RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC33 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037716

Ensembl transcript IDs: ENSMUST00000042205.13, ENSMUST00000098681.4, ENSMUST00000098682.10, ENSMUST00000119665.2, ENSMUST00000215944.2

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATTCTTCTGTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATaGCTGCTGCAGGGCATGCTGGACTGTATACCACTCAGATCTTCC +
Preference number: 1 (lower is better)
Translates to: DSSVHSLLEQQASFK*LLQGMLDCIPLRSS
Trigger: GGAAGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCACAGAAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
3UTR-3UTR GCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCCTTCCTTTAAATGCCTaGTGCAGGGCATGCTGGACT +
Preference number: 2 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSLPLNA*CRACWT
Trigger: AGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAG...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
3UTR CAA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTaGTTCAGCGCAGATTCTTCTGTGCACTCATTGCTAGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: AILFSRCRNGGLNYV*FSADSSVHSLLEQQ
Trigger: TTGCTGTTCTAGCAATGAGTGCACAGAAGAATCTGCGCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
3UTR GCA 72 bp GTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATaGCTGCTGCAGGGCATGCTGGACTGTATACCACTC +
Preference number: 3 (lower is better)
Translates to: VHSLLEQQASFK*LLQGMLDCIPL
Trigger: GAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
3UTR CCA 72 bp AGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGCTaGACTGTATACCACTCAGATCTTCCCAGCAACAGT +
Preference number: 3 (lower is better)
Translates to: SKLPLNACCRAC*TVYHSDLPSNS
Trigger: ACTGTTGCTGGGAAGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCCAGGCCCCCACAGTaGCGGGCTGTGGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRARPPQ*RAVGSS
Trigger: CGAGGACCCCACAGCCCGCCACTGTGGGGGCCTGGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCAGCCTGGGGCTGCTaGGCCTGGTACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRAAWGC*AWYRSS
Trigger: GCTGCTTCTGTACCAGGCTCAGCAGCCCCAGGCTGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGTTCCACAAGGGCTaGTCTGGGGGTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRWFHKG*SGGPPG
Trigger: GCCTGGGGGACCCCCAGAGCAGCCCTTGTGGAACCA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCCACAAGGGCTGCTCTaGGGGTCCCCCAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRPQGLL*GSPRLG
Trigger: TCCAAGCCTGGGGGACCCCCAGAGCAGCCCTTGTGG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCAGCCTGGGGCTGCTaGGCCTGGTACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGAAWGC*AWYRSS
Trigger: GCTGCTTCTGTACCAGGCTCAGCAGCCCCAGGCTGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGGTTCCACAAGGGCTaGTCTGGGGGTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSWFHKG*SGGPPG
Trigger: GCCTGGGGGACCCCCAGAGCAGCCCTTGTGGAACCA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGTAGCGCCTCAGCTGTaGAGCCTGGGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSVAPQL*SLGLLS
Trigger: GCTCAGCAGCCCCAGGCTGCACAGCTGAGGCGCTAC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGTAGCGCCTCAGCTGTaGAGCCTGGGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGVAPQL*SLGLLS
Trigger: GCTCAGCAGCCCCAGGCTGCACAGCTGAGGCGCTAC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRMLPGS*FPAEPL
Trigger: GAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCAT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCCCAGACGGGGGCTCTaGTGGGTTCTGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRPRRGL*WVLRSQ
Trigger: CTGTGACCTCAGAACCCACCAGAGCCCCCGTCTGGG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGGGGTCCCCCAGGCTTaGACAGCTGAGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRGVPQA*TAEDTR
Trigger: ACGGGTATCCTCAGCTGTCCAAGCCTGGGGGACCCC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCACAAGGGCTGCTCTaGGGGTCCCCCAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGPQGLL*GSPRLG
Trigger: TCCAAGCCTGGGGGACCCCCAGAGCAGCCCTTGTGG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCCTCACCTACCCTCTaGGCCTCCTGTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRASPTL*ASCPED
Trigger: ATCCTCAGGACAGGAGGCTCAGAGGGTAGGTGAGGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGTCCTGCTTCCCAGCTaGGCCCCTCCTGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSVLLPS*APPGHC
Trigger: ACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGAC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCCTCAGGAACCTaGGCCGGATGCTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSGSSGT*AGCCQG
Trigger: ACCCTGGCAGCATCCGGCTCAGGTTCCTGAGGAACC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTGGCTCAGCAGGGATaGAGGGAGGTAGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLAQQG*REVGIR
Trigger: CCTGATCCCTACCTCCCTGCATCCCTGCTGAGCCAG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGACGGGGGCTCTGGTaGGTTCTGAGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRRRGLW*VLRSQR
Trigger: CCTCTGTGACCTCAGAACCCACCAGAGCCCCCGTCT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCCAGACGGGGGCTCTaGTGGGTTCTGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGPRRGL*WVLRSQ
Trigger: CTGTGACCTCAGAACCCACCAGAGCCCCCGTCTGGG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGGGTCCCCCAGGCTTaGACAGCTGAGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGGVPQA*TAEDTR
Trigger: ACGGGTATCCTCAGCTGTCCAAGCCTGGGGGACCCC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCACAAGGGCTGCTCTaGGGGTCCCCCAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLPQGLL*GSPRLG
Trigger: TCCAAGCCTGGGGGACCCCCAGAGCAGCCCTTGTGG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTCTGCTGGCTCAGGTaGCTCCTCAGCATGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLCWLR*LLSMPF
Trigger: GAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCCAGCCTTCAGTCGCTaGCTCAGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSPAFSR*LSRDAG
Trigger: CCCTGCATCCCTGCTGAGCCAGCGACTGAAGGCTGG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTGTGGGGTCCTCGCTaGCTCGGAGAAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLWGPR*LGEEPG
Trigger: ACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTGTGGGGTCCTCGCTaGCTCGGAGAAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLWGPR*LGEEPG
Trigger: ACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGGTCTCTGTGGACTTaGGGTGGCCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGGSLWT*GGPGHL
Trigger: CAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTCTGGTGGGTTCTaGGGTCACAGAGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSGSGGF*GHRGHR
Trigger: GCGATGACCTCTGTGACCTCAGAACCCACCAGAGCC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGGTTCCTCAGGAACCTaGGCCGGATGCTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLGSSGT*AGCCQG
Trigger: ACCCTGGCAGCATCCGGCTCAGGTTCCTGAGGAACC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGTAGGGCCTGCTGCTaGAGAATGATGGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGGRACC*RMMGAD
Trigger: GTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTGGCTCAGCAGGGATaGAGGGAGGTAGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLAQQG*REVGIR
Trigger: CCTGATCCCTACCTCCCTGCATCCCTGCTGAGCCAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCACTGGAGCCTGCCTaGAGTGGGTTTTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRALEPA*SGFSAD
Trigger: GTCAGCTGAAAACCCACTGCAGGCAGGCTCCAGTGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCCAGCACTGGAGCCTaGCTGCAGTGGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGPSTGA*LQWVFS
Trigger: GCTGAAAACCCACTGCAGGCAGGCTCCAGTGCTGGG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLMLPGS*FPAEPL
Trigger: GAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCAT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCCACCGGTAGGGCCTaGTGCTGCAGAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGSTGRA*CCRMMG
Trigger: CCCCATCATTCTGCAGCAGCAGGCCCTACCGGTGGA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGGGAGCCAGGTAGTTaGCGGCAGGATATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRREPGS*RQDMGP
Trigger: AGGACCCATATCCTGCCGCCAACTACCTGGCTCCCT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTAGACGGGGGCTCTGGTaGGTTCTGAGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGRRGLW*VLRSQR
Trigger: CCTCTGTGACCTCAGAACCCACCAGAGCCCCCGTCT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGACGGGGGCTCTGGTaGGTTCTGAGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSRRGLW*VLRSQR
Trigger: CCTCTGTGACCTCAGAACCCACCAGAGCCCCCGTCT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCCAGACGGGGGCTCTaGTGGGTTCTGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLPRRGL*WVLRSQ
Trigger: CTGTGACCTCAGAACCCACCAGAGCCCCCGTCTGGG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGGGGTCCCCCAGGCTTaGACAGCTGAGGATACCCGT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLGVPQA*TAEDTR
Trigger: ACGGGTATCCTCAGCTGTCCAAGCCTGGGGGACCCC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTCTGCTGGCTCAGGTaGCTCCTCAGCATGCCGTTC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLCWLR*LLSMPF
Trigger: GAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTCTGCTGGCTCAGGTaGCTCCTCAGCATGCCGTTC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLCWLR*LLSMPF
Trigger: GAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCAGCCTTCAGTCGCTaGCTCAGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLPAFSR*LSRDAG
Trigger: CCCTGCATCCCTGCTGAGCCAGCGACTGAAGGCTGG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGGGTCTCTGTGGACTTaGGGTGGCCCGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLGSLWT*GGPGHL
Trigger: CAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCAGGGCTGTGTTCTCTaGGAAACTGGTGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGQGCVL*ETGGPI
Trigger: GATGGGGCCACCAGTTTCTCAGAGAACACAGCCCTG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLGSWG*WWAEPC
Trigger: GCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLGSWG*WWAEPC
Trigger: GCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGCAGCCTGGGGCTGCTaGGCCTGGTACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLAAWGC*AWYRSS
Trigger: GCTGCTTCTGTACCAGGCTCAGCAGCCCCAGGCTGC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGTTGAGCTTCTTGTCTaGGCTGGGCAGGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRVELLV*AGQGGF
Trigger: GAAACCTCCCTGCCCAGCTCAGACAAGAAGCTCAAC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGAGCCTCCTGTCCTaGGGATCCATCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLLSLLS*GSIQPQ
Trigger: CTGAGGCTGGATGGATCCTCAGGACAGGAGGCTCAG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCCGTCCTGTGTCCTCTaGCTGGATCTCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRPSCVL*LDLHIH
Trigger: GTGAATGTGGAGATCCAGGCAGAGGACACAGGACGG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTGGTTCCACAAGGGCTaGTCTGGGGGTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLWFHKG*SGGPPG
Trigger: GCCTGGGGGACCCCCAGAGCAGCCCTTGTGGAACCA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSFCRC*TLSRSL
Trigger: GAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGTAGCGCCTCAGCTGTaGAGCCTGGGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLVAPQL*SLGLLS
Trigger: GCTCAGCAGCCCCAGGCTGCACAGCTGAGGCGCTAC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGATGATGGGGGCTGACTaGTGGCGGTTCTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRMMGAD*WRFFSS
Trigger: GCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCAT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGGTAGGGCCTGCTGCTaGAGAATGATGGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLGRACC*RMMGAD
Trigger: GTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGCACTGGAGCCTGCCTaGAGTGGGTTTTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSALEPA*SGFSAD
Trigger: GTCAGCTGAAAACCCACTGCAGGCAGGCTCCAGTGC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTCTGGCCAGGATCCTaGTGCTCAATGACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLWPGS*CSMTSV
Trigger: CACTGAGGTCATTGAGCAGCAGGATCCTGGCCAGAG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGACCTAGGGTCCCTGTaGACATGGAAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSDLGSL*TWKATL
Trigger: CAGTGTGGCCTTCCATGTGCACAGGGACCCTAGGTC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTGGGACACCCACCTGTaGTGGCAGGGTCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLWDTHL*WQGLCG
Trigger: TCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGACCAAGGAAGTCCTGTaGTGGCAGGGTCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRTKEVL*WQGLCG
Trigger: TCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGGGAGCCAGGTAGTTaGCGGCAGGATATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSREPGS*RQDMGP
Trigger: AGGACCCATATCCTGCCGCCAACTACCTGGCTCCCT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTAGGGAGCCAGGTAGTTaGCGGCAGGATATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGREPGS*RQDMGP
Trigger: AGGACCCATATCCTGCCGCCAACTACCTGGCTCCCT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGATGGGGGCTGACTGCTaGCGGTTCTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRMGADC*RFFSSS
Trigger: AGAGCTGGAAAAGAACCGCCAGCAGTCAGCCCCCAT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGTGAAGGTGAGGCTCTaGCCAGGATCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSVKVRL*PGSCCS
Trigger: TGAGCAGCAGGATCCTGGCCAGAGCCTCACCTTCAC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCAGCTGAGCCCCTCCTaGTCACTGTCAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRQLSPS*SLSVLN
Trigger: ATTCAGCACTGACAGTGACCAGGAGGGGCTCAGCTG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCAGTGGAGTAGCCTCCTaGGACACCCACCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSGVAS*DTHLCW
Trigger: CCAGCACAGGTGGGTGTCCCAGGAGGCTACTCCACT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGGGCTGTGTTCTCTaGGAAACTGGTGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLQGCVL*ETGGPI
Trigger: GATGGGGCCACCAGTTTCTCAGAGAACACAGCCCTG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTAGGTTGGTGTCGATaGTGGGAAGCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLGWCR*WEAAPL
Trigger: AAGTGGAGCGGCTTCCCATCATCGACACCAACCTAA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLLGSWG*WWAEPC
Trigger: GCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCAGAATGATGGGGGCTaGCTGCTGGCGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGQNDGG*LLAVLF
Trigger: GAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCAGAATGATGGGGGCTaGCTGCTGGCGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSQNDGG*LLAVLF
Trigger: GAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRDKIRL*ACSSLA
Trigger: GGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGTTGAGCTTCTTGTCTaGGCTGGGCAGGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGVELLV*AGQGGF
Trigger: GAAACCTCCCTGCCCAGCTCAGACAAGAAGCTCAAC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCGGTACAGGTCTTCATaGTCCTGTGCTGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRRYRSS*SCAVRF
Trigger: GAACCTCACAGCACAGGATCATGAAGACCTGTACCG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGGCTGGGTTCCAGTTaGCAGTCTGAGACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSWLGSS*QSETED
Trigger: GTCCTCTGTCTCAGACTGTCAACTGGAACCCAGCCA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGTCCTGCTTCCCAGCTaGGCCCCTCCTGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLVLLPS*APPGHC
Trigger: ACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGAC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGGAAGCCGCTCCACTTaGAGCCCTTGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRGSRST*SPCKCF
Trigger: AAAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGCTCTTCTATGCTCTaGTGGCTCAGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSCSSML*WLRWLL
Trigger: GAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSFCRC*TLSRSL
Trigger: GAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTATGATGGGGGCTGACTaGTGGCGGTTCTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGMMGAD*WRFFSS
Trigger: GCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCAT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCAAGTCCGGTAGGGCCTaGTGCTGCAGAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLKSGRA*CCRMMG
Trigger: CCCCATCATTCTGCAGCAGCAGGCCCTACCGGACTT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCCCATCATTGACTTaGAACTGCACCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSPSLT*NCTPAL
Trigger: CAGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGGAGAAGAGCCAGGTTaGCACAATAGCGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRGEEPG*HNSGTG
Trigger: ACCTGTACCGCTATTGTGGCAACCTGGCTCTTCTCC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTGCCAAATCTCCACCTaGTCCCAACTCCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGCQIST*SQLPGI
Trigger: GATCCCAGGGAGTTGGGAGCAGGTGGAGATTTGGCA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCATCCAGGCGGCCCTGTaGTTCCTCAGGAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSIQAAL*FLRNLC
Trigger: ACAAAGGTTCCTGAGGAACCACAGGGCCGCCTGGAT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCCCAGACGGGGGCTCTaGTGGGTTCTGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLPRRGL*WVLRSQ
Trigger: CTGTGACCTCAGAACCCACCAGAGCCCCCGTCTGGG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTGCCATCTTCTGCATaGCCCGCCGGTAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLPSSA*PAGNCS
Trigger: TGAACAATTACCGGCGGGCCATGCAGAAGATGGCAG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCTTCTATGCTCTGCTaGCTCAGGTGGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGSSMLC*LRWLLS
Trigger: GCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTATGGGGGCTGACTGCTaGCGGTTCTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGMGADC*RFFSSS
Trigger: AGAGCTGGAAAAGAACCGCCAGCAGTCAGCCCCCAT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCATGGGGGCTGACTGCTaGCGGTTCTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSMGADC*RFFSSS
Trigger: AGAGCTGGAAAAGAACCGCCAGCAGTCAGCCCCCAT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCTGACTCCTCCAGCTaGTTTTCCAGGGACAAGATC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRADSSS*FSRDKI
Trigger: GATCTTGTCCCTGGAAAACCAGCTGGAGGAGTCAGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGTGAAGGTGAGGCTCTaGCCAGGATCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLVKVRL*PGSCCS
Trigger: TGAGCAGCAGGATCCTGGCCAGAGCCTCACCTTCAC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGGTAAATGGGGAAGATaGCCTCACCTACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRGKWGR*PHLPSE
Trigger: CTCAGAGGGTAGGTGAGGCCATCTTCCCCATTTACC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAAGGAAGTCCTGTGCTaGCAGGGTCTCTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRKEVLC*QGLCGL
Trigger: AAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTTAGGTTGGTGTCGATaGTGGGAAGCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLGWCR*WEAAPL
Trigger: AAGTGGAGCGGCTTCCCATCATCGACACCAACCTAA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSDKIRL*ACSSLA
Trigger: GGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCATGATCCTGTGCTGTaGGGTTCATTCGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGHDPVL*GSFGAH
Trigger: ATGAGCCCCGAATGAACCTCACAGCACAGGATCATG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTGGCTGGGTTCCAGTTaGCAGTCTGAGACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLWLGSS*QSETED
Trigger: GTCCTCTGTCTCAGACTGTCAACTGGAACCCAGCCA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSRMLA*FFSARM
Trigger: CATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTGCTCTTCTATGCTCTaGTGGCTCAGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLCSSML*WLRWLL
Trigger: GAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCTCTTCCTCCGCCCTaGTCTGCTCTTCTATGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSLPPP*SALLCS
Trigger: AGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCAGCAGTAGCTTCTaGTTCATGGACACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRFSSSF*FMDTAR
Trigger: CCTGGCAGTGTCCATGAAGCAGAAGCTACTGCTGAA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSFCRC*TLSRSL
Trigger: GAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCGAATCAGCTCATTTTaGAGGTGCTGCACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRRISSF*RCCTLS
Trigger: AGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCCCAGCACTGGAGCCTaGCTGCAGTGGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLPSTGA*LQWVFS
Trigger: GCTGAAAACCCACTGCAGGCAGGCTCCAGTGCTGGG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCATTGACTTGCAACTaGACCCCAGCACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSLTCN*TPALEP
Trigger: AGGCTCCAGTGCTGGGGTGCAGTTGCAAGTCAATGA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCCCCATCATTGACTTaGAACTGCACCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGSPSLT*NCTPAL
Trigger: CAGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCTGGCCAGGATCCTaGTGCTCAATGACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLLWPGS*CSMTSV
Trigger: CACTGAGGTCATTGAGCAGCAGGATCCTGGCCAGAG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCCACCGGTAGGGCCTaGTGCTGCAGAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSTGRA*CCRMMG
Trigger: CCCCATCATTCTGCAGCAGCAGGCCCTACCGGTGGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGACGGGGGCTCTGGTaGGTTCTGAGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLRRGLW*VLRSQR
Trigger: CCTCTGTGACCTCAGAACCCACCAGAGCCCCCGTCT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCCTGTGTCCTCTGCCTaGATCTCCACATTCACTGTG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSPVSSA*ISTFTV
Trigger: CACAGTGAATGTGGAGATCCAGGCAGAGGACACAGG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTGGAAGAGGAAGGACTaGTTCCACAAGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGWKRKD*FHKGCS
Trigger: AGAGCAGCCCTTGTGGAACCAGTCCTTCCTCTTCCA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCAGAGGAAAGCAGCTaGAAGGAGAGGTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSEESS*KERFTE
Trigger: CTCGGTGAACCTCTCCTTCCAGCTGCTTTCCTCTGA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGTCTAAGGAGCTCATaGACCAGGATTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSLRSS*TRIHGW
Trigger: CCATCCGTGAATCCTGGTCCATGAGCTCCTTAGACT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCCTCCATTTCCTGAGTaGAGTCTAAGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRPPFPE*SLRSSW
Trigger: CCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTGCCATCTTCTGCATaGCCCGCCGGTAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLPSSA*PAGNCS
Trigger: TGAACAATTACCGGCGGGCCATGCAGAAGATGGCAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTGCCATCTTCTGCATaGCCCGCCGGTAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLPSSA*PAGNCS
Trigger: TGAACAATTACCGGCGGGCCATGCAGAAGATGGCAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCTTCTATGCTCTGCTaGCTCAGGTGGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSSMLC*LRWLLS
Trigger: GCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGCTGACTCCTCCAGCTaGTTTTCCAGGGACAAGATC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSADSSS*FSRDKI
Trigger: GATCTTGTCCCTGGAAAACCAGCTGGAGGAGTCAGC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCTGACTCCTCCAGCTaGTTTTCCAGGGACAAGATC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGADSSS*FSRDKI
Trigger: GATCTTGTCCCTGGAAAACCAGCTGGAGGAGTCAGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTGGTCGTGGGTAAATaGGGAAGATGGCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLVVGK*GRWPHL
Trigger: TAGGTGAGGCCATCTTCCCCATTTACCCACGACCAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCGCCAGGCCCCCACAGTaGCGGGCTGTGGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSARPPQ*RAVGSS
Trigger: CGAGGACCCCACAGCCCGCCACTGTGGGGGCCTGGC...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGCTGAGCCCCTCCTaGTCACTGTCAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLQLSPS*SLSVLN
Trigger: ATTCAGCACTGACAGTGACCAGGAGGGGCTCAGCTG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCAGGGCTGTGTTCTCTaGGAAACTGGTGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLQGCVL*ETGGPI
Trigger: GATGGGGCCACCAGTTTCTCAGAGAACACAGCCCTG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLLGSWG*WWAEPC
Trigger: GCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLDKIRL*ACSSLA
Trigger: GGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSTCSP*KCFPVN
Trigger: GTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGGAAGCCGCTCCACTTaGAGCCCTTGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLGSRST*SPCKCF
Trigger: AAAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTGGTGGGCAGAGCCTTaGTGTTGTTTGGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGWWAEP*CCLVSR
Trigger: TCTTGACACCAAACAACAGCAAGGCTCTGCCCACCA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGGTGGGCAGAGCCTTaGTGTTGTTTGGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSWWAEP*CCLVSR
Trigger: TCTTGACACCAAACAACAGCAAGGCTCTGCCCACCA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGSRMLA*FFSARM
Trigger: CATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCTCTTCCTCCGCCCTaGTCTGCTCTTCTATGCTCT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSLPPP*SALLCS
Trigger: AGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTTCAGCAGTAGCTTCTaGTTCATGGACACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSFSSSF*FMDTAR
Trigger: CCTGGCAGTGTCCATGAAGCAGAAGCTACTGCTGAA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAAGTCCGGTAGGGCCTaGTGCTGCAGAATGATGGGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLKSGRA*CCRMMG
Trigger: CCCCATCATTCTGCAGCAGCAGGCCCTACCGGACTT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGACCTAGGGTCCCTGTaGACATGGAAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLDLGSL*TWKATL
Trigger: CAGTGTGGCCTTCCATGTGCACAGGGACCCTAGGTC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGGGAGCCAGGTAGTTaGCGGCAGGATATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLREPGS*RQDMGP
Trigger: AGGACCCATATCCTGCCGCCAACTACCTGGCTCCCT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGACCAGGATTCACGGATaGCACCCAGATTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRTRIHG*HPDSHL
Trigger: TAGATGAGAATCTGGGTGCCATCCGTGAATCCTGGT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGTCTAAGGAGCTCATaGACCAGGATTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSLRSS*TRIHGW
Trigger: CCATCCGTGAATCCTGGTCCATGAGCTCCTTAGACT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCTCCATTTCCTGAGTaGAGTCTAAGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGPPFPE*SLRSSW
Trigger: CCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCCTCCATTTCCTGAGTaGAGTCTAAGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSPPFPE*SLRSSW
Trigger: CCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCTCTTGAAGACGAATaGCCAGGTTTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRALEDE*PGFASL
Trigger: GAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAAAGTTCATTGGCGATaGGATAGGGAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRKVHWR*DREGNL
Trigger: CAGGTTTCCTTCCCTATCTCATCGCCAATGAACTTT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCAGAATGATGGGGGCTaGCTGCTGGCGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLQNDGG*LLAVLF
Trigger: GAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGTTGAGCTTCTTGTCTaGGCTGGGCAGGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLVELLV*AGQGGF
Trigger: GAAACCTCCCTGCCCAGCTCAGACAAGAAGCTCAAC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGGTCCTGCTTCCCAGCTaGGCCCCTCCTGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: VHSLLEQQASFKCLLQGMVLLPS*APPGHC
Trigger: ACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGAC...CATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCCGTCCTGTGTCCTCTaGCTGGATCTCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLPSCVL*LDLHIH
Trigger: GTGAATGTGGAGATCCAGGCAGAGGACACAGGACGG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSTCSP*KCFPVN
Trigger: GTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTGGTGGGCAGAGCCTTaGTGTTGTTTGGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLWWAEP*CCLVSR
Trigger: TCTTGACACCAAACAACAGCAAGGCTCTGCCCACCA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSRMLA*FFSARM
Trigger: CATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTCAGCAGTAGCTTCTaGTTCATGGACACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLFSSSF*FMDTAR
Trigger: CCTGGCAGTGTCCATGAAGCAGAAGCTACTGCTGAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSFCRC*TLSRSL
Trigger: GAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGATGATGGGGGCTGACTaGTGGCGGTTCTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLMMGAD*WRFFSS
Trigger: GCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCAT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTGCCAAATCTCCACCTaGTCCCAACTCCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLCQIST*SQLPGI
Trigger: GATCCCAGGGAGTTGGGAGCAGGTGGAGATTTGGCA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCTTCTATGCTCTGCTaGCTCAGGTGGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSSMLC*LRWLLS
Trigger: GCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCTCCAGCATTAGGCTaGTCTATGATGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRAPALG*SMMMEF
Trigger: AAACTCCATCATCATAGACCAGCCTAATGCTGGAGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACCCAGCCTTCAGTCGCTaGCTCAGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLEQQASFKCLLQGMLDPAFSR*LSRDAG
Trigger: CCCTGCATCCCTGCTGAGCCAGCGACTGAAGGCTGG...GTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGTAGCTTCTGCTTCATaGACACCAGGTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSVASAS*TPGSLP
Trigger: AGGAAGAGAACCTGGTGTCCATGAAGCAGAAGCTAC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119665.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTAAAGTTCATTGGCGATaGGATAGGGAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGKVHWR*DREGNL
Trigger: CAGGTTTCCTTCCCTATCTCATCGCCAATGAACTTT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLDKIRL*ACSSLA
Trigger: GGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACTGTATACCACTCAGATCTGCCTCACCTACCCTCTaGGCCTCCTGTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: ASFKCLLQGMLDCIPLRSASPTL*ASCPED
Trigger: ATCCTCAGGACAGGAGGCTCAGAGGGTAGGTGAGGC...AGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCATGATCCTGTGCTGTaGGGTTCATTCGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLHDPVL*GSFGAH
Trigger: ATGAGCCCCGAATGAACCTCACAGCACAGGATCATG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLSTCSP*KCFPVN
Trigger: GTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCTCTTCCTCCGCCCTaGTCTGCTCTTCTATGCTCT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSLPPP*SALLCS
Trigger: AGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCTTTCTTCCAATATCTaGTCCATCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRLSSNI*SIFSIT
Trigger: GGTGATCGAGAAGATGGAGCAGATATTGGAAGAAAG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGGCTTTCTCTGATGTaGTTTTTACCACCACGTAGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSWLSLM*FLPPRR
Trigger: CCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTGGAAGAGGAAGGACTaGTTCCACAAGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLWKRKD*FHKGCS
Trigger: AGAGCAGCCCTTGTGGAACCAGTCCTTCCTCTTCCA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCAGAGGAAAGCAGCTaGAAGGAGAGGTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSEESS*KERFTE
Trigger: CTCGGTGAACCTCTCCTTCCAGCTGCTTTCCTCTGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSLAVV*CQEVFW
Trigger: CCAGAAAACTTCTTGACACCAAACAACAGCAAGGCT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTGCCATCTTCTGCATaGCCCGCCGGTAATTGTTCA +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLLPSSA*PAGNCS
Trigger: TGAACAATTACCGGCGGGCCATGCAGAAGATGGCAG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTTTCTGCTAGCAGCATaGAGTAAAGGTCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSFLLAA*SKGQQP
Trigger: TGGCTGTTGACCTTTACTCCATGCTGCTAGCAGAAA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCTCTTGAAGACGAATaGCCAGGTTTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLALEDE*PGFASL
Trigger: GAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCTCCAGCATTAGGCTaGTCTATGATGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGAPALG*SMMMEF
Trigger: AAACTCCATCATCATAGACCAGCCTAATGCTGGAGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGCTCCAGCATTAGGCTaGTCTATGATGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSAPALG*SMMMEF
Trigger: AAACTCCATCATCATAGACCAGCCTAATGCTGGAGC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGGTAAATGGGGAAGATaGCCTCACCTACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLGKWGR*PHLPSE
Trigger: CTCAGAGGGTAGGTGAGGCCATCTTCCCCATTTACC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTGGTCGTGGGTAAATaGGGAAGATGGCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLLVVGK*GRWPHL
Trigger: TAGGTGAGGCCATCTTCCCCATTTACCCACGACCAG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSFVGFL*CGFYHH
Trigger: GTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGFVGFL*CGFYHH
Trigger: GTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCAAAGTTCATTGGCGATaGGATAGGGAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLKVHWR*DREGNL
Trigger: CAGGTTTCCTTCCCTATCTCATCGCCAATGAACTTT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TGTATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCCTGAGCCTCCTGTCCTaGGGATCCATCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CIPLRSSQQQWTWELFSSLSLLS*GSIQPQ
Trigger: CTGAGGCTGGATGGATCCTCAGGACAGGAGGCTCAG...GGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR TCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCAGAGCTCCAAATATTaGTTTTGGGTTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRQSSKY*FWVCVQ
Trigger: CTGTACACAAACCCAAAATCAATATTTGGAGCTCTG...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTGGTGGGCAGAGCCTTaGTGTTGTTTGGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLWWAEP*CCLVSR
Trigger: TCTTGACACCAAACAACAGCAAGGCTCTGCCCACCA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSRMLA*FFSARM
Trigger: CATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCGAATCAGCTCATTTTaGAGGTGCTGCACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLRISSF*RCCTLS
Trigger: AGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTTTCTTCCAATATCTaGTCCATCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLSSNI*SIFSIT
Trigger: GGTGATCGAGAAGATGGAGCAGATATTGGAAGAAAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCTTTCTTCCAATATCTaGTCCATCTTCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGLSSNI*SIFSIT
Trigger: GGTGATCGAGAAGATGGAGCAGATATTGGAAGAAAG...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp TGTATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCCCCAGCACTGGAGCCTaGCTGCAGTGGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: CIPLRSSQQQWTWELFSSPSTGA*LQWVFS
Trigger: GCTGAAAACCCACTGCAGGCAGGCTCCAGTGCTGGG...GGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACGACCTAGGGTCCCTGTaGACATGGAAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: SLLEQQASFKCLLQGMLDDLGSL*TWKATL
Trigger: CAGTGTGGCCTTCCATGTGCACAGGGACCCTAGGTC...GTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSMLPGS*FPAEPL
Trigger: GAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCAT...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGAGGACTGTGTTTGTTaGCTTTCTCTGATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGEDCVC*LSLMWF
Trigger: AAACCACATCAGAGAAAGCCAACAAACACAGTCCTC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGAGGACTGTGTTTGTTaGCTTTCTCTGATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSEDCVC*LSLMWF
Trigger: AAACCACATCAGAGAAAGCCAACAAACACAGTCCTC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSLAVV*CQEVFW
Trigger: CCAGAAAACTTCTTGACACCAAACAACAGCAAGGCT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGTCTAAGGAGCTCATaGACCAGGATTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSLRSS*TRIHGW
Trigger: CCATCCGTGAATCCTGGTCCATGAGCTCCTTAGACT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTTCTGCTAGCAGCATaGAGTAAAGGTCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLFLLAA*SKGQQP
Trigger: TGGCTGTTGACCTTTACTCCATGCTGCTAGCAGAAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCTCCAGCATTAGGCTaGTCTATGATGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLAPALG*SMMMEF
Trigger: AAACTCCATCATCATAGACCAGCCTAATGCTGGAGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACGTGAAGGTGAGGCTCTaGCCAGGATCCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLEQQASFKCLLQGMLDVKVRL*PGSCCS
Trigger: TGAGCAGCAGGATCCTGGCCAGAGCCTCACCTTCAC...GTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCCTGTGGGGTCCTCGCTaGCTCGGAGAAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSLWGPR*LGEEPG
Trigger: ACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAG...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGACTGTCAGTGCTGAATaGGCTCATATAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: ASLGARESPAHGEGDLLRTVSAE*AHIRFF
Trigger: GAAGAATCTTATATGAGCCCATTCAGCACTGACAGT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLFVGFL*CGFYHH
Trigger: GTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGTGGCTGGGTTCCAGTTaGCAGTCTGAGACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VHSLLEQQASFKCLLQGMWLGSS*QSETED
Trigger: GTCCTCTGTCTCAGACTGTCAACTGGAACCCAGCCA...CATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSTCSP*KCFPVN
Trigger: GTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR GCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCCTGGCTCAGCAGGGATaGAGGGAGGTAGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSLAQQG*REVGIR
Trigger: CCTGATCCCTACCTCCCTGCATCCCTGCTGAGCCAG...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGAGGACTGTGTTTGTTaGCTTTCTCTGATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KASLGARESPAHGEGDLLEDCVC*LSLMWF
Trigger: AAACCACATCAGAGAAAGCCAACAAACACAGTCCTC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGACCAGGATTCACGGATaGCACCCAGATTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLTRIHG*HPDSHL
Trigger: TAGATGAGAATCTGGGTGCCATCCGTGAATCCTGGT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGCTCTTGAAGACGAATaGCCAGGTTTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLALEDE*PGFASL
Trigger: GAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTACTGTCAGTGCTGAATaGGCTCATATAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGTVSAE*AHIRFF
Trigger: GAAGAATCTTATATGAGCCCATTCAGCACTGACAGT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAAAGTTCATTGGCGATaGGATAGGGAAGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLKVHWR*DREGNL
Trigger: CAGGTTTCCTTCCCTATCTCATCGCCAATGAACTTT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp GCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACTGTATACCACTCAGATCTCATGATCCTGTGCTGTaGGGTTCATTCGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASFKCLLQGMLDCIPLRSHDPVL*GSFGAH
Trigger: ATGAGCCCCGAATGAACCTCACAGCACAGGATCATG...AGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATGCACTGGAGCCTGCCTaGAGTGGGTTTTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHALEPA*SGFSAD
Trigger: GTCAGCTGAAAACCCACTGCAGGCAGGCTCCAGTGC...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp GTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGTCATTGACTTGCAACTaGACCCCAGCACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VHSLLEQQASFKCLLQGMSLTCN*TPALEP
Trigger: AGGCTCCAGTGCTGGGGTGCAGTTGCAAGTCAATGA...CATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGTCCTGTGTTCTCATaGCACCAGAGCTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSPVFS*HQSSKY
Trigger: ATATTTGGAGCTCTGGTGGCATGAGAACACAGGACT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTGGCTTTCTCTGATGTaGTTTTTACCACCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLWLSLM*FLPPRR
Trigger: CCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTTTCTGCTAGCAGCATaGAGTAAAGGTCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLFLLAA*SKGQQP
Trigger: TGGCTGTTGACCTTTACTCCATGCTGCTAGCAGAAA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp GCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACTGTATACCACTCAGATCTGGTAAATGGGGAAGATaGCCTCACCTACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ASFKCLLQGMLDCIPLRSGKWGR*PHLPSE
Trigger: CTCAGAGGGTAGGTGAGGCCATCTTCCCCATTTACC...AGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR TCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLFVGFL*CGFYHH
Trigger: GTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR TCA 90 bp TGTATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCCGGTACAGGTCTTCATaGTCCTGTGCTGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: CIPLRSSQQQWTWELFSSRYRSS*SCAVRF
Trigger: GAACCTCACAGCACAGGATCATGAAGACCTGTACCG...GGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCCTCTGGCCAGGATCCTaGTGCTCAATGACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSLWPGS*CSMTSV
Trigger: CACTGAGGTCATTGAGCAGCAGGATCCTGGCCAGAG...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LKASLGARESPAHGEGDLSLAVV*CQEVFW
Trigger: CCAGAAAACTTCTTGACACCAAACAACAGCAAGGCT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CCA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATCAGCTGAGCCCCTCCTaGTCACTGTCAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHQLSPS*SLSVLN
Trigger: ATTCAGCACTGACAGTGACCAGGAGGGGCTCAGCTG...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR TCA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATTGGGGAAGCAGAGGCTaGGAAAATCCTGTAACTGGG +
Preference number: 4 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHWGSRG*ENPVTG
Trigger: CCCAGTTACAGGATTTTCTCAGCCTCTGCTTCCCCA...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATTCCCCATCATTGACTTaGAACTGCACCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHSPSLT*NCTPAL
Trigger: CAGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGA...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR GCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCGGAGAAGAGCCAGGTTaGCACAATAGCGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSGEEPG*HNSGTG
Trigger: ACCTGTACCGCTATTGTGGCAACCTGGCTCTTCTCC...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp GCAATCTTGTTTTCTAGGTGCAGAAACGGAGGCCTGAACTATGTCTTGTTCAGCCTGGTCGTGGGTAAATaGGGAAGATGGCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: AILFSRCRNGGLNYVLFSLVVGK*GRWPHL
Trigger: TAGGTGAGGCCATCTTCCCCATTTACCCACGACCAG...GCTGAACAAGACATAGTTCAGGCCTCCGTTTCTGCACCTAGAAAACAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
3UTR CAA 72 bp TATGTCTTGTTCAGCGCAGATTCTTCTGTGCACTCATaGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YVLFSADSSVHS*LEQQASFKCLL
Trigger: CAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCACAGAAGAATCTGCGCTGAACAAGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CCA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATACTGTCAGTGCTGAATaGGCTCATATAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHTVSAE*AHIRFF
Trigger: GAAGAATCTTATATGAGCCCATTCAGCACTGACAGT...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS TCA 90 bp GGGTCCTGGGAGGTATCCAGGCGGCCCTGTGGTTCCTCAGGAACCTaGGCCGGATGCTGCCAGGGTCCTGCTTCCCAGCTGAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: GSWEVSRRPCGSSGT*AGCCQGPASQLSPS
Trigger: GGAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGTTCCTGAGGAACCACAGGGCCGCCTGGATACCTCCCAGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp TGGAGCAGCCTGGGCAGTGGAGTAGCCTCCTGGGACACCCACCTGTaGTGGCAGGGTCTCTGTGGACTTGGGGTGGCCCGGGCCATTTGT +
Preference number: 5 (lower is better)
Translates to: WSSLGSGVASWDTHL*WQGLCGLGVARAIC
Trigger: ACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCAGGAGGCTACTCCACTGCCCAGGCTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CCA 90 bp AGCAGCCTGGGCAGTGGAGTAGCCTCCTGGGACACCCACCTGTGCTaGCAGGGTCTCTGTGGACTTGGGGTGGCCCGGGCCATTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SSLGSGVASWDTHLC*QGLCGLGVARAICV
Trigger: GACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCAGGAGGCTACTCCACTGCCCAGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CCA 90 bp CATGGAAGGCCACACTGTAAGCCAGGCCCCCACAGTGGCGGGCTGTaGGGTCCTCGCTGGCTCGGAGAAGAGCCAGGTTGCCACAATAGC +
Preference number: 5 (lower is better)
Translates to: HGRPHCKPGPHSGGL*GPRWLGEEPGCHNS
Trigger: GCTATTGTGGCAACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAGCCCGCCACTGTGGGGGCCTGGCTTACAGTGTGGCCTTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTACACCCAGGGGCTGGTaGAGGGCCCATGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGTPRGW*RAHGSL
Trigger: CAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGGGTCTCTGTGGACTaGGGGTGGCCCGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRRVSVD*GWPGPF
Trigger: AAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCACACCCAGGGGCTGGTaGAGGGCCCATGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLTPRGW*RAHGSL
Trigger: CAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp ACTGCCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCTTCTATGCTCTaGTGGCTCAGGTGGCTCCTCAGCATGCCGTTCTCCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TARFSSSALLCSSML*WLRWLLSMPFSSSR
Trigger: CCTGGAGGAGGAGAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp TTCCCTCTTCAACAGCTCTGCCTGAGCCGGATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTCCTGGTCACTGTCAGTGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: FPLQQLCLSRMLPGS*FPAEPLLVTVSAEW
Trigger: CCATTCAGCACTGACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTGAAGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS GCA 90 bp GACACCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCTTCTATGCTCTaGTGGCTCAGGTGGCTCCTCAGCATGCCGTTCTCCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DTRFSSSALLCSSML*WLRWLLSMPFSSSR
Trigger: CCTGGAGGAGGAGAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119665.2
CDS CCA 90 bp ACCAGGGCTGTGTTCTCTGAGAAACTGGTGGCCCCATCTCGGGCTTaGAAGAGGAAGGACTGGTTCCACAAGGGCTGCTCTGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TRAVFSEKLVAPSRA*KRKDWFHKGCSGGP
Trigger: GGGACCCCCAGAGCAGCCCTTGTGGAACCAGTCCTTCCTCTTCCAAGCCCGAGATGGGGCCACCAGTTTCTCAGAGAACACAGCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp TGGAGTAGCCTCCTGGGACACCCACCTGTGCTGGCAGGGTCTCTGTaGACTTGGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: WSSLLGHPPVLAGSL*TWGGPGHLCLVAFL
Trigger: CAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCAGGAGGCTACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGGGAAGCCGCTCCACTaGCAGCCCTTGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRGKPLH*QPLQVF
Trigger: AAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCCC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 90 bp CAACTGCACCCCAGCACTGGAGCCTGCCTGCAGTGGGTTTTCAGCTaGCAGCCTCAGGGCGTACCGGCCCTCCTCATTAAATCCCACACT +
Preference number: 5 (lower is better)
Translates to: QLHPSTGACLQWVFS*QPQGVPALLIKSHT
Trigger: AGTGTGGGATTTAATGAGGAGGGCCGGTACGCCCTGAGGCTGTCAGCTGAAAACCCACTGCAGGCAGGCTCCAGTGCTGGGGTGCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp CCTCCAGAGCTGTATGGTCACAGCCAACGTAGCGGGGAAGTAAGCTaGCCTTCCGAACCACGGTGGCATACAGGCAGGTCTTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PPELYGHSQRSGEVS*PSEPRWHTGRSWQQ
Trigger: CTGCTGCCAAGACCTGCCTGTATGCCACCGTGGTTCGGAAGGGCAGCTTACTTCCCCGCTACGTTGGCTGTGACCATACAGCTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS GCA 90 bp TGGACACTGCCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCTTCTATaGTCTGCTGGCTCAGGTGGCTCCTCAGCATGCCGTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WTLPGSLPPPCSALL*SAGSGGSSACRSPP
Trigger: AGGAGGAGAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGCAGTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 90 bp CCTGGGACACCCACCTGTGCTGGCAGGGTCTCTGTGGACTTGGGGTaGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCCAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: PGTPTCAGRVSVDLG*PGPFVSCSLSAKSP
Trigger: TGGAGATTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CCA 90 bp AGCCTCCTGGGACACCCACCTGTGCTGGCAGGGTCTCTGTGGACTTaGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: SLLGHPPVLAGSLWT*GGPGHLCLVAFLPN
Trigger: ATTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCCAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGACACCCAGGGGCTGGTaGAGGGCCCATGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLTPRGW*RAHGSL
Trigger: CAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGACGAATGGCCAGGTTTaGCTTCTCTCGTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRTNGQV*LLSCPV
Trigger: CACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGCCCGGGCCATTaGTGTCTTGTAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSGGPGH*CLVAFL
Trigger: CAGAAAGGCTACAAGACACAAATGGCCCGGGCCACC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS TCA 90 bp GAGGCTCTGGCCAGGATCCTGCTGCTCAATGACCTCAGTGACAGCTaGGCAGGCTGGAAGGGGGTCCCCATCATTGACTTGCAACTGCAC +
Preference number: 5 (lower is better)
Translates to: EALARILLLNDLSDS*AGWKGVPIIDLQLH
Trigger: GTGCAGTTGCAAGTCAATGATGGGGACCCCCTTCCAGCCTGCTCAGCTGTCACTGAGGTCATTGAGCAGCAGGATCCTGGCCAGAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS TCA 90 bp ACTGGGGATTTCCAGTTCAAAGTTTCCCTCTTCAACAGCTCTGCCTaGGCCGGATGCTGCCAGGGTCCTGCTTCCCAGCTGAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TGDFQFKVSLFNSSA*AGCCQGPASQLSPS
Trigger: GGAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTGAAGAGGGAAACTTTGAACTGGAAATCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS GCA 90 bp TCATGGACACCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCTTCTATaGTCTGCTGGCTCAGGTGGCTCCTCAGCATGCCGTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SWTPGSLPPPCSALL*SAGSGGSSACRSPP
Trigger: AGGAGGAGAACGGCATGCTGAGGAGCCACCTGAGCCAGCAGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGTGTCCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119665.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGATGGTGGGCAGAGCCTaGCTGTTGTTTGGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRMVGRA*LLFGVK
Trigger: CTTGACACCAAACAACAGCAAGGCTCTGCCCACCAT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCCGAATCAGCTCATTTaGCAGGTGCTGCACCCTGTC +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSPNQLI*QVLHPV
Trigger: GACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCCCTGTGGCCTGTTaGATGGTATTGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSPVAC*MVLVPS
Trigger: GGAAGGAACCAATACCATCAAACAGGCCACAGGGGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGAGTCTGAGGGTCTGTaGAGCTTCTTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRESEGL*SFLSEL
Trigger: CAGCTCAGACAAGAAGCTCAACAGACCCTCAGACTC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGAGGGTCTCTGTGGACTaGGGGTGGCCCGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLRVSVD*GWPGPF
Trigger: AAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp AGGTGGCTCCTCAGCATGCCGTTCTCCTCCTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATGTCCTCTGCCATCTTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: RWLLSMPFSSSRMLA*FFSARMSSAIFCMA
Trigger: GGCCATGCAGAAGATGGCAGAGGACATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGAGGAGGAGAACGGCATGCTGAGGAGCCACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp CCACCAAGGAAGTCCTGTGCTGGCAGGGTCTCTGTGGACTTGGGGTaGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCCAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: PPRKSCAGRVSVDLG*PGPFVSCSLSAKSP
Trigger: TGGAGATTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGAGCTCCTTCTTCCTCTaGTTGTCCATCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSSFFL*LSITLR
Trigger: CCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCT...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCATACAGGCAGGTCTaGGCAGCAGCTTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRAYRQV*AAASSF
Trigger: AAAAGATGAAGCTGCTGCCAAGACCTGCCTGTATGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCATTACCACCATGGGCTaGAGGCTGTTGACTAAGGGC +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSITTMG*RLLTKG
Trigger: GCCCTTAGTCAACAGCCTCAAGCCCATGGTGGTAAT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGCTCACTGCTTTGCATaGAGGCAGAGGGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSAHCFA*RQRGST
Trigger: AGTACTACCCCTCTGCCTCAATGCAAAGCAGTGAGC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTATGGTGGGCAGAGCCTaGCTGTTGTTTGGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGMVGRA*LLFGVK
Trigger: CTTGACACCAAACAACAGCAAGGCTCTGCCCACCAT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCTCATCTAGGATCTaGGGGTTGATGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRFSSRI*GLMVGR
Trigger: TCTGCCCACCATCAACCCCAAGATCCTAGATGAGAA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCGAATCAGCTCATTTaGCAGGTGCTGCACCCTGTC +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLPNQLI*QVLHPV
Trigger: GACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTCCCCTGTGGCCTGTTaGATGGTATTGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGSPVAC*MVLVPS
Trigger: GGAAGGAACCAATACCATCAAACAGGCCACAGGGGA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCCAGGAGGTTAAACTaGTCTGAAGTACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRARRLN*SEVPPR
Trigger: CCTTGGTGGTACTTCAGACAAGTTTAACCTCCTGGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCCGTGTTGTTGCTCTaGAAGACGAATGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGAVLLL*KTNGQV
Trigger: AACCTGGCCATTCGTCTTCAAGAGCAACAACACGGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGAGTCTGAGGGTCTGTaGAGCTTCTTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSESEGL*SFLSEL
Trigger: CAGCTCAGACAAGAAGCTCAACAGACCCTCAGACTC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGTCCCCATCATTGACTaGCAACTGCACCCCAGCACT +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLVPIID*QLHPST
Trigger: AGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGAC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp CAGCATGCCGTTCTCCTCCTCCAGGATGTTAGCCTGCTTCTTCAGTaGCAGGATGTCCTCTGCCATCTTCTGCATGGCCCGCCGGTAATT +
Preference number: 5 (lower is better)
Translates to: QHAVLLLQDVSLLLQ*QDVLCHLLHGPPVI
Trigger: AATTACCGGCGGGCCATGCAGAAGATGGCAGAGGACATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGAGGAGGAGAACGGCATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp TGTAACTGGGGATTTCCAGTTCAAAGTTTCCCTCTTCAACAGCTCTaGCTGAGCCGGATGCTGCCAGGGTCCTGCTTCCCAGCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: CNWGFPVQSFPLQQL*LSRMLPGSCFPAEP
Trigger: GGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTGAAGAGGGAAACTTTGAACTGGAAATCCCCAGTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS CCA 90 bp TGTCTGAAGTACCACCAAGGAAGTCCTGTGCTGGCAGGGTCTCTGTaGACTTGGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: CLKYHQGSPVLAGSL*TWGGPGHLCLVAFL
Trigger: CAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGTGGTACTTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTGCCGGCAGGAAGGTaGGTAGCTCCATATAGAGTG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLLPAGR*VAPYRV
Trigger: CACTCTATATGGAGCTACCAACCTTCCTGCCGGCAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTCCTTCTTCCTCTTGTaGTCCATCACCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRSFFLL*SITLRI
Trigger: GATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGA...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAGCTCCTTCTTCCTCTaGTTGTCCATCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSSSFFL*LSITLR
Trigger: CCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCT...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCATACAGGCAGGTCTaGGCAGCAGCTTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGAYRQV*AAASSF
Trigger: AAAAGATGAAGCTGCTGCCAAGACCTGCCTGTATGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCATTACCACCATGGGCTaGAGGCTGTTGACTAAGGGC +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLITTMG*RLLTKG
Trigger: GCCCTTAGTCAACAGCCTCAAGCCCATGGTGGTAAT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCTCACTGCTTTGCATaGAGGCAGAGGGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLAHCFA*RQRGST
Trigger: AGTACTACCCCTCTGCCTCAATGCAAAGCAGTGAGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTCCACTTGCAGCCCTaGCAAGTGTTTTCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLHLQP*QVFSCQ
Trigger: TTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGGGAAGCCGCTCCACTaGCAGCCCTTGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLGKPLH*QPLQVF
Trigger: AAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCCC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGAGGGGGCTTCTCCATaGATGGTTTTTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGEGASP*MVFRLV
Trigger: CACCAACCTAAAAACCATCAATGGAGAAGCCCCCTC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCATGGTGGGCAGAGCCTaGCTGTTGTTTGGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLMVGRA*LLFGVK
Trigger: CTTGACACCAAACAACAGCAAGGCTCTGCCCACCAT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTTCTCATCTAGGATCTaGGGGTTGATGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSFSSRI*GLMVGR
Trigger: TCTGCCCACCATCAACCCCAAGATCCTAGATGAGAA...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGCCTGTTTGATGGTATaGGTTCCTTCCTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLRACLMV*VPSSHR
Trigger: TCTGTGAGAGGAAGGAACCAATACCATCAAACAGGC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCCCCTGTGGCCTGTTaGATGGTATTGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLSPVAC*MVLVPS
Trigger: GGAAGGAACCAATACCATCAAACAGGCCACAGGGGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGCCAGGAGGTTAAACTaGTCTGAAGTACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSARRLN*SEVPPR
Trigger: CCTTGGTGGTACTTCAGACAAGTTTAACCTCCTGGC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCCGTGTTGTTGCTCTaGAAGACGAATGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLAVLLL*KTNGQV
Trigger: AACCTGGCCATTCGTCTTCAAGAGCAACAACACGGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGAGTCTGAGGGTCTGTaGAGCTTCTTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLESEGL*SFLSEL
Trigger: CAGCTCAGACAAGAAGCTCAACAGACCCTCAGACTC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGGTGGCCCGGGCCATTaGTGTCTTGTAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLGGPGH*CLVAFL
Trigger: CAGAAAGGCTACAAGACACAAATGGCCCGGGCCACC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp CTGTCTCGCAGCCTCTTCATATCCAGTTCGTTCAGCAGTAGCTTCTaGTTCATGGACACTGCCAGGTTCTCTTCCTCCGCCCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSRSLFISSSFSSSF*FMDTARFSSSALLC
Trigger: GCAGAGCAGGGCGGAGGAAGAGAACCTGGCAGTGTCCATGAAGCAGAAGCTACTGCTGAACGAACTGGATATGAAGAGGCTGCGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 90 bp TGGTATAGACGAGATTTCAGTGGTAACACCGATACACCCAGGGGCTaGTTGAGGGCCCATGGCTCACTGCTTTGCATTGAGGCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: WYRRDFSGNTDTPRG*LRAHGSLLCIEAEG
Trigger: CCCCTCTGCCTCAATGCAAAGCAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGTATCGGTGTTACCACTGAAATCTCGTCTATACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp CAGGTCTTCATGATCCTGTGCTGTGAGGTTCATTCGGGGCTCATCTaGTCGTGGGTAAATGGGGAAGATGGCCTCACCTACCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: QVFMILCCEVHSGLI*SWVNGEDGLTYPLS
Trigger: GCTCAGAGGGTAGGTGAGGCCATCTTCCCCATTTACCCACGACCAGATGAGCCCCGAATGAACCTCACAGCACAGGATCATGAAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 90 bp AAGTACCACCAAGGAAGTCCTGTGCTGGCAGGGTCTCTGTGGACTTaGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: KYHQGSPVLAGSLWT*GGPGHLCLVAFLPN
Trigger: ATTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGTGGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCAGCTCCTTCTTCCTCTaGTTGTCCATCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLSSFFL*LSITLR
Trigger: CCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTCCACTTGCAGCCCTaGCAAGTGTTTTCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLLHLQP*QVFSCQ
Trigger: TTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGGAGCCTTGCTGTTGTTaGGTGTCAAGAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: ASLGARESPAHGEGDLLREPCCC*VSRSFL
Trigger: CAGAAAACTTCTTGACACCAAACAACAGCAAGGCTC...CCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGGCAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGGRALL*FGVKKF
Trigger: AAACTTCTTGACACCAAACAACAGCAAGGCTCTGCC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGCAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSGRALL*FGVKKF
Trigger: AAACTTCTTGACACCAAACAACAGCAAGGCTCTGCC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTCTCATCTAGGATCTaGGGGTTGATGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLFSSRI*GLMVGR
Trigger: TCTGCCCACCATCAACCCCAAGATCCTAGATGAGAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCCGAATCAGCTCATTTaGCAGGTGCTGCACCCTGTC +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLPNQLI*QVLHPV
Trigger: GACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTGCCTGTTTGATGGTATaGGTTCCTTCCTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGACLMV*VPSSHR
Trigger: TCTGTGAGAGGAAGGAACCAATACCATCAAACAGGC...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCCAGGAGGTTAAACTaGTCTGAAGTACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLARRLN*SEVPPR
Trigger: CCTTGGTGGTACTTCAGACAAGTTTAACCTCCTGGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGACGAATGGCCAGGTTTaGCTTCTCTCGTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLTNGQV*LLSCPV
Trigger: CACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCCTGTCCAAAGCCGTGTaGTTGCTCTTGAAGACGAAT +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSLSKAV*LLLKTN
Trigger: ATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAG...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGTCCCCATCATTGACTaGCAACTGCACCCCAGCACT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLVPIID*QLHPST
Trigger: AGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGAC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp TTAAACTTGTCTGAAGTACCACCAAGGAAGTCCGGTAGGGCCTGCTaGTGCAGAATGATGGGGGCTGACTGCTGGCGGTTCTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LNLSEVPPRKSGRAC*CRMMGADCWRFFSS
Trigger: GCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACCGGACTTCCTTGGTGGTACTTCAGACAAGTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS GCA 90 bp GGGCAGGGAGGTTTCCAGTTTCGAGAGCTGCTGGCGATTCTTGGATaGTCCAGCATTAGGCTGGTCTATGATGATGGAGTTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GQGGFQFRELLAILG*SSIRLVYDDGVWWL
Trigger: CAGCCACCAAACTCCATCATCATAGACCAGCCTAATGCTGGAGCATCCAAGAATCGCCAGCAGCTCTCGAAACTGGAAACCTCCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp CTGTCTCGCAGCCTCTTCATATCCAGTTCGTTCAGCAGTAGCTTCTaGTTCATGGACACCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSRSLFISSSFSSSF*FMDTRFSSSALLCS
Trigger: AGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGTGTCCATGAAGCAGAAGCTACTGCTGAACGAACTGGATATGAAGAGGCTGCGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119665.2
CDS CCA 90 bp AGTTTGGTGGCTGTCCAAAGCCGTGTTGTTGCTCTTGAAGACGAATaGCCAGGTTTTGCTTCTCTCGTGCCCAGTGGCGAGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: SLVAVQSRVVALEDE*PGFASLVPSGELTP
Trigger: AGGAGTCAGCTCGCCACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTTGCCGGCAGGAAGGTaGGTAGCTCCATATAGAGTG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLLPAGR*VAPYRV
Trigger: CACTCTATATGGAGCTACCAACCTTCCTGCCGGCAA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTCCTTCTTCCTCTTGTaGTCCATCACCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLSFFLL*SITLRI
Trigger: GATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGATTACCACCATGGGCTaGAGGCTGTTGACTAAGGGC +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLITTMG*RLLTKG
Trigger: GCCCTTAGTCAACAGCCTCAAGCCCATGGTGGTAAT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGCTCACTGCTTTGCATaGAGGCAGAGGGGTAGTACT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLAHCFA*RQRGST
Trigger: AGTACTACCCCTCTGCCTCAATGCAAAGCAGTGAGC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGAGCCTTGCTGTTGTTaGGTGTCAAGAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RRLWGHVNPQHMAKEICSEPCCC*VSRSFL
Trigger: CAGAAAACTTCTTGACACCAAACAACAGCAAGGCTC...GGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGCCTGTTTGATGGTATaGGTTCCTTCCTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLACLMV*VPSSHR
Trigger: TCTGTGAGAGGAAGGAACCAATACCATCAAACAGGC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGCCGTGTTGTTGCTCTaGAAGACGAATGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLAVLLL*KTNGQV
Trigger: AACCTGGCCATTCGTCTTCAAGAGCAACAACACGGC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCTGTCCAAAGCCGTGTaGTTGCTCTTGAAGACGAAT +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLLSKAV*LLLKTN
Trigger: ATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAG...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGAGTCTGAGGGTCTGTaGAGCTTCTTGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLESEGL*SFLSEL
Trigger: CAGCTCAGACAAGAAGCTCAACAGACCCTCAGACTC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 90 bp CAGACGGGGGCTCTGGTGGGTTCTGAGGTCACAGAGGTCATCGCTTaGGGACTGTGTTTGTTGGCTTTCTCTGATGTGGTTTTTACCACC +
Preference number: 5 (lower is better)
Translates to: QTGALVGSEVTEVIA*GLCLLAFSDVVFTT
Trigger: GGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTGTGACCTCAGAACCCACCAGAGCCCCCGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 90 bp CCAGGTTGCCACAATAGCGGTACAGGTCTTCATGATCCTGTGCTGTaGGGTTCATTCGGGGCTCATCTGGTCGTGGGTAAATGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGCHNSGTGLHDPVL*GSFGAHLVVGKWGR
Trigger: TCTTCCCCATTTACCCACGACCAGATGAGCCCCGAATGAACCTCACAGCACAGGATCATGAAGACCTGTACCGCTATTGTGGCAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 90 bp AAGAGCCAGGTTGCCACAATAGCGGTACAGGTCTTCATGATCCTGTaGTGTGAGGTTCATTCGGGGCTCATCTGGTCGTGGGTAAATGGG +
Preference number: 5 (lower is better)
Translates to: KSQVATIAVQVFMIL*CEVHSGLIWSWVNG
Trigger: CCCATTTACCCACGACCAGATGAGCCCCGAATGAACCTCACAGCACAGGATCATGAAGACCTGTACCGCTATTGTGGCAACCTGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 90 bp GCAGCCTCTTCATATCCAGTTCGTTCAGCAGTAGCTTCTGCTTCATaGACACTGCCAGGTTCTCTTCCTCCGCCCTGCTCTGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: AASSYPVRSAVASAS*TLPGSLPPPCSALL
Trigger: TAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGCAGTGTCCATGAAGCAGAAGCTACTGCTGAACGAACTGGATATGAAGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCACTTGCAGCCCTaGCAAGTGTTTTCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLLHLQP*QVFSCQ
Trigger: TTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCGAGCCTTGCTGTTGTTaGGTGTCAAGAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLEPCCC*VSRSFL
Trigger: CAGAAAACTTCTTGACACCAAACAACAGCAAGGCTC...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTTCTCATCTAGGATCTaGGGGTTGATGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLFSSRI*GLMVGR
Trigger: TCTGCCCACCATCAACCCCAAGATCCTAGATGAGAA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGCCAGGAGGTTAAACTaGTCTGAAGTACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLARRLN*SEVPPR
Trigger: CCTTGGTGGTACTTCAGACAAGTTTAACCTCCTGGC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTAGAGTGAAGATAAATTaGTTCCTGGTGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGRVKIN*FLVKVR
Trigger: CCTCACCTTCACCAGGAACAAATTTATCTTCACTCT...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS TCA 90 bp GGTCACAGAGGTCATCGCTTGAGGACTGTGTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCACGTAGGGCCACGGTTCAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GHRGHRLRTVFVGFL*CGFYHHVGPRFRAI
Trigger: GATGGCTCTGAACCGTGGCCCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 90 bp TGTCGTAGGACACCAGCTCCTTCTTCCTCTTGTTGTCCATCACCTTaGGGATCAAATCTTCCCGTCCTGTGTCCTCTGCCTGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: CRRTPAPSSSCCPSP*GSNLPVLCPLPGSP
Trigger: TGGAGATCCAGGCAGAGGACACAGGACGGGAAGATTTGATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCTGGTGTCCTACGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 90 bp ATGATGATGGAGTTTGGTGGCTGTCCAAAGCCGTGTTGTTGCTCTTaGAGACGAATGGCCAGGTTTTGCTTCTCTCGTGCCCAGTGGCGA +
Preference number: 5 (lower is better)
Translates to: MMMEFGGCPKPCCCS*RRMARFCFSRAQWR
Trigger: TCGCCACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp AGCTCCTTCTCTCGGTCATTCTTCCGAATCAGCTCATTTTGCAGGTaGTGCACCCTGTCTCGCAGCCTCTTCATATCCAGTTCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSFSRSFFRISSFCR*CTLSRSLFISSSFS
Trigger: GCTGAACGAACTGGATATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCGAGAGAAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp CAGAGGTCATCGCTTGAGGACTGTGTTTGTTGGCTTTCTCTGATGTaGTTTTTACCACCACGTAGGGCCACGGTTCAGAGCCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: QRSSLEDCVCWLSLM*FLPPRRATVQSHPC
Trigger: GCAAGGATGGCTCTGAACCGTGGCCCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp GGGGCTGAAGTTCCTCCATTTCCTGAGTGGAGTCTAAGGAGCTCATaGACCAGGATTCACGGATGGCACCCAGATTCTCATCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: GAEVPPFPEWSLRSS*TRIHGWHPDSHLGS
Trigger: AGATCCTAGATGAGAATCTGGGTGCCATCCGTGAATCCTGGTCCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGGAACTTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGTCCTTCTTCCTCTTGTaGTCCATCACCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLSFFLL*SITLRI
Trigger: GATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGA...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGGGCAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLGRALL*FGVKKF
Trigger: AAACTTCTTGACACCAAACAACAGCAAGGCTCTGCC...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GTGCACTCATTGCTAGAACAGCAAGCTTCCTTTAAATGCCTGCTGCAGGGCATGGTCCCCATCATTGACTaGCAACTGCACCCCAGCACT +
Preference number: 5 (lower is better)
Translates to: VHSLLEQQASFKCLLQGMVPIID*QLHPST
Trigger: AGTGCTGGGGTGCAGTTGCAAGTCAATGATGGGGAC...CATGCCCTGCAGCAGGCATTTAAAGGAAGCTTGCTGTTCTAGCAATGAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCAGAGTGAAGATAAATTaGTTCCTGGTGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLRVKIN*FLVKVR
Trigger: CCTCACCTTCACCAGGAACAAATTTATCTTCACTCT...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp CGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCGGTTTCTTACAGAACCCTTaGGGCAGAGTGAAGATAAAT +
Preference number: 5 (lower is better)
Translates to: RLWGHVNPQHMAKEICSGFLQNP*GRVKIN
Trigger: ATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAA...ACCGGAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS TCA 90 bp CGAGCTGACTCCTCCAGCTGGTTTTCCAGGGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCCAGGAGGTTAAACTTGTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: RADSSSWFSRDKIRL*ACSSLARRLNLSEV
Trigger: TACTTCAGACAAGTTTAACCTCCTGGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTCCCTGGAAAACCAGCTGGAGGAGTCAGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp TCCTTCTCTCGGTCATTCTTCCGAATCAGCTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTCTTCATATCCAGTTCGTTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SFSRSFFRISSFCRC*TLSRSLFISSSFSS
Trigger: ACTGCTGAACGAACTGGATATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCGAGAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp TGGGTTCTGAGGTCACAGAGGTCATCGCTTGAGGACTGTGTTTGTTaGCTTTCTCTGATGTGGTTTTTACCACCACGTAGGGCCACGGTT +
Preference number: 5 (lower is better)
Translates to: WVLRSQRSSLEDCVC*LSLMWFLPPRRATV
Trigger: AACCGTGGCCCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTGTGACCTCAGAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp CGCTCCACTTGCAGCCCTTGCAAGTGTTTTCCTGTCAACATCTTGTaGTATAGACGAGATTTCAGTGGTAACACCGATACACCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RSTCSPCKCFPVNIL*YRRDFSGNTDTPRG
Trigger: GCCCCTGGGTGTATCGGTGTTACCACTGAAATCTCGTCTATACCACAAGATGTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp CTTGGATGCTCCAGCATTAGGCTGGTCTATGATGATGGAGTTTGGTaGCTGTCCAAAGCCGTGTTGTTGCTCTTGAAGACGAATGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGCSSIRLVYDDGVW*LSKAVLLLLKTNGQ
Trigger: CTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATAGACCAGCCTAATGCTGGAGCATCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp AAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCTTCTTACAGAACCCTTaGGGCAGAGTGAAGATAAAT +
Preference number: 5 (lower is better)
Translates to: KASLGARESPAHGEGDLLFLQNP*GRVKIN
Trigger: ATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAA...GAGCAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGATATTGATTTTGGGTTaGTGTACAGCAGGGGCACCT +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLILILG*CTAGAP
Trigger: AGGTGCCCCTGCTGTACACAAACCCAAAATCAATAT...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS GCA 90 bp GATGGTATTGGTTCCTTCCTCTCACAGAGCCTTTCTTCCAATATCTaGTCCATCTTCTCGATCACCTTCTCCTGGTGCCGTACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: DGIGSFLSQSLSSNI*SIFSITFSWCRTVS
Trigger: GGACACTGTACGGCACCAGGAGAAGGTGATCGAGAAGATGGAGCAGATATTGGAAGAAAGGCTCTGTGAGAGGAAGGAACCAATACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp GATCCATCCAGCCTCAGAGCCTCCACACGCAGATGTGCATCACTCTaGCCATCATTCTTACAGAACCCTTTGGGCAGAGTGAAGATAAAT +
Preference number: 5 (lower is better)
Translates to: DPSSLRASTRRCASL*PSFLQNPLGRVKIN
Trigger: ATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAATGATGGGCAGAGTGATGCACATCTGCGTGTGGAGGCTCTGAGGCTGGATGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp TTAAAGGCGTCTTTGGGGGCACGTGAATCCCCAGCACATGGCGAAGGAGATCTGCTCCAAATATTGATTTaGGGTTTGTGTACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LKASLGARESPAHGEGDLLQILI*GLCTAG
Trigger: CCCTGCTGTACACAAACCCAAAATCAATATTTGGAG...CAGATCTCCTTCGCCATGTGCTGGGGATTCACGTGCCCCCAAAGACGCCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS TCA 90 bp AGGATTCACGGATGGCACCCAGATTCTCATCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGCTGTTGTTTGGTGTCAAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: RIHGWHPDSHLGSWG*WWAEPCCCLVSRSF
Trigger: AAAACTTCTTGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAGATGAGAATCTGGGTGCCATCCGTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 90 bp ATTCTTGGATGCTCCAGCATTAGGCTGGTCTATGATGATGGAGTTTaGTGGCTGTCCAAAGCCGTGTTGTTGCTCTTGAAGACGAATGGC +
Preference number: 5 (lower is better)
Translates to: ILGCSSIRLVYDDGV*WLSKAVLLLLKTNG
Trigger: GCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATAGACCAGCCTAATGCTGGAGCATCCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 90 bp TTTAGGTTGGTGTCGATGATGGGAAGCCGCTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAACATCTTGTGGTATAGACGAGATTTC +
Preference number: 5 (lower is better)
Translates to: FRLVSMMGSRSTCSP*KCFPVNILWYRRDF
Trigger: GAAATCTCGTCTATACCACAAGATGTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCCCATCATCGACACCAACCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS GCA 90 bp AAGTTTTCTGGTCTGATGATGGGAAGCCGCTCCACTTGCAGCCCTTaGAAGTGTTTTCCTGTCAACATCTTGTGGTATAGACGAGATTTC +
Preference number: 5 (lower is better)
Translates to: KFSGLMMGSRSTCSP*KCFPVNILWYRRDF
Trigger: GAAATCTCGTCTATACCACAAGATGTTGACAGGAAAACACTTGCAAGGGCTGCAAGTGGAGCGGCTTCCCATCATCAGACCAGAAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS-3UTR CAA 90 bp GCTTCCTTTAAATGCCTGCTGCAGGGCATGCTGGACTGTATACCACTCAGATCTTTCTTACAGAACCCTTaGGGCAGAGTGAAGATAAAT +
Preference number: 5 (lower is better)
Translates to: ASFKCLLQGMLDCIPLRSFLQNP*GRVKIN
Trigger: ATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAA...AGATCTGAGTGGTATACAGTCCAGCATGCCCTGCAGCAGGCATTTAAAGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS-3UTR CAA 90 bp TATACCACTCAGATCTTCCCAGCAACAGTGGACATGGGAGTTGTTCTCATCCATAGAGTGAAGATAAATTaGTTCCTGGTGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: YTTQIFPATVDMGVVLIHRVKIN*FLVKVR
Trigger: CCTCACCTTCACCAGGAACAAATTTATCTTCACTCT...ATGGATGAGAACAACTCCCATGTCCACTGTTGCTGGGAAGATCTGAGTGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS CCA 72 bp CCACACTGTAAGCCAGGCCCCCACAGTGGCGGGCTGTaGGGTCCTCGCTGGCTCGGAGAAGAGCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: PHCKPGPHSGGL*GPRWLGEEPGC
Trigger: GCAACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAGCCCGCCACTGTGGGGGCCTGGCTTACAGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp GCTCCCAACTCCCTGGGATCCACCGGTAGGGCCTGCTaGTGCAGAATGATGGGGGCTGACTGCTGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: APNSLGSTGRAC*CRMMGADCWRF
Trigger: GAACCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACCGGTGGATCCCAGGGAGTTGGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp CAACAGCTCTGCCTGAGCCGGATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTCCTGGTCACTGTCAGT +
Preference number: 6 (lower is better)
Translates to: QQLCLSRMLPGS*FPAEPLLVTVS
Trigger: ACTGACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS GCA 72 bp TTCCTCAGGAACCTGAGCCGGATGCTGCCAGGGTCCTaGTTCCCAGCTGAGCCCCTCCTGGTCACTGTCAGT +
Preference number: 6 (lower is better)
Translates to: FLRNLSRMLPGS*FPAEPLLVTVS
Trigger: ACTGACAGTGACCAGGAGGGGCTCAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGTTCCTGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 72 bp GGGACACCCACCTGTGCTGGCAGGGTCTCTGTGGACTaGGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: GTPTCAGRVSVD*GWPGPFVSCSL
Trigger: AAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGTGGGTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS TCA 72 bp CCCAGCACTGGAGCCTGCCTGCAGTGGGTTTTCAGCTaGCAGCCTCAGGGCGTACCGGCCCTCCTCATTAAA +
Preference number: 6 (lower is better)
Translates to: PSTGACLQWVFS*QPQGVPALLIK
Trigger: TTTAATGAGGAGGGCCGGTACGCCCTGAGGCTGTCAGCTGAAAACCCACTGCAGGCAGGCTCCAGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp GGTAGGGCCTGCTGCTGCAGAATGATGGGGGCTGACTaGTGGCGGTTCTTTTCCAGCTCTGTCCGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: GRACCCRMMGAD*WRFFSSSVRSL
Trigger: GAGGCTTCGGACAGAGCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp AGGGCCTGCTGCTGCAGAATGATGGGGGCTGACTGCTaGCGGTTCTTTTCCAGCTCTGTCCGAAGCCTCGTG +
Preference number: 6 (lower is better)
Translates to: RACCCRMMGADC*RFFSSSVRSLV
Trigger: CACGAGGCTTCGGACAGAGCTGGAAAAGAACCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp GCTTCATGGACACTGCCAGGTTCTCTTCCTCCGCCCTaGTCTGCTCTTCTATGCTCTGCTGGCTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: ASWTLPGSLPPP*SALLCSAGSGG
Trigger: GCCACCTGAGCCAGCAGAGCATAGAAGAGCAGAGCAGGGCGGAGGAAGAGAACCTGGCAGTGTCCATGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp TCTGAAGTACCACCAAGGAAGTCCGGTAGGGCCTGCTaGTGCAGAATGATGGGGGCTGACTGCTGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SEVPPRKSGRAC*CRMMGADCWRF
Trigger: GAACCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACCGGACTTCCTTGGTGGTACTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS GCA 72 bp TTGTCTGAAGTACCACCAAGGAAGTCCGGTAGGGCCTaGTGCTGCAGAATGATGGGGGCTGACTGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LSEVPPRKSGRA*CCRMMGADCWR
Trigger: CCGCCAGCAGTCAGCCCCCATCATTCTGCAGCAGCAGGCCCTACCGGACTTCCTTGGTGGTACTTCAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS CCA 72 bp AAGTCCTGTGCTGGCAGGGTCTCTGTGGACTTGGGGTaGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: KSCAGRVSVDLG*PGPFVSCSLSA
Trigger: GGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS TCA 72 bp GCCAGGATCCTGCTGCTCAATGACCTCAGTGACAGCTaGGCAGGCTGGAAGGGGGTCCCCATCATTGACTTG +
Preference number: 6 (lower is better)
Translates to: ARILLLNDLSDS*AGWKGVPIIDL
Trigger: CAAGTCAATGATGGGGACCCCCTTCCAGCCTGCTCAGCTGTCACTGAGGTCATTGAGCAGCAGGATCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp CTTCTCTCCAGCCTTCAGTCGCTGGCTCAGCAGGGATaGAGGGAGGTAGGGATCAGGACCTCTAAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: LLSSLQSLAQQG*REVGIRTSKGH
Trigger: ATGGCCTTTAGAGGTCCTGATCCCTACCTCCCTGCATCCCTGCTGAGCCAGCGACTGAAGGCTGGAGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp CTGTGGGGTCCTCGCTGGCTCGGAGAAGAGCCAGGTTaGCACAATAGCGGTACAGGTCTTCATGATCCTGTG +
Preference number: 6 (lower is better)
Translates to: LWGPRWLGEEPG*HNSGTGLHDPV
Trigger: CACAGGATCATGAAGACCTGTACCGCTATTGTGGCAACCTGGCTCTTCTCCGAGCCAGCGAGGACCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp CGTAGCGGGGAAGTAAGCTGCCCTTCCGAACCACGGTaGCATACAGGCAGGTCTTGGCAGCAGCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: RSGEVSCPSEPR*HTGRSWQQLHL
Trigger: AAGATGAAGCTGCTGCCAAGACCTGCCTGTATGCCACCGTGGTTCGGAAGGGCAGCTTACTTCCCCGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS CCA 72 bp AGACGAATGGCCAGGTTTTGCTTCTCTCGTGCCCAGTaGCGAGCTGACTCCTCCAGCTGGTTTTCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: RRMARFCFSRAQ*RADSSSWFSRD
Trigger: GTCCCTGGAAAACCAGCTGGAGGAGTCAGCTCGCCACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp TACCACCAAGGAAGTCCTGTGCTGGCAGGGTCTCTGTaGACTTGGGGTGGCCCGGGCCATTTGTGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: YHQGSPVLAGSL*TWGGPGHLCLV
Trigger: TACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS CAA 72 bp GCAGGGTCTCTGTGGACTTGGGGTGGCCCGGGCCATTaGTGTCTTGTAGCCTTTCTGCCAAATCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: AGSLWTWGGPGH*CLVAFLPNLHL
Trigger: CAGGTGGAGATTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 90 bp GAAGTACCACCAAGGAAGTCCTGTGCTGGCAGGGTCTCTGTGGACTaGGGGTGGCCCGGGCCATTTGTGTCTTGTAGCCTTTCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: EVPPRKSCAGRVSVD*GWPGPFVSCSLSAK
Trigger: TTTGGCAGAAAGGCTACAAGACACAAATGGCCCGGGCCACCCCAAGTCCACAGAGACCCTGCCAGCACAGGACTTCCTTGGTGGTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215944.2
CDS TCA 72 bp CTCGAAGTCTGTAGCTCTGGTTGGCTGGGTTCCAGTTaGCAGTCTGAGACAGAGGACCTAGGGTCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: LEVCSSGWLGSS*QSETEDLGSLC
Trigger: GCACAGGGACCCTAGGTCCTCTGTCTCAGACTGTCAACTGGAACCCAGCCAACCAGAGCTACAGACTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS TCA 72 bp TTCCAGTTCAAAGTTTCCCTCTTCAACAGCTCTGCCTaGGCCGGATGCTGCCAGGGTCCTGCTTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: FQFKVSLFNSSA*AGCCQGPASQL
Trigger: CAGCTGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTGAAGAGGGAAACTTTGAACTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS GCA 72 bp GTTCTCCTCCTCCAGGATGTTAGCCTGCTTCTTCAGTaGCAGGATGTCCTCTGCCATCTTCTGCATGGCCCG +
Preference number: 6 (lower is better)
Translates to: VLLLQDVSLLLQ*QDVLCHLLHGP
Trigger: CGGGCCATGCAGAAGATGGCAGAGGACATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGAGGAGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp AGGATATGGGTCCTGGGAGGTATCCAGGCGGCCCTGTaGTTCCTCAGGAACCTTTGTCTTCTGTCGTCCCAT +
Preference number: 6 (lower is better)
Translates to: RIWVLGGIQAAL*FLRNLCLLSSH
Trigger: ATGGGACGACAGAAGACAAAGGTTCCTGAGGAACCACAGGGCCGCCTGGATACCTCCCAGGACCCATATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS CCA 72 bp GTGTTCTCTGAGAAACTGGTGGCCCCATCTCGGGCTTaGAAGAGGAAGGACTGGTTCCACAAGGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: VFSEKLVAPSRA*KRKDWFHKGCS
Trigger: AGAGCAGCCCTTGTGGAACCAGTCCTTCCTCTTCCAAGCCCGAGATGGGGCCACCAGTTTCTCAGAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp GCTCTGTCCGAAGCCTCGTGTTTTCTGCTAGCAGCATaGAGTAAAGGTCAACAGCCAGGGTCTCTCCCACGG +
Preference number: 6 (lower is better)
Translates to: ALSEASCFLLAA*SKGQQPGSLPR
Trigger: CCGTGGGAGAGACCCTGGCTGTTGACCTTTACTCCATGCTGCTAGCAGAAAACACGAGGCTTCGGACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp CTCAGCATGCCGTTCTCCTCCTCCAGGATGTTAGCCTaGTTCTTCAGTGCCAGGATGTCCTCTGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: LSMPFSSSRMLA*FFSARMSSAIF
Trigger: GAAGATGGCAGAGGACATCCTGGCACTGAAGAAGCAGGCTAACATCCTGGAGGAGGAGAACGGCATGCTGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp GGATTTCCAGTTCAAAGTTTCCCTCTTCAACAGCTCTaGCTGAGCCGGATGCTGCCAGGGTCCTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GFPVQSFPLQQL*LSRMLPGSCFP
Trigger: TGGGAAGCAGGACCCTGGCAGCATCCGGCTCAGGCAGAGCTGTTGAAGAGGGAAACTTTGAACTGGAAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098681.4
CDS CCA 72 bp CGAGATTTCAGTGGTAACACCGATACACCCAGGGGCTaGTTGAGGGCCCATGGCTCACTGCTTTGCATTGAG +
Preference number: 6 (lower is better)
Translates to: RDFSGNTDTPRG*LRAHGSLLCIE
Trigger: CTCAATGCAAAGCAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGTATCGGTGTTACCACTGAAATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp TCTTCAGTGCCAGGATGTCCTCTGCCATCTTCTGCATaGCCCGCCGGTAATTGTTCATCTCCACATCACGGG +
Preference number: 6 (lower is better)
Translates to: SSVPGCPLPSSA*PAGNCSSPHHG
Trigger: CCCGTGATGTGGAGATGAACAATTACCGGCGGGCCATGCAGAAGATGGCAGAGGACATCCTGGCACTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp GCTGTCCAAAGCCGTGTTGTTGCTCTTGAAGACGAATaGCCAGGTTTTGCTTCTCTCGTGCCCAGTGGCGAG +
Preference number: 6 (lower is better)
Translates to: AVQSRVVALEDE*PGFASLVPSGE
Trigger: CTCGCCACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp GGCCACGGTTCAGAGCCATCCTTGCCGGCAGGAAGGTaGGTAGCTCCATATAGAGTGACAGTGATAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GHGSEPSLPAGR*VAPYRVTVIVS
Trigger: GGAGACTATCACTGTCACTCTATATGGAGCTACCAACCTTCCTGCCGGCAAGGATGGCTCTGAACCGTGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp GATTTCAGTGGTAACACCGATACACCCAGGGGCTGGTaGAGGGCCCATGGCTCACTGCTTTGCATTGAGGCA +
Preference number: 6 (lower is better)
Translates to: DFSGNTDTPRGW*RAHGSLLCIEA
Trigger: TGCCTCAATGCAAAGCAGTGAGCCATGGGCCCTCAACCAGCCCCTGGGTGTATCGGTGTTACCACTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp AAGGAGAGGTTCACCGAGGGGGCTTCTCCATTGATGGTTTTTAGGTaGGTGTCGATGATGGGAAGCCGCTCCACTTGCAGCCCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: KERFTEGASPLMVFR*VSMMGSRSTCSPCK
Trigger: CTTGCAAGGGCTGCAAGTGGAGCGGCTTCCCATCATCGACACCAACCTAAAAACCATCAATGGAGAAGCCCCCTCGGTGAACCTCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS TCA 72 bp CCCCAGGCTTGGACAGCTGAGGATACCCGTTCTGGTTaGTCCGAGGCACATCAAAGTTCATTGGCGATGAGA +
Preference number: 6 (lower is better)
Translates to: PQAWTAEDTRSG*SEAHQSSLAMR
Trigger: TCTCATCGCCAATGAACTTTGATGTGCCTCGGATCAACCAGAACGGGTATCCTCAGCTGTCCAAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp GTTGCCACAATAGCGGTACAGGTCTTCATGATCCTGTaGTGTGAGGTTCATTCGGGGCTCATCTGGTCGTGG +
Preference number: 6 (lower is better)
Translates to: VATIAVQVFMIL*CEVHSGLIWSW
Trigger: CCACGACCAGATGAGCCCCGAATGAACCTCACAGCACAGGATCATGAAGACCTGTACCGCTATTGTGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp CCACATCACGGGGCTGAAGTTCCTCCATTTCCTGAGTaGAGTCTAAGGAGCTCATGGACCAGGATTCACGGA +
Preference number: 6 (lower is better)
Translates to: PHHGAEVPPFPE*SLRSSWTRIHG
Trigger: TCCGTGAATCCTGGTCCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGGAACTTCAGCCCCGTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp ATGATCCTGTGCTGTGAGGTTCATTCGGGGCTCATCTaGTCGTGGGTAAATGGGGAAGATGGCCTCACCTAC +
Preference number: 6 (lower is better)
Translates to: MILCCEVHSGLI*SWVNGEDGLTY
Trigger: GTAGGTGAGGCCATCTTCCCCATTTACCCACGACCAGATGAGCCCCGAATGAACCTCACAGCACAGGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 72 bp CTCATGCCACCAGAGCTCCAAATATTGATTTTGGGTTaGTGTACAGCAGGGGCACCTGGAGCAGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LMPPELQILILG*CTAGAPGAAWA
Trigger: TGCCCAGGCTGCTCCAGGTGCCCCTGCTGTACACAAACCCAAAATCAATATTTGGAGCTCTGGTGGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CAA 90 bp GAGCTGGGCAGGGAGGTTTCCAGTTTCGAGAGCTGCTGGCGATTCTaGGATGCTCCAGCATTAGGCTGGTCTATGATGATGGAGTTTGGT +
Preference number: 6 (lower is better)
Translates to: ELGREVSSFESCWRF*DAPALGWSMMMEFG
Trigger: ACCAAACTCCATCATCATAGACCAGCCTAATGCTGGAGCATCCAAGAATCGCCAGCAGCTCTCGAAACTGGAAACCTCCCTGCCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp AGGAAGTCCTGTGTTCTCATGCCACCAGAGCTCCAAATATTGATTTaGGGTTTGTGTACAGCAGGGGCACCTGGAGCAGCCTGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RKSCVLMPPELQILI*GLCTAGAPGAAWAV
Trigger: CACTGCCCAGGCTGCTCCAGGTGCCCCTGCTGTACACAAACCCAAAATCAATATTTGGAGCTCTGGTGGCATGAGAACACAGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CAA 90 bp CCACCAAGGAAGTCCTGTGTTCTCATGCCACCAGAGCTCCAAATATaGATTTTGGGTTTGTGTACAGCAGGGGCACCTGGAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PPRKSCVLMPPELQI*ILGLCTAGAPGAAW
Trigger: CCAGGCTGCTCCAGGTGCCCCTGCTGTACACAAACCCAAAATCAATATTTGGAGCTCTGGTGGCATGAGAACACAGGACTTCCTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS TCA 72 bp GGATGGCACCCAGATTCTCATCTAGGATCTTGGGGTTaGTGGTGGGCAGAGCCTTGCTGTTGTTTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: GWHPDSHLGSWG*WWAEPCCCLVS
Trigger: TGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAGATCCTAGATGAGAATCTGGGTGCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp CGGTCATTCTTCCGAATCAGCTCATTTTGCAGGTGCTaGACCCTGTCTCGCAGCCTCTTCATATCCAGTTCG +
Preference number: 6 (lower is better)
Translates to: RSFFRISSFCRC*TLSRSLFISSS
Trigger: CGAACTGGATATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp GGATCCATCCAGCCTCAGAGCCTCCACACGCAGATGTaGATCACTCTGCCCATCATTCTTACAGAACCCTTT +
Preference number: 6 (lower is better)
Translates to: GSIQPQSLHTQM*ITLPIILTEPF
Trigger: AAAGGGTTCTGTAAGAATGATGGGCAGAGTGATGCACATCTGCGTGTGGAGGCTCTGAGGCTGGATGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp TCCAATATCTGCTCCATCTTCTCGATCACCTTCTCCTaGTGCCGTACAGTGTCCTCCAGGGCCTTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SNICSIFSITFS*CRTVSSRAFIF
Trigger: GAAGATGAAGGCCCTGGAGGACACTGTACGGCACCAGGAGAAGGTGATCGAGAAGATGGAGCAGATATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp GACACCAGCTCCTTCTTCCTCTTGTTGTCCATCACCTaGAGGATCAAATCTTCCCGTCCTGTGTCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: DTSSFFLLLSIT*RIKSSRPVSSA
Trigger: GGCAGAGGACACAGGACGGGAAGATTTGATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp ACTACCCGAGCAATTACCACCATGGGCTTGAGGCTGTaGACTAAGGGCTCGTTGACTCCTCGAAGAAAGACC +
Preference number: 6 (lower is better)
Translates to: TTRAITTMGLRL*TKGSLTPRRKT
Trigger: GGTCTTTCTTCGAGGAGTCAACGAGCCCTTAGTCAACAGCCTCAAGCCCATGGTGGTAATTGCTCGGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp CTCCTTCTCTCGGTCATTCTTCCGAATCAGCTCATTTaGCAGGTGCTGCACCCTGTCTCGCAGCCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: LLLSVILPNQLI*QVLHPVSQPLH
Trigger: ATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCGAGAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp TATGATGATGGAGTTTGGTGGCTGTCCAAAGCCGTGTTGTTGCTCTaGAAGACGAATGGCCAGGTTTTGCTTCTCTCGTGCCCAGTGGCG +
Preference number: 6 (lower is better)
Translates to: YDDGVWWLSKAVLLL*KTNGQVLLLSCPVA
Trigger: CGCCACTGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp CTGGTCTATGATGATGGAGTTTGGTGGCTGTCCAAAGCCGTGTTGTaGCTCTTGAAGACGAATGGCCAGGTTTTGCTTCTCTCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: LVYDDGVWWLSKAVL*LLKTNGQVLLLSCP
Trigger: TGGGCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp AGGCTGGTCTATGATGATGGAGTTTGGTGGCTGTCCAAAGCCGTGTaGTTGCTCTTGAAGACGAATGGCCAGGTTTTGCTTCTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: RLVYDDGVWWLSKAV*LLLKTNGQVLLLSC
Trigger: GCACGAGAGAAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATAGACCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 72 bp GGTCATCGCTTGAGGACTGTGTTTGTTGGCTTTCTCTaGTGTGGTTTTTACCACCACGTAGGGCCACGGTTC +
Preference number: 6 (lower is better)
Translates to: GHRLRTVFVGFL*CGFYHHVGPRF
Trigger: GAACCGTGGCCCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 72 bp GCTCTGGTGGGTTCTGAGGTCACAGAGGTCATCGCTTaGGGACTGTGTTTGTTGGCTTTCTCTGATGTGGTT +
Preference number: 6 (lower is better)
Translates to: ALVGSEVTEVIA*GLCLLAFSDVV
Trigger: AACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTGTGACCTCAGAACCCACCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 72 bp ACACCAGCTCCTTCTTCCTCTTGTTGTCCATCACCTTaGGGATCAAATCTTCCCGTCCTGTGTCCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: TPAPSSSCCPSP*GSNLPVLCPLP
Trigger: AGGCAGAGGACACAGGACGGGAAGATTTGATCCTCAAGGTGATGGACAACAAGAGGAAGAAGGAGCTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS TCA 72 bp TCCTCCAGCTGGTTTTCCAGGGACAAGATCCGACTCTaGGCTTGTTCTAGCTTGGCCAGGAGGTTAAACTTG +
Preference number: 6 (lower is better)
Translates to: SSSWFSRDKIRL*ACSSLARRLNL
Trigger: CAAGTTTAACCTCCTGGCCAAGCTAGAACAAGCTCAGAGTCGGATCTTGTCCCTGGAAAACCAGCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp TCTCGGTCATTCTTCCGAATCAGCTCATTTTGCAGGTaGTGCACCCTGTCTCGCAGCCTCTTCATATCCAGT +
Preference number: 6 (lower is better)
Translates to: SRSFFRISSFCR*CTLSRSLFISS
Trigger: ACTGGATATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS GCA 72 bp TCCTTCTCTCGGTCATTCTTCCGAATCAGCTCATTTTaGAGGTGCTGCACCCTGTCTCGCAGCCTCTTCATA +
Preference number: 6 (lower is better)
Translates to: SFSRSFFRISSF*RCCTLSRSLFI
Trigger: TATGAAGAGGCTGCGAGACAGGGTGCAGCACCTGCAAAATGAGCTGATTCGGAAGAATGACCGAGAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp TCGCTTGAGGACTGTGTTTGTTGGCTTTCTCTGATGTaGTTTTTACCACCACGTAGGGCCACGGTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: SLEDCVCWLSLM*FLPPRRATVQS
Trigger: GCTCTGAACCGTGGCCCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp GTTCCTCCATTTCCTGAGTGGAGTCTAAGGAGCTCATaGACCAGGATTCACGGATGGCACCCAGATTCTCAT +
Preference number: 6 (lower is better)
Translates to: VPPFPEWSLRSS*TRIHGWHPDSH
Trigger: ATGAGAATCTGGGTGCCATCCGTGAATCCTGGTCCATGAGCTCCTTAGACTCCACTCAGGAAATGGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 90 bp TGCCCATCATTCTTACAGAACCCTTTGGGCAGAGTGAAGATAAATTaGTTCCTGGTGAAGGTGAGGCTCTGGCCAGGATCCTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: CPSFLQNPLGRVKIN*FLVKVRLWPGSCCS
Trigger: TGAGCAGCAGGATCCTGGCCAGAGCCTCACCTTCACCAGGAACAAATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAATGATGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS GCA 72 bp GGTTTCCAGTTTCGAGAGCTGCTGGCGATTCTTGGATaGTCCAGCATTAGGCTGGTCTATGATGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: GFQFRELLAILG*SSIRLVYDDGV
Trigger: AACTCCATCATCATAGACCAGCCTAATGCTGGAGCATCCAAGAATCGCCAGCAGCTCTCGAAACTGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp CTTGGGGTTGATGGTGGGCAGAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGGTCTCTCAGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: LGVDGGQSLAVV*CQEVFWSLRGK
Trigger: CTTTCCTCTGAGAGACCAGAAAACTTCTTGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS CCA 72 bp TCCAGCATTAGGCTGGTCTATGATGATGGAGTTTGGTaGCTGTCCAAAGCCGTGTTGTTGCTCTTGAAGACG +
Preference number: 6 (lower is better)
Translates to: SSIRLVYDDGVW*LSKAVLLLLKT
Trigger: CGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATAGACCAGCCTAATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CCA 72 bp CCAGCTGAGCCCCTCCTGGTCACTGTCAGTGCTGAATaGGCTCATATAAGATTCTTCTATCTTGTCACTCAG +
Preference number: 6 (lower is better)
Translates to: PAEPLLVTVSAE*AHIRFFYLVTQ
Trigger: CTGAGTGACAAGATAGAAGAATCTTATATGAGCCCATTCAGCACTGACAGTGACCAGGAGGGGCTCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp CTTGGGGTTGATGGTGGGCAGAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGGTCTGATGATGGGAAG +
Preference number: 6 (lower is better)
Translates to: LGVDGGQSLAVV*CQEVFWSDDGK
Trigger: CTTCCCATCATCAGACCAGAAAACTTCTTGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 72 bp AGGATCTTGGGGTTGATGGTGGGCAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTTTCTGGTCTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: RILGLMVGRALL*FGVKKFSGLSE
Trigger: CTCTGAGAGACCAGAAAACTTCTTGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042205.13
ENSMUST00000119665.2
CDS CCA 72 bp AGGTCACAGAGGTCATCGCTTGAGGACTGTGTTTGTTaGCTTTCTCTGATGTGGTTTTTACCACCACGTAGG +
Preference number: 6 (lower is better)
Translates to: RSQRSSLEDCVC*LSLMWFLPPRR
Trigger: CCTACGTGGTGGTAAAAACCACATCAGAGAAAGCCAACAAACACAGTCCTCAAGCGATGACCTCTGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp AGGATCTTGGGGTTGATGGTGGGCAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTTTCTGGTCTGATGATG +
Preference number: 6 (lower is better)
Translates to: RILGLMVGRALL*FGVKKFSGLMM
Trigger: CATCATCAGACCAGAAAACTTCTTGACACCAAACAACAGCAAGGCTCTGCCCACCATCAACCCCAAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 72 bp AAGTCCTGTGTTCTCATGCCACCAGAGCTCCAAATATaGATTTTGGGTTTGTGTACAGCAGGGGCACCTGGA +
Preference number: 6 (lower is better)
Translates to: KSCVLMPPELQI*ILGLCTAGAPG
Trigger: TCCAGGTGCCCCTGCTGTACACAAACCCAAAATCAATATTTGGAGCTCTGGTGGCATGAGAACACAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098682.10
CDS CAA 90 bp CGAGCAATTACCACCATGGGCTTGAGGCTGTTGACTAAGGGCTCGTaGACTCCTCGAAGAAAGACCTTTTCTAACTTAAATTGGTATGGG +
Preference number: 6 (lower is better)
Translates to: RAITTMGLRLLTKGS*TPRRKTFSNLNWYG
Trigger: CCCATACCAATTTAAGTTAGAAAAGGTCTTTCTTCGAGGAGTCAACGAGCCCTTAGTCAACAGCCTCAAGCCCATGGTGGTAATTGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CAA 72 bp TATGATGATGGAGTTTGGTGGCTGTCCAAAGCCGTGTaGTTGCTCTTGAAGACGAATGGCCAGGTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: YDDGVWWLSKAV*LLLKTNGQVLL
Trigger: AAGCAAAACCTGGCCATTCGTCTTCAAGAGCAACAACACGGCTTTGGACAGCCACCAAACTCCATCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp ACCACCATGGGCTTGAGGCTGTTGACTAAGGGCTCGTaGACTCCTCGAAGAAAGACCTTTTCTAACTTAAAT +
Preference number: 6 (lower is better)
Translates to: TTMGLRLLTKGS*TPRRKTFSNLN
Trigger: ATTTAAGTTAGAAAAGGTCTTTCTTCGAGGAGTCAACGAGCCCTTAGTCAACAGCCTCAAGCCCATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp TGCAGCCCTTGCAAGTGTTTTCCTGTCAACATCTTGTaGTATAGACGAGATTTCAGTGGTAACACCGATACA +
Preference number: 6 (lower is better)
Translates to: CSPCKCFPVNIL*YRRDFSGNTDT
Trigger: TGTATCGGTGTTACCACTGAAATCTCGTCTATACCACAAGATGTTGACAGGAAAACACTTGCAAGGGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp ACTTGCAGCCCTTGCAAGTGTTTTCCTGTCAACATCTaGTGGTATAGACGAGATTTCAGTGGTAACACCGAT +
Preference number: 6 (lower is better)
Translates to: TCSPCKCFPVNI*WYRRDFSGNTD
Trigger: ATCGGTGTTACCACTGAAATCTCGTCTATACCACAAGATGTTGACAGGAAAACACTTGCAAGGGCTGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042205.13
ENSMUST00000098682.10
ENSMUST00000119665.2
ENSMUST00000215944.2
CDS CAA 72 bp TGTGCATCACTCTGCCCATCATTCTTACAGAACCCTTaGGGCAGAGTGAAGATAAATTTGTTCCTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: CASLCPSFLQNP*GRVKINLFLVK
Trigger: CTTCACCAGGAACAAATTTATCTTCACTCTGCCCAAAGGGTTCTGTAAGAATGATGGGCAGAGTGATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098681.4
ENSMUST00000098682.10
ENSMUST00000215944.2
CDS CCA 72 bp TTGACTCCTCGAAGAAAGACCTTTTCTAACTTAAATTaGTATGGGTGGAAGATGCGCAGGTATTTAATGGGG +
Preference number: 6 (lower is better)
Translates to: LTPRRKTFSNLN*YGWKMRRYLMG
Trigger: CCCCATTAAATACCTGCGCATCTTCCACCCATACCAATTTAAGTTAGAAAAGGTCTTTCTTCGAGGAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098682.10
ENSMUST00000215944.2