Pregenerated sensors for CCDC28A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059554Ensembl transcript IDs: ENSMUST00000052648.9, ENSMUST00000080860.13, ENSMUST00000173243.8, ENSMUST00000173962.2, ENSMUST00000174592.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAAGCTGGGCCACCACAGGACACCTGTGCGCCACAAAGGCACTaGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCG | + |
|
Preference number: 1 (lower is better) Translates to: TEAGPPQDTCAPQRH*VSVVAARTDPSAPP Trigger: CGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGTCCTGTGGTGGCCCAGCTTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 90 bp | GGCCACCACAGGACACCTGTGCGCCACAAAGGCACTGGGTCAGCGTaGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGC | + |
|
Preference number: 1 (lower is better) Translates to: GHHRTPVRHKGTGSA*WRQGQILQPHRRFS Trigger: GCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGTCCTGTGGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 90 bp | CACCACAGGACACCTGTGCGCCACAAAGGCACTGGGTCAGCGTGGTaGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACA | + |
|
Preference number: 1 (lower is better) Translates to: HHRTPVRHKGTGSAW*RQGQILQPHRRFST Trigger: TGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGTCCTGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR TCA 90 bp | TGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTaGCGTAAACAGAAGCTGGGCCACCACAGGACACCTGTGCGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: CHWPLGNTPACVPIV*RKQKLGHHRTPVRH Trigger: GTGGCGCACAGGTGTCCTGTGGTGGCCCAGCTTCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR GCA 90 bp | TGTGCTTTGCCCAAATGTAAGCATGTGCAGCACATGTGTGCCTGGTaGCCTCAGAGGCAAGAAGAAGGCTTCAGATCCCCGGAACTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: CALPKCKHVQHMCAW*PQRQEEGFRSPELK Trigger: CTTCAGTTCCGGGGATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACATGCTTACATTTGGGCAAAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CCA 90 bp | ATGTGTGCTTTGCCCAAATGTAAGCATGTGCAGCACATGTGTGCCTaGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCCCCGGAACTG | + |
|
Preference number: 1 (lower is better) Translates to: MCALPKCKHVQHMCA*CPQRQEEGFRSPEL Trigger: CAGTTCCGGGGATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACATGCTTACATTTGGGCAAAGCACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR TCA 90 bp | AATTACCTTCCACAGACCCATCGCCTGTTGCCACCACCCTCAGAGTaGGGACTTGAAAGTACAAGTTCTAGAAGGATACAGATATCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: NYLPQTHRLLPPPSE*GLESTSSRRIQISR Trigger: TCTGGATATCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCAACAGGCGATGGGTCTGTGGAAGGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR GCA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTaGAAACACTTTTACCTCCTAAGCCATCTTGCTGGACCTATGCCT | + |
|
Preference number: 1 (lower is better) Translates to: SHVSCIQVEISPALP*KHFYLLSHLAGPMP Trigger: AGGCATAGGTCCAGCAAGATGGCTTAGGAGGTAAAAGTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CCA 90 bp | ATAGCAAATCTCACAAGTACTTATTCAACATTTGTCACTGGCCATTaGGAAACACACCTGCGTGTGTACCGATTGTCTGACGTAAACAGA | + |
|
Preference number: 1 (lower is better) Translates to: IANLTSTYSTFVTGH*ETHLRVYRLSDVNR Trigger: TCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTTGTGAGATTTGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CAA 90 bp | TGCACGCGCATTCGCATGACTCGGAGTTTGCGGTGGAAGATGATTTaGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCGCT | + |
|
Preference number: 2 (lower is better) Translates to: CTRIRMTRSLRWKMI*LLDSAGKERRLRIA Trigger: AGCGATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAACTCCGAGTCATGCGAATGCGCGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCGCTACTGGACTCAGCTaGGAAGGAACGGAGGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: WKMILLLDSAGKERRLRIATGLS*EGTEAA Trigger: CGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGC...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTGACGTAAACAGAGCGCCACAAAGGCACTaGGTCAGCGTGGTGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TGHWETHLRVYRLSDVNRAPQRH*VSVVAA Trigger: TGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGC...TCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CAA 90 bp | GCGCGTGAGCAGGATCACTGCACGCGCATTCGCATGACTCGGAGTTaGCGGTGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AREQDHCTRIRMTRS*RWKMILLLDSAGKE Trigger: TTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAACTCCGAGTCATGCGAATGCGCGTGCAGTGATCCTGCTCACGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR CCA 90 bp | GTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGCGCCACAAAGGCACTaGGTCAGCGTGGTGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLIQHLSLAIGKHTCVCTAPQRH*VSVVAA Trigger: TGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGC...GGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CAA 90 bp | ACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATaGTCTGACGTAAACAGAAGCTGGGCCACCACAGGACACCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFVTGHWETHLRVYR*SDVNRSWATTGHLC Trigger: GCACAGGTGTCCTGTGGTGGCCCAGCTTCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR CCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATCAGCACATGTGTGCCTaGTGCCCTCAGAGGCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YTQVLGSELRPSHWCSKNQHMCA*CPQRQE Trigger: TTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTG...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR GCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATCACATGTGTGCCTGGTaGCCTCAGAGGCAAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YTQVLGSELRPSHWCSKNHMCAW*PQRQEE Trigger: TTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTG...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGGCTACTGGACTCAGCTaGGAAGGAACGGAGGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: YSTFVTGHWETHLRVYRLATGLS*EGTEAA Trigger: CGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGC...CAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCGTTTGCGGTGGAAGATaGTTTTGCTACTGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: WKMILLLDSAGKERRLRIVCGGR*FCYWTQ Trigger: CTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAAC...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGATGTGCAGCACATGTGTaGCTGGTGCCCTCAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRCAAHV*LVPSEA Trigger: TGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCTGTGCGTCTGCCAAGTaGAGTTTCTGTGGTAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: WKMILLLDSAGKERRLRICASAK*SFCGRN Trigger: ATTCCTACCACAGAAACTGCACTTGGCAGACGCACA...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173962.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAGCACAAAGCATTTCAAGTATAACCCTTAAGGCAACAGAAGCAAGCACAGCTACTGGACTCAGCTaGGAAGGAACGGAGGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: GLAQSISSITLKATEASTATGLS*EGTEAA Trigger: CGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGC...TGTGCTTGCTTCTGTTGCCTTAAGGGTTATACTTGAAATGCTTTGTGCTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGTCTCTTTTCTGGGTATGTGTGCTTTaGCCAAATGTAAGCATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TAPCTVSSQNGNRGVSLFWVCVL*PNVSMC Trigger: GCACATGCTTACATTTGGGCAAAGCACACATACCCA...GAAAAGAGACACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACCACTTTACACACAGGTaGTGGGATCTGAACTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SHVSCIQVEISPALPCKHHFTHR*WDLNSG Trigger: GCCTGAGTTCAGATCCCAGCACCTGTGTGTAAAGTG...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGATCATATAGCCCAGGCTaGCCTTTTAGAGTGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRSYSPG*PFRVWA Trigger: TGCCCACACTCTAAAAGGCCAGCCTGGGCTATATGA...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTACTCGGAGTTTGCGGTaGAAGATGATTTTGCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: GKDRSFSPTEGLAQSISSTRSLR*KMILLL Trigger: CAGTAGCAAAATCATCTTCCACCGCAAACTCCGAGT...ACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTGACTCGGAGTTTGCGGTaGAAGATGATTTTGCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: QHLSLAIGKHTCVCTDCLTRSLR*KMILLL Trigger: CAGTAGCAAAATCATCTTCCACCGCAAACTCCGAGT...CAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CAA 90 bp | AGTCACGGTCGGGTGTCCTCCTTAACTGTTCTCTACCTCATTTCTTaGAGACAGGATCTCTCACCAAACCTGAAGCTCACAATATCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SHGRVSSLTVLYLIS*RQDLSPNLKLTISA Trigger: TGCTGATATTGTGAGCTTCAGGTTTGGTGAGAGATCCTGTCTCAAAGAAATGAGGTAGAGAACAGTTAAGGAGGACACCCGACCGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGTCTCTTTTCATCTCTCACCAAACCTaGAGCTCACAATATCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TAPCTVSSQNGNRGVSLFISHQT*SSQYQQ Trigger: TTGCTGATATTGTGAGCTTCAGGTTTGGTGAGAGAT...GAAAAGAGACACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATGTTTGCGGTGGAAGATaGTTTTGCTACTGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LIQHLSLAIGKHTCVCTDVCGGR*FCYWTQ Trigger: CTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAAC...ATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTTTGCGGTGGAAGATaGTTTTGCTACTGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LFNICHWPLGNTPACVPIVCGGR*FCYWTQ Trigger: CTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAAC...AATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR GCA 72 bp | GACGTAAACAGAAGCTGGGCCACCACAGGACACCTGTaGGCCACAAAGGCACTGGGTCAGCGTGGTGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: DVNRSWATTGHL*ATKALGQRGGG Trigger: GCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGTCCTGTGGTGGCCCAGCTTCTGTTTACGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 72 bp | ACACCTGTGCGCCACAAAGGCACTGGGTCAGCGTGGTaGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPVRHKGTGSAW*RQGQILQPHRR Trigger: CCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 72 bp | AGGACACCTGTGCGCCACAAAGGCACTGGGTCAGCGTaGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: RTPVRHKGTGSA*WRQGQILQPHR Trigger: TCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTTTGTGGCGCACAGGTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR TCA 72 bp | GTGGATTACAGCGAGCACGTGGACGAAAGCGGCGCGTaGGCAGGATCACTGCACGCGCATTCGCATGACTCG | + |
|
Preference number: 3 (lower is better) Translates to: VDYSEHVDESGA*AGSLHAHSHDS Trigger: CGAGTCATGCGAATGCGCGTGCAGTGATCCTGCTCACGCGCCGCTTTCGTCCACGTGCTCGCTGTAATCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 72 bp | CTGCGTGTGTACCGATTGTCTGACGTAAACAGAAGCTaGGCCACCACAGGACACCTGTGCGCCACAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRVYRLSDVNRS*ATTGHLCATKA Trigger: TGCCTTTGTGGCGCACAGGTGTCCTGTGGTGGCCCAGCTTCTGTTTACGTCAGACAATCGGTACACACGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR GCA 72 bp | CCCAAATGTAAGCATGTGCAGCACATGTGTGCCTGGTaGCCTCAGAGGCAAGAAGAAGGCTTCAGATCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PKCKHVQHMCAW*PQRQEEGFRSP Trigger: CGGGGATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACATGCTTACATTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR TCA 72 bp | CCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTaGCGTAAACAGAAGCTGGGCCACCACAGGACACCT | + |
|
Preference number: 3 (lower is better) Translates to: PLGNTPACVPIV*RKQKLGHHRTP Trigger: AGGTGTCCTGTGGTGGCCCAGCTTCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CCA 72 bp | TTTGCGGTGGAAGATGATTTTGCTACTGGACTCAGCTaGGAAGGAACGGAGGCTGCGGATCGCTTTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FAVEDDFATGLS*EGTEAADRFSC Trigger: GCAGCTAAAGCGATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173962.2 |
||
| 3UTR CCA 72 bp | TTGCCCAAATGTAAGCATGTGCAGCACATGTGTGCCTaGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LPKCKHVQHMCA*CPQRQEEGFRS Trigger: GGATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACATGCTTACATTTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR GCA 72 bp | AGGGCAGCCTGTAATCCTCAGAGATCTCCTTGTCTCTaGTCCTCGAGTGCTGAGATCATAGGCACTTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: RAACNPQRSPCL*SSSAEIIGTLH Trigger: GTGTAAAGTGCCTATGATCTCAGCACTCGAGGAGCAGAGACAAGGAGATCTCTGAGGATTACAGGCTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR GCA 72 bp | CCTGACCTAATTACCTTCCACAGACCCATCGCCTGTTaGCACCACCCTCAGAGTGAGGACTTGAAAGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PDLITFHRPIAC*HHPQSEDLKVQ Trigger: TTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCAACAGGCGATGGGTCTGTGGAAGGTAATTAGGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGCTCTACCTCATTTCTTaGAGACAGGATCTCTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVLYLIS*RQDLSP Trigger: TGGTGAGAGATCCTGTCTCAAAGAAATGAGGTAGAG...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGCCTCAGAGTGAGGACTaGAAAGTACAAGTTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVPQSED*KVQVLE Trigger: TTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGG...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGAATGGGTATGTGTGCTTaGCCCAAATGTAAGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRMGMCA*PKCKHV Trigger: CACATGCTTACATTTGGGCAAAGCACACATACCCAT...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGATACCAAGTACTAGCCTaGCACTATACCTCCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRYQVLA*HYTSWF Trigger: AAACCAGGAGGTATAGTGCAAGGCTAGTACTTGGTA...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CCA 72 bp | CTCACAAGTACTTATTCAACATTTGTCACTGGCCATTaGGAAACACACCTGCGTGTGTACCGATTGTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTSTYSTFVTGH*ETHLRVYRLSD Trigger: GTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR GCA 72 bp | AGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTaGAAACACTTTTACCTCCTAAGCCATCTTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCIQVEISPALP*KHFYLLSHLAG Trigger: TCCAGCAAGATGGCTTAGGAGGTAAAAGTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CCA 72 bp | AGCAAATCTCACAAGTACTTATTCAACATTTGTCACTaGCCATTGGGAAACACACCTGCGTGTGTACCGATT | + |
|
Preference number: 3 (lower is better) Translates to: SKSHKYLFNICH*PLGNTPACVPI Trigger: AATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTTGTGAGATTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGGAAGGAGTGCTGGATaGGTGTGGACTGGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGQRGGGKDRSFSPTEGLGRSAG*VWTGPP Trigger: AGGGGGCCCAGTCCACACCCATCCAGCACTCCTTCC...TAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTCATCCGAGACGTCGGTaGGGAAGGAGTGCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSAWWRQGQILQPHRRFHPRRR*GRSAGW Trigger: CCATCCAGCACTCCTTCCTCACCGACGTCTCGGATG...AAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTTGGATGGGTGTGGACTaGGCCCCCTTCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSAWWRQGQILQPHRRFWMGVD*APFPSP Trigger: AGGAGAAGGGAAGGGGGCCCAGTCCACACCCATCCA...AAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTGTGAGGAAGGAGTGCTaGATGGGTGTGGACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSAWWRQGQILQPHRRFVRKEC*MGVDWA Trigger: GGCCCAGTCCACACCCATCCAGCACTCCTTCCTCAC...AAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTATCGGTGAGGAAGGAGTaGTGGATGGGTGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQRGGGKDRSFSPTEGLSVRKE*WMGVDW Trigger: CCAGTCCACACCCATCCAGCACTCCTTCCTCACCGA...TAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGCACATGTGTGCCTGGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCCATCCGAGACGTCGGTaGGGAAGGAGTGCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAAHVCLVPSEARRRLQIHPRRR*GRSAGW Trigger: CCATCCAGCACTCCTTCCTCACCGACGTCTCGGATG...GATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCCATCCGAGACGTCGGTaGGGAAGGAGTGCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WKMILLLDSAGKERRLRIHPRRR*GRSAGW Trigger: CCATCCAGCACTCCTTCCTCACCGACGTCTCGGATG...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGTCTCTGCTCCTCGAGTGCTGAGATCATAGGCACTTTACACACAGGTGCTGTGAGGAAGGAGTGCTaGATGGGTGTGGACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCLCSSSAEIIGTLHTGAVRKEC*MGVDWA Trigger: GGCCCAGTCCACACCCATCCAGCACTCCTTCCTCAC...AGCACCTGTGTGTAAAGTGCCTATGATCTCAGCACTCGAGGAGCAGAGACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGTCTCTGCTCCTCGAGTGCTGAGATCATAGGCACTTTACACACAGGTGCTTCGGTGAGGAAGGAGTaGTGGATGGGTGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLCSSSAEIIGTLHTGASVRKE*WMGVDW Trigger: CCAGTCCACACCCATCCAGCACTCCTTCCTCACCGA...AGCACCTGTGTGTAAAGTGCCTATGATCTCAGCACTCGAGGAGCAGAGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCACATGTGTGCCTGGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCCGAGCTAATTTCTCCTaGATTCCCCGGACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CAAHVCLVPSEARRRLQIRANFS*IPRTCS Trigger: GGAGCATGTCCGGGGAATGCAGGAGAAATTAGCTCG...GATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCAAGCCTGTCCAGGTTTaGGTCACTGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WKMILLLDSAGKERRLRIKPVQV*VTGCFP Trigger: CGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTT...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATGGGCCGCCATGTGGGTaGTGGAAACAGAATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTQVLGSELRPSHWCSKNGPPCG*WKQNLG Trigger: ACCCAGATTCTGTTTCCAGCACCCACATGGCGGCCC...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGTATAACCCTTAAGGCAACAGAAGCAAGCACAGCAGCACACCTCTGTACCGGAAGGAGTGCTGGATaGGTGTGGACTGGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSITLKATEASTAAHLCTGRSAG*VWTGPP Trigger: AGGGGGCCCAGTCCACACCCATCCAGCACTCCTTCC...GGTACAGAGGTGTGCTGCTGTGCTTGCTTCTGTTGCCTTAAGGGTTATACTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTGACGTGAGGAAGGAGTGCTaGATGGGTGTGGACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFVTGHWETHLRVYRLSDVRKEC*MGVDWA Trigger: GGCCCAGTCCACACCCATCCAGCACTCCTTCCTCAC...GTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| 3UTR CAA 72 bp | ACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATaGTCTGACGTAAACAGAAGCTGGGCCACCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHWETHLRVYR*SDVNRSWATTG Trigger: TCCTGTGGTGGCCCAGCTTCTGTTTACGTCAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTTCGGTGAGGAAGGAGTaGTGGATGGGTGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDRSFSPTEGLAQSISSSVRKE*WMGVDW Trigger: CCAGTCCACACCCATCCAGCACTCCTTCCTCACCGA...ACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCGTTTGCGTCACTGGCTaGTTTCCGCTTATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKMILLLDSAGKERRLRIVCVTG*FPLILR Trigger: CCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAAC...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATAAGCCTGTCCAGGTTTaGGTCACTGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YTQVLGSELRPSHWCSKNKPVQV*VTGCFP Trigger: CGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTT...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACGGAAGGAGTGCTGGATaGGTGTGGACTGGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHVSCIQVEISPALPCKHGRSAG*VWTGPP Trigger: AGGGGGCCCAGTCCACACCCATCCAGCACTCCTTCC...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATTCGAGGGCCGCCATGTaGGTGCTGGAAACAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: YTQVLGSELRPSHWCSKNSRAAM*VLETES Trigger: AGATTCTGTTTCCAGCACCCACATGGCGGCCCTCGA...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CAA 72 bp | CAGGATCACTGCACGCGCATTCGCATGACTCGGAGTTaGCGGTGGAAGATGATTTTGCTACTGGACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDHCTRIRMTRS*RWKMILLLDSA Trigger: AGCTGAGTCCAGTAGCAAAATCATCTTCCACCGCAAACTCCGAGTCATGCGAATGCGCGTGCAGTGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGCACATGTGTGCCTGGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCTTTAACTTTGGCCTCTaGGAAGCTGACTGCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAAHVCLVPSEARRRLQIFNFGL*EADCDV Trigger: CACATCGCAGTCAGCTTCTCAGAGGCCAAAGTTAAA...GATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGTGCATTCCCCGGACATaGTCCATCTGCTCTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVCIPRT*SICSME Trigger: TTCCATAGAGCAGATGGAGCATGTCCGGGGAATGCA...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATGTTTGCGTCACTGGCTaGTTTCCGCTTATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTQVLGSELRPSHWCSKNVCVTG*FPLILR Trigger: CCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAAC...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACTGGATGGGTGTGGACTaGGCCCCCTTCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHVSCIQVEISPALPCKHWMGVD*APFPSP Trigger: AGGAGAAGGGAAGGGGGCCCAGTCCACACCCATCCA...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | GTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCTGGATGGGTGTGGACTaGGCCCCCTTCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLIQHLSLAIGKHTCVCTWMGVD*APFPSP Trigger: AGGAGAAGGGAAGGGGGCCCAGTCCACACCCATCCA...GGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGAAGTGCTGGATGGGTGTaGACTGGGCCCCCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRSAGWV*TGPPSL Trigger: AAGGGAAGGGGGCCCAGTCCACACCCATCCAGCACT...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | CAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGTCTGCGAGCTAATTTCTCCTaGATTCCCCGGACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLSLAIGKHTCVCTDCLRANFS*IPRTCS Trigger: GGAGCATGTCCGGGGAATGCAGGAGAAATTAGCTCG...CAGACAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTATAACCCTTAAGAGTGCTGGATGGGTGTaGACTGGGCCCCCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSPTEGLAQSISSITLKSAGWV*TGPPSL Trigger: AAGGGAAGGGGGCCCAGTCCACACCCATCCAGCACT...CTTAAGGGTTATACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTATAACAAGCCTGTCCAGGTTTaGGTCACTGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQILQPHRRFSTKHFKYNKPVQV*VTGCFP Trigger: CGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTT...GTTATACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGAGAATCTGGGTCTTCTaGAAGAGCGGCAAGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVRIWVF*KSGKYF Trigger: AAAGTACTTGCCGCTCTTGCAGAAGACCCAGATTCT...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR TCA 90 bp | TACACACAGGTGCTGGGATCTGAACTCAGGCCCTCACACTGGTGTAGCAAGAATCTGCGATGTGGGATTTaGAAACCCTGTGCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: YTQVLGSELRPSHWCSKNLRCGI*KPCAFT Trigger: AGTAAAAGCACAGGGTTTTCAAATCCCACATCGCAG...ATTCTTGCTACACCAGTGTGAGGGCCTGAGTTCAGATCCCAGCACCTGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGCGGACATGCTCCATCTaGTCTATGGAACATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVRTCSI*SMEHSF Trigger: AAATGAATGTTCCATAGAGCAGATGGAGCATGTCCG...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTATAACCCTTAAGGCAACAGAAGCAAGCACAGCAGCACACCTCTGTACCTGCATTCCCCGGACATaGTCCATCTGCTCTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSITLKATEASTAAHLCTCIPRT*SICSME Trigger: TTCCATAGAGCAGATGGAGCATGTCCGGGGAATGCA...GGTACAGAGGTGTGCTGCTGTGCTTGCTTCTGTTGCCTTAAGGGTTATACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | CTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATGTTTGCGTCACTGGCTaGTTTCCGCTTATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIQHLSLAIGKHTCVCTDVCVTG*FPLILR Trigger: CCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAAC...ATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGTTTAGCACAAAGCATTTCAAGTATAACCCTTAAGGCAACAGAAGCAAGCAGTGCTGGATGGGTGTaGACTGGGCCCCCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGLAQSISSITLKATEASSAGWV*TGPPSL Trigger: AAGGGAAGGGGGCCCAGTCCACACCCATCCAGCACT...GCTTGCTTCTGTTGCCTTAAGGGTTATACTTGAAATGCTTTGTGCTAAACCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACGCTGGAAACAGAATCTaGGTCTTCTGCAAGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHVSCIQVEISPALPCKHAGNRI*VFCKSG Trigger: GCCGCTCTTGCAGAAGACCCAGATTCTGTTTCCAGC...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| 3UTR CAA 72 bp | CCCATCGCCTGTTGCCACCACCCTCAGAGTGAGGACTaGAAAGTACAAGTTCTAGAAGGATACAGATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIACCHHPQSED*KVQVLEGYRYP Trigger: TGGATATCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCAACAGGCGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGTCTCTTTTCTTGGCATTAACAACCTaGGTAGAGTGGGCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAPCTVSSQNGNRGVSLFLALTT*VEWALK Trigger: TTTCAGTGCCCACTCTACTCAGGTTGTTAATGCCAA...GAAAAGAGACACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR GCA 90 bp | GTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCTGCATTCCCCGGACATaGTCCATCTGCTCTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLIQHLSLAIGKHTCVCTCIPRT*SICSME Trigger: TTCCATAGAGCAGATGGAGCATGTCCGGGGAATGCA...GGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTAAAGCCTGTCCAGGTTTaGGTCACTGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KYLFNICHWPLGNTPACVKPVQV*VTGCFP Trigger: CGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTT...TACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACGAGCTAATTTCTCCTaGATTCCCCGGACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYLFNICHWPLGNTPACVRANFS*IPRTCS Trigger: GGAGCATGTCCGGGGAATGCAGGAGAAATTAGCTCG...TACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACCACCCTCAGAGTGAGGACTTGAAAGTACAAGTTCTAGAAGGATACAGAAAGCTGACTGCGATGTaGGATTTGAAAACCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHHPQSEDLKVQVLEGYRKLTAM*DLKTLC Trigger: GCACAGGGTTTTCAAATCCCACATCGCAGTCAGCTT...TCTGTATCCTTCTAGAACTTGTACTTTCAAGTCCTCACTCTGAGGGTGGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGAAGCTGACTGCGATGTaGGATTTGAAAACCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSTFVTGHWETHLRVYRLKLTAM*DLKTLC Trigger: GCACAGGGTTTTCAAATCCCACATCGCAGTCAGCTT...CAATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080860.13 |
||
| CDS-3UTR GCA 90 bp | TCAAGTATAACCCTTAAGGCAACAGAAGCAAGCACAGCAGCACACCTCTGTACCTGTGCGTCTGCCAAGTaGAGTTTCTGTATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSITLKATEASTAAHLCTCASAK*SFCIEE Trigger: TTCTTCTATACAGAAACTGCACTTGGCAGACGCACA...GGTACAGAGGTGTGCTGCTGTGCTTGCTTCTGTTGCCTTAAGGGTTATACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTCGGACATGCTCCATCTaGTCTATGGAACATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFNICHWPLGNTPACVPIRTCSI*SMEHSF Trigger: AAATGAATGTTCCATAGAGCAGATGGAGCATGTCCG...AATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTAGCACAAAGCATTTCAAGTATAACCCTTAAGGCAACAGAAGCAAGCACACTGCGATGTGGGATTTaGAAACCCTGTGCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: GLAQSISSITLKATEASTLRCGI*KPCAFT Trigger: AGTAAAAGCACAGGGTTTTCAAATCCCACATCGCAG...TGTGCTTGCTTCTGTTGCCTTAAGGGTTATACTTGAAATGCTTTGTGCTAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080860.13 |
||
| CDS-3UTR GCA 90 bp | AAGTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTATGTGCGTCTGCCAAGTaGAGTTTCTGTATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYLFNICHWPLGNTPACVCASAK*SFCIEE Trigger: TTCTTCTATACAGAAACTGCACTTGGCAGACGCACA...TACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTCACAAGTACTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTTTGGCATTAACAACCTaGGTAGAGTGGGCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSHKYLFNICHWPLGNTPLALTT*VEWALK Trigger: TTTCAGTGCCCACTCTACTCAGGTTGTTAATGCCAA...AGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAGTACTTGTGAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080860.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCACTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAAGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KALGQRGGGKDRSFSPTEEACPG*RHWLLS Trigger: GGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTC...TTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCACTGGGTCAGCGTGGTGGCGGCAAGGACAGATCCTTCAGCCCCACCGAATCTCCTCCGGGAGGTTaGTTCTTTTCTTTCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: KALGQRGGGKDRSFSPTESPPGG*FFSFIT Trigger: GGTGATGAAAGAAAAGAACAAACCTCCCGGAGGAGA...TTCGGTGGGGCTGAAGGATCTGTCCTTGCCGCCACCACGCTGACCCAGTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGATGATTTTGCTACTGGACTCAGCTGGGAAGGAACGGAGGCTGCGGATCGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKMILLLDSAGKERRLRIEACPG*RHWLLS Trigger: GGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTC...GATCCGCAGCCTCCGTTCCTTCCCAGCTGAGTCCAGTAGCAAAATCATCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| CDS CCA 90 bp | TGCTCTATGGAACATTCATTTCCAAACGCCTGCAGCTTTCCAGAGTaGAAATCGTTCAGCAGGCTGAGGAGGCCGCGCTCCATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSMEHSFPNACSFPE*KSFSRLRRPRSISW Trigger: CCAGGAGATGGAGCGCGGCCTCCTCAGCCTGCTGAACGATTTCCACTCTGGAAAGCTGCAGGCGTTTGGAAATGAATGTTCCATAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052648.9 ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCAGCACATGTGTGCCTGGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCTCTCCTCCGGGAGGTTaGTTCTTTTCTTTCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: CAAHVCLVPSEARRRLQISPPGG*FFSFIT Trigger: GGTGATGAAAGAAAAGAACAAACCTCCCGGAGGAGA...GATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS CCA 90 bp | TCAATTCTTCTAAGTCCGACAGAAGCCTGTCCAGGTTTGCGTCACTaGCTGCTTTCCGCTTATCCTCAGGAAGTTCCTCTAACTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SILLSPTEACPGLRH*LLSAYPQEVPLTPR Trigger: ACGGGGAGTTAGAGGAACTTCCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTCTGTCGGACTTAGAAGAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCAGCACATGTGTGCCTGGTGCCCTCAGAGGCAAGAAGAAGGCTTCAGATCACTGCGATGTGGGATTaGAAAACCCTGTGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CAAHVCLVPSEARRRLQITAMWD*KTLCFY Trigger: GTAAAAGCACAGGGTTTTCAAATCCCACATCGCAGT...GATCTGAAGCCTTCTTCTTGCCTCTGAGGGCACCAGGCACACATGTGCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHVSCIQVEISPALPCKHEACPG*RHWLLS Trigger: GGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTC...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CAA 90 bp | GCTCACAGAACAGCACCCTGTACTGTGTCCTCACAGAATGGAAACAGAGGGGTGTCACCCTTTTTAACTTaGGCCTCTGAGAAGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AHRTAPCTVSSQNGNRGVSPFLT*ASEKLT Trigger: AGTCAGCTTCTCAGAGGCCAAAGTTAAAAAGGGTGA...CACCCCTCTGTTTCCATTCTGTGAGGACACAGTACAGGGTGCTGTTCTGTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CAA 90 bp | TTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFNICHWPLGNTPACVPIEACPG*RHWLLS Trigger: GGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTC...AATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTTCTCCTCCGGGAGGTTaGTTCTTTTCTTTCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKDRSFSPTEGLAQSISSSPPGG*FFSFIT Trigger: GGTGATGAAAGAAAAGAACAAACCTCCCGGAGGAGA...ACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080860.13 ENSMUST00000174592.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTGAGCTGTATTCAGGTTGAAATTTCACCAGCCTTACCCTGCAAACACTGGGCACTGAAAGACTaGGGACTCTTCCTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHVSCIQVEISPALPCKHWALKD*GLFLFA Trigger: AGCAAAGAGGAAGAGTCCCAAGTCTTTCAGTGCCCA...GTGTTTGCAGGGTAAGGCTGGTGAAATTTCAACCTGAATACAGCTCACGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS-3UTR CAA 90 bp | CTTATTCAACATTTGTCACTGGCCATTGGGAAACACACCTGCGTGTGTACCGATTGGGCACTGAAAGACTaGGGACTCTTCCTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIQHLSLAIGKHTCVCTDWALKD*GLFLFA Trigger: AGCAAAGAGGAAGAGTCCCAAGTCTTTCAGTGCCCA...ATCGGTACACACGCAGGTGTGTTTCCCAATGGCCAGTGACAAATGTTGAATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080860.13 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGACAGATCCTTCAGCCCCACCGAAGGTTTAGCACAAAGCATTTCAAGTACTGCGATGTGGGATTaGAAAACCCTGTGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GKDRSFSPTEGLAQSISSTAMWD*KTLCFY Trigger: GTAAAAGCACAGGGTTTTCAAATCCCACATCGCAGT...ACTTGAAATGCTTTGTGCTAAACCTTCGGTGGGGCTGAAGGATCTGTCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080860.13 |
||
| CDS GCA 72 bp | ATCTCCTGGACATCCGAGACGTCGGTGAGGAAGGAGTaGTGGATGGGTGTGGACTGGGCCCCCTTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISWTSETSVRKE*WMGVDWAPFPS Trigger: AGAAGGGAAGGGGGCCCAGTCCACACCCATCCAGCACTCCTTCCTCACCGACGTCTCGGATGTCCAGGAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052648.9 ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000174592.8 |
||
| CDS GCA 72 bp | CTTTTCAGCCCCGTCCGACAGAAGCCTGTCCAGGTTTaGGTCACTGGCTGCTTTCCGCTTATCCTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFSPVRQKPVQV*VTGCFPLILRK Trigger: CTTCCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTCTGTCGGACGGGGCTGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS CAA 72 bp | GCTTTTCAGCCCCGTCCGACAGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCCGCTTATCCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AFQPRPTEACPG*RHWLLSAYPQE Trigger: TTCCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTCTGTCGGACGGGGCTGAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS CAA 90 bp | GCTGAGTCAGCTTTTCAGCCCCGTCCGACAGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCCGCTTATCCTCAGGAAGTTCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: AESAFQPRPTEACPG*RHWLLSAYPQEVPL Trigger: TAGAGGAACTTCCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTCTGTCGGACGGGGCTGAAAAGCTGACTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052648.9 |
||
| CDS CCA 72 bp | GAACATTCATTTCCAAACGCCTGCAGCTTTCCAGAGTaGAAATCGTTCAGCAGGCTGAGGAGGCCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EHSFPNACSFPE*KSFSRLRRPRS Trigger: GGAGCGCGGCCTCCTCAGCCTGCTGAACGATTTCCACTCTGGAAAGCTGCAGGCGTTTGGAAATGAATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052648.9 ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000174592.8 |
||
| CDS CAA 72 bp | TCAATTCTTCTAAGTCCGACAGAAGCCTGTCCAGGTTaGCGTCACTGGCTGCTTTCCGCTTATCCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SILLSPTEACPG*RHWLLSAYPQE Trigger: TTCCTGAGGATAAGCGGAAAGCAGCCAGTGACGCAAACCTGGACAGGCTTCTGTCGGACTTAGAAGAATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000173962.2 ENSMUST00000174592.8 |
||
| CDS GCA 72 bp | CTGGACGCATTGGGGACGTCCTGTGCGTCTGCCAAGTaGAGTTTCTGTATAGAAGAATTCAATTCTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LDALGTSCASAK*SFCIEEFNSSK Trigger: CTTAGAAGAATTGAATTCTTCTATACAGAAACTGCACTTGGCAGACGCACAGGACGTCCCCAATGCGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080860.13 ENSMUST00000173243.8 ENSMUST00000174592.8 |
||