Pregenerated sensors for CCDC27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039492Ensembl transcript IDs: ENSMUST00000047207.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATTATCTATCACAGAACTAGCCACATAGACTGGCTTTaGCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGT | + |
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Preference number: 3 (lower is better) Translates to: IIYHRTSHIDWL*QQGPGLSWACC Trigger: ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATAGATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| 3UTR CCA 72 bp | GGTTTAATTATCTATCACAGAACTAGCCACATAGACTaGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GLIIYHRTSHID*LCQQGPGLSWA Trigger: TGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATAGATAATTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTTCCTCTGGGACTTCTTaGCCACAGTGGGGCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCSSGTS*PQWGCR Trigger: CCGGCAGCCCCACTGTGGTCAAGAAGTCCCAGAGGA...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTCCATCAGGCCCTTGCTaGTCTTGGGGGATGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCPSGPC*SWGMWS Trigger: GCTCCACATCCCCCAAGATCAGCAAGGGCCTGATGG...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGTGGCAGAGCCCAGCCTaGCTAGGGGATGGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWWQSPA*LGDGPQ Trigger: CTGAGGACCATCCCCTAGGCAGGCTGGGCTCTGCCA...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGCATACCTGGCCTGGGTaGCCTCCAGGACCACACGAG | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWHTWPG*PPGPHE Trigger: CTCGTGTGGTCCTGGAGGCCACCCAGGCCAGGTATG...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCGGCAGCCGCCTGGCTTaGCTTTTTGAGGCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACGSRLA*LFEALL Trigger: CAGCAAAGCCTCAAAAAGTCAAGCCAGGCGGCTGCC...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTTCATACTCCTCCAGCTaGGCCATCAGCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCSYSSS*AISSSS Trigger: TGAGGAGGAGCTGATGGCTCAGCTGGAGGAGTATGA...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCCCACGTGCAGCTCCTTaGTACTCTCCGCCATGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACPRAAP*YSPPCY Trigger: ATAGCATGGCGGAGAGTAGCAAGGAGCTGCACGTGG...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCCTGCTCAGTTTaGCAGCTGCAGCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSWACSV*QLQPPR Trigger: CCGAGGAGGCTGCAGCTGCCAAACTGAGCAGGCCCA...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCGTCTCAGTCTTGCTCTaGCTGGGCCTGCTCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACVSVLL*LGLLSL Trigger: CAAACTGAGCAGGCCCAGCCAGAGCAAGACTGAGAC...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTTAGCTTCTCATACCTaGCCTGGGTGGCCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACLASHT*PGWPPG Trigger: TCCTGGAGGCCACCCAGGCCAGGTATGAGAAGCTAA...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCAGCAGGTTCTTCAGCTaGTTCTTCAGGGCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACSRFFS*FFRASF Trigger: GAAGGAGGCCCTGAAGAAGCAGCTGAAGAACCTGCT...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCCCGAAGCTCCCACGATaGCTCTTCCTCATTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACPKLPR*LFLIHQ Trigger: TTGGTGAATGAGGAAGAGGCATCGTGGGAGCTTCGG...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCGTCTGTAGGTCGTCATaGAAATCCTTCCACCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACVCRSS*KSFHRL Trigger: GAGGCGGTGGAAGGATTTGCATGACGACCTACAGAC...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCAGGACCGGTCCATCTTaGTGGAAGCTGAAGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACRTGPS*WKLKRF Trigger: AAACCTCTTCAGCTTCCATCAAGATGGACCGGTCCT...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | AGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCACTCACTCCTCTTCCGTaGGTAGTTGAGCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSHIDWLCQQGPGLSWALTPLP*VVELTS Trigger: GCTTGTGAGCTCAACTACCCACGGAAGAGGAGTGAG...TGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTTGCGGTTTCTTCTCTaGGTCCTGTGTGTCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSLRFLL*VLCVAA Trigger: GGCTGCGACACACAGGACTCAGAGAAGAAACCGCAA...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGATGGCAGAACCCACATaGGACATGGATGTTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWMAEPT*DMDVVL Trigger: CAGGACAACATCCATGTCTCATGTGGGTTCTGCCAT...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTCTTCTCATGGATGACTaGGATATACCAGGGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCLLMDD*DIPGRS Trigger: AGAACGCCCTGGTATATCTCAGTCATCCATGAGAAG...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | AGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCAAGTCCCATTATCTCCTaGTGCTTCTTTTCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RTSHIDWLCQQGPGLSWASPIIS*CFFSSR Trigger: CCGGGAGGAAAAGAAGCATCAGGAGATAATGGGACT...TGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGCTACTCTCCGCCATaGTATATTCCTCCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACCYSPP*YIPPAS Trigger: AGATGCAGGAGGAATATAGCATGGCGGAGAGTAGCA...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCATCCATCTTCAAGTCTaGAACTTGCTGTCGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACIHLQV*NLLSED Trigger: GTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGAT...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTTCCAGAGCAGGTCCTTaGAAGATCAACCATAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCSRAGP*KINHNG Trigger: GCCATTATGGTTGATCTTCCAAGGACCTGCTCTGGA...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGAGCACTCTTGCTGAATaGAAAGACCCTCCCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWSTLAE*KDPPIH Trigger: GTGGATGGGAGGGTCTTTCCATTCAGCAAGAGTGCT...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCGGCGTTCTGGTCCTCTaGGACTTCTTGACCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSGVLVL*DFLTTV Trigger: CACTGTGGTCAAGAAGTCCCAGAGGACCAGAACGCC...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | ATCTATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCCAGTCTTGCTCTGGCTaGGCCTGCTCAGTTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IYHRTSHIDWLCQQGPGLQSCSG*ACSVWQ Trigger: CTGCCAAACTGAGCAGGCCCAGCCAGAGCAAGACTG...GAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTTGTCGGTGTTAACCTaGTCTTCCAGCTCTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACLSVLT*SSSSLV Trigger: AACCAAAGAGCTGGAAGATCAGGTTAACACCGACAA...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGCTTTGCTGGGTACTTTaGGGTTTCTTCTCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWLCWVL*GFFSES Trigger: GGACTCAGAGAAGAAACCGCAAAGTACCCAGCAAAG...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGTATTCCTCCTGCATCTaGATCCAGTGCTGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWYSSCI*IQCCSS Trigger: TGAGCTACAGCACTGGATGCAGATGCAGGAGGAATA...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | ATCTATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGGGAGACATCTGACTaGTGTAGTGGGGGCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: IYHRTSHIDWLCQQGPGLRETSD*CSGGTF Trigger: GAAGGTGCCCCCACTACAGCAGTCAGATGTCTCCCT...GAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCATCTCGGAGAAACGCTaGAGCTCTTCTCCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSISEKR*SSSPIR Trigger: CCTGATGGGAGAAGAGCTCCAGCGTTTCTCCGAGAT...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTGATCTTCCAGCTCTTTaGTTTGGGTGTTCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SHIDWLCQQGPGLSWACCDLPAL*FGCSAL Trigger: AAGAGCTGAACACCCAAACCAAAGAGCTGGAAGATC...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCCACAAGCACTCTTGCTaGATGGAAAGACCCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSHKHSC*MERPSH Trigger: ATGGGAGGGTCTTTCCATTCAGCAAGAGTGCTTGTG...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGATGCTATATTCCTCCTaGATCTGCATCCAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWMLYSS*ICIQCC Trigger: ACAGCACTGGATGCAGATGCAGGAGGAATATAGCAT...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCCTCCTCAGTTCCTTTTaGTTCATCACCCTCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSLLSSF*FITLHL Trigger: GAGGTGGAGGGTGATGAAGCAAAAGGAACTGAGGAG...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGAATTCCAGCTCTCTCTaGAAGTCCATCAACATCCGT | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWNSSSL*KSINIR Trigger: ACGGATGTTGATGGACTTCCAGAGAGAGCTGGAATT...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCACACTGAAGACAGCCTaGATGATCTTATTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: TSHIDWLCQQGPGLSWACTLKTA*MILFLS Trigger: GCTAAGGAATAAGATCATCCAGGCTGTCTTCAGTGT...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCCCTGGCTTGACTTTTTaGGGCTTTGCTGGGTACTTT | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSPGLTF*GFAGYF Trigger: AAAGTACCCAGCAAAGCCTCAAAAAGTCAAGCCAGG...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | ATCTATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCGATCCTTCTCATGGATaGCTGAGATATACCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IYHRTSHIDWLCQQGPGLDPSHG*LRYTRA Trigger: CGCCCTGGTATATCTCAGTCATCCATGAGAAGGATC...GAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR TCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCAGTGTCAGGATCTCCTaGTCTTTCTTCTGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSSVRIS*SFFCIW Trigger: CCAGATGCAGAAGAAAGATCAGGAGATCCTGACACT...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGCATCTGCATCCAGTaGTGTAGCTCATCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSCICIQ*CSSSSS Trigger: AGAAGAGGATGAGCTACAGCACTGGATGCAGATGCA...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR GCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCACCACACGAGTCTGTTaGTCTGTCTGTTGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSTTRVC*SVCWMI Trigger: GATCATCCAACAGACAGAGCAACAGACTCGTGTGGT...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTTTCCTCCCGGAGGTTaGAGAACTTGTCTGTCATGT | + |
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Preference number: 4 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSFPPGG*RTCLSC Trigger: ACATGACAGACAAGTTCTCCAACCTCCGGGAGGAAA...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS-3UTR CCA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGTCCAGCTCTTTGGTTTaGGTGTTCAGCTCTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWSSSLV*VFSSLI Trigger: TATTAAAGAGCTGAACACCCAAACCAAAGAGCTGGA...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS GCA 90 bp | CCTCCTCCTCCTCCTCGGGGCCCACCTCCAGCAGCGTCTCAGTCTTaGTCTGGCTGGGCCTGCTCAGTTTGGCAGCTGCAGCCTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: PPPPPRGPPPAASQS*SGWACSVWQLQPPR Trigger: CCGAGGAGGCTGCAGCTGCCAAACTGAGCAGGCCCAGCCAGAGCAAGACTGAGACGCTGCTGGAGGTGGGCCCCGAGGAGGAGGAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS GCA 90 bp | CCGGCAGCCGCCTGGCTTGACTTTTTGAGGCTTTGCTGGGTACTTTaGGGTTTCTTCTCTGAGTCCTGTGTGTCGCAGCCCCGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAAAWLDFLRLCWVL*GFFSESCVSQPRLA Trigger: AGCCAGCCGGGGCTGCGACACACAGGACTCAGAGAAGAAACCGCAAAGTACCCAGCAAAGCCTCAAAAAGTCAAGCCAGGCGGCTGCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 90 bp | ACCCTCCCATCCACACTGCTGGCAGAGCCCAGCCTGCCTAGGGGATaGTCCTCAGTCAACTTCCAAACTCCAGAGCAGGTCCTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLPSTLLAEPSLPRG*SSVNFQTPEQVLGR Trigger: TCTTCCAAGGACCTGCTCTGGAGTTTGGAAGTTGACTGAGGACCATCCCCTAGGCAGGCTGGGCTCTGCCAGCAGTGTGGATGGGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 90 bp | ACTCCTCTTCCGTGGGTAGTTGAGCTCACAAGCACTCTTGCTGAATaGAAAGACCCTCCCATCCACACTGCTGGCAGAGCCCAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLPWVVELTSTLAE*KDPPIHTAGRAQPA Trigger: GGCAGGCTGGGCTCTGCCAGCAGTGTGGATGGGAGGGTCTTTCCATTCAGCAAGAGTGCTTGTGAGCTCAACTACCCACGGAAGAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 90 bp | TCCTTCTCATGGATGACTGAGATATACCAGGGCGTTCTGGTCCTCTaGGACTTCTTGACCACAGTGGGGCTGCCGGTGGGACTCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFSWMTEIYQGVLVL*DFLTTVGLPVGLGS Trigger: AGACCCGAGTCCCACCGGCAGCCCCACTGTGGTCAAGAAGTCCCAGAGGACCAGAACGCCCTGGTATATCTCAGTCATCCATGAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 90 bp | CCATCAGCTCCTCCTCAAAGGACTCCGTCATGGAGTAGGACCTCTTaGGGTGACATTCCTCGTCCTCCCGAAGCTCCCACGATGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSAPPQRTPSWSRTS*GDIPRPPEAPTMPL Trigger: AAGAGGCATCGTGGGAGCTTCGGGAGGACGAGGAATGTCACCCCAAGAGGTCCTACTCCATGACGGAGTCCTTTGAGGAGGAGCTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCGTCCTCTGGGACTTCTaGACCACAGTGGGGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSVLWDF*TTVGLP Trigger: CGGCAGCCCCACTGTGGTCAAGAAGTCCCAGAGGAC...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 90 bp | TGGCGCTTCCTGGTTCCACGTGCAGCTCCTTGCTACTCTCCGCCATaGTATATTCCTCCTGCATCTGCATCCAGTGCTGTAGCTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: WRFLVPRAAPCYSPP*YIPPASASSAVAHP Trigger: AGGATGAGCTACAGCACTGGATGCAGATGCAGGAGGAATATAGCATGGCGGAGAGTAGCAAGGAGCTGCACGTGGAACCAGGAAGCGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCCCGCAGCTGAGACTCTaGGAAGTCAGTTTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSPQLRL*EVSLPL Trigger: CAGCGGCAAACTGACTTCCAAGAGTCTCAGCTGCGG...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCCACCTTCACGCCCTTTaGCTTCAGCTGACTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSHIDWLCQQGPGLSWACHLHAL*LQLTVE Trigger: TTCTACAGTCAGCTGAAGCAAAAGGGCGTGAAGGTG...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCGCCATCTTCTTGATCTaGCTAGGCAGGGAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSHIDWLCQQGPGLSWACAIFLI*LGRETS Trigger: AGATGTCTCCCTGCCTAGCAAGATCAAGAAGATGGC...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 90 bp | GGACCTCTTGGGGTGACATTCCTCGTCCTCCCGAAGCTCCCACGATaGCTCTTCCTCATTCACCAATATCTCTCCCTCCTCAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLGVTFLVLPKLPR*LFLIHQYLSLLSSF Trigger: AAAGGAACTGAGGAGGGAGAGATATTGGTGAATGAGGAAGAGGCATCGTGGGAGCTTCGGGAGGACGAGGAATGTCACCCCAAGAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGAGCTCACAAGCACTCTaGCTGAATGGAAAGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRTSHIDWLCQQGPGLSWSSQAL*LNGKTL Trigger: GAGGGTCTTTCCATTCAGCAAGAGTGCTTGTGAGCT...CCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATTTTCCTCCCGGAGGTaGGAGAACTTGTCTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RTSHIDWLCQQGPGLSWAFSSRR*ENLSVM Trigger: CATGACAGACAAGTTCTCCAACCTCCGGGAGGAAAA...TGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCCTGTTGCTCTGTCTGTaGGATGATCTCGTTACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSHIDWLCQQGPGLSWACLLLCL*DDLVTC Trigger: ACACGTAACGAGATCATCCAACAGACAGAGCAACAG...GCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | AGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCATGCTGTTCCATGGACAAGTTCTaGTTCCCACTGACACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHIDWLCQQGPGLSWACCSMDKF*FPLTLK Trigger: CTTCAGTGTCAGTGGGAACAAGAACTTGTCCATGGA...ACAGCATGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 90 bp | TGCTTCTTCAGGGCCTCCTTCTCCTTCTGGAGTGTCAGGATCTCCTaGTCTTTCTTCTGCATCTGGCTCTCCATCTCGGAGAAACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFFRASFSFWSVRIS*SFFCIWLSISEKRW Trigger: CCAGCGTTTCTCCGAGATGGAGAGCCAGATGCAGAAGAAAGATCAGGAGATCCTGACACTCCAGAAGGAGAAGGAGGCCCTGAAGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 90 bp | TGCCTCTTCCTCATTCACCAATATCTCTCCCTCCTCAGTTCCTTTTaGTTCATCACCCTCCACCTCCTCCTCTTCCTCCTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLFLIHQYLSLLSSF*FITLHLLLFLLLLL Trigger: GAGGAGGAGGAGGAGGAAGAGGAGGAGGTGGAGGGTGATGAAGCAAAAGGAACTGAGGAGGGAGAGATATTGGTGAATGAGGAAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 90 bp | CCTGCATCTGCATCCAGTGCTGTAGCTCATCCTCTTCTTTGTAGATaGTCTTCAGCACACTCATCCTCCCCAGCTTCAGGGGCGTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PASASSAVAHPLLCR*SSAHSSSPASGASQ Trigger: TTGAGACGCCCCTGAAGCTGGGGAGGATGAGTGTGCTGAAGACCATCTACAAAGAAGAGGATGAGCTACAGCACTGGATGCAGATGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTGGGCACTTGTCTGTCATGTCTaGTATCTGCTGCTTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTSHIDWLCQQGPGLSWALVCHV*YLLLPF Trigger: GAACGGAAGCAGCAGATACAAGACATGACAGACAAG...TGCCCAGCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCGACCACACGAGTCTGTaGCTCTGTCTGTTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSDHTSL*LCLLDD Trigger: ATCATCCAACAGACAGAGCAACAGACTCGTGTGGTC...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 90 bp | CGCCCTTTTGCTTCAGCTGACTGTAGAAGTCACTCCTCTCCGAGATaGTCCTCTGCAGGGATTCCAGGATGTAGCTATCAGAGAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPFASADCRSHSSPR*SSAGIPGCSYQRVP Trigger: TGGAACTCTCTGATAGCTACATCCTGGAATCCCTGCAGAGGATCATCTCGGAGAGGAGTGACTTCTACAGTCAGCTGAAGCAAAAGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS-3UTR CAA 90 bp | TATCACAGAACTAGCCACATAGACTGGCTTTGCCAGCAGGGTCCTGGTCTCAGCTTCCAGCTCTTTGGTTaGGGTGTTCAGCTCTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YHRTSHIDWLCQQGPGLSFQLFG*GVQLFN Trigger: ATTAAAGAGCTGAACACCCAAACCAAAGAGCTGGAA...GCTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 90 bp | ATAGTCCGCTCACTGCTGATGAGATCCATCTTCAAGTCTGCAACTTaGTGTCGGAGGACCAGGTTTTCCTTCTCAATGAGTCCCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: IVRSLLMRSIFKSAT*CRRTRFSFSMSPII Trigger: GATAATGGGACTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGATCTCATCAGCAGTGAGCGGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 90 bp | CTCTTTAATAGTCCGCTCACTGCTGATGAGATCCATCTTCAAGTCTaGAACTTGCTGTCGGAGGACCAGGTTTTCCTTCTCAATGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFNSPLTADEIHLQV*NLLSEDQVFLLNES Trigger: GGACTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGATCTCATCAGCAGTGAGCGGACTATTAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 72 bp | CCTCCTCGGGTGGCCCCTCAGAGCTCTTTTCCTCTATaGCGCTTCCTGGTTCCACGTGCAGCTCCTTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: PPRVAPQSSFPL*RFLVPRAAPCY Trigger: GTAGCAAGGAGCTGCACGTGGAACCAGGAAGCGCCATAGAGGAAAAGAGCTCTGAGGGGCCACCCGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CCA 72 bp | TCCACACTGCTGGCAGAGCCCAGCCTGCCTAGGGGATaGTCCTCAGTCAACTTCCAAACTCCAGAGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: STLLAEPSLPRG*SSVNFQTPEQV Trigger: GACCTGCTCTGGAGTTTGGAAGTTGACTGAGGACCATCCCCTAGGCAGGCTGGGCTCTGCCAGCAGTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CCA 72 bp | TGGATGACTGAGATATACCAGGGCGTTCTGGTCCTCTaGGACTTCTTGACCACAGTGGGGCTGCCGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WMTEIYQGVLVL*DFLTTVGLPVG Trigger: TCCCACCGGCAGCCCCACTGTGGTCAAGAAGTCCCAGAGGACCAGAACGCCCTGGTATATCTCAGTCATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 72 bp | TGGCCCCTCAGAGCTCTTTTCCTCTATGGCGCTTCCTaGTTCCACGTGCAGCTCCTTGCTACTCTCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WPLRALFLYGAS*FHVQLLATLRH Trigger: ATGGCGGAGAGTAGCAAGGAGCTGCACGTGGAACCAGGAAGCGCCATAGAGGAAAAGAGCTCTGAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CAA 72 bp | CCTGGCCTGGGTGGCCTCCAGGACCACACGAGTCTGTaGCTCTGTCTGTTGGATGATCTCGTTACGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGLGGLQDHTSL*LCLLDDLVTCL Trigger: CAGACACGTAACGAGATCATCCAACAGACAGAGCAACAGACTCGTGTGGTCCTGGAGGCCACCCAGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS GCA 72 bp | GGGGTGACATTCCTCGTCCTCCCGAAGCTCCCACGATaGCTCTTCCTCATTCACCAATATCTCTCCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVTFLVLPKLPR*LFLIHQYLSLL Trigger: GAGGAGGGAGAGATATTGGTGAATGAGGAAGAGGCATCGTGGGAGCTTCGGGAGGACGAGGAATGTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS GCA 72 bp | CTGGCCTGGGTGGCCTCCAGGACCACACGAGTCTGTTaGTCTGTCTGTTGGATGATCTCGTTACGTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAWVASRTTRVC*SVCWMISLRVC Trigger: ACAGACACGTAACGAGATCATCCAACAGACAGAGCAACAGACTCGTGTGGTCCTGGAGGCCACCCAGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CCA 72 bp | CCGTGGGTAGTTGAGCTCACAAGCACTCTTGCTGAATaGAAAGACCCTCCCATCCACACTGCTGGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWVVELTSTLAE*KDPPIHTAGRA Trigger: GGCTCTGCCAGCAGTGTGGATGGGAGGGTCTTTCCATTCAGCAAGAGTGCTTGTGAGCTCAACTACCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CCA 72 bp | GCTGAGCCATCAGCTCCTCCTCAAAGGACTCCGTCATaGAGTAGGACCTCTTGGGGTGACATTCCTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEPSAPPQRTPS*SRTSWGDIPRP Trigger: AGGACGAGGAATGTCACCCCAAGAGGTCCTACTCCATGACGGAGTCCTTTGAGGAGGAGCTGATGGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | TTTGAGGCTTTGCTGGGTACTTTGCGGTTTCTTCTCTaGGTCCTGTGTGTCGCAGCCCCGGCTGGCTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: FEALLGTLRFLL*VLCVAAPAGYA Trigger: AGCATAGCCAGCCGGGGCTGCGACACACAGGACTCAGAGAAGAAACCGCAAAGTACCCAGCAAAGCCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | CCAGCTTCAGGGGCGTCTCAAAGGACCGGTCCATCTTaGTGGAAGCTGAAGAGGTTTCTGTGCCTTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PASGASQRTGPS*WKLKRFLCLCL Trigger: GAGGCAAAGGCACAGAAACCTCTTCAGCTTCCATCAAGATGGACCGGTCCTTTGAGACGCCCCTGAAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CAA 90 bp | GAGCTCTTTTCCTCTATGGCGCTTCCTGGTTCCACGTGCAGCTCCTaGCTACTCTCCGCCATGCTATATTCCTCCTGCATCTGCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELFSSMALPGSTCSS*LLSAMLYSSCICIQ Trigger: CTGGATGCAGATGCAGGAGGAATATAGCATGGCGGAGAGTAGCAAGGAGCTGCACGTGGAACCAGGAAGCGCCATAGAGGAAAAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | CTCCCATCAGGAGCAGAGAGTGATCCTTCTCATGGATaGCTGAGATATACCAGGGCGTTCTGGTCCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSGAESDPSHG*LRYTRAFWSSG Trigger: CCCAGAGGACCAGAACGCCCTGGTATATCTCAGTCATCCATGAGAAGGATCACTCTCTGCTCCTGATGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | GGGCGTCTCAAAGGACCGGTCCATCTTGATGGAAGCTaGAGAGGTTTCTGTGCCTTTGCCTCTGAGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GRLKGPVHLDGS*RGFCAFASEQV Trigger: AACCTGCTCAGAGGCAAAGGCACAGAAACCTCTTCAGCTTCCATCAAGATGGACCGGTCCTTTGAGACGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 72 bp | CTGGTTCCACGTGCAGCTCCTTGCTACTCTCCGCCATaGTATATTCCTCCTGCATCTGCATCCAGTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVPRAAPCYSPP*YIPPASASSAV Trigger: TACAGCACTGGATGCAGATGCAGGAGGAATATAGCATGGCGGAGAGTAGCAAGGAGCTGCACGTGGAACCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | TTCCACCGCCTCAGGTGGTCCTTGTCGGTGTTAACCTaGTCTTCCAGCTCTTTGGTTTGGGTGTTCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FHRLRWSLSVLT*SSSSLVWVFSS Trigger: AGAGCTGAACACCCAAACCAAAGAGCTGGAAGATCAGGTTAACACCGACAAGGACCACCTGAGGCGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 72 bp | TATCCGGCAGCCGCCTGGCTTGACTTTTTGAGGCTTTaGTGGGTACTTTGCGGTTTCTTCTCTGAGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YPAAAWLDFLRL*WVLCGFFSESC Trigger: ACAGGACTCAGAGAAGAAACCGCAAAGTACCCAGCAAAGCCTCAAAAAGTCAAGCCAGGCGGCTGCCGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 72 bp | TGTTGGATGATCTCGTTACGTGTCTGTAGGTCGTCATaGAAATCCTTCCACCGCCTCAGGTGGTCCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CWMISLRVCRSS*KSFHRLRWSLS Trigger: CGACAAGGACCACCTGAGGCGGTGGAAGGATTTGCATGACGACCTACAGACACGTAACGAGATCATCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS GCA 72 bp | ATCTTCTTGATCTTGCTAGGCAGGGAGACATCTGACTaGTGTAGTGGGGGCACCTTCACGCCCTTTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFLILLGRETSD*CSGGTFTPFCF Trigger: GAAGCAAAAGGGCGTGAAGGTGCCCCCACTACAGCAGTCAGATGTCTCCCTGCCTAGCAAGATCAAGAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CAA 90 bp | ATGCCTCTTCCTCATTCACCAATATCTCTCCCTCCTCAGTTCCTTTaGCTTCATCACCCTCCACCTCCTCCTCTTCCTCCTCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPLPHSPISLPPQFL*LHHPPPPPLPPPPP Trigger: AGGAGGAGGAGGAGGAAGAGGAGGAGGTGGAGGGTGATGAAGCAAAAGGAACTGAGGAGGGAGAGATATTGGTGAATGAGGAAGAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | CTCCTTGTCATAGAAGTATCCGGCAGCCGCCTGGCTTaGCTTTTTGAGGCTTTGCTGGGTACTTTGCGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVIEVSGSRLA*LFEALLGTLRF Trigger: AAACCGCAAAGTACCCAGCAAAGCCTCAAAAAGTCAAGCCAGGCGGCTGCCGGATACTTCTATGACAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | AAACGCTGGAGCTCTTCTCCCATCAGGAGCAGAGAGTaGTCCTTCTCATGGATGACTGAGATATACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRWSSSPIRSRE*SFSWMTEIYQG Trigger: GCCCTGGTATATCTCAGTCATCCATGAGAAGGATCACTCTCTGCTCCTGATGGGAGAAGAGCTCCAGCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS TCA 72 bp | GCTTCAGCTGACTGTAGAAGTCACTCCTCTCCGAGATaGTCCTCTGCAGGGATTCCAGGATGTAGCTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASADCRSHSSPR*SSAGIPGCSYQ Trigger: CTGATAGCTACATCCTGGAATCCCTGCAGAGGATCATCTCGGAGAGGAGTGACTTCTACAGTCAGCTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CAA 72 bp | TCCATCTTGATGGAAGCTGAAGAGGTTTCTGTGCCTTaGCCTCTGAGCAGGTTCTTCAGCTGCTTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SILMEAEEVSVP*PLSRFFSCFFR Trigger: CCTGAAGAAGCAGCTGAAGAACCTGCTCAGAGGCAAAGGCACAGAAACCTCTTCAGCTTCCATCAAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
||
| CDS CAA 90 bp | CAGGTGGTCCTTGTCGGTGTTAACCTGATCTTCCAGCTCTTTGGTTaGGGTGTTCAGCTCTTTAATAGTCCGCTCACTGCTGATGAGATC | + |
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Preference number: 6 (lower is better) Translates to: QVVLVGVNLIFQLFG*GVQLFNSPLTADEI Trigger: GATCTCATCAGCAGTGAGCGGACTATTAAAGAGCTGAACACCCAAACCAAAGAGCTGGAAGATCAGGTTAACACCGACAAGGACCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CCA 72 bp | AGGGAATATCTGGACCTAGTGAATTCCAGCTCTCTCTaGAAGTCCATCAACATCCGTTCATACTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: REYLDLVNSSSL*KSINIRSYSSS Trigger: GCTGGAGGAGTATGAACGGATGTTGATGGACTTCCAGAGAGAGCTGGAATTCACTAGGTCCAGATATTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CAA 72 bp | CTCACTGCTGATGAGATCCATCTTCAAGTCTGCAACTaGCTGTCGGAGGACCAGGTTTTCCTTCTCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LTADEIHLQVCN*LSEDQVFLLNE Trigger: CTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGATCTCATCAGCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CAA 90 bp | AATAGTCCGCTCACTGCTGATGAGATCCATCTTCAAGTCTGCAACTaGCTGTCGGAGGACCAGGTTTTCCTTCTCAATGAGTCCCATTAT | + |
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Preference number: 6 (lower is better) Translates to: NSPLTADEIHLQVCN*LSEDQVFLLNESHY Trigger: ATAATGGGACTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGATCTCATCAGCAGTGAGCGGACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS GCA 72 bp | TCACTGCTGATGAGATCCATCTTCAAGTCTGCAACTTaGTGTCGGAGGACCAGGTTTTCCTTCTCAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SLLMRSIFKSAT*CRRTRFSFSMS Trigger: ACTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACTTGAAGATGGATCTCATCAGCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CAA 72 bp | CTTGTCGGTGTTAACCTGATCTTCCAGCTCTTTGGTTaGGGTGTTCAGCTCTTTAATAGTCCGCTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LVGVNLIFQLFG*GVQLFNSPLTA Trigger: AGCAGTGAGCGGACTATTAAAGAGCTGAACACCCAAACCAAAGAGCTGGAAGATCAGGTTAACACCGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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| CDS CAA 72 bp | GCTTTTCTCATATCTTCCATTTCAGACAAAAAGCCGTaGTGTTTGCTGAGTTTCCTGATCTGGTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AFLISSISDKKP*CLLSFLIWSSL Trigger: CAAGGAGGACCAGATCAGGAAACTCAGCAAACACAACGGCTTTTTGTCTGAAATGGAAGATATGAGAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047207.7 |
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