Pregenerated sensors for CCDC24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078588Ensembl transcript IDs: ENSMUST00000106422.9, ENSMUST00000131938.2, ENSMUST00000164853.8, ENSMUST00000167287.8, ENSMUST00000171052.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTaGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PPNPCSHHGDWEADR*RPAPSHPVWDGCCH Trigger: GTGACAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR CCA 90 bp | GACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTaGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: DWEADRWRPAPSHPV*DGCCHLDHHCSCPQ Trigger: CTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR TCA 90 bp | TGGGCGCTACGCTCCCACTACAACCCCCTCTCCCGAAGACGGGTTTaGGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGT | + |
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Preference number: 1 (lower is better) Translates to: WALRSHYNPLSRRRV*GPATAPGQGPDSHR Trigger: ACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGGGAGCGTAGCGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | TCTCTTTGCGATAGCTGTACCGAAGTTGCCGTCCCCAGCGGCGGGTaGTTGTCTGTCCTTGAGGGTGGGGGCAGCGCTCCGAAGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLCDSCTEVAVPSGG*LSVLEGGGSAPKEV Trigger: CACCTCCTTCGGAGCGCTGCCCCCACCCTCAAGGACAGACAAGCACCCGCCGCTGGGGACGGCAACTTCGGTACAGCTATCGCAAAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| 3UTR TCA 90 bp | CCAGCTCTGCCGCACAGATGGGGACACACTTCTTCAGGTGAGGAGTaGAGATGGACTGAACGGGGACGCTGGACGGGACGGGCAGGCGAA | + |
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Preference number: 1 (lower is better) Translates to: PALPHRWGHTSSGEE*RWTERGRWTGRAGE Trigger: TTCGCCTGCCCGTCCCGTCCAGCGTCCCCGTTCAGTCCATCTTCACTCCTCACCTGAAGAAGTGTGTCCCCATCTGTGCGGCAGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | CCACTACAACCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTaGACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCT | + |
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Preference number: 1 (lower is better) Translates to: PLQPPLPKTGLRSSH*TRTRPRFPSWAVTA Trigger: AGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | GCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTaGTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACAC | + |
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Preference number: 1 (lower is better) Translates to: ADRWRPAPSHPVWDG*CHLDHHCSCPQCLH Trigger: GTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | ACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTaGAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TAPAASRTPGYERNC*KGRNPTQPLLPPRR Trigger: TCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | ATCCCCTGCCCCAGCCTTGGGTCCAGTGTGTCTTCCAGGCCTGCCTaGACCTCACTTGGCTGCTCCAGGGTCTCTATCCTTTGTTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: IPCPSLGSSVSSRPA*TSLGCSRVSILCSN Trigger: GTTGGAACAAAGGATAGAGACCCTGGAGCAGCCAAGTGAGGTGCAGGCAGGCCTGGAAGACACACTGGACCCAAGGCTGGGGCAGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | TGGGCTGTGGCCATCGGCTTCCTCATGGCTTTGTCGTCTGTCATCTaGATCCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGATGGG | + |
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Preference number: 1 (lower is better) Translates to: WAVAIGFLMALSSVI*IPLYALFQLCRTDG Trigger: CCCATCTGTGCGGCAGAGCTGGAACAGCGCGTACAGTGGGATGCAGATGACAGACGACAAAGCCATGAGGAAGCCGATGGCCACAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR TCA 90 bp | ATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATaGGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: IVGSNGSSRFQDSRI*AQLLQGEKPHPTLA Trigger: AGCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | CCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTaGCCAAAGCACTTGTTTATGGAGGGAAAGAAGGGGACTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PGCQAQPAKAHDPAA*PKHLFMEGKKGTSL Trigger: CAGAGAAGTCCCCTTCTTTCCCTCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGGCCTGACAACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | GTGCCTGGGATGCTGCACTGGAAACTGATGTGGAAGTTGTCTCTTTaGGATAGCTGTACCGAAGTTGCCGTCCCCAGCGGCGGGTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VPGMLHWKLMWKLSL*DSCTEVAVPSGGCL Trigger: CAAGCACCCGCCGCTGGGGACGGCAACTTCGGTACAGCTATCGCAAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| 3UTR CCA 90 bp | ATCCAGTACCGGCCAATCACCTACAACCACTACCAGTACCCAGGCTaGGCTGTGGCCATCGGCTTCCTCATGGCTTTGTCGTCTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: IQYRPITYNHYQYPG*AVAIGFLMALSSVI Trigger: GATGACAGACGACAAAGCCATGAGGAAGCCGATGGCCACAGCCCAGCCTGGGTACTGGTAGTGGTTGTAGGTGATTGGCCGGTACTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR TCA 90 bp | TGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGTaGCCCTTCAGGTCGGTGCCTGGGATGCTGCACTGGAAACTGATG | + |
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Preference number: 1 (lower is better) Translates to: WRQQQMGESQQKPVL*PFRSVPGMLHWKLM Trigger: CATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCTGAAGGGTCACAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| 3UTR GCA 90 bp | GAGAGGACGGCTGCTTTTCAAGGTGGCAGCCGCTTACTTGTTCTCTaGCAGTTCAGGACTCTGGCAAAAACCGTGTCTTCATGCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ERTAAFQGGSRLLVL*QFRTLAKTVSSCPA Trigger: GGCTGGGCATGAAGACACGGTTTTTGCCAGAGTCCTGAACTGGCAGAGAACAAGTAAGCGGCTGCCACCTTGAAAAGCAGCCGTCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | AGGAGGCCTGCCAGGCTTCCTATGGCCTCTGATACCCTCATGCTCTaGCCTGAGCTGTTTCACTATGGGATAAGAGGTTCTGTGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: RRPARLPMASDTLML*PELFHYGIRGSVST Trigger: TGTGGACACAGAACCTCTTATCCCATAGTGAAACAGCTCAGGGCAGAGCATGAGGGTATCAGAGGCCATAGGAAGCCTGGCAGGCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR CCA 90 bp | AAGCAGTGTCCAAAGCACTTTGGAGGAGGCCTGCCAGGCTTCCTATaGCCTCTGATACCCTCATGCTCTGCCCTGAGCTGTTTCACTATG | + |
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Preference number: 1 (lower is better) Translates to: KQCPKHFGGGLPGFL*PLIPSCSALSCFTM Trigger: CATAGTGAAACAGCTCAGGGCAGAGCATGAGGGTATCAGAGGCCATAGGAAGCCTGGCAGGCCTCCTCCAAAGTGCTTTGGACACTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR TCA 90 bp | TTTTGTGACCCTTCAGGTCGGTGCCTGGGATGCTGCACTGGAAACTaGTGTGGAAGTTGTCTCTTTGCGATAGCTGTACCGAAGTTGCCG | + |
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Preference number: 1 (lower is better) Translates to: FCDPSGRCLGCCTGN*CGSCLFAIAVPKLP Trigger: CGGCAACTTCGGTACAGCTATCGCAAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCTGAAGGGTCACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| 3UTR CCA 90 bp | TCATCCTTAGCTCTACTGCCTAGAGAGGACGGCTGCTTTTCAAGGTaGCAGCCGCTTACTTGTTCTCTGCCAGTTCAGGACTCTGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SSLALLPREDGCFSR*QPLTCSLPVQDSGK Trigger: TTTGCCAGAGTCCTGAACTGGCAGAGAACAAGTAAGCGGCTGCCACCTTGAAAAGCAGCCGTCCTCTCTAGGCAGTAGAGCTAAGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR TCA 90 bp | ATTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTaGCACTCTTCCTCCAGAAGGCTTCTCAGGTGTCTGACAACTTGG | + |
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Preference number: 1 (lower is better) Translates to: ISRQCCRSEISFCNM*HSSSRRLLRCLTTW Trigger: CCAAGTTGTCAGACACCTGAGAAGCCTTCTGGAGGAAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| 3UTR CCA 90 bp | AGGTTAGTAAAGATGTCACACACATATGGTGCCCTAGGTTCAGTGTaGGGAAGGTCAGAGGAACTTAAGCTCCGGGATGCCCCTAAATGC | + |
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Preference number: 1 (lower is better) Translates to: RLVKMSHTYGALGSV*GRSEELKLRDAPKC Trigger: GCATTTAGGGGCATCCCGGAGCTTAAGTTCCTCTGACCTTCCCCACACTGAACCTAGGGCACCATATGTGTGTGACATCTTTACTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR GCA 90 bp | GTAGGTTTTAATGAAATTTCTATTCCTGTCTCTGAGCTGCTGATGTaGTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: VGFNEISIPVSELLM*FVWVPRGRKSSWDG Trigger: CCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAGCAGCTCAGAGACAGGAATAGAAATTTCATTAAAACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR CAA 90 bp | CCCCCTCTGCAGTCAGAGCACCTTCTCCCAAGACCCGCAGTCCGTTaGTCCGTCCTCTGTGCCCTCTGCAGTGACAGCCCTGGCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PPLQSEHLLPRPAVR*SVLCALCSDSPGQA Trigger: GGCTTGGCCAGGGCTGTCACTGCAGAGGGCACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCTCTGACTGCAGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR CAA 90 bp | CTGGGCGCTACGCTCCCACTACAACCCCCTCTCCCGAAGACGGGTTaGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCG | + |
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Preference number: 2 (lower is better) Translates to: LGATLPLQPPLPKTG*RSSHCTRTRPRFPS Trigger: CGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGGGAGCGTAGCGCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTGGAGCTGTGGCAGCTaGAGGCAACAACAGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: GAVAAGGNNRWASLSRSLWSCGS*RQQQMG Trigger: GCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCA...CAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCAGTGCGGTAACCTCAAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGGTAGCAATAACGGTGTaGCGCCCGCCGCTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TVSAVTSSVRPCRTGSRVVAITV*RPPLPS Trigger: ACTGGGCAGCGGCGGGCGGCACACCGTTATTGCTAC...CACTCGGCTTCCTGTTCTGCATGGCCTGACACTTGAGGTTACCGCACTGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTGCTACTGGACACAGCATCTGTAGCCCCTGGGCACCCTCCAAGCTGTCATGTTCCACATTCCCTTaGCCACCCTCCACCAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: VSATGHSICSPWAPSKLSCSTFP*PPSTRS Trigger: CGACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACA...TGACAGCTTGGAGGGTGCCCAGGGGCTACAGATGCTGTGTCCAGTAGCAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCGACAAGGGGTGGGGCTaGGACCAGACCAACACACAG | + |
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Preference number: 2 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLDKGWG*DQTNTQ Trigger: CTGTGTGTTGGTCTGGTCCCAGCCCCACCCCTTGTC...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGTGGACAAGGGGTGGGGCTaGGACCAGACCAACACACAG | + |
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Preference number: 2 (lower is better) Translates to: WQLEATTDGRVSAEACFVDKGWG*DQTNTQ Trigger: CTGTGTGTTGGTCTGGTCCCAGCCCCACCCCTTGTC...CACAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTCCTCCAAGGCTCTGTaGAGGCTTGTGCAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ELWQLEATTDGRVSAEACSSKAL*RLVQRR Trigger: TCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGA...ACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGTGGAGCTGTGGCAGCTaGAGGCAACAACAGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: CGSWRQQQMGESQQKPVLWSCGS*RQQQMG Trigger: GCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCA...CAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAATTGTATTACCTGTGGTTGCCATCCCCTGCCCCAGCCTTGGGTCCAGTGTTGAGCCCAGAGCCCTaGGGAAGGGGACCCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FKLYYLWLPSPAPALGPVLSPEP*GRGPCS Trigger: GGAACAGGGTCCCCTTCCCCAGGGCTCTGGGCTCAA...CACTGGACCCAAGGCTGGGGCAGGGGATGGCAACCACAGGTAATACAATTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCAGTGCGGTAACCTCAAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGCTGTCTCTGAGCTGCTaGTGTGCTTTGTCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TVSAVTSSVRPCRTGSRVLSLSC*CALSGS Trigger: GGACCCAGACAAAGCACATCAGCAGCTCAGAGACAG...CACTCGGCTTCCTGTTCTGCATGGCCTGACACTTGAGGTTACCGCACTGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGCTGCTGATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGGAGGCAACAACAGATaGGCGAGTCTCAGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SELLMCFVWVPRGRKSSWGGNNR*ASLSRS Trigger: GCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCC...CCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAGCAGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGGAGGCAACAACAGATaGGCGAGTCTCAGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: EMELWQLEATTDGRVSAEGGNNR*ASLSRS Trigger: GCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCC...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGAGGCTTGTGCAGAGGAGAAGAGAATGAAGCAGAAATaGAGCTGTGGCAGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GMGTSVLQGSVEACAEEKRMKQK*SCGSWR Trigger: CCTCCAGCTGCCACAGCTCCATTTCTGCTTCATTCT...CTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGGTTCCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | CACTATGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGGGACGAAAGTCAAGCTaGGATGGGAACCTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HYGIRGSVSTSHRFPSASGRKSS*DGNLCP Trigger: AGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCC...CGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCAGTGCGGTAACCTCAAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGCACGACCCAGCAGCCTaGCCAAAGCACTTGTTTATG | + |
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Preference number: 2 (lower is better) Translates to: TVSAVTSSVRPCRTGSRVHDPAA*PKHLFM Trigger: CATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTG...CACTCGGCTTCCTGTTCTGCATGGCCTGACACTTGAGGTTACCGCACTGACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGGCAGAAATGGAGCTGTaGCAGCTGGAGGCAACAACA | + |
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Preference number: 2 (lower is better) Translates to: CGSWRQQQMGESQQKPVLAEMEL*QLEATT Trigger: TGTTGTTGCCTCCAGCTGCCACAGCTCCATTTCTGC...CAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTCCAAGGCTCTAGAATGAAGCAGAAATaGAGCTGTGGCAGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLGDESQAGMGTSVLQGSRMKQK*SCGSWR Trigger: CCTCCAGCTGCCACAGCTCCATTTCTGCTTCATTCT...AGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAATTGTATTACCTGTGGTTGCCATCCCCTGCCCCAGCCTTGGGTCCAGTGGGAGGCAACAACAGATaGGCGAGTCTCAGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FKLYYLWLPSPAPALGPVGGNNR*ASLSRS Trigger: GCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCC...CACTGGACCCAAGGCTGGGGCAGGGGATGGCAACCACAGGTAATACAATTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACCCCAGAACAGACCCTAGCCTCTGCCCAGGAAAATCTGTATCTTCCTCCTGCAGAAATGGAGCTGTaGCAGCTGGAGGCAACAACA | + |
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Preference number: 2 (lower is better) Translates to: LTPEQTLASAQENLYLPPAEMEL*QLEATT Trigger: TGTTGTTGCCTCCAGCTGCCACAGCTCCATTTCTGC...AGGAGGAAGATACAGATTTTCCTGGGCAGAGGCTAGGGTCTGTTCTGGGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTTTCAAGGTGGCAGCCGCTTACTTGTTCTCTGCCAGTTCAGGACTCTGCTGATGTGCTTTGTCTaGGTCCCTAGGGGACGAAAG | + |
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Preference number: 2 (lower is better) Translates to: AAFQGGSRLLVLCQFRTLLMCFV*VPRGRK Trigger: CTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAG...CAGAGTCCTGAACTGGCAGAGAACAAGTAAGCGGCTGCCACCTTGAAAAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGATTTTGAGTTAAACAGATGGAAGCCAAGCAGAGACTaGGGCCCCGCTCTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KCQAMQNRKPSDFELNRWKPSRD*GPALLE Trigger: CTCCAGGAGAGCGGGGCCCCAGTCTCTGCTTGGCTT...CCATCTGTTTAACTCAAAATCACTCGGCTTCCTGTTCTGCATGGCCTGACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATGTGGAAGTTGTCTCTTTGCGATAGCTGTACCGAAGTTGCCGTCCCCAGCAGAATGAAGCAGAAATaGAGCTGTGGCAGCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LMWKLSLCDSCTEVAVPSRMKQK*SCGSWR Trigger: CCTCCAGCTGCCACAGCTCCATTTCTGCTTCATTCT...GCTGGGGACGGCAACTTCGGTACAGCTATCGCAAAGAGACAACTTCCACATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCATCTTCACGGTGATCCAGTACCGGCCAATCACCTACAACCACTACCAGTATCTTCAGGTGAGGAGTaGAGATGGACTGAACGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SHLHGDPVPANHLQPLPVSSGEE*RWTERG Trigger: TCCCCGTTCAGTCCATCTTCACTCCTCACCTGAAGA...TACTGGTAGTGGTTGTAGGTGATTGGCCGGTACTGGATCACCGTGAAGATGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAAGCGATGGCAAAGCACTTGTTTATaGAGGGAAAGAAGGGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: CLHILWMPRQQLGVGKRWQSTCL*RERRGL Trigger: AAGTCCCCTTCTTTCCCTCCATAAACAAGTGCTTTG...CCATCGCTTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | GAGCCCTGGGGAAGGGGACCCTGTTCCACATTCCCTTaGCCACCCTCCACCAGGTCGGAGGCCCAGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EPWGRGPCSTFP*PPSTRSEAQSS Trigger: GGAAGACTGGGCCTCCGACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACAGGGTCCCCTTCCCCAGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTaGCCCATCACACCCTGTCTGGGATGGCTGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPRRLGGGQVEA*PITPCLGWLLS Trigger: TGACAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTaGGAGGCGGACAGGTGGAGGCCTGCCCCATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: ETPPNPCSHHGD*EADRWRPAPSH Trigger: GTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | CCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTaGACCCGGACAAGGCCCAGATTCCCATCGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPLPKTGLRSSH*TRTRPRFPSWA Trigger: TGCCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | CCACAAAGCCAAGCAGAGACTGGGGCCCCGCTCTCCTaGAGCACCGGACTGGGCGCTACGCTCCCACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PQSQAETGAPLS*STGLGATLPLQ Trigger: TTGTAGTGGGAGCGTAGCGCCCAGTCCGGTGCTCCAGGAGAGCGGGGCCCCAGTCTCTGCTTGGCTTTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CGCTCCCACTACAACCCCCTCTCCCGAAGACGGGTTTaGGGTCCAGCCACTGCACCCGGACAAGGCCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RSHYNPLSRRRV*GPATAPGQGPD Trigger: ATCTGGGCCTTGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGGGAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | ACACCACCTTTTGCTGACCTAGGAGGAGGGCCAGCCTaGGGTCCAGGAGGGGCGCTACTCCGCCTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: TPPFADLGGGPA*GPGGALLRLTS Trigger: TGATGTGAGGCGGAGTAGCGCCCCTCCTGGACCCCAGGCTGGCCCTCCTCCTAGGTCAGCAAAAGGTGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | TGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTaGTGTCACCTTGACCACCACTGCTCATGTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WRPAPSHPVWDG*CHLDHHCSCPQ Trigger: CTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTGTTCCAGCTCTGCCGCACAGATGGGGACACACTTCTTCAGGTGAGGAGTCTCCCGAAGACGGGTTaGAGGTCCAGCCACTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ALFQLCRTDGDTLLQVRSLPKTG*RSSHCT Trigger: GGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAG...ACTCCTCACCTGAAGAAGTGTGTCCCCATCTGTGCGGCAGAGCTGGAACAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | TCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTaGCCAGTGTTCCTGACCCCAGAACAGACCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVSTSHRFPSAS*PVFLTPEQTLA Trigger: GGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CCGCACAGATGGGGACACACTTCTTCAGGTGAGGAGTaGAGATGGACTGAACGGGGACGCTGGACGGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: PHRWGHTSSGEE*RWTERGRWTGR Trigger: CCGTCCCGTCCAGCGTCCCCGTTCAGTCCATCTTCACTCCTCACCTGAAGAAGTGTGTCCCCATCTGTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | TGTATTACCTGTGGTTGCCATCCCCTGCCCCAGCCTTaGGTCCAGTGTGTCTTCCAGGCCTGCCTGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: CITCGCHPLPQP*VQCVFQACLHL Trigger: GAGGTGCAGGCAGGCCTGGAAGACACACTGGACCCAAGGCTGGGGCAGGGGATGGCAACCACAGGTAATACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | AGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCCCTCTaGAGTGACAGCCCTGGCCAAGCCACTTCTAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RPAVRLSVLCAL*SDSPGQATSNP Trigger: AGGATTAGAAGTGGCTTGGCCAGGGCTGTCACTGCAGAGGGCACAGAGGACGGACAAACGGACTGCGGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | GCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTaGAAGGGGAGAAACCCCACCCAACCCTTGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AASRTPGYERNC*KGRNPTQPLLP Trigger: TGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | GCCATCGGCTTCCTCATGGCTTTGTCGTCTGTCATCTaGATCCCACTGTACGCGCTGTTCCAGCTCTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: AIGFLMALSSVI*IPLYALFQLCR Trigger: GCGGCAGAGCTGGAACAGCGCGTACAGTGGGATGCAGATGACAGACGACAAAGCCATGAGGAAGCCGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | CGGCCAATCACCTACAACCACTACCAGTACCCAGGCTaGGCTGTGGCCATCGGCTTCCTCATGGCTTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: RPITYNHYQYPG*AVAIGFLMALS Trigger: CGACAAAGCCATGAGGAAGCCGATGGCCACAGCCCAGCCTGGGTACTGGTAGTGGTTGTAGGTGATTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | AGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATaGGCGCAATTGTTGCAAGGGGAGAAACCCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNGSSRFQDSRI*AQLLQGEKPHP Trigger: TGGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGTaGCCCTTCAGGTCGGTGCCTGGGATGCTGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QQMGESQQKPVL*PFRSVPGMLHW Trigger: CCAGTGCAGCATCCCAGGCACCGACCTGAAGGGTCACAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR GCA 72 bp | GTCATCTGCATCCCACTGTACGCGCTGTTCCAGCTCTaGCGCACAGATGGGGACACACTTCTTCAGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VICIPLYALFQL*RTDGDTLLQVR Trigger: CCTCACCTGAAGAAGTGTGTCCCCATCTGTGCGGCAGAGCTGGAACAGCGCGTACAGTGGGATGCAGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | AAGCTGGGATGGGAACCTCTGTCCTCCAAGGCTCTGTaGAGGCTTGTGCAGAGGAGAAGGGGCCAAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLGWEPLSSKAL*RLVQRRRGQRL Trigger: AAGCCTTTGGCCCCTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | CTGAACGGGGACGCTGGACGGGACGGGCAGGCGAAGTaGAAACACTTCGAGCATAAGGGTTCTCTTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LNGDAGRDGQAK*KHFEHKGSLLT Trigger: TGTCAGAAGAGAACCCTTATGCTCGAAGTGTTTCCACTTCGCCTGCCCGTCCCGTCCAGCGTCCCCGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | CAGGCATGGCGAGTCCTTTCTACAGGTCCTCTGGTGTaGCCTGTGAGCCACCTGGCCAAGTCTCCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QAWRVLSTGPLV*PVSHLAKSPVS Trigger: AGAAACAGGAGACTTGGCCAGGTGGCTCACAGGCCACACCAGAGGACCTGTAGAAAGGACTCGCCATGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | AGTGTGTCTTCCAGGCCTGCCTGCACCTCACTTGGCTaGTCCAGGGTCTCTATCCTTTGTTCCAACCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSSRPACTSLG*SRVSILCSNPG Trigger: ACCAGGGTTGGAACAAAGGATAGAGACCCTGGAGCAGCCAAGTGAGGTGCAGGCAGGCCTGGAAGACACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | TGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTaGGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CFVWVPRGRKSS*DGNLCPPRLCG Trigger: TCCACAGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | GCAGCCGCTTACTTGTTCTCTGCCAGTTCAGGACTCTaGCAAAAACCGTGTCTTCATGCCCAGCCCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAAYLFSASSGL*QKPCLHAQPLP Trigger: AGGGAGGGGCTGGGCATGAAGACACGGTTTTTGCCAGAGTCCTGAACTGGCAGAGAACAAGTAAGCGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CGAAGTGGAAACACTTCGAGCATAAGGGTTCTCTTCTaGCACGCTTTTCACTGCGCCCCCTGCCTGCAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: RSGNTSSIRVLF*HAFHCAPCLQR Trigger: ACGCTGCAGGCAGGGGGCGCAGTGAAAAGCGTGTCAGAAGAGAACCCTTATGCTCGAAGTGTTTCCACTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | TATGTGTCTGCTACTGGACACAGCATCTGTAGCCCCTaGGCACCCTCCAAGCTGTCACAACAAGCTGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YVSATGHSICSP*APSKLSQQAGL Trigger: CAAGCCAGCTTGTTGTGACAGCTTGGAGGGTGCCCAGGGGCTACAGATGCTGTGTCCAGTAGCAGACACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTGTTTATGGAGGGAAAGAAGGGGACTTCTCTGTAGGAAGCTTGAGCCCACTGTTCCACATTCCCTaGCCCACCCTCCACCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ALVYGGKEGDFSVGSLSPLFHIP*PTLHQV Trigger: GACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACAG...TGGGCTCAAGCTTCCTACAGAGAAGTCCCCTTCTTTCCCTCCATAAACAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | TCAGAGGAACTTAAGCTCCGGGATGCCCCTAAATGCTaGCAGGCATGGCGAGTCCTTTCTACAGGTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEELKLRDAPKC*QAWRVLSTGPL Trigger: CAGAGGACCTGTAGAAAGGACTCGCCATGCCTGTCAGCATTTAGGGGCATCCCGGAGCTTAAGTTCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CCTTCAGGTCGGTGCCTGGGATGCTGCACTGGAAACTaGTGTGGAAGTTGTCTCTTTGCGATAGCTGTACCG | + |
|
Preference number: 3 (lower is better) Translates to: PSGRCLGCCTGN*CGSCLFAIAVP Trigger: CGGTACAGCTATCGCAAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR GCA 72 bp | CCTGTCTGGGATGGCTGCTGTCACCTTGACCACCACTaGTCATGTCCCCAGTGTTTACACATCCTTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PVWDGCCHLDHH*SCPQCLHILWM Trigger: CATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | GGTCTAAGGCTGGGAATGGATGACCTCAAAGGCTTCTaGCTGCACAGGATGGGTAGATGTGAGGTGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GLRLGMDDLKGF*LHRMGRCEVVM Trigger: CATGACCACCTCACATCTACCCATCCTGTGCAGGCAGAAGCCTTTGAGGTCATCCATTCCCAGCCTTAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR CCA 72 bp | TCTATTCCTGTCTCTGAGCTGCTGATGTGCTTTGTCTaGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIPVSELLMCFV*VPRGRKSSWDG Trigger: CCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAGCAGCTCAGAGACAGGAATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | CTGGCAAAAACCGTGTCTTCATGCCCAGCCCCTCCCTaGGGTCCAACTTCTTTCACGAAGGTGTTGACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LAKTVSSCPAPP*GPTSFTKVLTV Trigger: AACTGTCAACACCTTCGTGAAAGAAGTTGGACCCCAGGGAGGGGCTGGGCATGAAGACACGGTTTTTGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | GCAGAAGCCTGTTTTGTGACCCTTCAGGTCGGTGCCTaGGATGCTGCACTGGAAACTGATGTGGAAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AEACFVTLQVGA*DAALETDVEVV Trigger: GACAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCTGAAGGGTCACAAAACAGGCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR TCA 72 bp | CAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTaGCACTCTTCCTCCAGAAGGCTTCTCAGGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QCCRSEISFCNM*HSSSRRLLRCL Trigger: CAGACACCTGAGAAGCCTTCTGGAGGAAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| 3UTR GCA 72 bp | GCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTaGAGAACTAGGGTTTTAAAGTCCGTAGGTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AITVCRPPLPSV*RTRVLKSVGFN Trigger: ATTAAAACCTACGGACTTTAAAACCCTAGTTCTGCACACACTGGGCAGCGGCGGGCGGCACACCGTTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | ACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTaGCCAGGAAAATCTGTATCTTCCTCCTCCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: TSVPDPRTDPSL*PGKSVSSSSRQ Trigger: TTGTCTGGAGGAGGAAGATACAGATTTTCCTGGGCAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | GCCAGGCTTCCTATGGCCTCTGATACCCTCATGCTCTaGCCTGAGCTGTTTCACTATGGGATAAGAGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARLPMASDTLML*PELFHYGIRGS Trigger: AGAACCTCTTATCCCATAGTGAAACAGCTCAGGGCAGAGCATGAGGGTATCAGAGGCCATAGGAAGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | AAGGTGAGGGCCCCGGGGCTGTACAGTGTTACTTGTTaGACTGCACCACTCAGCCCTGTTTATTTGTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KVRAPGLYSVTC*TAPLSPVYLCN Trigger: ATTACACAAATAAACAGGGCTGAGTGGTGCAGTCCAACAAGTAACACTGTACAGCCCCGGGGCCCTCACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CCA 72 bp | AGGTCGGTGCCTGGGATGCTGCACTGGAAACTGATGTaGAAGTTGTCTCTTTGCGATAGCTGTACCGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSVPGMLHWKLM*KLSLCDSCTEV Trigger: AACTTCGGTACAGCTATCGCAAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCAAGTCTCCTGTTTCTTTTAGATCTTTAGCTCTCCTCTTTCCAGAGAGGATGGCTGCTGTCACCTaGACCACCACTGCTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LAKSPVSFRSLALLFPERMAAVT*TTTAHV Trigger: GACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCAT...CCTCTCTGGAAAGAGGAGAGCTAAAGATCTAAAAGAAACAGGAGACTTGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CTCTCTACCCTCTCTAGTTCATTCTCATCTTCACGGTaGTCCAGTACCGGCCAATCACCTACAACCACTACC | + |
|
Preference number: 3 (lower is better) Translates to: LSTLSSSFSSSR*SSTGQSPTTTT Trigger: GGTAGTGGTTGTAGGTGATTGGCCGGTACTGGATCACCGTGAAGATGAGAATGAACTAGAGAGGGTAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR GCA 72 bp | AAATCATCCTTAGCTCTACTGCCTAGAGAGGACGGCTaGTTTTCAAGGTGGCAGCCGCTTACTTGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSSLALLPREDG*FSRWQPLTCSL Trigger: CAGAGAACAAGTAAGCGGCTGCCACCTTGAAAAGCAGCCGTCCTCTCTAGGCAGTAGAGCTAAGGATGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR TCA 72 bp | CTCTTCGGAGCTTTATGTGCCTGTGACAGCTCTTCTTaGCAAACCCCTTCCTTCCTTCATAACTGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LFGALCACDSSS*QTPSFLHNCSE Trigger: TTCACTGCAGTTATGAAGGAAGGAAGGGGTTTGTCAAGAAGAGCTGTCACAGGCACATAAAGCTCCGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CAA 72 bp | AGAGCCCTGGGGAAGGGGACCCTGTTCCACATTCCCTaGCCCACCCTCCACCAGGTCGGAGGCCCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RALGKGTLFHIP*PTLHQVGGPVF Trigger: GAAGACTGGGCCTCCGACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACAGGGTCCCCTTCCCCAGGGCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAGCGGCGGGTGCTTGTCTGTCCTTGAGGGTGGGGGCAGCGCTCCGAAGTCCATGGCCGCCTTCTaGTCCTTAATCTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGGCLSVLEGGGSAPKSMAAF*SLISPR Trigger: CCTGGGAGAGATTAAGGATCAGAAGGCGGCCATGGA...CTTCGGAGCGCTGCCCCCACCCTCAAGGACAGACAAGCACCCGCCGCTGGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGGTGCTTGTCTGTCCTTaGGGGTGGGGGCAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAVAAGGNNRWASLSRSLVLVCP*GWGQRS Trigger: GGAGCGCTGCCCCCACCCTCAAGGACAGACAAGCAC...CAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACCAACACACAGCTGGGGGAGGGAGGGAGAAACATGTGAGCGCATCTGAGGTGCTTGTCTGTCCTTaGGGGTGGGGGCAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDQHTAGGGREKHVSASEVLVCP*GWGQRS Trigger: GGAGCGCTGCCCCCACCCTCAAGGACAGACAAGCAC...CTCAGATGCGCTCACATGTTTCTCCCTCCCTCCCCCAGCTGTGTGTTGGTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGAGGCTTGTGCAGAGGAGAAGGGTCCCCAGCGGCGGGTaGTTGTCTGTCCTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWEPLSSKALWRLVQRRRVPSGG*LSVLEG Trigger: ACCCTCAAGGACAGACAAGCACCCGCCGCTGGGGAC...CCTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGGTTCCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGTCCATTTCCAGACAGTaGTGCAGGTCAGAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLGGGQVEACPITPCLGWSISRQ*CRSEIS Trigger: CGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGA...CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTCCAAGGCTCTGTCCCCAGCGGCGGGTaGTTGTCTGTCCTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGDESQAGMGTSVLQGSVPSGG*LSVLEG Trigger: ACCCTCAAGGACAGACAAGCACCCGCCGCTGGGGAC...AGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGAGGCTTGTGCAGAGGAGAAGGTACTGGGCCCACATCTaGGTCTGGTCCCTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWEPLSSKALWRLVQRRRYWAHI*VWSLPS Trigger: TGAGGGCAGGGACCAGACCCAGATGTGGGCCCAGTA...CCTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGGTTCCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTCCCTGGGACAGGTGCTaGCAGGTGAGGTTACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WSCGSWRQQQMGESQQKPPWDRC*QVRLPS Trigger: TGATGGTAACCTCACCTGTCAGCACCTGTCCCAGGG...AGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGTCCTCCAAGGCTCTGTGGAGGCTTGTGCAGAGGAGAAGGGGCCAAAGGGAGGGCTGGCAAGCCTaGATCTGCTCCATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSSKALWRLVQRRRGQREGWQA*ICSISR Trigger: TCTGGAAATGGAGCAGATGCAGGCTTGCCAGCCCTC...CCTTTGGCCCCTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGGAGGGCTGGCAAGCCTaGATCTGCTCCATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAVAAGGNNRWASLSRSLEGWQA*ICSISR Trigger: TCTGGAAATGGAGCAGATGCAGGCTTGCCAGCCCTC...CAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGCTACTGGACACAGCATCTGTAGCCCCTGGGCACCCTCCAAGCTGTCAGCCCACATCTGGGTCTaGTCCCTGCCCTCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VSATGHSICSPWAPSKLSAHIWV*SLPSLI Trigger: TATCAGTGAGGGCAGGGACCAGACCCAGATGTGGGC...TGACAGCTTGGAGGGTGCCCAGGGGCTACAGATGCTGTGTCCAGTAGCAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGACCCTGGGACTATACTaGGCCCACATCTGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLMCFVWVPRGRKSSWDGTLGLY*AHIWVW Trigger: CCAGACCCAGATGTGGGCCCAGTATAGTCCCAGGGT...CCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCTCCATGGCCGCCTTCTaGTCCTTAATCTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNGAVAAGGNNRWASLSSMAAF*SLISPR Trigger: CCTGGGAGAGATTAAGGATCAGAAGGCGGCCATGGA...GCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGAGAAGGCTGGGAATGGATaGCCTCAAAGGCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDESQAGMGTSVLQGSVEKAGNG*PQRLLP Trigger: AGGCAGAAGCCTTTGAGGTCATCCATTCCCAGCCTT...CTCCACAGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAAGGCTGGGAATGGATaGCCTCAAAGGCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WDKRFCVHIPPVPLSLVTKAGNG*PQRLLP Trigger: AGGCAGAAGCCTTTGAGGTCATCCATTCCCAGCCTT...GGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CATTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTGACACTCCACCAGCTCCCACAGTaGTGGGGAGTCCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFQTVLQVRDLVLQHVTLHQLPQ*WGVPGH Trigger: ATGCCCGGGGACTCCCCAGCACTGTGGGAGCTGGTG...GAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTGGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCCTGCATCTGCTCCATTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTCCGGGAGTGGAACATaGTCCTCCACCAGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QACICSISRQCCRSEISFSGSGT*SSTSSH Trigger: GTGGGAGCTGGTGGAGGAGCATGTTCCACTCCCGGA...GAACGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGAGCAGATGCAGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGGCCCACATCTGGGTCTaGTCCCTGCCCTCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CGSWRQQQMGESQQKPVLAHIWV*SLPSLI Trigger: TATCAGTGAGGGCAGGGACCAGACCCAGATGTGGGC...CAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTACCCTGGGACTATACTaGGCCCACATCTGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVWVPRGRKSSWDGNLCPTLGLY*AHIWVW Trigger: CCAGACCCAGATGTGGGCCCAGTATAGTCCCAGGGT...AGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| 3UTR CAA 72 bp | CCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTaGGATGCCAAGACAGCAGCTGGGGGTGGGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLMSPVFTHP*DAKTAAGGGKA Trigger: CGCTTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAAGCGATGGCCCTGGGACAGGTGCTaGCAGGTGAGGTTACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHILWMPRQQLGVGKRWPWDRC*QVRLPS Trigger: TGATGGTAACCTCACCTGTCAGCACCTGTCCCAGGG...CCATCGCTTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTCCATGGCCGCCTTCTaGTCCTTAATCTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLSMAAF*SLISPR Trigger: CCTGGGAGAGATTAAGGATCAGAAGGCGGCCATGGA...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCTGGGGGAGGGAGGGAGAAACATGTGAGCGCATCTGAGAATGAAGCAGAGGGCTGGCAAGCCTaGATCTGCTCCATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTAGGGREKHVSASENEAEGWQA*ICSISR Trigger: TCTGGAAATGGAGCAGATGCAGGCTTGCCAGCCCTC...TGCTTCATTCTCAGATGCGCTCACATGTTTCTCCCTCCCTCCCCCAGCTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGACCTCAAAGGCTTCTaGCTGTGCTTGGCAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EMELWQLEATTDGRVSAEDLKGF*LCLAAV Trigger: TACCGCTGCCAAGCACAGGCAGAAGCCTTTGAGGTC...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCTGGGGGAGGGAGGGAGAAACATGTGAGCGCATCTGAGAATGAAGCAGACCTCAAAGGCTTCTaGCTGTGCTTGGCAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTAGGGREKHVSASENEADLKGF*LCLAAV Trigger: TACCGCTGCCAAGCACAGGCAGAAGCCTTTGAGGTC...TGCTTCATTCTCAGATGCGCTCACATGTTTCTCCCTCCCTCCCCCAGCTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CCA 90 bp | GAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTCCTGGGATGCTGCACTaGAAACTGATGTGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELWQLEATTDGRVSAEACPGMLH*KLMWKL Trigger: CAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGG...ACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | TGCATCTGCTCCATTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACCCCTGGGACAGGTGCTaGCAGGTGAGGTTACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CICSISRQCCRSEISFCNPWDRC*QVRLPS Trigger: TGATGGTAACCTCACCTGTCAGCACCTGTCCCAGGG...GTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGAGCAGATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCTCCATTTCCAGACAGTaGTGCAGGTCAGAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRNGAVAAGGNNRWASLSSISRQ*CRSEIS Trigger: CGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGA...GCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTTGGCAAGCCTGCATCTaGTCCATTTCCAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWQLEATTDGRVSAEACFWQACI*SISRQC Trigger: GCACTGTCTGGAAATGGAGCAGATGCAGGCTTGCCA...AAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAATGGCAAGCCTGCATCTaGTCCATTTCCAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EMELWQLEATTDGRVSAEWQACI*SISRQC Trigger: GCACTGTCTGGAAATGGAGCAGATGCAGGCTTGCCA...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 ENSMUST00000167287.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTGACACTCTTCCTCCAGACTCAGGTCCACTaGTGCCTCCCCCAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLQVRDLVLQHVTLFLQTQVH*CLPQNP Trigger: AGGATTCTGGGGGAGGCAGCAGTGGACCTGAGTCTG...GAGGAAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS-3UTR CCA 90 bp | TGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGGGAGGGTCAGAGTTaGAAACTTGAGAAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WDKRFCVHIPPVPLSLVTREGQS*KLEKTG Trigger: TCCAGTCTTCTCAAGTTTCCAACTCTGACCCTCCCT...GGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTGACACTCTTAGGCCGCTCCGGGAGTaGAACATGCTCCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPDSAAGQRSRSATCDTLRPLRE*NMLLHQ Trigger: CTGGTGGAGGAGCATGTTCCACTCCCGGAGCGGCCT...AAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| 3UTR CAA 72 bp | AGACAAGGTGAGGGCCCCGGGGCTGTACAGTGTTACTaGTTGGACTGCACCACTCAGCCCTGTTTATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQGEGPGAVQCY*LDCTTQPCLFV Trigger: CACAAATAAACAGGGCTGAGTGGTGCAGTCCAACAAGTAACACTGTACAGCCCCGGGGCCCTCACCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| 3UTR CAA 72 bp | AGAGGACGGCTGCTTTTCAAGGTGGCAGCCGCTTACTaGTTCTCTGCCAGTTCAGGACTCTGGCAAAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RGRLLFKVAAAY*FSASSGLWQKP Trigger: CGGTTTTTGCCAGAGTCCTGAACTGGCAGAGAACAAGTAAGCGGCTGCCACCTTGAAAAGCAGCCGTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTCGTTCTGCAACATGTaGCACTCTTCCTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLSFCNM*HSSSRR Trigger: CCTTCTGGAGGAAGAGTGTCACATGTTGCAGAACGA...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACCAACACACAGCTGGGGGAGGGAGGGAGAAACATGTGAGCGCATCTGAGTGCTGCACTGGAAACTaGTGTGGAAGTTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PDQHTAGGGREKHVSASECCTGN*CGSCLF Trigger: AAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCA...CTCAGATGCGCTCACATGTTTCTCCCTCCCTCCCCCAGCTGTGTGTTGGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTGACACTCTTCCTCACTCAGGTCCACTGCTaGCTCCCCCAGAATCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVLQVRDLVLQHVTLFLTQVHC*LPQNPL Trigger: AAGAGGATTCTGGGGGAGGCAGCAGTGGACCTGAGT...GAGGAAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCTGCTGCACTGGAAACTaGTGTGGAAGTTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRNGAVAAGGNNRWASLSCCTGN*CGSCLF Trigger: AAAGAGACAACTTCCACATCAGTTTCCAGTGCAGCA...GCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR GCA 90 bp | CCATGGAGACAAGGGAAGGGTCTAAGGCTGGGAATGGATGACCTCAAAGGCTTCTCCATTTCCAGACAGTaGTGCAGGTCAGAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PWRQGKGLRLGMDDLKGFSISRQ*CRSEIS Trigger: CGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGA...GAAGCCTTTGAGGTCATCCATTCCCAGCCTTAGACCCTTCCCTTGTCTCCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCTGCTGATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGAGGGAGGGTCAGAGTTaGAAACTTGAGAAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SELLMCFVWVPRGRKSSWREGQS*KLEKTG Trigger: TCCAGTCTTCTCAAGTTTCCAACTCTGACCCTCCCT...CCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACATCAGCAGCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCTGCTACTGGACACAGCATCTGTAGCCCCTGGGCACCCTCCAAGCTGTTTAGACACATTCAGTTaGTCCTTGATGACAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCLLLDTASVAPGHPPSCLDTFS*SLMTVR Trigger: CCTCACTGTCATCAAGGACCAACTGAATGTGTCTAA...ACAGCTTGGAGGGTGCCCAGGGGCTACAGATGCTGTGTCCAGTAGCAGACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTTAGACACATTCAGTTaGTCCTTGATGACAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLLDTFS*SLMTVR Trigger: CCTCACTGTCATCAAGGACCAACTGAATGTGTCTAA...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAGTCTCCTGTTTCTTTTAGATCTTTAGCTCTCCTCTTTCCAGAGAGGTCGTTCTGCAACATGTaGCACTCTTCCTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAKSPVSFRSLALLFPERSFCNM*HSSSRR Trigger: CCTTCTGGAGGAAGAGTGTCACATGTTGCAGAACGA...CCTCTCTGGAAAGAGGAGAGCTAAAGATCTAAAAGAAACAGGAGACTTGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGATTTTGAGTTAAACAGATGGCCTGGGATGCTGCACTaGAAACTGATGTGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCQAMQNRKPSDFELNRWPGMLH*KLMWKL Trigger: CAACTTCCACATCAGTTTCCAGTGCAGCATCCCAGG...CCATCTGTTTAACTCAAAATCACTCGGCTTCCTGTTCTGCATGGCCTGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCTGCAACATGTGACACTCTTTTAGACACATTCAGTTaGTCCTTGATGACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FPDSAAGQRSRSATCDTLLDTFS*SLMTVR Trigger: CCTCACTGTCATCAAGGACCAACTGAATGTGTCTAA...AAGAGTGTCACATGTTGCAGAACGAGATCTCTGACCTGCAGCACTGTCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS-3UTR CAA 90 bp | TGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCGGTGCTTGTCTGTCCTaGAGGGTGGGGGCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: WDKRFCVHIPPVPLSLVTGACLS*RVGAAL Trigger: GAGCGCTGCCCCCACCCTCAAGGACAGACAAGCACC...GGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| CDS GCA 90 bp | TTCATTCCAGCCCTCCTCTCGCAACTCCAGACTCAGGTCCACTGCTaGCTCCCCCAGAATCCTCTTCACTTCAGGCCGCTCCGGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FIPALLSQLQTQVHC*LPQNPLHFRPLREW Trigger: CCACTCCCGGAGCGGCCTGAAGTGAAGAGGATTCTGGGGGAGGCAGCAGTGGACCTGAGTCTGGAGTTGCGAGAGGAGGGCTGGAATGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS GCA 90 bp | TTGTTCATTCCAGCCCTCCTCTCGCAACTCCAGACTCAGGTCCACTaGTGCCTCCCCCAGAATCCTCTTCACTTCAGGCCGCTCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LFIPALLSQLQTQVH*CLPQNPLHFRPLRE Trigger: CTCCCGGAGCGGCCTGAAGTGAAGAGGATTCTGGGGGAGGCAGCAGTGGACCTGAGTCTGGAGTTGCGAGAGGAGGGCTGGAATGAACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS-3UTR CAA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGGTGCTTGTCTGTCCTaGAGGGTGGGGGCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: EMELWQLEATTDGRVSAEGACLS*RVGAAL Trigger: GAGCGCTGCCCCCACCCTCAAGGACAGACAAGCACC...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAATAGCTGTACCGAAGTaGCCGTCCCCAGCGGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: EMELWQLEATTDGRVSAEIAVPK*PSPAAG Trigger: ACCCGCCGCTGGGGACGGCAACTTCGGTACAGCTAT...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCATAGCTGTACCGAAGTaGCCGTCCCCAGCGGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLIAVPK*PSPAAG Trigger: ACCCGCCGCTGGGGACGGCAACTTCGGTACAGCTAT...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGTCCTCCAAGGCTCTGTGGAGGCTTGTGCAGAGGAGAAGGGGCCAAAGGGGAGTTCCTGTTGTGTaGAGTCACACCTGGTATCCT | + |
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Preference number: 5 (lower is better) Translates to: PLSSKALWRLVQRRRGQRGVPVV*SHTWYP Trigger: AGGATACCAGGTGTGACTCAACACAACAGGAACTCC...CCTTTGGCCCCTTCTCCTCTGCACAAGCCTCCACAGAGCCTTGGAGGACAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | GAAATGGAGCTGTGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAACACCCTGTGTCTGTCTaGGTGTACCTGTGCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: EMELWQLEATTDGRVSAEHPVSV*VYLCLA Trigger: TGCCAAGCACAGGTACACCAAGACAGACACAGGGTG...TTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCACAGCTCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| CDS TCA 90 bp | TTGGTCCTTGATGACAGTGAGGTCCCTGGGACAGGTGCTGACAGGTaGGGTTACCATCACCCTCTCTGTGTTGTTCATTCCAGCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LVLDDSEVPGTGADR*GYHHPLCVVHSSPP Trigger: AGGAGGGCTGGAATGAACAACACAGAGAGGGTGATGGTAACCTCACCTGTCAGCACCTGTCCCAGGGACCTCACTGTCATCAAGGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS-3UTR CAA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCGGAGTTCCTGTTGTGTaGAGTCACACCTGGTATCCT | + |
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Preference number: 5 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLGVPVV*SHTWYP Trigger: AGGATACCAGGTGTGACTCAACACAACAGGAACTCC...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | TGGCAGCTGGAGGCAACAACAGATGGGCGAGTCTCAGCAGAAGCCTGTTTTGTGACATTCAGTTGGTCCTaGATGACAGTGAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: WQLEATTDGRVSAEACFVTFSWS*MTVRSL Trigger: CAGGGACCTCACTGTCATCAAGGACCAACTGAATGT...CACAAAACAGGCTTCTGCTGAGACTCGCCCATCTGTTGTTGCCTCCAGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | GTCAGAGCACCTTCTCCCAAGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCCCTAAACTGATGTGGAAGTaGTCTCTTTGCGATAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VRAPSPKTRSPFVRPLCPKLMWK*SLCDSC Trigger: ACAGCTATCGCAAAGAGACAACTTCCACATCAGTTT...AGGGCACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | CAAGCCTGCATCTGCTCCATTTCCAGACAGTGCTGCAGGTCAGAGATCTCGTTCACATTCAGTTGGTCCTaGATGACAGTGAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QACICSISRQCCRSEISFTFSWS*MTVRSL Trigger: CAGGGACCTCACTGTCATCAAGGACCAACTGAATGT...GAACGAGATCTCTGACCTGCAGCACTGTCTGGAAATGGAGCAGATGCAGGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS-3UTR CAA 90 bp | CCAGACCAACACACAGCTGGGGGAGGGAGGGAGAAACATGTGAGCGCATCTGAGATTAGACACATTCAGTaGGTCCTTGATGACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: PDQHTAGGGREKHVSASEIRHIQ*VLDDSE Trigger: CTCACTGTCATCAAGGACCAACTGAATGTGTCTAAT...CTCAGATGCGCTCACATGTTTCTCCCTCCCTCCCCCAGCTGTGTGTTGGTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTCAGAGCACCTTCTCCCAAGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCAGGTGTCTGACAACTaGGTCAATATTAGACACATT | + |
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Preference number: 5 (lower is better) Translates to: CSQSTFSQDPQSVCPSSVQVSDN*VNIRHI Trigger: AATGTGTCTAATATTGACCAAGTTGTCAGACACCTG...CACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCTCTGACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | AGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTCCAAGGCTCTGTGGAAAACTGATGTGGAAGTaGTCTCTTTGCGATAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RGRKSSWDGNLCPPRLCGKLMWK*SLCDSC Trigger: ACAGCTATCGCAAAGAGACAACTTCCACATCAGTTT...TCCACAGAGCCTTGGAGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS CCA 90 bp | CTTCTCAGGTGTCTGACAACTTGGTCAATATTAGACACATTCAGTTaGTCCTTGATGACAGTGAGGTCCCTGGGACAGGTGCTGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LLRCLTTWSILDTFS*SLMTVRSLGQVLGS Trigger: TGAGCCCAGCACCTGTCCCAGGGACCTCACTGTCATCAAGGACCAACTGAATGTGTCTAATATTGACCAAGTTGTCAGACACCTGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171052.8 |
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| CDS-3UTR CAA 90 bp | TTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCTGTCCTATTAGACACATTCAGTaGGTCCTTGATGACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: FVWVPRGRKSSWDGNLCPIRHIQ*VLDDSE Trigger: CTCACTGTCATCAAGGACCAACTGAATGTGTCTAAT...AGGACAGAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | ATGTGCTTTGTCTGGGTCCCTAGGGGACGAAAGTCAAGCTGGGATGGGAACCTCCAGGTGTCTGACAACTaGGTCAATATTAGACACATT | + |
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Preference number: 5 (lower is better) Translates to: MCFVWVPRGRKSSWDGNLQVSDN*VNIRHI Trigger: AATGTGTCTAATATTGACCAAGTTGTCAGACACCTG...GAGGTTCCCATCCCAGCTTGACTTTCGTCCCCTAGGGACCCAGACAAAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106422.9 ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTCAGGCCATGCAGAACAGGAAGCCGAGTGATTTTGAGTTAAACAGATGGACATTCAGTTGGTCCTaGATGACAGTGAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KCQAMQNRKPSDFELNRWTFSWS*MTVRSL Trigger: CAGGGACCTCACTGTCATCAAGGACCAACTGAATGT...CCATCTGTTTAACTCAAAATCACTCGGCTTCCTGTTCTGCATGGCCTGACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164853.8 |
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| CDS-3UTR CAA 90 bp | CCATGGAGACAAGGGAAGGGTCTAAGGCTGGGAATGGATGACCTCAAAGGCTTCCAGGTGTCTGACAACTaGGTCAATATTAGACACATT | + |
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Preference number: 5 (lower is better) Translates to: PWRQGKGLRLGMDDLKGFQVSDN*VNIRHI Trigger: AATGTGTCTAATATTGACCAAGTTGTCAGACACCTG...GAAGCCTTTGAGGTCATCCATTCCCAGCCTTAGACCCTTCCCTTGTCTCCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| CDS GCA 72 bp | GCCCTCCTCTCGCAACTCCAGACTCAGGTCCACTGCTaGCTCCCCCAGAATCCTCTTCACTTCAGGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: ALLSQLQTQVHC*LPQNPLHFRPL Trigger: GAGCGGCCTGAAGTGAAGAGGATTCTGGGGGAGGCAGCAGTGGACCTGAGTCTGGAGTTGCGAGAGGAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS CCA 72 bp | TGGCCCACCCTGTGTCTGTCTTGGTGTACCTGTGCTTaGCAGCGGTACAGGAAGGCCCCAGAGAGACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: WPTLCLSWCTCA*QRYRKAPERPV Trigger: TACAGGTCTCTCTGGGGCCTTCCTGTACCGCTGCCAAGCACAGGTACACCAAGACAGACACAGGGTGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| CDS CAA 72 bp | ATGGCCCACCCTGTGTCTGTCTTGGTGTACCTGTGCTaGGCAGCGGTACAGGAAGGCCCCAGAGAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: MAHPVSVLVYLC*AAVQEGPRETC Trigger: ACAGGTCTCTCTGGGGCCTTCCTGTACCGCTGCCAAGCACAGGTACACCAAGACAGACACAGGGTGGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167287.8 |
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| CDS CAA 90 bp | CTGGGACAGGTGCTGACAGGTGAGGTTACCATCACCCTCTCTGTGTaGTTCATTCCAGCCCTCCTCTCGCAACTCCAGACTCAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LGQVLTGEVTITLSV*FIPALLSQLQTQVH Trigger: GTGGACCTGAGTCTGGAGTTGCGAGAGGAGGGCTGGAATGAACAACACAGAGAGGGTGATGGTAACCTCACCTGTCAGCACCTGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131938.2 |
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| CDS CAA 90 bp | GACAGGTGCTGGGCTCATCAGCTCTCATCGGGAGTTCCTGTTGTGTaGAGTCACACCTGGTATCCTCTAAGGCAAAGCGAAGGACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DRCWAHQLSSGVPVV*SHTWYPLRQSEGPW Trigger: CCAGGGTCCTTCGCTTTGCCTTAGAGGATACCAGGTGTGACTCAACACAACAGGAACTCCCGATGAGAGCTGATGAGCCCAGCACCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171052.8 |
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| CDS CAA 90 bp | GCTTCTCAGGTGTCTGACAACTTGGTCAATATTAGACACATTCAGTaGGTCCTTGATGACAGTGAGGTCCCTGGGACAGGTGCTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASQVSDNLVNIRHIQ*VLDDSEVPGTGAGL Trigger: GAGCCCAGCACCTGTCCCAGGGACCTCACTGTCATCAAGGACCAACTGAATGTGTCTAATATTGACCAAGTTGTCAGACACCTGAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171052.8 |
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