Pregenerated sensors for CCDC194 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000108900Ensembl transcript IDs: ENSMUST00000207913.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGAGGAGGATGCTGGATCCCCTGGGACCAGAGTTTCCCATGTTTGTaGTGTGGTTGTGAAAGCAACCCCGGGTGTCTGCAAGAACAACAG | + |
Preference number: 1 (lower is better) Translates to: RGGCWIPWDQSFPCL*CGCESNPGCLQEQQ Trigger: CTGTTGTTCTTGCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGTCCCAGGGGATCCAGCATCCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 90 bp | GTTGTAAGGCTCACAAACTGTGAAATAAAGCAAACACGAGATTGTTaGGGAGGACATGGTGCTGTGTACCTTCAAGGGCAGCCAAGGCTA | + |
Preference number: 1 (lower is better) Translates to: VVRLTNCEIKQTRDC*GGHGAVYLQGQPRL Trigger: TAGCCTTGGCTGCCCTTGAAGGTACACAGCACCATGTCCTCCTCAACAATCTCGTGTTTGCTTTATTTCACAGTTTGTGAGCCTTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CCA 90 bp | TTTGTATATACTCATTTCTTGCATGTATATGCACACTTCTGTATGTaGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCCCTGGGACC | + |
Preference number: 1 (lower is better) Translates to: FVYTHFLHVYAHFCM*YQSSSEEDAGSPGT Trigger: GGTCCCAGGGGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATATACATGCAAGAAATGAGTATATACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 90 bp | CTCAGAAAAACCCTGTTAAATATGAGTTGTAAGGCTCACAAACTGTaGAATAAAGCAAACACGAGATTGTTGAGGAGGACATGGTGCTGT | + |
Preference number: 1 (lower is better) Translates to: LRKTLLNMSCKAHKL*NKANTRLLRRTWCC Trigger: ACAGCACCATGTCCTCCTCAACAATCTCGTGTTTGCTTTATTTCACAGTTTGTGAGCCTTACAACTCATATTTAACAGGGTTTTTCTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR TCA 90 bp | ACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAAGCAACCCCGGGTGTCTGCCCTTTCCCCGATGTGTaGCCCAGCCAGGTCCCCTTC | + |
Preference number: 2 (lower is better) Translates to: TRVSHVCDVVVKATPGVCPFPDV*PSQVPF Trigger: GAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGG...GCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR TCA 90 bp | ACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAAGCAACCCCGGGTGTCTGCGCCTCTAAAACACTCTaGCCATCCTGGCCCGAGGCT | + |
Preference number: 2 (lower is better) Translates to: TRVSHVCDVVVKATPGVCASKTL*PSWPEA Trigger: AGCCTCGGGCCAGGATGGTCAGAGTGTTTTAGAGGC...GCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR GCA 90 bp | ACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAAGCAACCCCGGGTGTCTGCACCTGGAGTTCTGCGTaGTCCAACTGGGTGAGCCCA | + |
Preference number: 2 (lower is better) Translates to: TRVSHVCDVVVKATPGVCTWSSA*SNWVSP Trigger: TGGGCTCACCCAGTTGGAGCACGCAGAACTCCAGGT...GCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR TCA 90 bp | TCCCCCAAGCCTCAGTCCTCATGGGTCAGAGACTGGAGGTGTTTGTGGTACTGGTCTTCATGTAGCCCCTaGTCCTCAAGGCTTCTTAGA | + |
Preference number: 2 (lower is better) Translates to: SPKPQSSWVRDWRCLWYWSSCSP*SSRLLR Trigger: TCTAAGAAGCCTTGAGGATCAGGGGCTACATGAAGA...CCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGACTGAGGCTTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 90 bp | GTTTCCCTATGTGATGATCTAGCACTGGGTGCTCCCGTGGAGAGGTaGGTTGTATCTGTGTGCTGCCACCTAGGCAAGTCTTGGGTGTTA | + |
Preference number: 2 (lower is better) Translates to: VSLCDDLALGAPVER*VVSVCCHLGKSWVL Trigger: TAACACCCAAGACTTGCCTAGGTGGCAGCACACAGATACAACCAACCTCTCCACGGGAGCACCCAGTGCTAGATCATCACATAGGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR GCA 90 bp | CCAGAGAGAGCCCTTTCCCCGATGTGTGACCCAGCCAGGTCCCCTTCCTACACTAGGCTTCTTAGAATTTaGAAGCCTCATTTTCGTGTG | + |
Preference number: 2 (lower is better) Translates to: PERALSPMCDPARSPSYTRLLRI*KPHFRV Trigger: CACACGAAAATGAGGCTTGCAAATTCTAAGAAGCCT...AGTGTAGGAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGGGCTCTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR TCA 90 bp | TCCCCCAAGCCTCAGTCCTCATGGGTCAGAGACTGGAGGTGTTTGTGGTACTGGGCCCAGCATCAACTATaGGATAAATGTTGTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: SPKPQSSWVRDWRCLWYWAQHQL*DKCCVL Trigger: CAAGACACAACATTTATCTCATAGTTGATGCTGGGC...CCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGACTGAGGCTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR GCA 90 bp | ACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAAGCAACCCCGGGTGTCTGCTTGAGGAGGACATGGTaGTGTGTACCTTCAAGGGCA | + |
Preference number: 2 (lower is better) Translates to: TRVSHVCDVVVKATPGVCLRRTW*CVPSRA Trigger: TGCCCTTGAAGGTACACAGCACCATGTCCTCCTCAA...GCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 90 bp | TTCTTAGAATTTGCAAGCCTCATTTTCGTGTGCCTCTGTTCTCTGTaGAAATCCCACCTGGAGTTCTGCGTGCTCCAACTGGGTGAGCCC | + |
Preference number: 2 (lower is better) Translates to: FLEFASLIFVCLCSL*KSHLEFCVLQLGEP Trigger: GGGCTCACCCAGTTGGAGCACGCAGAACTCCAGGTGGGATTTCAACAGAGAACAGAGGCACACGAAAATGAGGCTTGCAAATTCTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 90 bp | GAGAGAAAGGAGGAGAGTAGACGGGAGGGTGAGGTATTGTTTGACTaGTCAATGATTCTTTTGAGTCCCAGAGAGAGCCCTTTCCCCGAT | + |
Preference number: 2 (lower is better) Translates to: ERKEESRREGEVLFD*SMILLSPRESPFPD Trigger: ATCGGGGAAAGGGCTCTCTCTGGGACTCAAAAGAATCATTGACAAGTCAAACAATACCTCACCCTCCCGTCTACTCTCCTCCTTTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR CCA 90 bp | GATGCTGGATCCCCTGGGACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAATTGTTGAGGAGGACATaGTGCTGTGTACCTTCAAGG | + |
Preference number: 2 (lower is better) Translates to: DAGSPGTRVSHVCDVVVKLLRRT*CCVPSR Trigger: CCTTGAAGGTACACAGCACCATGTCCTCCTCAACAA...TTTCACAACCACATCACAAACATGGGAAACTCTGGTCCCAGGGGATCCAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR TCA 90 bp | TGCATGTATATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCAGGGCCTGAGTAAATaGGCCTCAGTTTCCCTATGT | + |
Preference number: 2 (lower is better) Translates to: CMYMHTSVCGTKVAQRRMQGLSK*ASVSLC Trigger: ACATAGGGAAACTGAGGCTCATTTACTCAGGCCCTG...CATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATATACATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR CAA 90 bp | CCAGAGAGAGCCCTTTCCCCGATGTGTGACCCAGCCAGGTCCCCTTCCTACACTTGCCTCTGTTCTCTGTaGAAATCCCACCTGGAGTTC | + |
Preference number: 3 (lower is better) Translates to: PERALSPMCDPARSPSYTCLCSL*KSHLEF Trigger: GAACTCCAGGTGGGATTTCAACAGAGAACAGAGGCA...AGTGTAGGAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGGGCTCTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 72 bp | TGCTGGATCCCCTGGGACCAGAGTTTCCCATGTTTGTaGTGTGGTTGTGAAAGCAACCCCGGGTGTCTGCAA | + |
Preference number: 3 (lower is better) Translates to: CWIPWDQSFPCL*CGCESNPGCLQ Trigger: TTGCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGTCCCAGGGGATCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 72 bp | CTGGGACCAGAGTTTCCCATGTTTGTGATGTGGTTGTaGAAGCAACCCCGGGTGTCTGCAAGAACAACAGGT | + |
Preference number: 3 (lower is better) Translates to: LGPEFPMFVMWL*KQPRVSARTTG Trigger: ACCTGTTGTTCTTGCAGACACCCGGGGTTGCTTTCACAACCACATCACAAACATGGGAAACTCTGGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR CAA 90 bp | ATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCCCCACCTAGGCAAGTCTaGGGTGTTAAGTTGATCGTG | + |
Preference number: 3 (lower is better) Translates to: MHTSVCGTKVAQRRMLDPPPRQV*GVKLIV Trigger: CACGATCAACTTAACACCCAAGACTTGCCTAGGTGG...GGGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR CAA 90 bp | TTGTTTGACTTGTCAATGATTCTTTTGAGTCCCAGAGAGAGCCCTTTCCCCGATGCTCCCGTGGAGAGGTaGGTTGTATCTGTGTGCTGC | + |
Preference number: 3 (lower is better) Translates to: LFDLSMILLSPRESPFPDAPVER*VVSVCC Trigger: GCAGCACACAGATACAACCAACCTCTCCACGGGAGC...ATCGGGGAAAGGGCTCTCTCTGGGACTCAAAAGAATCATTGACAAGTCAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR GCA 72 bp | TGGGTCAGAGACTGGAGGTGTTTGTGGTACTGGTCCTaGCTGCTATGTGCTGTCTCAGAAACAAATGAAGAG | + |
Preference number: 3 (lower is better) Translates to: WVRDWRCLWYWS*LLCAVSETNEE Trigger: CTCTTCATTTGTTTCTGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CCA 72 bp | TCCTCATGGGTCAGAGACTGGAGGTGTTTGTGGTACTaGTCCTGCCTGCTATGTGCTGTCTCAGAAACAAAT | + |
Preference number: 3 (lower is better) Translates to: SSWVRDWRCLWY*SCLLCAVSETN Trigger: ATTTGTTTCTGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR-3UTR CAA 90 bp | ATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCCGTCTTGGGTGTTAAGTaGATCGTGGATGTTGTGAGC | + |
Preference number: 3 (lower is better) Translates to: MHTSVCGTKVAQRRMLDPVLGVK*IVDVVS Trigger: GCTCACAACATCCACGATCAACTTAACACCCAAGAC...GGGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR GCA 72 bp | AATAAAGCAAACACGAGATTGTTGAGGAGGACATGGTaGTGTGTACCTTCAAGGGCAGCCAAGGCTAAGCTA | + |
Preference number: 3 (lower is better) Translates to: NKANTRLLRRTW*CVPSRAAKAKL Trigger: TAGCTTAGCCTTGGCTGCCCTTGAAGGTACACAGCACCATGTCCTCCTCAACAATCTCGTGTTTGCTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 72 bp | CTCACAAACTGTGAAATAAAGCAAACACGAGATTGTTaGGGAGGACATGGTGCTGTGTACCTTCAAGGGCAG | + |
Preference number: 3 (lower is better) Translates to: LTNCEIKQTRDC*GGHGAVYLQGQ Trigger: CTGCCCTTGAAGGTACACAGCACCATGTCCTCCTCAACAATCTCGTGTTTGCTTTATTTCACAGTTTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR GCA 72 bp | TCAGAGACTGGAGGTGTTTGTGGTACTGGTCCTGCCTaGTATGTGCTGTCTCAGAAACAAATGAAGAGTAAA | + |
Preference number: 3 (lower is better) Translates to: SETGGVCGTGPA*YVLSQKQMKSK Trigger: TTTACTCTTCATTTGTTTCTGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 72 bp | AAATGTTGTGTCTTGATTACCAGGGACATCAGGGCCTaGGTAAATGAGCCTCAGTTTCCCTATGTGATGATC | + |
Preference number: 3 (lower is better) Translates to: KCCVLITRDIRA*VNEPQFPYVMI Trigger: GATCATCACATAGGGAAACTGAGGCTCATTTACTCAGGCCCTGATGTCCCTGGTAATCAAGACACAACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CCA 72 bp | ACTCATTTCTTGCATGTATATGCACACTTCTGTATGTaGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCC | + |
Preference number: 3 (lower is better) Translates to: THFLHVYAHFCM*YQSSSEEDAGS Trigger: GGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATATACATGCAAGAAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR TCA 72 bp | ACCCTGTTAAATATGAGTTGTAAGGCTCACAAACTGTaGAATAAAGCAAACACGAGATTGTTGAGGAGGACA | + |
Preference number: 3 (lower is better) Translates to: TLLNMSCKAHKL*NKANTRLLRRT Trigger: TGTCCTCCTCAACAATCTCGTGTTTGCTTTATTTCACAGTTTGTGAGCCTTACAACTCATATTTAACAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR GCA 90 bp | CCAGAGAGAGCCCTTTCCCCGATGTGTGACCCAGCCAGGTCCCCTTCCTACACTCCTCTTGTCGCCCTCTaGGCGCTGCAGCTGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: PERALSPMCDPARSPSYTPLVAL*ALQLPD Trigger: GTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGG...AGTGTAGGAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGGGCTCTCTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR GCA 90 bp | CCAGAGAGAGCCCTTTCCCCGATGTGTGACCCAGCCAGGTCCCCTTCCTACACTACTCTTTCCGCAGGGTaGCAAGCTCAGCTTCCAGAG | + |
Preference number: 4 (lower is better) Translates to: PERALSPMCDPARSPSYTTLSAG*QAQLPE Trigger: CTCTGGAAGCTGAGCTTGGCACCCTGCGGAAAGAGT...AGTGTAGGAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGGGCTCTCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR GCA 90 bp | TATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCCTCGCCGGCTGCCTCTaGTGCGCCTGCGCGTTGCAG | + |
Preference number: 4 (lower is better) Translates to: YAHFCMWYQSSSEEDAGSLAGCL*CACALQ Trigger: CTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAG...GGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CCA 90 bp | TCAGAGACTGGAGGTGTTTGTGGTACTGGTCCTGCCTGCTATGTGCTGTCTCAGCAGACCAGGTTCTCCTaGGCTTGCTCAGCTTCGGCC | + |
Preference number: 4 (lower is better) Translates to: SETGGVCGTGPACYVLSQQTRFS*ACSASA Trigger: GGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTG...CTGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CCA 90 bp | TCAGAGACTGGAGGTGTTTGTGGTACTGGTCCTGCCTGCTATGTGCTGTCTCAGGTTGCTTGGACTCAGTaGCTGTCGCCTCCCAGCGCA | + |
Preference number: 4 (lower is better) Translates to: SETGGVCGTGPACYVLSQVAWTQ*LSPPSA Trigger: TGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAAC...CTGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR TCA 90 bp | ATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCCTGTCTTTGCAGGCCTTaGGCGCAGCCTCCAACTCCC | + |
Preference number: 4 (lower is better) Translates to: MHTSVCGTKVAQRRMLDPCLCRP*AQPPTP Trigger: GGGAGTTGGAGGCTGCGCTCAAGGCCTGCAAAGACA...GGGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR GCA 90 bp | TATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCTCTGCGCGCTGCAGCTaGCAGACCAGGTTCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: YAHFCMWYQSSSEEDAGSSARCS*QTRFSW Trigger: CCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGA...GGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CCA 90 bp | TCCCCCAAGCCTCAGTCCTCATGGGTCAGAGACTGGAGGTGTTTGTGGTACTGGCCTCTGACTTTGGCCTaGTCCATCTCAATCTTCAGG | + |
Preference number: 4 (lower is better) Translates to: SPKPQSSWVRDWRCLWYWPLTLA*SISIFR Trigger: CCTGAAGATTGAGATGGACCAGGCCAAAGTCAGAGG...CCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGACTGAGGCTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 72 bp | TGTGATGATCTAGCACTGGGTGCTCCCGTGGAGAGGTaGGTTGTATCTGTGTGCTGCCACCTAGGCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: CDDLALGAPVER*VVSVCCHLGKS Trigger: AGACTTGCCTAGGTGGCAGCACACAGATACAACCAACCTCTCCACGGGAGCACCCAGTGCTAGATCATCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 72 bp | AAGCCTCAGTCCTCATGGGTCAGAGACTGGAGGTGTTaGTGGTACTGGTCCTGCCTGCTATGTGCTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: KPQSSWVRDWRC*WYWSCLLCAVS Trigger: TGAGACAGCACATAGCAGGCAGGACCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGACTGAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR GCA 90 bp | TATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGCTGGATCCGCCTGCGCGTTGCAGTaGCTCTTCCAGCTGTTGCTT | + |
Preference number: 4 (lower is better) Translates to: YAHFCMWYQSSSEEDAGSACALQ*LFQLLL Trigger: AAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGC...GGATCCAGCATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CCA 90 bp | TTGTTTGACTTGTCAATGATTCTTTTGAGTCCCAGAGAGAGCCCTTTCCCCGATCTGGGGGCCGCACCGTaGCATTCATCTGCTCAGGTT | + |
Preference number: 4 (lower is better) Translates to: LFDLSMILLSPRESPFPDLGAAP*HSSAQV Trigger: AACCTGAGCAGATGAATGCCACGGTGCGGCCCCCAG...ATCGGGGAAAGGGCTCTCTCTGGGACTCAAAAGAATCATTGACAAGTCAAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 72 bp | GTTGGTTGTATCTGTGTGCTGCCACCTAGGCAAGTCTaGGGTGTTAAGTTGATCGTGGATGTTGTGAGCCAC | + |
Preference number: 4 (lower is better) Translates to: VGCICVLPPRQV*GVKLIVDVVSH Trigger: GTGGCTCACAACATCCACGATCAACTTAACACCCAAGACTTGCCTAGGTGGCAGCACACAGATACAACCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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3UTR CAA 72 bp | TTTGCAAGCCTCATTTTCGTGTGCCTCTGTTCTCTGTaGAAATCCCACCTGGAGTTCTGCGTGCTCCAACTG | + |
Preference number: 4 (lower is better) Translates to: FASLIFVCLCSL*KSHLEFCVLQL Trigger: CAGTTGGAGCACGCAGAACTCCAGGTGGGATTTCAACAGAGAACAGAGGCACACGAAAATGAGGCTTGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CCA 90 bp | TGCATGTATATGCACACTTCTGTATGTGGTACCAAAGTAGCTCAGAGGAGGATGAGTGGATCCAGACTTTaGGCGGTGGCTGATGCTAGG | + |
Preference number: 4 (lower is better) Translates to: CMYMHTSVCGTKVAQRRMSGSRL*AVADAR Trigger: CCTAGCATCAGCCACCGCCCAAAGTCTGGATCCACT...CATCCTCCTCTGAGCTACTTTGGTACCACATACAGAAGTGTGCATATACATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 90 bp | TGCCGAGTCTGGGGGCCGCACCGTGGCATTCATCTGCTCAGGTTCTaGACAACGGGGGCTCCGGGCCGTCGAGGCCGCCAGATTCCAGGC | + |
Preference number: 5 (lower is better) Translates to: CRVWGPHRGIHLLRF*TTGAPGRRGRQIPG Trigger: GCCTGGAATCTGGCGGCCTCGACGGCCCGGAGCCCCCGTTGTCCAGAACCTGAGCAGATGAATGCCACGGTGCGGCCCCCAGACTCGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 90 bp | GCCGCAGTTCTTCGACCTCGGGTGCCGAGTCTGGGGGCCGCACCGTaGCATTCATCTGCTCAGGTTCTGGACAACGGGGGCTCCGGGCCG | + |
Preference number: 5 (lower is better) Translates to: AAVLRPRVPSLGAAP*HSSAQVLDNGGSGP Trigger: CGGCCCGGAGCCCCCGTTGTCCAGAACCTGAGCAGATGAATGCCACGGTGCGGCCCCCAGACTCGGCACCCGAGGTCGAAGAACTGCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | TCGCCCTCTGCGCGCTGCAGCTGCCAGACCAGGTTCTCCTGGGCTTaGTCAGCTTCGGCCAGCCGTCGCCGCAGTTCTTCGACCTCGGGT | + |
Preference number: 5 (lower is better) Translates to: SPSARCSCQTRFSWA*SASASRRRSSSTSG Trigger: ACCCGAGGTCGAAGAACTGCGGCGACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | AGCGCAGCCTCCAACTCCCTCTTGTCGCCCTCTGCGCGCTGCAGCTaGCAGACCAGGTTCTCCTGGGCTTGCTCAGCTTCGGCCAGCCGT | + |
Preference number: 5 (lower is better) Translates to: SAASNSLLSPSARCS*QTRFSWACSASASR Trigger: ACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | GCCTTGAGCGCAGCCTCCAACTCCCTCTTGTCGCCCTCTGCGCGCTaGAGCTGCCAGACCAGGTTCTCCTGGGCTTGCTCAGCTTCGGCC | + |
Preference number: 5 (lower is better) Translates to: ALSAASNSLLSPSAR*SCQTRFSWACSASA Trigger: GGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGCGCTCAAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | CAGCGCCACCTCGCGGCTAACACAAGCCTCGCCGGCTGCCTCTGCTaGGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTTGGACTC | + |
Preference number: 5 (lower is better) Translates to: QRHLAANTSLAGCLC*ACALQCLFQLLLGL Trigger: GAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTGTGTTAGCCGCGAGGTGGCGCTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 90 bp | CTCTTGTCGCCCTCTGCGCGCTGCAGCTGCCAGACCAGGTTCTCCTaGGCTTGCTCAGCTTCGGCCAGCCGTCGCCGCAGTTCTTCGACC | + |
Preference number: 5 (lower is better) Translates to: LLSPSARCSCQTRFS*ACSASASRRRSSST Trigger: GGTCGAAGAACTGCGGCGACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | TTTGCAGGCCTTGAGCGCAGCCTCCAACTCCCTCTTGTCGCCCTCTaGGCGCTGCAGCTGCCAGACCAGGTTCTCCTGGGCTTGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: FAGLERSLQLPLVAL*ALQLPDQVLLGLLS Trigger: GCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGCGCTCAAGGCCTGCAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | GCTGCCTCTGCTGCGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTaGTTGGACTCAGTGGCTGTCGCCTCCCAGCGCACCAAGGCTTCT | + |
Preference number: 5 (lower is better) Translates to: AASAAPARCSASSSC*LDSVAVASQRTKAS Trigger: AGAAGCCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 90 bp | AACACAAGCCTCGCCGGCTGCCTCTGCTGCGCCTGCGCGTTGCAGTaGCTCTTCCAGCTGTTGCTTGGACTCAGTGGCTGTCGCCTCCCA | + |
Preference number: 5 (lower is better) Translates to: NTSLAGCLCCACALQ*LFQLLLGLSGCRLP Trigger: TGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTGTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 90 bp | CCTCTGCTGCGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTTaGACTCAGTGGCTGTCGCCTCCCAGCGCACCAAGGCTTCTGTCA | + |
Preference number: 5 (lower is better) Translates to: PLLRLRVAVPLPAVA*TQWLSPPSAPRLLS Trigger: TGACAGAAGCCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS TCA 90 bp | CCTTTAGTTGGGTCTGAAGCCGACTCTGGCTGTCTTTGCAGGCCTTaGGCGCAGCCTCCAACTCCCTCTTGTCGCCCTCTGCGCGCTGCA | + |
Preference number: 5 (lower is better) Translates to: PLVGSEADSGCLCRP*AQPPTPSCRPLRAA Trigger: TGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGCGCTCAAGGCCTGCAAAGACAGCCAGAGTCGGCTTCAGACCCAACTAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 90 bp | CGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTTGGACTCAGTaGCTGTCGCCTCCCAGCGCACCAAGGCTTCTGTCAGCATTCCAT | + |
Preference number: 5 (lower is better) Translates to: RLRVAVPLPAVAWTQ*LSPPSAPRLLSAFH Trigger: ATGGAATGCTGACAGAAGCCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CAA 90 bp | ACTGGGTGCTCCCGTGGAGAGGTTGGTTGTATCTGTGTGCTGCCACCTAGGCAACAGGTTCTCCTGGGCTaGCTCAGCTTCGGCCAGCCG | + |
Preference number: 5 (lower is better) Translates to: TGCSRGEVGCICVLPPRQQVLLG*LSFGQP Trigger: CGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTG...TTGCCTAGGTGGCAGCACACAGATACAACCAACCTCTCCACGGGAGCACCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CAA 90 bp | CCAGAGAGAGCCCTTTCCCCGATGTGTGACCCAGCCAGGTCCCCTTCCTACACTTGCCTCTTCCAGCTGTaGCTTGGACTCAGTGGCTGT | + |
Preference number: 5 (lower is better) Translates to: PERALSPMCDPARSPSYTCLFQL*LGLSGC Trigger: ACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCA...AGTGTAGGAAGGGGACCTGGCTGGGTCACACATCGGGGAAAGGGCTCTCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS TCA 90 bp | ACTTTGGCCTGGTCCATCTCAATCTTCAGGGCCTTTAGTTGGGTCTaGAGCCGACTCTGGCTGTCTTTGCAGGCCTTGAGCGCAGCCTCC | + |
Preference number: 5 (lower is better) Translates to: TLAWSISIFRAFSWV*SRLWLSLQALSAAS Trigger: GGAGGCTGCGCTCAAGGCCTGCAAAGACAGCCAGAGTCGGCTTCAGACCCAACTAAAGGCCCTGAAGATTGAGATGGACCAGGCCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CAA 90 bp | TCCCCCAAGCCTCAGTCCTCATGGGTCAGAGACTGGAGGTGTTTGTGGTACTGGTGCGTGCCTCTGACTTaGGCCTGGTCCATCTCAATC | + |
Preference number: 5 (lower is better) Translates to: SPKPQSSWVRDWRCLWYWCVPLT*AWSISI Trigger: GATTGAGATGGACCAGGCCAAAGTCAGAGGCACGCA...CCAGTACCACAAACACCTCCAGTCTCTGACCCATGAGGACTGAGGCTTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS TCA 90 bp | AGGCTTCTGTCAGCATTCCATTCTCCAGCCCCATCTGCGTGCCTCTaGCTTTGGCCTGGTCCATCTCAATCTTCAGGGCCTTTAGTTGGG | + |
Preference number: 5 (lower is better) Translates to: RLLSAFHSPAPSACL*LWPGPSQSSGPLVG Trigger: CCCAACTAAAGGCCCTGAAGATTGAGATGGACCAGGCCAAAGTCAGAGGCACGCAGATGGGGCTGGAGAATGGAATGCTGACAGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CAA 90 bp | GATGCTGGATCCCCTGGGACCAGAGTTTCCCATGTTTGTGATGTGGTTGTGAAACTGTCTTTGCAGGCCTaGAGCGCAGCCTCCAACTCC | + |
Preference number: 5 (lower is better) Translates to: DAGSPGTRVSHVCDVVVKLSLQA*SAASNS Trigger: GGAGTTGGAGGCTGCGCTCAAGGCCTGCAAAGACAG...TTTCACAACCACATCACAAACATGGGAAACTCTGGTCCCAGGGGATCCAGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS-3UTR CAA 90 bp | TTGTTTGACTTGTCAATGATTCTTTTGAGTCCCAGAGAGAGCCCTTTCCCCGATTCTTCCAGCTGTTGCTaGGACTCAGTGGCTGTCGCC | + |
Preference number: 5 (lower is better) Translates to: LFDLSMILLSPRESPFPDSSSCC*DSVAVA Trigger: GGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGA...ATCGGGGAAAGGGCTCTCTCTGGGACTCAAAAGAATCATTGACAAGTCAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 72 bp | CCCTCTGCGCGCTGCAGCTGCCAGACCAGGTTCTCCTaGGCTTGCTCAGCTTCGGCCAGCCGTCGCCGCAGT | + |
Preference number: 6 (lower is better) Translates to: PSARCSCQTRFS*ACSASASRRRS Trigger: ACTGCGGCGACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | GCGCGCTGCAGCTGCCAGACCAGGTTCTCCTGGGCTTaGTCAGCTTCGGCCAGCCGTCGCCGCAGTTCTTCG | + |
Preference number: 6 (lower is better) Translates to: ARCSCQTRFSWA*SASASRRRSSS Trigger: CGAAGAACTGCGGCGACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | CTCGCGGCTAACACAAGCCTCGCCGGCTGCCTCTGCTaGGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: LAANTSLAGCLC*ACALQCLFQLL Trigger: CAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTGTGTTAGCCGCGAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 72 bp | CTTCGACCTCGGGTGCCGAGTCTGGGGGCCGCACCGTaGCATTCATCTGCTCAGGTTCTGGACAACGGGGGC | + |
Preference number: 6 (lower is better) Translates to: LRPRVPSLGAAP*HSSAQVLDNGG Trigger: GCCCCCGTTGTCCAGAACCTGAGCAGATGAATGCCACGGTGCGGCCCCCAGACTCGGCACCCGAGGTCGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | TGCGCGCTGCAGCTGCCAGACCAGGTTCTCCTGGGCTaGCTCAGCTTCGGCCAGCCGTCGCCGCAGTTCTTC | + |
Preference number: 6 (lower is better) Translates to: CALQLPDQVLLG*LSFGQPSPQFF Trigger: GAAGAACTGCGGCGACGGCTGGCCGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | GCAGCCTCCAACTCCCTCTTGTCGCCCTCTGCGCGCTaGAGCTGCCAGACCAGGTTCTCCTGGGCTTGCTCA | + |
Preference number: 6 (lower is better) Translates to: AASNSLLSPSAR*SCQTRFSWACS Trigger: TGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | CAAGCCTCGCCGGCTGCCTCTGCTGCGCCTGCGCGTTaGAGTGCCTCTTCCAGCTGTTGCTTGGACTCAGTG | + |
Preference number: 6 (lower is better) Translates to: QASPAASAAPAR*SASSSCCLDSV Trigger: CACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 72 bp | CGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTTaGACTCAGTGGCTGTCGCCTCCCAGCGCACCAAGG | + |
Preference number: 6 (lower is better) Translates to: RLRVAVPLPAVA*TQWLSPPSAPR Trigger: CCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | TCTTTGCAGGCCTTGAGCGCAGCCTCCAACTCCCTCTaGTCGCCCTCTGCGCGCTGCAGCTGCCAGACCAGG | + |
Preference number: 6 (lower is better) Translates to: SLQALSAASNSL*SPSARCSCQTR Trigger: CCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGAGGCTGCGCTCAAGGCCTGCAAAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | GCGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTaGGACTCAGTGGCTGTCGCCTCCCAGCGCACCAAG | + |
Preference number: 6 (lower is better) Translates to: APARCSASSSCC*DSVAVASQRTK Trigger: CTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 90 bp | GCCTCTGCTGCGCCTGCGCGTTGCAGTGCCTCTTCCAGCTGTTGCTaGGACTCAGTGGCTGTCGCCTCCCAGCGCACCAAGGCTTCTGTC | + |
Preference number: 6 (lower is better) Translates to: ASAAPARCSASSSCC*DSVAVASQRTKASV Trigger: GACAGAAGCCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | TCCAACTCCCTCTTGTCGCCCTCTGCGCGCTGCAGCTaGCAGACCAGGTTCTCCTGGGCTTGCTCAGCTTCG | + |
Preference number: 6 (lower is better) Translates to: SNSLLSPSARCS*QTRFSWACSAS Trigger: CGAAGCTGAGCAAGCCCAGGAGAACCTGGTCTGGCAGCTGCAGCGCGCAGAGGGCGACAAGAGGGAGTTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS GCA 72 bp | GCTAACACAAGCCTCGCCGGCTGCCTCTGCTGCGCCTaGGCGTTGCAGTGCCTCTTCCAGCTGTTGCTTGGA | + |
Preference number: 6 (lower is better) Translates to: ANTSLAGCLCCA*ALQCLFQLLLG Trigger: TCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTGTGTTAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | ACAAGCCTCGCCGGCTGCCTCTGCTGCGCCTGCGCGTaGCAGTGCCTCTTCCAGCTGTTGCTTGGACTCAGT | + |
Preference number: 6 (lower is better) Translates to: TSLAGCLCCACA*QCLFQLLLGLS Trigger: ACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAACGCGCAGGCGCAGCAGAGGCAGCCGGCGAGGCTTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | GTGGATCCAGACTTTGGGCGGTGGCTGATGCTAGGCTaGGTCCTAGATCCAGAGCGGGGTCGGAGGCGCGAC | + |
Preference number: 6 (lower is better) Translates to: VDPDFGRWLMLG*VLDPERGRRRD Trigger: GTCGCGCCTCCGACCCCGCTCTGGATCTAGGACCAAGCCTAGCATCAGCCACCGCCCAAAGTCTGGATCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CCA 72 bp | GTTGCAGTGCCTCTTCCAGCTGTTGCTTGGACTCAGTaGCTGTCGCCTCCCAGCGCACCAAGGCTTCTGTCA | + |
Preference number: 6 (lower is better) Translates to: VAVPLPAVAWTQ*LSPPSAPRLLS Trigger: TGACAGAAGCCTTGGTGCGCTGGGAGGCGACAGCCACTGAGTCCAAGCAACAGCTGGAAGAGGCACTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS TCA 72 bp | TGGTCCATCTCAATCTTCAGGGCCTTTAGTTGGGTCTaGAGCCGACTCTGGCTGTCTTTGCAGGCCTTGAGC | + |
Preference number: 6 (lower is better) Translates to: WSISIFRAFSWV*SRLWLSLQALS Trigger: GCTCAAGGCCTGCAAAGACAGCCAGAGTCGGCTTCAGACCCAACTAAAGGCCCTGAAGATTGAGATGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |
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CDS CAA 72 bp | ATTCCATTCTCCAGCCCCATCTGCGTGCCTCTGACTTaGGCCTGGTCCATCTCAATCTTCAGGGCCTTTAGT | + |
Preference number: 6 (lower is better) Translates to: IPFSSPICVPLT*AWSISIFRAFS Trigger: ACTAAAGGCCCTGAAGATTGAGATGGACCAGGCCAAAGTCAGAGGCACGCAGATGGGGCTGGAGAATGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207913.2 |