Pregenerated sensors for CCDC38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036168Ensembl transcript IDs: ENSMUST00000092215.6, ENSMUST00000132214.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTATCAGTGTCCTGGGTTACAGGGATTTAAATTTGAATTTTAGTTaGGTCTGGCTGCTAAGGATTTCTGTTGTACTCACTGTCTGGTAT | + |
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Preference number: 1 (lower is better) Translates to: CISVLGYRDLNLNFS*VWLLRISVVLTVWY Trigger: ATACCAGACAGTGAGTACAACAGAAATCCTTAGCAGCCAGACTCAACTAAAATTCAAATTTAAATCCCTGTAACCCAGGACACTGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCAGGATTGATCTTGTGTaGGTTCTGAGTGCAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: WCGGVSVTGSSPSRHAALRIDLV*VLSAAH Trigger: GTGAGCTGCACTCAGAACCCACACAAGATCAATCCT...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGAGTGCAGCTCACAATaGACTGTTTTCTGTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: SCWCGGVSVTGSSPSRHAECSSQ*TVFCYR Trigger: CCTGTAACAGAAAACAGTCCATTGTGAGCTGCACTC...AGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCAACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACCTGATGATGGGGCACTaGGGATTGATCTTGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSRAAILIPFFLSKACKYLMMGH*GLILCG Trigger: CCCACACAAGATCAATCCTCAGTGCCCCATCATCAG...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGTACTCTACAACTAGATCTCAGAAGCTTGTGAAATCACTAACATGTTGGCTACATCAGAGGCGTTaGAGAAGAAGAGGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: RKYSTTRSQKLVKSLTCWLHQRR*RRRGRW Trigger: CCATCTTCCTCTTCTTCTTCAACGCCTCTGATGTAG...CCAACATGTTAGTGATTTCACAAGCTTCTGAGATCTAGTTGTAGAGTACTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACAAAATTCTCATGCTTTaGGGAAGGCCATTCTATTGT | + |
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Preference number: 2 (lower is better) Translates to: PSRAAILIPFFLSKACKYKILML*GRPFYC Trigger: ACAATAGAATGGCCTTCCTCAAAGCATGAGAATTTT...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR-3UTR GCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTTGCTAGGGCAGTATTaGATCACTGAAAGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLLGQY*ITESQH Trigger: ATGTTGGCTTTCAGTGATGCAATACTGCCCTAGCAA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| 3UTR CCA 72 bp | TCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTaGAATTTGCTAGGGCAGTATTGCATCACTGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SCKLPAKGLLRP*NLLGQYCITES Trigger: GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| 3UTR GCA 72 bp | GGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTaGATCACTGAAAGCCAACATCCACATAAAACATTC | + |
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Preference number: 3 (lower is better) Translates to: GLLRPWNLLGQY*ITESQHPHKTF Trigger: GAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| 3UTR CCA 72 bp | CAGTCTGATGATGGGGCACTGAGGATTGATCTTGTGTaGGTTCTGAGTGCAGCTCACAATGGACTGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: QSDDGALRIDLV*VLSAAHNGLFS Trigger: AGAAAACAGTCCATTGTGAGCTGCACTCAGAACCCACACAAGATCAATCCTCAGTGCCCCATCATCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| 3UTR TCA 72 bp | AAGATAATCTTAGAGCTACTGTTTATGGATCCAGTGTaGGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KIILELLFMDPV*VVGVEESQSLG Trigger: ACCCAGTGACTGAGACTCCTCCACACCAACAACTCACACTGGATCCATAAACAGTAGCTCTAAGATTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCACCAAGGTGAGGTTCTaGTCTTCCAGCTCCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: WCGGVSVTGSSPSRHAALTKVRF*SSSSVK Trigger: CTTCACGGAGCTGGAAGAGCAGAACCTCACCTTGGT...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGAAGCTCCGTGAAGACCTaGAGCAACTCCTCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGSSVKT*SNSSGS Trigger: GGAGCCAGAGGAGTTGCTGCAGGTCTTCACGGAGCT...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCCAGCTCCAGCTCTGCTaGCTTCTCCTCCTCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESQLQLC*LLLLSF Trigger: GAACGAGAGGAGGAGAAGGCAGCAGAGCTGGAGCTG...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTCTCCTGCCTCAGGATTaGCTGCTTCTGAGCATCGGA | + |
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Preference number: 4 (lower is better) Translates to: PAKGLLRPWNLLGQYCITLLPQD*LLLSIG Trigger: TCCGATGCTCAGAAGCAGGCAATCCTGAGGCAGGAG...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGAACCAAGGTGAGGTTCTaGTCTTCCAGCTCCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGTKVRF*SSSSVK Trigger: CTTCACGGAGCTGGAAGAGCAGAACCTCACCTTGGT...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCACTTTGACCAGTTTTTaGACTGCATTCAAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WCGGVSVTGSSPSRHAALTLTSF*TAFKLP Trigger: TGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGT...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | AGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTCTGAGCATATGTTTGTaGTCCAGCAGGAAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCWCGGVSVTGSSPSRHALSICL*SSRKEM Trigger: CATCTCCTTCCTGCTGGAGCACAAACATATGCTCAG...AGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCAACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGACTTGGGTTGTGCCACTaGTCTTTCCAGAGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGLGLCH*SFQSSF Trigger: AAAGCTGCTCTGGAAAGAGCAGTGGCACAACCCAAG...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTCTTCTTCTTGGGTTGTaGCACTGCTCTTTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PAKGLLRPWNLLGQYCITLLLGL*HCSFQS Trigger: GCTCTGGAAAGAGCAGTGGCACAACCCAAGAAGAAG...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGAGACTTCCTAGAGTCTTaGCCCAAAGTATGTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGDFLES*PKVCFP Trigger: CGGGAAACATACTTTGGGCCAAGACTCTAGGAAGTC...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCCTTGAAATAAATCTCTaGCAGCAGATCAAACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: WCGGVSVTGSSPSRHAALLEINL*QQIKLH Trigger: GTGGAGTTTGATCTGCTGCCAGAGATTTATTTCAAG...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCAATACTGAACCAAGGTaGGGTTCTGCTCTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESNTEPR*GSALPA Trigger: AGCTGGAAGAGCAGAACCTCACCTTGGTTCAGTATT...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGGCGAGACTCTACTTTaGCCAGTTTTTGAACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PAKGLLRPWNLLGQYCITGETLL*PVFELH Trigger: ATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCC...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCTTCTTCAAAGGACAATaGGTCATCTTGGAGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: WCGGVSVTGSSPSRHAALFFKGQ*VILELF Trigger: AAAAAGCTCCAAGATGACGCATTGTCCTTTGAAGAA...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTCCTCAGCATCTCCGATaGAGACTCTATACACTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PAKGLLRPWNLLGQYCITPQHLR*RLYTLD Trigger: ATCAAGTGTATAGAGTCTGCATCGGAGATGCTGAGG...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCGACTTCCTAGAGTCTTaGCCCAAAGTATGTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESDFLES*PKVCFP Trigger: CGGGAAACATACTTTGGGCCAAGACTCTAGGAAGTC...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGATTCCCAACTTCTTCTTaGGTTGTGCCACTGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGFPTSS*VVPLLF Trigger: AAAGAGCAGTGGCACAACCCAAGAAGAAGTTGGGAA...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCAGGATTGCCTGCTTCTaGGCATCGGAATTGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESRIACF*ASELNS Trigger: AGAATTCAATTCCGATGCTCAGAAGCAGGCAATCCT...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGTCGCCACGGGCTGGCTaGTACTCCTCAAGAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKSPRAG*YSSRGT Trigger: AGTTCCTCTTGAGGAGTATCAGCCAGCCCGTGGCGA...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGCAGCTCCAGCTCTGCTaGCTTCTCCTCCTCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKQLQLC*LLLLSF Trigger: GAACGAGAGGAGGAGAAGGCAGCAGAGCTGGAGCTG...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCCCTCAGCATCTCCGATaGAGACTCTATACACTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESPQHLR*RLYTLD Trigger: ATCAAGTGTATAGAGTCTGCATCGGAGATGCTGAGG...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| 3UTR CAA 72 bp | AAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGAATTaGCTAGGGCAGTATTGCATCACTGAAAGCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: KLPAKGLLRPWN*LGQYCITESQH Trigger: ATGTTGGCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCTGCTTTCTTGAGCTCTaGTGTCATTTGGAGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESCFLEL*CHLELV Trigger: AACAAGCTCCAAATGACATCAGAGCTCAAGAAAGCA...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | AGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTATTTCATGTATTCCTTaGGGAGGAACTCTGTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCWCGGVSVTGSSPSRHAISCIP*GGTLFL Trigger: CAAAAACAGAGTTCCTCCTCAAGGAATACATGAAAT...AGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCAACAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR TCA 90 bp | AGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTTTGATCTTGTATCACTaGCTAAAAGGAGCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SCWCGGVSVTGSSPSRHALILYH*LKGALV Trigger: AACAAGAGCTCCTTTTAGTCAGTGATACAAGATCAA...AGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCAACAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR GCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACAGCTCCGTGAAGACCTaGAGCAACTCCTCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSRAAILIPFFLSKACKYSSVKT*SNSSGS Trigger: GGAGCCAGAGGAGTTGCTGCAGGTCTTCACGGAGCT...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR TCA 90 bp | GCAAGCTGTGAGTTCAGTGTCCAGTCTGATGATGGGGCACTGAGGATTGATCTTTGCTTTCTTGAGCTCTaGTGTCATTTGGAGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ASCEFSVQSDDGALRIDLCFLEL*CHLELV Trigger: AACAAGCTCCAAATGACATCAGAGCTCAAGAAAGCA...AAGATCAATCCTCAGTGCCCCATCATCAGACTGGACACTGAACTCACAGCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR TCA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGATTGATCTTGTATCACTaGCTAAAAGGAGCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGLILYH*LKGALV Trigger: AACAAGAGCTCCTTTTAGTCAGTGATACAAGATCAA...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGCGTCCTCTTTCTGTCTaGACCTTCTGTCAGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKRPLSV*TFCQPE Trigger: CTCAGGCTGACAGAAGGTGCAGACAGAAAGAGGACG...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCTCACTCTTTATTGATTaGACTTCCATGCTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESSLFID*TSMLAF Trigger: GAAAGCAAGCATGGAAGTTCAATCAATAAAGAGTGA...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCATTTCATGTATTCCTTaGGGAGGAACTCTGTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESISCIP*GGTLFL Trigger: CAAAAACAGAGTTCCTCCTCAAGGAATACATGAAAT...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR GCA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCTATTGTTTCTTGTGCTaGCATTTTGAGAGCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: KGLLRPWNLLGQYCITESYCFLC*HFESIY Trigger: GTAGATGCTCTCAAAATGGCAGCACAAGAAACAATA...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | GCAAGCTGTGAGTTCAGTGTCCAGTCTGATGATGGGGCACTGAGGATTGATCTTATTTTTGGAAGAATGTaGTTGCTTTTGGACGACTGG | + |
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Preference number: 4 (lower is better) Translates to: ASCEFSVQSDDGALRIDLIFGRM*LLLDDW Trigger: CCAGTCGTCCAAAAGCAACCACATTCTTCCAAAAAT...AAGATCAATCCTCAGTGCCCCATCATCAGACTGGACACTGAACTCACAGCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
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| CDS-3UTR CCA 90 bp | AGGAAGTACTCTACAACTAGATCTCAGAAGCTTGTGAAATCACTAACATGTTGGCCGTGTCTTCCTCCTTaGCTTCCTCGCCTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RKYSTTRSQKLVKSLTCWPCLPP*LPRLEL Trigger: GAGTTCAAGGCGAGGAAGCCAAGGAGGAAGACACGG...CCAACATGTTAGTGATTTCACAAGCTTCTGAGATCTAGTTGTAGAGTACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGAATACTGAACCAAGGTaGGGTTCTGCTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKNTEPR*GSALPA Trigger: AGCTGGAAGAGCAGAACCTCACCTTGGTTCAGTATT...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACGAACTGCATTCAAGCTaGCAACCTCAGCATCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAILIPFFLSKACKYELHSS*QPQHLR Trigger: TCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTC...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGGACCAGTTTTTGAACTaGATTCAAGCTGCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKDQFLN*IQAANL Trigger: GAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTC...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGCTTGGGTTGTGCCACTaGTCTTTCCAGAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRLGLCH*SFQSSF Trigger: AAAGCTGCTCTGGAAAGAGCAGTGGCACAACCCAAG...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTACTCTACAACTAGATCTCAGAAGCTTGTGAAATCACTAACATGTTGGTTTAGCCGCTCCTCCTaGTGTCTCTGCTTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKYSTTRSQKLVKSLTCWFSRSS*CLCFSF Trigger: GAAGGAAAAGCAGAGACACCAGGAGGAGCGGCTAAA...CCAACATGTTAGTGATTTCACAAGCTTCTGAGATCTAGTTGTAGAGTACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR TCA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGACTCCTCTGGCTCCTTaGAATAAATCTCTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRTPLAP*NKSLAA Trigger: TGCTGCCAGAGATTTATTTCAAGGAGCCAGAGGAGT...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGACTTTGACCAGTTTTTaGACTGCATTCAAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKTLTSF*TAFKLP Trigger: TGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGT...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACGGCGAGACTCTACTTTaGCCAGTTTTTGAACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAILIPFFLSKACKYGETLL*PVFELH Trigger: ATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCC...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTATTCCATGTAGGCTCCTaGCTCAGGATTGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVFHVGS*LRIACF Trigger: GAAGCAGGCAATCCTGAGGCAGGAGCCTACATGGAA...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGATCTCCAGAACTTATTaGTGTGTGCATCTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRISRTY*CVHLGC Trigger: GCATCCCAGATGCACACATCAATAAGTTCTGGAGAT...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAGAACTGCATTCAAGCTaGCAACCTCAGCATCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVELHSS*QPQHLR Trigger: TCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTC...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTACTTCTTCTTGGGTTGTaGCACTGCTCTTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVLLLGL*HCSFQS Trigger: GCTCTGGAAAGAGCAGTGGCACAACCCAAGAAGAAG...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGGCATCTACAGATCTCTaGTCATTTTCTCGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKASTDL*SFSRRN Trigger: ATTCCTACGAGAAAATGACCAGAGATCTGTAGATGC...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGCTTGAAATAAATCTCTaGCAGCAGATCAAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKLEINL*QQIKLH Trigger: GTGGAGTTTGATCTGCTGCCAGAGATTTATTTCAAG...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTTTAGCCGCTCCTCCTaGTGTCTCTGCTTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSFSRSS*CLCFSF Trigger: GAAGGAAAAGCAGAGACACCAGGAGGAGCGGCTAAA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGTCACTCTTTATTGATTaGACTTCCATGCTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKSLFID*TSMLAF Trigger: GAAAGCAAGCATGGAAGTTCAATCAATAAAGAGTGA...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTACTCCTCTGGCTCCTTaGAATAAATCTCTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSTPLAP*NKSLAA Trigger: TGCTGCCAGAGATTTATTTCAAGGAGCCAGAGGAGT...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGGTTTATTGTTTCTTGTaGTGCCATTTTGAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGQYCITESQHPHKTFAKVYCFL*CHFESI Trigger: GATGCTCTCAAAATGGCAGCACAAGAAACAATAAAC...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTACTCTACAACTAGATCTCAGAAGCTTGTGAAATCACTAACATGTTGGTGCGATTGCTGTATTTaGCATTGTTTTGGGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKYSTTRSQKLVKSLTCWCDCCI*HCFGDN Trigger: GTTGTCCCCAAAACAATGGCAAATACAGCAATCGCA...CCAACATGTTAGTGATTTCACAAGCTTCTGAGATCTAGTTGTAGAGTACTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTCTGAGCATATGTTTGTaGTCCAGCAGGAAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLSICL*SSRKEM Trigger: CATCTCCTTCCTGCTGGAGCACAAACATATGCTCAG...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTACTTGTGCTGCCATTTTaGGAGCATCTACAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVLVLPF*EHLQIS Trigger: AGAGATCTGTAGATGCTCTCAAAATGGCAGCACAAG...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTCTTGTGCTGCCATTTTaGGAGCATCTACAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLVLPF*EHLQIS Trigger: AGAGATCTGTAGATGCTCTCAAAATGGCAGCACAAG...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACTATTGTTTCTTGTGCTaGCATTTTGAGAGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAILIPFFLSKACKYYCFLC*HFESIY Trigger: GTAGATGCTCTCAAAATGGCAGCACAAGAAACAATA...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTGACCAGTTTTTGAACTaGATTCAAGCTGCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSDQFLN*IQAANL Trigger: GAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTC...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTATTCCCAACTTCTTCTTaGGTTGTGCCACTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVFPTSS*VVPLLF Trigger: AAAGAGCAGTGGCACAACCCAAGAAGAAGTTGGGAA...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGGTTTATTGTTTCTTGTaGTGCCATTTTGAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRVYCFL*CHFESI Trigger: GATGCTCTCAAAATGGCAGCACAAGAAACAATAAAC...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR GCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTGCGATTGCTGTATTTaGCATTGTTTTGGGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSCDCCI*HCFGDN Trigger: GTTGTCCCCAAAACAATGGCAAATACAGCAATCGCA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTGCATCTACAGATCTCTaGTCATTTTCTCGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSASTDL*SFSRRN Trigger: ATTCCTACGAGAAAATGACCAGAGATCTGTAGATGC...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CCA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAATTTTTGGAAGAATGTaGTTGCTTTTGGACGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTLDTCLQQGQPKVIFGRM*LLLDDW Trigger: CCAGTCGTCCAAAAGCAACCACATTCTTCCAAAAAT...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTTCTTCAAAGGACAATaGGTCATCTTGGAGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: INKLTLDTCLQQGQPKVSFFKGQ*VILELF Trigger: AAAAAGCTCCAAGATGACGCATTGTCCTTTGAAGAA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS-3UTR CAA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCCAACTTCTTCTTGGGTaGTGCCACTGCTCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WCGGVSVTGSSPSRHAALQLLLG*CHCSFQ Trigger: CTGGAAAGAGCAGTGGCACAACCCAAGAAGAAGTTG...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCAGAATGTGGTTGCTTTaGGACGACTGGGCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WCGGVSVTGSSPSRHAALRMWLL*DDWALF Trigger: AAAAAGGGCCCAGTCGTCCAAAAGCAACCACATTCT...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCCATCTCCAGAACTTATaGATGTGTGCATCTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WCGGVSVTGSSPSRHAALHLQNL*MCASGM Trigger: CATCCCAGATGCACACATCAATAAGTTCTGGAGATG...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTGCACTCTCCATGCTTGCTTTCTaGAGCTCTGATGTCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCGGVSVTGSSPSRHAALSMLAF*SSDVIW Trigger: CCAAATGACATCAGAGCTCAAGAAAGCAAGCATGGA...GAGTGCAGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS TCA 90 bp | AGGTCGCTCAGCTCCACCAGGCGAGACTCTACTTTGACCAGTTTTTaGACTGCATTCAAGCTGCCAACCTCAGCATCTCCGATGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSSTRRDSTLTSF*TAFKLPTSASPMQT Trigger: AGTCTGCATCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCCTGGTGGAGCTGAGCGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTATCCTGAGCATATGTTaGTGCTCCAGCAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITILSIC*CSSRKE Trigger: CTCCTTCCTGCTGGAGCACAAACATATGCTCAGGAT...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 90 bp | TCCTGGTGTCTCTGCTTTTCCTTCATCTTCTCTTCACGCAGCTTTTaGCGTCGCTCCTTCTGTTTGAGCCTTTCGATCGCTTCCACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWCLCFSFIFSSRSF*RRSFCLSLSIASTC Trigger: ACACGTGGAAGCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGAAGATGAAGGAAAAGCAGAGACACCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGAAGAATGTGGTTGCTTTaGGACGACTGGGCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGRMWLL*DDWALF Trigger: AAAAAGGGCCCAGTCGTCCAAAAGCAACCACATTCT...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCCAACTTCTTCTTGGGTaGTGCCACTGCTCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGLLRPWNLLGQYCITESQLLLG*CHCSFQ Trigger: CTGGAAAGAGCAGTGGCACAACCCAAGAAGAAGTTG...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS TCA 90 bp | GCTCCAGCTCTGCTGCCTTCTCCTCCTCTCGTTCACAGTTCATCCTaGGCATATGTTTGTGCTCCAGCAGGAAGGAGATGTTGTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: APALLPSPPLVHSSS*AYVCAPAGRRCCCL Trigger: TAAACAACAACATCTCCTTCCTGCTGGAGCACAAACATATGCTCAGGATGAACTGTGAACGAGAGGAGGAGAAGGCAGCAGAGCTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 90 bp | GCTCAGCTCCACCAGGCGAGACTCTACTTTGACCAGTTTTTGAACTaGATTCAAGCTGCCAACCTCAGCATCTCCGATGCAGACTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AQLHQARLYFDQFLN*IQAANLSISDADSI Trigger: TATAGAGTCTGCATCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCCTGGTGGAGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGTTGGTGTGGAGGAGTCTCAGTCACTGGGTCCTCACCGAGTAGGCATGCTTTCGGGACGAAAATGTaGTCTTCTGGTAGATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCWCGGVSVTGSSPSRHAFGTKM*SSGRFS Trigger: TGAAAATCTACCAGAAGACAACATTTTCGTCCCGAA...AGCATGCCTACTCGGTGAGGACCCAGTGACTGAGACTCCTCCACACCAACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTTTGCTGTATTTGCCATaGTTTTGGGGACAACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITLLYLP*FWGQLQ Trigger: CTGAAGTTGTCCCCAAAACAATGGCAAATACAGCAA...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTTTGCGATTGCTGTATTaGCCATTGTTTTGGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITLRLLY*PLFWGQ Trigger: TTGTCCCCAAAACAATGGCAAATACAGCAATCGCAA...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTTCTGAAACTGACATCTaGTCTGAGTCGATGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITSETDI*SESMLL Trigger: TAACAGCATCGACTCAGACAAGATGTCAGTTTCAGA...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CCA 90 bp | TTCCTAGAGTCTTGGCCCAAAGTATGTTTCCCGTGTCTTCCTCCTTaGCTTCCTCGCCTTGAACTCCATTCTTCTGAAACTGACATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLESWPKVCFPCLPP*LPRLELHSSETDIL Trigger: CAAGATGTCAGTTTCAGAAGAATGGAGTTCAAGGCGAGGAAGCCAAGGAGGAAGACACGGGAAACATACTTTGGGCCAAGACTCTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGAAAGCTCTGAAACTGACATCTaGTCTGAGTCGATGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KGLLRPWNLLGQYCITESSETDI*SESMLL Trigger: TAACAGCATCGACTCAGACAAGATGTCAGTTTCAGA...GCTTTCAGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTAGCAGGAAGGAGATGTaGTTGTTTATCTTATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITSRKEM*LFILSC Trigger: ACAGGATAAGATAAACAACAACATCTCCTTCCTGCT...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 90 bp | CTCAGCAAAGTAAATCGCTTTCCATGTAGGCTCCTGCCTCAGGATTaGCTGCTTCTGAGCATCGGAATTGAATTCTCCAAAACTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKVNRFPCRLLPQD*LLLSIGIEFSKTEE Trigger: CTCTTCAGTTTTGGAGAATTCAATTCCGATGCTCAGAAGCAGGCAATCCTGAGGCAGGAGCCTACATGGAAAGCGATTTACTTTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTTTTGGAGCTTGTTTATaGTTTCTTGTGCTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITFGACL*FLVLPF Trigger: AAATGGCAGCACAAGAAACAATAAACAAGCTCCAAA...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGTTCCTAGTCCTGTAAACTTCCAGCTAAAGGTCTGCTGCGGCCCTGGATTTGGAGCTTGTTTATaGTTTCTTGTGCTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVPSPVNFQLKVCCGPGFGACL*FLVLPF Trigger: AAATGGCAGCACAAGAAACAATAAACAAGCTCCAAA...TCCAGGGCCGCAGCAGACCTTTAGCTGGAAGTTTACAGGACTAGGAACAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTAAAGGTCTGCTGCGGCCCTGGAATTTGCTAGGGCAGTATTGCATCACTGATGTCATTTGGAGCTaGTTTATTGTTTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAKGLLRPWNLLGQYCITDVIWS*FIVSCA Trigger: AGCACAAGAAACAATAAACAAGCTCCAAATGACATC...AGTGATGCAATACTGCCCTAGCAAATTCCAGGGCCGCAGCAGACCTTTAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAGCTCCTGCCTCAGGATaGCCTGCTTCTGAGCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: YINKLTLDTCLQQGQPKVAPASG*PASEHR Trigger: CCGATGCTCAGAAGCAGGCAATCCTGAGGCAGGAGC...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
||
| CDS CCA 90 bp | GTATACTCAAGTAGAAATCTGTCTCTTTGGTCGTTAATAAACTCGTaGACCGTCCTCTTTCTGTCTGCACCTTCTGTCAGCCTGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: VYSSRNLSLWSLINS*TVLFLSAPSVSLRI Trigger: TATTCTCAGGCTGACAGAAGGTGCAGACAGAAAGAGGACGGTCCACGAGTTTATTAACGACCAAAGAGACAGATTTCTACTTGAGTATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGTCTTGTGCTGCCATTTaGAGAGCATCTACAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGQYCITESQHPHKTFAKSCAAI*RASTDL Trigger: GAGATCTGTAGATGCTCTCAAAATGGCAGCACAAGA...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGGGACAATGCGTCATCTaGGAGCTTTTTCTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRGQCVI*ELFLSF Trigger: AAAGCTGAGAAAAAGCTCCAAGATGACGCATTGTCC...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCAGTATTGCATCACTGAAAGCCAACATCCACATAAAACATTCGCTAAGAGCAGGAAGGAGATGTaGTTGTTTATCTTATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGQYCITESQHPHKTFAKSRKEM*LFILSC Trigger: ACAGGATAAGATAAACAACAACATCTCCTTCCTGCT...CTTAGCGAATGTTTTATGTGGATGTTGGCTTTCAGTGATGCAATACTGCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAATCCTGAGCATATGTTaGTGCTCCAGCAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YINKLTLDTCLQQGQPKVILSIC*CSSRKE Trigger: CTCCTTCCTGCTGGAGCACAAACATATGCTCAGGAT...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CCA 90 bp | TTTATTGTTTCTTGTGCTGCCATTTTGAGAGCATCTACAGATCTCTaGTCATTTTCTCGTAGGAATTCTTCAAAGGACAATGCGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FIVSCAAILRASTDL*SFSRRNSSKDNASS Trigger: AGATGACGCATTGTCCTTTGAAGAATTCCTACGAGAAAATGACCAGAGATCTGTAGATGCTCTCAAAATGGCAGCACAAGAAACAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTGGACAATGCGTCATCTaGGAGCTTTTTCTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSGQCVI*ELFLSF Trigger: AAAGCTGAGAAAAAGCTCCAAGATGACGCATTGTCC...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATGATGGTAAAAATGTGTGGTGTGTCTTTACTACACCTATACAGGACTAACAGGCTTGTTTATTGTTTCTaGTGCTGCCATTTTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MMVKMCGVSLLHLYRTNRLVYCF*CCHFES Trigger: GCTCTCAAAATGGCAGCACAAGAAACAATAAACAAG...CCTGTTAGTCCTGTATAGGTGTAGTAAAGACACACCACACATTTTTACCATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTCCATGCTTGCTTTCTaGAGCTCTGATGTCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSSMLAF*SSDVIW Trigger: CCAAATGACATCAGAGCTCAAGAAAGCAAGCATGGA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCGTGCAGCTATACTAATACCTTTCTTTTTGTCTAAAGCTTGCAAATACGGAGGAACTCTGTTTTaGCTATATCACTCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRAAILIPFFLSKACKYGGTLF*LYHSLL Trigger: CAATAAAGAGTGATATAGCAAAAACAGAGTTCCTCC...GTATTTGCAAGCTTTAGACAAAAAGAAAGGTATTAGTATAGCTGCACGGGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTTGCTGTATTTGCCATaGTTTTGGGGACAACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLLYLP*FWGQLQ Trigger: CTGAAGTTGTCCCCAAAACAATGGCAAATACAGCAA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTTTGCGATTGCTGTATTaGCCATTGTTTTGGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLRLLY*PLFWGQ Trigger: TTGTCCCCAAAACAATGGCAAATACAGCAATCGCAA...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTCTTGTTTATTGTTTCTaGTGCTGCCATTTTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSLVYCF*CCHFES Trigger: GCTCTCAAAATGGCAGCACAAGAAACAATAAACAAG...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAACTTCGATGTTTTACTaGATTCTGCAGTCTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YINKLTLDTCLQQGQPKVTSMFY*ILQSLE Trigger: CTCAAGAGACTGCAGAATCAAGTAAAACATCGAAGT...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | TACATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAGATGTCATTTGGAGCTaGTTTATTGTTTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YINKLTLDTCLQQGQPKVDVIWS*FIVSCA Trigger: AGCACAAGAAACAATAAACAAGCTCCAAATGACATC...TACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATAAATTGACTTTGGATACATGTCTCCAACAGGGACAACCTAAAGTAAGTGGAGGAACTCTGTTTTaGCTATATCACTCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: INKLTLDTCLQQGQPKVSGGTLF*LYHSLL Trigger: CAATAAAGAGTGATATAGCAAAAACAGAGTTCCTCC...ACTTACTTTAGGTTGTCCCTGTTGGAGACATGTATCCAAAGTCAATTTATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | GAGGTCGCTCAGCTCCACCAGGCGAGACTCTACTTTGACCAGTTTTaGAACTGCATTCAAGCTGCCAACCTCAGCATCTCCGATGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVAQLHQARLYFDQF*NCIQAANLSISDAD Trigger: GTCTGCATCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCCTGGTGGAGCTGAGCGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS TCA 72 bp | TCTCTTCACGCAGCTTTTGCCGTCGCTCCTTCTGTTTaGGCCTTTCGATCGCTTCCACGTGTTCTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLHAAFAVAPSV*AFRSLPRVLWE Trigger: TTCCCAGAGAACACGTGGAAGCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | CTCCTGGTGTCTCTGCTTTTCCTTCATCTTCTCTTCACGCAGCTTTaGCCGTCGCTCCTTCTGTTTGAGCCTTTCGATCGCTTCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLVSLLFLHLLFTQL*PSLLLFEPFDRFHV Trigger: CACGTGGAAGCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGAAGATGAAGGAAAAGCAGAGACACCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS TCA 72 bp | CTGCTGCCTTCTCCTCCTCTCGTTCACAGTTCATCCTaGGCATATGTTTGTGCTCCAGCAGGAAGGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: LLPSPPLVHSSS*AYVCAPAGRRC Trigger: ACATCTCCTTCCTGCTGGAGCACAAACATATGCTCAGGATGAACTGTGAACGAGAGGAGGAGAAGGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CCA 72 bp | TCAGGACGAGTGAACCCAGATGACTTCCTAGAGTCTTaGCCCAAAGTATGTTTCCCGTGTCTTCCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRVNPDDFLES*PKVCFPCLPPW Trigger: CCAAGGAGGAAGACACGGGAAACATACTTTGGGCCAAGACTCTAGGAAGTCATCTGGGTTCACTCGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | GGCCCAAAGTATGTTTCCCGTGTCTTCCTCCTTGGCTTCCTCGCCTaGAACTCCATTCTTCTGAAACTGACATCTTGTCTGAGTCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GPKYVSRVFLLGFLA*NSILLKLTSCLSRC Trigger: GCATCGACTCAGACAAGATGTCAGTTTCAGAAGAATGGAGTTCAAGGCGAGGAAGCCAAGGAGGAAGACACGGGAAACATACTTTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 72 bp | CACCAGGCGAGACTCTACTTTGACCAGTTTTTGAACTaGATTCAAGCTGCCAACCTCAGCATCTCCGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: HQARLYFDQFLN*IQAANLSISDA Trigger: TGCATCGGAGATGCTGAGGTTGGCAGCTTGAATGCAGTTCAAAAACTGGTCAAAGTAGAGTCTCGCCTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 72 bp | CTCTGCTTTTCCTTCATCTTCTCTTCACGCAGCTTTTaGCGTCGCTCCTTCTGTTTGAGCCTTTCGATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCFSFIFSSRSF*RRSFCLSLSIA Trigger: AGCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGAAGATGAAGGAAAAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 72 bp | TCTCTGCTTTTCCTTCATCTTCTCTTCACGCAGCTTTaGCCGTCGCTCCTTCTGTTTGAGCCTTTCGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLFLHLLFTQL*PSLLLFEPFDR Trigger: GCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGAAGATGAAGGAAAAGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | TCCTTCATCTTCTCTTCACGCAGCTTTTGCCGTCGCTCCTTCTGTTaGAGCCTTTCGATCGCTTCCACGTGTTCTCTGGGAATAGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFIFSSRSFCRRSFC*SLSIASTCSLGIDS Trigger: TGAATCTATTCCCAGAGAACACGTGGAAGCGATCGAAAGGCTCAAACAGAAGGAGCGACGGCAAAAGCTGCGTGAAGAGAAGATGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | GCTGCCTTCTCCTCCTCTCGTTCACAGTTCATCCTGAGCATATGTTaGTGCTCCAGCAGGAAGGAGATGTTGTTGTTTATCTTATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAFSSSRSQFILSIC*CSSRKEMLLFILSC Trigger: ACAGGATAAGATAAACAACAACATCTCCTTCCTGCTGGAGCACAAACATATGCTCAGGATGAACTGTGAACGAGAGGAGGAGAAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 72 bp | GTAAATCGCTTTCCATGTAGGCTCCTGCCTCAGGATTaGCTGCTTCTGAGCATCGGAATTGAATTCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNRFPCRLLPQD*LLLSIGIEFSK Trigger: TTTGGAGAATTCAATTCCGATGCTCAGAAGCAGGCAATCCTGAGGCAGGAGCCTACATGGAAAGCGATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132214.8 |
||
| CDS CCA 72 bp | AGTAGAAATCTGTCTCTTTGGTCGTTAATAAACTCGTaGACCGTCCTCTTTCTGTCTGCACCTTCTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRNLSLWSLINS*TVLFLSAPSVS Trigger: GCTGACAGAAGGTGCAGACAGAAAGAGGACGGTCCACGAGTTTATTAACGACCAAAGAGACAGATTTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092215.6 |
||
| CDS CAA 90 bp | CCTTGGCTTCCTCGCCTTGAACTCCATTCTTCTGAAACTGACATCTaGTCTGAGTCGATGCTGTTATCTCCTTTAGCTGTATTTATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PWLPRLELHSSETDI*SESMLLSPLAVFME Trigger: CTCCATAAATACAGCTAAAGGAGATAACAGCATCGACTCAGACAAGATGTCAGTTTCAGAAGAATGGAGTTCAAGGCGAGGAAGCCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 72 bp | CCTCGCCTTGAACTCCATTCTTCTGAAACTGACATCTaGTCTGAGTCGATGCTGTTATCTCCTTTAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PRLELHSSETDI*SESMLLSPLAV Trigger: TACAGCTAAAGGAGATAACAGCATCGACTCAGACAAGATGTCAGTTTCAGAAGAATGGAGTTCAAGGCGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS GCA 72 bp | TCCTCTCGTTCACAGTTCATCCTGAGCATATGTTTGTaGTCCAGCAGGAAGGAGATGTTGTTGTTTATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSQFILSICL*SSRKEMLLFIL Trigger: TAAGATAAACAACAACATCTCCTTCCTGCTGGAGCACAAACATATGCTCAGGATGAACTGTGAACGAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 72 bp | TCTTTTGTTGACATCTTCGAGATTCTCATCCACATCTaGGGAATACTGAACCAAGGTGAGGTTCTGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFVDIFEILIHI*GILNQGEVLLF Trigger: GAAGAGCAGAACCTCACCTTGGTTCAGTATTCCCAAGATGTGGATGAGAATCTCGAAGATGTCAACAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CAA 90 bp | AAATTTTTCTCTTTTGTTGACATCTTCGAGATTCTCATCCACATCTaGGGAATACTGAACCAAGGTGAGGTTCTGCTCTTCCAGCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KFFSFVDIFEILIHI*GILNQGEVLLFQLR Trigger: ACGGAGCTGGAAGAGCAGAACCTCACCTTGGTTCAGTATTCCCAAGATGTGGATGAGAATCTCGAAGATGTCAACAAAAGAGAAAAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS CCA 72 bp | GTTGACACTGTATACTCAAGTAGAAATCTGTCTCTTTaGTCGTTAATAAACTCGTGGACCGTCCTCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VDTVYSSRNLSL*SLINSWTVLFL Trigger: CAGAAAGAGGACGGTCCACGAGTTTATTAACGACCAAAGAGACAGATTTCTACTTGAGTATACAGTGTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
||
| CDS TCA 72 bp | AGTACTCTTCGTCCTGTGATTTTGATCTTGTATCACTaGCTAAAAGGAGCTCTTGTTTGTCTGCAGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: STLRPVILILYH*LKGALVCLQIE Trigger: CTCAATCTGCAGACAAACAAGAGCTCCTTTTAGTCAGTGATACAAGATCAAAATCACAGGACGAAGAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS CCA 72 bp | TCTTGTGCTGCCATTTTGAGAGCATCTACAGATCTCTaGTCATTTTCTCGTAGGAATTCTTCAAAGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: SCAAILRASTDL*SFSRRNSSKDN Trigger: ATTGTCCTTTGAAGAATTCCTACGAGAAAATGACCAGAGATCTGTAGATGCTCTCAAAATGGCAGCACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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| CDS CAA 90 bp | TCTTTAATGGCTATGAGTCTTTCAAACCTTTTGATTGTCTTTTTCTaGGTTGACACTGTATACTCAAGTAGAAATCTGTCTCTTTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SLMAMSLSNLLIVFF*VDTVYSSRNLSLWS Trigger: CGACCAAAGAGACAGATTTCTACTTGAGTATACAGTGTCAACCAAGAAAAAGACAATCAAAAGGTTTGAAAGACTCATAGCCATTAAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092215.6 ENSMUST00000132214.8 |
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