFFSW
Trigger: CCAACTGAAGAAGGAGGTGCACATCATGGAACAAAA...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR GCA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTTCTCATGTGCAATCTTaGTCTCTATGCGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGCFTPGVNSREALNHVSSHVQS*SLCEAS
Trigger: AGAAGCTTCGCATAGAGAGCAAGATTGCACATGAGA...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp CTTCTGCAGCTCGCGCTGCTGGTAGTGGAACTCTGTCTTGGTGATTACTTTCTTCCCTCATCAATTTCTTaGCCATTGTCTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQLALLVVELCLGDYFLPSSIS*PLSSSC
Trigger: ACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGG...AAGAAAGTAATCACCAAGACAGAGTTCCACTACCAGCAGCGCGAGCTGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR CCA 90 bp CTTCTGGGTCCCACGGCTTCGGTCTTTGGGTTTCTGTCTAATTTAAGGCTTCCTGATGTGTCACCAGGTTaGTGTTTTCCTTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLGPTASVFGFLSNLRLPDVSPG*CFPFAA
Trigger: AGCTGCAAAAGGAAAACACCAACCTGGTGACACATC...AGGAAGCCTTAAATTAGACAGAAACCCAAAGACCGAAGCCGTGGGACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGAGCTGCGCATCTCCTTaGCCAGTTGGATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRSCASP*PVGFSS
Trigger: AGAAGAAAATCCAACTGGCCAAGGAGATGCGCAGCT...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp CTTCTGGGTCCCACGGCTTCGGTCTTTGGGTTTCTGTCTAATTTAAGGCTTCCTATCGCCGTCAATTTTTaGAAGATGTGTCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLGPTASVFGFLSNLRLPIAVNF*KMCHQV
Trigger: AACCTGGTGACACATCTTTCAAAAATTGACGGCGAT...AGGAAGCCTTAAATTAGACAGAAACCCAAAGACCGAAGCCGTGGGACCCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR TCA 90 bp TTTGGGTTTCTGTCTAATTTAAGGCTTCCTGGGAAATGGGGGCAGGAGAAGGCCCTGCTTAGGAACTTTTaGGTTTCTTCCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FGFLSNLRLPGKWGQEKALLRNF*VSSSSE
Trigger: CTCAGAACTGGAAGAAACTCAAAAGTTCCTAAGCAG...GGCCTTCTCCTGCCCCCATTTCCCAGGAAGCCTTAAATTAGACAGAAACCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CCA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTTTTCCTGCATTTGAATaGTCTCTCTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTFPAFE*SLFLSP
Trigger: AGGACTCAGAAAGAGAGACCATTCAAATGCAGGAAA...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
3UTR CAA 72 bp CTGTTGGTGATGAGATCGTTGAACCTCTTTACCTCCTaGTCCATCTCTGCCAGCGTCTTCTTATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LLVMRSLNLFTS*SISASVFLCMS
Trigger: AGACATGCATAAGAAGACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTTCAACGATCTCATCACCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
3UTR CAA 72 bp TCTGTTTCTGAGGTTTCTTCTCCGATGGATTCAACGTaGAGTTCTGTCATGGTCTTTTTAATGGGTTCCACG +
Preference number: 4 (lower is better)
Translates to: SVSEVSSPMDST*SSVMVFLMGST
Trigger: CGTGGAACCCATTAAAAAGACCATGACAGAACTCAACGTTGAATCCATCGGAGAAGAAACCTCAGAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR CAA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGACGGAGCGTGCGCATaGCAGCTCCTCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQDGACA*QLLLLP
Trigger: AGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGGGGGAGTCTCTCCATaGGACCCCACTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEGGVSP*DPTSPS
Trigger: TGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCCC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGGGGTCTCTGCAGGCTTaGGGGGCTCTGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGGSLQA*GALQAL
Trigger: CAGAGCCTGCAGAGCCCCCAAAGCCTGCAGAGACCC...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGGCCACATCCAGCTCTaGGACGTCCAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQGHIQL*DVQLQF
Trigger: AAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGATTTTGCAGTTGGTGTaGGTGATGTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQILQLV*VMSRVA
Trigger: GGCCACCCTGGACATCACCAACACCAACTGCAAAAT...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGCAGGCCCTCATCAATTTCTaGGCCATTGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QSAVGVREGRAEEGRLEQALINF*AIVFQL
Trigger: CAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGC...CTGCTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACAGGGTCTCTGCAGGCTTaGGGGGCTCTGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTGSLQA*GALQAL
Trigger: CAGAGCCTGCAGAGCCCCCAAAGCCTGCAGAGACCC...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGCATCCATCACTGTCTaGTATGCCTCGTTACGGTGC +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEASITV*YASLRC
Trigger: GCACCGTAACGAGGCATACAAGACAGTGATGGATGC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGGCGGCCTGCAGGTGCTaGCCACGGGTCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVAACRC*PRVCRV
Trigger: GACCCTGCAGACCCGTGGCAAGCACCTGCAGGCCGC...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGTTGGTGTTTTCCTTTaGCAGCTTCCGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEVGVFL*QLPKEL
Trigger: CAGCTCCTTCGGAAGCTGCAAAAGGAAAACACCAAC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCACCTCCTTCTTCAGTaGGTCCACGGACACCAGCTG +
Preference number: 5 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRHLLLQ*VHGHQL
Trigger: CAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTG...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGAGATGTGTCACCAGGTaGGTGTTTTCCTTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLERCVTR*VFSFCS
Trigger: GCTGCAAAAGGAAAACACCAACCTGGTGACACATCT...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGTGCTTGTTGAAGAAGTaGATGAGGCTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLECLLKK*MRLCFL
Trigger: GAGGAAGCAGAGCCTCATCAACTTCTTCAACAAGCA...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp TTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGCTGGAGGCGGCTCACTATCTTTaGTTCCTTCTTCTCATGTGC +
Preference number: 5 (lower is better)
Translates to: FQSAVGVREGRAEEGRLEAAHYL*FLLLMC
Trigger: GCACATGAGAAGAAGGAACAAAAGATAGTGAGCCGC...CTCCAGCCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGAAGTACTTGGTCATCTaGCTGGAGGTCCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRKYLVI*LEVPCS
Trigger: GGAACAGGGGACCTCCAGCAAGATGACCAAGTACTT...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGAACCTCTTTACCTCCTaGTCCATCTCTGCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRNLFTS*SISASV
Trigger: GACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTT...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGAACAGCATGTTGAGCTaGCTCAGGTCGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRNSMLS*LRSLSR
Trigger: CCTGGACAACGACCTGAGCAAGCTCAACATGCTGTT...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGACGGAGCGTGCGCATaGCAGCTCCTCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GGCFTPGVNSREALNHVSDGACA*QLLLLP
Trigger: AGGAAGGAGGAGGAGCTGCAATGCGCACGCTCCGTC...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTTGTCCAACAGCATGTaGAGCTTGCTCAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGLSNSM*SLLRSL
Trigger: CAACGACCTGAGCAAGCTCAACATGCTGTTGGACAA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCATCTCCTTGGCCAGTaGGATTTTCTTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGHLLGQ*DFLLPQ
Trigger: CTGTGGGAGAAGAAAATCCAACTGGCCAAGGAGATG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTCTGGAGAGGACCTTGTaGAGCTGGGACAGCCGGACG +
Preference number: 5 (lower is better)
Translates to: GGCFTPGVNSREALNHVSLERTL*SWDSRT
Trigger: CGTCCGGCTGTCCCAGCTCAACAAGGTCCTCTCCAG...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGATGTGGCTGAGACGTTaGTGTCATCTTCACCCATCT +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGMWLRR*CHLHPS
Trigger: AGATGGGTGAAGATGACACAAACGTCTCAGCCACAT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp ATGTCCATCTTTTGCCGTAGCTCCTGTTCCTGGTGGAAAGCCTGGCGTGTGGCCGCCCTCATCAATTTCTaGGCCATTGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: MSIFCRSSCSWWKAWRVAALINF*AIVFQL
Trigger: CAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGC...GGCCACACGCCAGGCTTTCCACCAGGAACAGGAGCTACGGCAAAAGATGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS-3UTR CAA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGGGGGAGTCTCTCCATaGGACCCCACTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTGGVSP*DPTSPS
Trigger: TGAAGGAGAAGTGGGGTCCAATGGAGAGACTCCCCC...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCCGATGGATTCAACGTaGAGTTCTGTCATGGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGPMDST*SSVMVF
Trigger: AAAGACCATGACAGAACTCAACGTTGAATCCATCGG...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCAGGCCACATCCAGCTCTaGGACGTCCAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESGHIQL*DVQLQF
Trigger: AAACTGAAGCTGGACGTCCAAGAGCTGGATGTGGCC...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTATTTTGCAGTTGGTGTaGGTGATGTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PGVNSREALNHVSGLPVFILQLV*VMSRVA
Trigger: GGCCACCCTGGACATCACCAACACCAACTGCAAAAT...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp CCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGGCCTGCCGGTGTTTAACCTCTTTACCTCCTaGTCCATCTCTGCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: PGVNSREALNHVSGLPVFNLFTS*SISASV
Trigger: GACGCTGGCAGAGATGGACAAGGAGGTAAAGAGGTT...AAACACCGGCAGGCCAGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGATCTGTTCCAGCTGCTaGTTGAAGAAGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGICSSC*LKKLMR
Trigger: CCTCATCAACTTCTTCAACAAGCAGCTGGAACAGAT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCACCTCCTTCTTCAGTaGGTCCACGGACACCAGCTG +
Preference number: 5 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLHLLLQ*VHGHQL
Trigger: CAGCTGGTGTCCGTGGACCAACTGAAGAAGGAGGTG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp CTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGCGGTATGCGAAGCTTCTTTaGTTCCATGATGTGCACCTC +
Preference number: 5 (lower is better)
Translates to: LIFQSAVGVREGRAEEGRYAKLL*FHDVHL
Trigger: GAGGTGCACATCATGGAACAAAAGAAGCTTCGCATA...CCGCCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATAAGTACTTGGTCATCTaGCTGGAGGTCCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VGSGGCFTPGVNSREALNKYLVI*LEVPCS
Trigger: GGAACAGGGGACCTCCAGCAAGATGACCAAGTACTT...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGTATCGCCGTCAATTTTaGAAAGATGTGTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGYRRQF*KDVSPG
Trigger: ACCTGGTGACACATCTTTCAAAAATTGACGGCGATA...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS-3UTR CAA 90 bp GGGCTAATATTCCAGAGTGCGGTAGGAGTCCGTGAGGGCAGAGCAGAGGAGGGGAGAGAGAATATGAACTaGTGCATCTCCCTGACTTTC +
Preference number: 5 (lower is better)
Translates to: GLIFQSAVGVREGRAEEGRENMN*CISLTF
Trigger: GAAAGTCAGGGAGATGCACAAGTTCATATTCTCTCT...CCCCTCCTCTGCTCTGCCCTCACGGACTCCTACCGCACTCTGGAATATTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS TCA 90 bp GTCTCTGCCCTCATCAATTTCTTGGCCATTGTCTTCCAGCTGTGGTaGTACCTCAGGGCCTTCAGTATACTGCTGCTCCGAGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VSALINFLAIVFQLW*YLRAFSILLLRVLF
Trigger: GAAGAGGACTCGGAGCAGCAGTATACTGAAGGCCCTGAGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053440.8
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp AGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGACCGTAGGACTGCCAACATATGCGAAGCTTCTTTaGTTCCATGATGTGCACCTC +
Preference number: 5 (lower is better)
Translates to: RVCPRTVRGTDVTVGLPTYAKLL*FHDVHL
Trigger: GAGGTGCACATCATGGAACAAAAGAAGCTTCGCATA...TGTTGGCAGTCCTACGGTCACATCAGTGCCTCTCACTGTCCTGGGACAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCAACAGCATGTTGAGCTaGCTCAGGTCGTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLNSMLS*LRSLSR
Trigger: CCTGGACAACGACCTGAGCAAGCTCAACATGCTGTT...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTAGTTCTGAGATGGTGTaGGTGCAGTCATCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GGCFTPGVNSREALNHVSSSEMV*VQSSVA
Trigger: GGCCACAGATGACTGCACCAACACCATCTCAGAACT...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCGCCCTCATCAATTTCTaGGCCATTGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLALINF*AIVFQL
Trigger: CAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGC...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235971.2
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGATGTGGCTGAGACGTTaGTGTCATCTTCACCCATCT +
Preference number: 5 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVMWLRR*CHLHPS
Trigger: AGATGGGTGAAGATGACACAAACGTCTCAGCCACAT...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp CTTCTGGGTCCCACGGCTTCGGTCTTTGGGTTTCTGTCTAATTTAAGGCTTCCTGCATCCATCACTGTCTaGTATGCCTCGTTACGGTGC +
Preference number: 5 (lower is better)
Translates to: LLGPTASVFGFLSNLRLPASITV*YASLRC
Trigger: GCACCGTAACGAGGCATACAAGACAGTGATGGATGC...AGGAAGCCTTAAATTAGACAGAAACCCAAAGACCGAAGCCGTGGGACCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCACGTGTCTGTTGGTGTTTTCCTTTaGCAGCTTCCGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GGCFTPGVNSREALNHVSVGVFL*QLPKEL
Trigger: CAGCTCCTTCGGAAGCTGCAAAAGGAAAACACCAAC...AGACACGTGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp ACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATGTGAGATGTGTCACCAGGTaGGTGTTTTCCTTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: TCSAKLRVCPRTVRGTDVRCVTR*VFSFCS
Trigger: GCTGCAAAAGGAAAACACCAACCTGGTGACACATCT...CACATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GTCGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATGCGGCTCACTATCTTTaGTTCCTTCTTCTCATGTGC +
Preference number: 5 (lower is better)
Translates to: VGSGGCFTPGVNSREALNAAHYL*FLLLMC
Trigger: GCACATGAGAAGAAGGAACAAAAGATAGTGAGCCGC...ATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTTTGTCCAACAGCATGTaGAGCTTGCTCAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTLSNSM*SLLRSL
Trigger: CAACGACCTGAGCAAGCTCAACATGCTGTTGGACAA...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTCATCTCCTTGGCCAGTaGGATTTTCTTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTHLLGQ*DFLLPQ
Trigger: CTGTGGGAGAAGAAAATCCAACTGGCCAAGGAGATG...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TTTCTCATCTACACAAGGAAAAAGGTAACTGGTGCCCAGAAACCCCAGGGTAGGGGTGGCGATCTTCTGTaGAATGCTCTGCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: FLIYTRKKVTGAQKPQGRGGDLL*NALQHL
Trigger: GAGGTGCTGCAGAGCATTCAACAGAAGATCGCCACC...CCTACCCTGGGGTTTCTGGGCACCAGTTACCTTTTTCCTTGTGTAGATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCTGCTTGTTGAAGAAGTaGATGAGGCTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLCLLKK*MRLCFL
Trigger: GAGGAAGCAGAGCCTCATCAACTTCTTCAACAAGCA...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp CGGATCCGGTGGCTGCTTTACACCTGGTGTGAACAGCAGAGAGGCTTTGAATCAAGAGCTGTTAGCTGGTaGATCTCCTCTTCAAGAACA +
Preference number: 5 (lower is better)
Translates to: RIRWLLYTWCEQQRGFESRAVSW*ISSSRT
Trigger: TGTTCTTGAAGAGGAGATCAACCAGCTAACAGCTCT...TGATTCAAAGCCTCTCTGCTGTTCACACCAGGTGTAAAGCAGCCACCGGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp GGAACAGGCATTCCCAGGGCTCAAATAAGTCCACCTTACTCCTGGCTTCTTCTCCCGATGGATTCAACGTaGAGTTCTGTCATGGTCTTT +
Preference number: 5 (lower is better)
Translates to: GTGIPRAQISPPYSWLLLPMDST*SSVMVF
Trigger: AAAGACCATGACAGAACTCAACGTTGAATCCATCGG...GAGAAGAAGCCAGGAGTAAGGTGGACTTATTTGAGCCCTGGGAATGCCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp TGCATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTTATCGCCGTCAATTTTaGAAAGATGTGTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: CITCSAKLRVCPRTVRGTYRRQF*KDVSPG
Trigger: ACCTGGTGACACATCTTTCAAAAATTGACGGCGATA...AGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS-3UTR CAA 90 bp ATTACTTGCTCCGCAAAATTGAGGGTCTGTCCCAGGACAGTGAGAGGCACTGATATCTGTTCCAGCTGCTaGTTGAAGAAGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: ITCSAKLRVCPRTVRGTDICSSC*LKKLMR
Trigger: CCTCATCAACTTCTTCAACAAGCAGCTGGAACAGAT...ATCAGTGCCTCTCACTGTCCTGGGACAGACCCTCAATTTTGCGGAGCAAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236813.2
CDS CAA 72 bp CTGGTGGGGTCTCTGCCCTCATCAATTTCTTGGCCATaGTCTTCCAGCTGTGGTGATACCCGTCAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LVGSLPSSISWP*SSSCGDTRQPG
Trigger: ACCAGGCTGACGGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGCAGAGACCCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS CCA 72 bp GGACTTCTGGTGGGGTCTCTGCCCTCATCAATTTCTTaGCCATTGTCTTCCAGCTGTGGTGATACCTCAGGG +
Preference number: 6 (lower is better)
Translates to: GLLVGSLPSSIS*PLSSSCGDTSG
Trigger: CCCTGAGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGCAGAGACCCCACCAGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053440.8
ENSMUST00000236813.2
CDS CCA 72 bp GGACTTCTGGTGGGGTCTCTGCCCTCATCAATTTCTTaGCCATTGTCTTCCAGCTGTGGTGATACCCGTCAG +
Preference number: 6 (lower is better)
Translates to: GLLVGSLPSSIS*PLSSSCGDTRQ
Trigger: CTGACGGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGCAGAGACCCCACCAGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235971.2
CDS CAA 72 bp CTGGTGGGGTCTCTGCCCTCATCAATTTCTTGGCCATaGTCTTCCAGCTGTGGTGATACCTCAGGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: LVGSLPSSISWP*SSSCGDTSGPS
Trigger: TGAAGGCCCTGAGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAGGGCAGAGACCCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053440.8
ENSMUST00000236813.2
CDS TCA 72 bp CCACTTCTCCTTCAGAGATGGCTTCCCCATCCGTGCTaGCTTTCTCAGCATCCATCATTTCCCCTTCAGATC +
Preference number: 6 (lower is better)
Translates to: PLLLQRWLPHPC*LSQHPSFPLQI
Trigger: GATCTGAAGGGGAAATGATGGATGCTGAGAAAGTCAGCACGGATGGGGAAGCCATCTCTGAAGGAGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053440.8
ENSMUST00000236813.2
CDS GCA 72 bp CAACCGCAAACACGAAGCAGAGAGAATATGAACTTGTaGATCTCCCTGACTTTCTTCTGCAGCTCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: QPQTRSRENMNL*ISLTFFCSSRC
Trigger: GCAGCGCGAGCTGCAGAAGAAAGTCAGGGAGATGCACAAGTTCATATTCTCTCTGCTTCGTGTTTGCGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053440.8
CDS TCA 72 bp CTCATCAATTTCTTGGCCATTGTCTTCCAGCTGTGGTaGTACCTCAGGGCCTTCAGTATACTGCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LINFLAIVFQLW*YLRAFSILLLR
Trigger: TCGGAGCAGCAGTATACTGAAGGCCCTGAGGTATCACCACAGCTGGAAGACAATGGCCAAGAAATTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053440.8
ENSMUST00000236813.2