Pregenerated sensors for CCDC190 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070532Ensembl transcript IDs: ENSMUST00000094348.4, ENSMUST00000175731.3
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCATTTGACCAGCAGGTaGCACTCTAAGCATCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RSPYVISVEFPCNTLPTPHLTSR*HSKHRR Trigger: TCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| 3UTR-3UTR GCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACCTTATTTTGCATTTCTaGTTGTTTCTGTGCGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: HLTSRWHSKHRRASDKQDLILHF*LFLCVA Trigger: AGCAACGCACAGAAACAAGCAGAAATGCAAAATAAG...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| 3UTR CAA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTaGAAGGGTCTCGTTTCCATAGTGATTACAGAATATCTTCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: YFAFLLVSVRCYGSY*KGLVSIVITEYLLV Trigger: GACCAGAAGATATTCTGTAATCACTATGGAAACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| 3UTR CAA 90 bp | GTTGCAAAAGAAAGCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTaGCTACGGCAGCTATTTGAAGGGTCTCGTTTCCATAGTGATTAC | + |
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Preference number: 2 (lower is better) Translates to: VAKESLFCISACFCA*LRQLFEGSRFHSDY Trigger: GTAATCACTATGGAAACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGCTTTCTTTTGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| 3UTR TCA 72 bp | TTATCTGGAGACCAGGTCACCGTACGTGATTTCAGTTaGGTTCCCATGCAACACCCTCCCCACCCCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LSGDQVTVRDFS*VPMQHPPHPSH Trigger: GTGGGAGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCTGGTCTCCAGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | CCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCCCACCGACAGCTCTTGGTCATaGCATGGGACAGAGACATCC | + |
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Preference number: 4 (lower is better) Translates to: PYVISVEFPCNTLPTPPTDSSWS*HGTETS Trigger: GGATGTCTCTGTCCCATGTCATGACCAAGAGCTGTC...GGTGGGAGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR GCA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTGGACAGAGACATCCTTaGTGGGGTCCACGCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSPYVISVEFPCNTLPTPGQRHP*WGPRPS Trigger: TGAAGGGCGTGGACCCCAGCAAGGATGTCTCTGTCC...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR CCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACGTGGGCTCTCCCTCCTaGCCTTGTGGGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLTSRWHSKHRRASDKQDVGSPS*PCGLPS Trigger: AGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCAC...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCTCATTAGCAGGTGCTaGCCCTCTCTCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPYVISVEFPCNTLPTPLISRC*PSLTIL Trigger: CAAGATGGTGAGAGAGGGTCAGCACCTGCTAATGAG...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR GCA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTGCTGAGTCTGGCTTCTaGTTGCCTGGCACTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPYVISVEFPCNTLPTPAESGF*LPGTLS Trigger: AGAAAGAGTGCCAGGCAAGCAGAAGCCAGACTCAGC...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | CCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCCCACCTTGTGCGTTCATCTTTaGAGCTTCCTGCATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYVISVEFPCNTLPTPPTLCVHL*SFLHSP Trigger: TGGACTATGCAGGAAGCTTCAAAGATGAACGCACAA...GGTGGGAGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTTCTCCACGTGGCTTTTaGCTGGCATTTTCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPYVISVEFPCNTLPTPSPRGF*LAFSDL Trigger: CAGATCTGAAAATGCCAGTCAAAAGCCACGTGGAGA...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR GCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTGGACAGAGACATCCTTaGTGGGGTCCACGCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVGQRHP*WGPRPS Trigger: TGAAGGGCGTGGACCCCAGCAAGGATGTCTCTGTCC...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACTCCCTCCTGGCCTTGTaGGCTTCCTTCTTTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTSRWHSKHRRASDKQDSLLAL*ASFFEA Trigger: TGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGA...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACCCCTGTTCTGGGGAGTaGGTAGTGTTTGTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLTSRWHSKHRRASDKQDPCSGE*VVFVSK Trigger: TTTGGACACAAACACTACTCACTCCCCAGAACAGGG...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR CCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACTGGCTTCTGCTTGCCTaGCACTCTTTCTCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: HLTSRWHSKHRRASDKQDWLLLA*HSFSPS Trigger: ACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCA...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTGTGGGCTTCCTTCTTTaGAGCAGCTGGTTCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVVGFLL*SSWFSH Trigger: GTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCAC...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACGATAGAAGGTGCTCTTaGCTTCTCAGGGTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLTSRWHSKHRRASDKQDDRRCS*LLRVSL Trigger: CAAAGACACCCTGAGAAGCCAAGAGCACCTTCTATC...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR CCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTGTGGGCTCTCCCTCCTaGCCTTGTGGGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGVGSPS*PCGLPS Trigger: AGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCAC...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCCCTGTTCTGGGGAGTaGGTAGTGTTTGTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVPCSGE*VVFVSK Trigger: TTTGGACACAAACACTACTCACTCCCCAGAACAGGG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCTTCTGTCTTGTTGGTaGACAGCTCTTGGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVLLSCW*TALGHD Trigger: GTCATGACCAAGAGCTGTCCACCAACAAGACAGAAG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | TTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACTTTCACGTGGCTTTTGACTaGCATTTTCAGATCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LTSRWHSKHRRASDKQDFHVAFD*HFQIWS Trigger: AGACCAGATCTGAAAATGCCAGTCAAAAGCCACGTG...AAAGTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGACAGCTCTTGGTCATaGCATGGGACAGAGACATCC | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKDSSWS*HGTETS Trigger: GGATGTCTCTGTCCCATGTCATGACCAAGAGCTGTC...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGCTCATTAGCAGGTGCTaGCCCTCTCTCACCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKLISRC*PSLTIL Trigger: CAAGATGGTGAGAGAGGGTCAGCACCTGCTAATGAG...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTTTGTGCGTTCATCTTTaGAGCTTCCTGCATAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVLCVHL*SFLHSP Trigger: TGGACTATGCAGGAAGCTTCAAAGATGAACGCACAA...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR GCA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCTCTCCAAGTCAAACTaGTTATACAGAGGTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVLSKSN*LYRGPF Trigger: GAAGGGACCTCTGTATAAGCAGTTTGACTTGGAGAG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR GCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTAGTCTGGCTTCTGCTTaGCTGGCACTCTTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGSLASA*LALFLS Trigger: GGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACT...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR GCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGAGTCTGGCTTCTGCTTaGCTGGCACTCTTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKSLASA*LALFLS Trigger: GGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACT...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCTTCTCAGGGTGTCTTTaGGGACAGGGTCATGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: VFSLSFLFIVALFIRRKTFSGCL*GQGHVK Trigger: CTTTACATGACCCTGTCCTCAAAGACACCCTGAGAA...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR GCA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCATGATCTCCAGCCTTTaGAGTCTAAGGCTGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLSFLFIVALFIRRKTMISSL*SLRLSL Trigger: CAGACTCAGCCTTAGACTGCAAAGGCTGGAGATCAT...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR CCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGTGGCTTCTGCTTGCCTaGCACTCTTTCTCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKWLLLA*HSFSPS Trigger: ACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCA...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | AAGCATCGCAGAGCTTCGGACAAACAAGACTTTCTTCTTCAAAATAAGCCCAGGCTTCTGTCTTGTTGGTaGACAGCTCTTGGTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: KHRRASDKQDFLLQNKPRLLSCW*TALGHD Trigger: GTCATGACCAAGAGCTGTCCACCAACAAGACAGAAG...CCTGGGCTTATTTTGAAGAAGAAAGTCTTGTTTGTCCGAAGCTCTGCGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTTTCTCAGGGTGTCTTTaGGGACAGGGTCATGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGFSGCL*GQGHVK Trigger: CTTTACATGACCCTGTCCTCAAAGACACCCTGAGAA...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGTCTCCACGTGGCTTTTaGCTGGCATTTTCAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKSPRGF*LAFSDL Trigger: CAGATCTGAAAATGCCAGTCAAAAGCCACGTGGAGA...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR GCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTATGATCTCCAGCCTTTaGAGTCTAAGGCTGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGMISSL*SLRLSL Trigger: CAGACTCAGCCTTAGACTGCAAAGGCTGGAGATCAT...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR GCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTTTTCTTGATGATATCTaGTTGCTGCAGGCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGFLDDI*LLQALQ Trigger: CTGCAGCGCCTGCAGCAAGCAGATATCATCAAGAAA...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGATAGAAGGTGCTCTTaGCTTCTCAGGGTGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKDRRCS*LLRVSL Trigger: CAAAGACACCCTGAGAAGCCAAGAGCACCTTCTATC...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGCTCTTGGTCATGACATaGGACAGAGACATCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKLLVMT*DRDILA Trigger: AGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAG...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR TCA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCTTGGTGGCAAGAATGTaGCAACATCTTTCGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: VFSLSFLFIVALFIRRKTLVARM*QHLSIS Trigger: AGAGATCGAAAGATGTTGTCACATTCTTGCCACCAA...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR GCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGCTCTCCAAGTCAAACTaGTTATACAGAGGTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKLSKSN*LYRGPF Trigger: GAAGGGACCTCTGTATAAGCAGTTTGACTTGGAGAG...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGCACGTGGCTTTTGACTaGCATTTTCAGATCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKHVAFD*HFQIWS Trigger: AGACCAGATCTGAAAATGCCAGTCAAAAGCCACGTG...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTATCAGCATCTCCACGTaGCTTTTGACTGGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGISIST*LLTGIF Trigger: GAAAATGCCAGTCAAAAGCCACGTGGAGATGCTGAT...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS-3UTR CCA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCCATAGTGAGCATTCTTaGCCTTTTCGAACAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VFSLSFLFIVALFIRRKTHSEHS*PFRTAL Trigger: TAGAGCTGTTCGAAAAGGCCAAGAATGCTCACTATG...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| 3UTR CAA 72 bp | ATAGTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTaGTTTATTAGGAGGAAGACCAAACAAAAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IVFSLSFLFIVA*FIRRKTKQKGR Trigger: CCTGCCCTTTTGTTTGGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS-3UTR TCA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGTTGGTGGCAAGAATGTaGCAACATCTTTCGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKLVARM*QHLSIS Trigger: AGAGATCGAAAGATGTTGTCACATTCTTGCCACCAA...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CCA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCATAGTGAGCATTCTTaGCCTTTTCGAACAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGHSEHS*PFRTAL Trigger: TAGAGCTGTTCGAAAAGGCCAAGAATGCTCACTATG...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 90 bp | TTGCTGGGGTCCACGCCCTTCAGTGGATTCGTGGGCTCTCCCTCCTaGCCTTGTGGGCTTCCTTCTTTGAAGCAGCTGGTTCTCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGSTPFSGFVGSPS*PCGLPSLKQLVLSP Trigger: CGGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCACGAATCCACTGAAGGGCGTGGACCCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCACCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCCCTCTCTCACCATCTaGGCTGGACACGCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSPYVISVEFPCNTLPTPPSLTI*AGHATV Trigger: GACAGTGGCGTGTCCAGCCAAGATGGTGAGAGAGGG...AGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGGTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS TCA 90 bp | GTGGATTCGTGGGCTCTCCCTCCTGGCCTTGTGGGCTTCCTTCTTTaGAGCAGCTGGTTCTCTCACCGTGAGATAGAAGGTGCTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VDSWALPPGLVGFLL*SSWFSHREIEGALG Trigger: GCCAAGAGCACCTTCTATCTCACGGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCACGAATCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | CCGTACGTGATTTCAGTTGAGTTCCCATGCAACACCCTCCCCACCCCTCCCACCTGTGGGCTTCCTTCTTaGAAGCAGCTGGTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PYVISVEFPCNTLPTPPTCGLPS*KQLVLS Trigger: TGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACA...GGTGGGAGGGGTGGGGAGGGTGTTGCATGGGAACTCAACTGAAATCACGTACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS CCA 90 bp | TCAGATCTGGTCTCATTAGCAGGTGCTGACCCTCTCTCACCATCTTaGCTGGACACGCCACTGTCTTCTGTCTTGTTGGTGGACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDLVSLAGADPLSPS*LDTPLSSVLLVDSS Trigger: AGAGCTGTCCACCAACAAGACAGAAGACAGTGGCGTGTCCAGCCAAGATGGTGAGAGAGGGTCAGCACCTGCTAATGAGACCAGATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCCCTCTCTCACCATCTaGGCTGGACACGCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVPSLTI*AGHATV Trigger: GACAGTGGCGTGTCCAGCCAAGATGGTGAGAGAGGG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 90 bp | TGGCCTTGTGGGCTTCCTTCTTTGAAGCAGCTGGTTCTCTCACCGTaGGATAGAAGGTGCTCTTGGCTTCTCAGGGTGTCTTTGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WPCGLPSLKQLVLSP*DRRCSWLLRVSLRT Trigger: TGTCCTCAAAGACACCCTGAGAAGCCAAGAGCACCTTCTATCTCACGGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 90 bp | TGGCTTTTGACTGGCATTTTCAGATCTGGTCTCATTAGCAGGTGCTaGCCCTCTCTCACCATCTTGGCTGGACACGCCACTGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLLTGIFRSGLISRC*PSLTILAGHATVFC Trigger: ACAGAAGACAGTGGCGTGTCCAGCCAAGATGGTGAGAGAGGGTCAGCACCTGCTAATGAGACCAGATCTGAAAATGCCAGTCAAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 90 bp | GCAGATGATCTCCAGCCTTTGCAGTCTAAGGCTGAGTCTGGCTTCTaGTTGCCTGGCACTCTTTCTCTCCAAGTCAAACTGCTTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: ADDLQPLQSKAESGF*LPGTLSLQVKLLIQ Trigger: CTGTATAAGCAGTTTGACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACTCAGCCTTAGACTGCAAAGGCTGGAGATCATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACTTTCTTGATGATATCTaGCTGCAGGCGCTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLTSRWHSKHRRASDKQDFLDDI*LQALQF Trigger: GAACTGCAGCGCCTGCAGCAAGATATCATCAAGAAA...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS-3UTR CAA 90 bp | CATTTGACCAGCAGGTGGCACTCTAAGCATCGCAGAGCTTCGGACAAACAAGACCTTCTCAGGGTGTCTTaGAGGACAGGGTCATGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLTSRWHSKHRRASDKQDLLRVS*RTGSCK Trigger: TTTACATGACCCTGTCCTCAAAGACACCCTGAGAAG...GTCTTGTTTGTCCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCCACTGTCTTCTGTCTaGTTGGTGGACAGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVPLSSV*LVDSSW Trigger: CCAAGAGCTGTCCACCAACAAGACAGAAGACAGTGG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCTTGATGATATCTGCTaGCTGCAGGCGCTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVLDDIC*LQALQF Trigger: GAACTGCAGCGCCTGCAGCAAGCAGATATCATCAAG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTTGTGGGCTTCCTTCTTaGAAGCAGCTGGTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVCGLPS*KQLVLS Trigger: TGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACA...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCCTCTCCCTCCTGGCCTaGTGGGCTTCCTTCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFSLSFLFIVALFIRRKTLSLLA*WASFFE Trigger: TTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAG...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTCTGTCTTCTGTCTTGTaGGTGGACAGCTCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVLSSVL*VDSSWS Trigger: TGACCAAGAGCTGTCCACCAACAAGACAGAAGACAG...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGCTCTCCCTCCTGGCCTaGTGGGCTTCCTTCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKLSLLA*WASFFE Trigger: TTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAG...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | TATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCCACTGTCTTCTGTCTaGTTGGTGGACAGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YFAFLLVSVRCYGSYLKGPLSSV*LVDSSW Trigger: CCAAGAGCTGTCCACCAACAAGACAGAAGACAGTGG...ACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGAGCTGGGGGAATTTaGTACATCAGCATCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKGAGGI*YISIST Trigger: CGTGGAGATGCTGATGTACAAAATTCCCCCAGCTCC...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 90 bp | GTAACACTGTTTTTCAGTGTTCTAATTTTAGGCTCCGGGACTGCGTaGCTCTGTCCTGTTGGTGGCAAGAATGTGACAACATCTTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTLFFSVLILGSGTA*LCPVGGKNVTTSFD Trigger: ATCGAAAGATGTTGTCACATTCTTGCCACCAACAGGACAGAGGCACGCAGTCCCGGAGCCTAAAATTAGAACACTGAAAAACAGTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 90 bp | TTGGGTAACACTGTTTTTCAGTGTTCTAATTTTAGGCTCCGGGACTaGGTGCCTCTGTCCTGTTGGTGGCAAGAATGTGACAACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGNTVFQCSNFRLRD*VPLSCWWQECDNIF Trigger: AAAGATGTTGTCACATTCTTGCCACCAACAGGACAGAGGCACGCAGTCCCGGAGCCTAAAATTAGAACACTGAAAAACAGTGTTACCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 90 bp | AATTTCATGCCCCACATAAGAAGAGAACCTTTTCTTGATGATATCTaGTTGCTGCAGGCGCTGCAGTTCTTTCTGAAGCTGTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NFMPHIRREPFLDDI*LLQALQFFLKLSLL Trigger: GAGCAGAGACAGCTTCAGAAAGAACTGCAGCGCCTGCAGCAAGCAGATATCATCAAGAAAAGGTTCTCTTCTTATGTGGGGCATGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | AAGCATCGCAGAGCTTCGGACAAACAAGACTTTCTTCTTCAAAATAAGCCCAGGATCTCCACGTGGCTTTaGACTGGCATTTTCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: KHRRASDKQDFLLQNKPRISTWL*TGIFRS Trigger: AGATCTGAAAATGCCAGTCAAAAGCCACGTGGAGAT...CCTGGGCTTATTTTGAAGAAGAAAGTCTTGTTTGTCCGAAGCTCTGCGATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS-3UTR CAA 90 bp | GCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGGTCTCGTTATCTTTCGATCTCTTTaGAATTTCATGCCCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: AFLLVSVRCYGSYLKGLVIFRSL*NFMPHI Trigger: TATGTGGGGCATGAAATTCAAAAGAGATCGAAAGAT...AACGAGACCCTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGATCTCCACGTGGCTTTaGACTGGCATTTTCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKISTWL*TGIFRS Trigger: AGATCTGAAAATGCCAGTCAAAAGCCACGTGGAGAT...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATTTTGCATTTCTGCTTGTTTCTGTGCGTTGCTACGGCAGCTATTTGAAGGAAGAGAACCTTTTCTaGATGATATCTTGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AYFAFLLVSVRCYGSYLKEENLF*MISCCR Trigger: CCTGCAGCAAGATATCATCAAGAAAAGGTTCTCTTC...CTTCAAATAGCTGCCGTAGCAACGCACAGAAACAAGCAGAAATGCAAAATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCCCTCTCCTTCCTCTTCATAGTGGCCTTGTTTATTAGGAGGAAGACCATCTTTCGATCTCTTTaGAATTTCATGCCCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: VFSLSFLFIVALFIRRKTIFRSL*NFMPHI Trigger: TATGTGGGGCATGAAATTCAAAAGAGATCGAAAGAT...GGTCTTCCTCCTAATAAACAAGGCCACTATGAAGAGGAAGGAGAGGGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
||
| CDS CCA 72 bp | TCCACGCCCTTCAGTGGATTCGTGGGCTCTCCCTCCTaGCCTTGTGGGCTTCCTTCTTTGAAGCAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: STPFSGFVGSPS*PCGLPSLKQLV Trigger: AACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCACGAATCCACTGAAGGGCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 72 bp | GCTCTTGGTCATGACATGGGACAGAGACATCCTTGCTaGGGTCCACGCCCTTCAGTGGATTCGTGGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALGHDMGQRHPC*GPRPSVDSWAL Trigger: GAGAGCCCACGAATCCACTGAAGGGCGTGGACCCCAGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CAA 72 bp | GCCCTTCAGTGGATTCGTGGGCTCTCCCTCCTGGCCTaGTGGGCTTCCTTCTTTGAAGCAGCTGGTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQWIRGLSLLA*WASFFEAAGSL Trigger: GAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCACGAATCCACTGAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 72 bp | ACAGCTCTTGGTCATGACATGGGACAGAGACATCCTTaGTGGGGTCCACGCCCTTCAGTGGATTCGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TALGHDMGQRHP*WGPRPSVDSWA Trigger: AGCCCACGAATCCACTGAAGGGCGTGGACCCCAGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 72 bp | CTTCAGTGGATTCGTGGGCTCTCCCTCCTGGCCTTGTaGGCTTCCTTCTTTGAAGCAGCTGGTTCTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LQWIRGLSLLAL*ASFFEAAGSLT Trigger: GGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCACGAATCCACTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 72 bp | TGGGCTCTCCCTCCTGGCCTTGTGGGCTTCCTTCTTTaGAGCAGCTGGTTCTCTCACCGTGAGATAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WALPPGLVGFLL*SSWFSHREIEG Trigger: ACCTTCTATCTCACGGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCCACAAGGCCAGGAGGGAGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 72 bp | CTGTCTTCTGTCTTGTTGGTGGACAGCTCTTGGTCATaGCATGGGACAGAGACATCCTTGCTGGGGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LSSVLLVDSSWS*HGTETSLLGST Trigger: CGTGGACCCCAGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAGCTGTCCACCAACAAGACAGAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 72 bp | TTCTGTCTTGTTGGTGGACAGCTCTTGGTCATGACATaGGACAGAGACATCCTTGCTGGGGTCCACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FCLVGGQLLVMT*DRDILAGVHAL Trigger: AAGGGCGTGGACCCCAGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAGCTGTCCACCAACAAGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CAA 72 bp | CACGCCACTGTCTTCTGTCTTGTTGGTGGACAGCTCTaGGTCATGACATGGGACAGAGACATCCTTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HATVFCLVGGQL*VMTWDRDILAG Trigger: CCCAGCAAGGATGTCTCTGTCCCATGTCATGACCAAGAGCTGTCCACCAACAAGACAGAAGACAGTGGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 72 bp | GGGCTTCCTTCTTTGAAGCAGCTGGTTCTCTCACCGTaGGATAGAAGGTGCTCTTGGCTTCTCAGGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPSLKQLVLSP*DRRCSWLLRVS Trigger: AGACACCCTGAGAAGCCAAGAGCACCTTCTATCTCACGGTGAGAGAACCAGCTGCTTCAAAGAAGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS GCA 72 bp | CTCCAGCCTTTGCAGTCTAAGGCTGAGTCTGGCTTCTaGTTGCCTGGCACTCTTTCTCTCCAAGTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPLQSKAESGF*LPGTLSLQVKL Trigger: CAGTTTGACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACTCAGCCTTAGACTGCAAAGGCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 72 bp | CTTGGCTGGACACGCCACTGTCTTCTGTCTTGTTGGTaGACAGCTCTTGGTCATGACATGGGACAGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: LGWTRHCLLSCW*TALGHDMGQRH Trigger: ATGTCTCTGTCCCATGTCATGACCAAGAGCTGTCCACCAACAAGACAGAAGACAGTGGCGTGTCCAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CCA 72 bp | CATCTTGGCTGGACACGCCACTGTCTTCTGTCTTGTTaGTGGACAGCTCTTGGTCATGACATGGGACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HLGWTRHCLLSC*WTALGHDMGQR Trigger: TCTCTGTCCCATGTCATGACCAAGAGCTGTCCACCAACAAGACAGAAGACAGTGGCGTGTCCAGCCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS TCA 72 bp | ACAGCTCTAGGAAGGATGGCTTTGTGCGTTCATCTTTaGAGCTTCCTGCATAGTCCACGGAGCTGGGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TALGRMALCVHL*SFLHSPRSWGN Trigger: ATTCCCCCAGCTCCGTGGACTATGCAGGAAGCTTCAAAGATGAACGCACAAAGCCATCCTTCCTAGAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CAA 72 bp | CAGCCTTTGCAGTCTAAGGCTGAGTCTGGCTTCTGCTaGCCTGGCACTCTTTCTCTCCAAGTCAAACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPLQSKAESGFC*PGTLSLQVKLL Trigger: AAGCAGTTTGACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACTCAGCCTTAGACTGCAAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CAA 72 bp | CGATTTCACGTGATAGAGGCAGATGATCTCCAGCCTTaGCAGTCTAAGGCTGAGTCTGGCTTCTGCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RFHVIEADDLQP*QSKAESGFCLP Trigger: AGGCAAGCAGAAGCCAGACTCAGCCTTAGACTGCAAAGGCTGGAGATCATCTGCCTCTATCACGTGAAATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
||
| CDS CAA 90 bp | GATGATCTCCAGCCTTTGCAGTCTAAGGCTGAGTCTGGCTTCTGCTaGCCTGGCACTCTTTCTCTCCAAGTCAAACTGCTTATACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DDLQPLQSKAESGFC*PGTLSLQVKLLIQR Trigger: CCTCTGTATAAGCAGTTTGACTTGGAGAGAAAGAGTGCCAGGCAAGCAGAAGCCAGACTCAGCCTTAGACTGCAAAGGCTGGAGATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS GCA 72 bp | TCTGCTTGCCTGGCACTCTTTCTCTCCAAGTCAAACTaGTTATACAGAGGTCCCTTCACCATGCTTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SACLALFLSKSN*LYRGPFTMLLS Trigger: GGACAGAAGCATGGTGAAGGGACCTCTGTATAAGCAGTTTGACTTGGAGAGAAAGAGTGCCAGGCAAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS GCA 72 bp | ACTGTTTTTCAGTGTTCTAATTTTAGGCTCCGGGACTaGGTGCCTCTGTCCTGTTGGTGGCAAGAATGTGAC | + |
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Preference number: 6 (lower is better) Translates to: TVFQCSNFRLRD*VPLSCWWQECD Trigger: GTCACATTCTTGCCACCAACAGGACAGAGGCACGCAGTCCCGGAGCCTAAAATTAGAACACTGAAAAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS CAA 90 bp | TTCATGCCCCACATAAGAAGAGAACCTTTTCTTGATGATATCTGCTaGCTGCAGGCGCTGCAGTTCTTTCTGAAGCTGTCTCTGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FMPHIRREPFLDDIC*LQALQFFLKLSLLP Trigger: AGGGAGCAGAGACAGCTTCAGAAAGAACTGCAGCGCCTGCAGCAAGCAGATATCATCAAGAAAAGGTTCTCTTCTTATGTGGGGCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175731.3 |
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| CDS TCA 72 bp | GGACTGCGTGCCTCTGTCCTGTTGGTGGCAAGAATGTaGCAACATCTTTCGATCTCTTTTGAATTTCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GLRASVLLVARM*QHLSISFEFHA Trigger: GGCATGAAATTCAAAAGAGATCGAAAGATGTTGTCACATTCTTGCCACCAACAGGACAGAGGCACGCAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS GCA 72 bp | TTTTTCAGTGTTCTAATTTTAGGCTCCGGGACTGCGTaGCTCTGTCCTGTTGGTGGCAAGAATGTGACAACA | + |
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Preference number: 6 (lower is better) Translates to: FFSVLILGSGTA*LCPVGGKNVTT Trigger: TGTTGTCACATTCTTGCCACCAACAGGACAGAGGCACGCAGTCCCGGAGCCTAAAATTAGAACACTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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| CDS GCA 72 bp | CCCCACATAAGAAGAGAACCTTTTCTTGATGATATCTaGTTGCTGCAGGCGCTGCAGTTCTTTCTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PHIRREPFLDDI*LLQALQFFLKL Trigger: CAGCTTCAGAAAGAACTGCAGCGCCTGCAGCAAGCAGATATCATCAAGAAAAGGTTCTCTTCTTATGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175731.3 |
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| CDS CAA 90 bp | AATTTCATGCCCCACATAAGAAGAGAACCTTTTCTTGATGATATCTaGCTGCAGGCGCTGCAGTTCTTTCTGAAGCTGTCTCTGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NFMPHIRREPFLDDI*LQALQFFLKLSLLP Trigger: AGGGAGCAGAGACAGCTTCAGAAAGAACTGCAGCGCCTGCAGCAAGATATCATCAAGAAAAGGTTCTCTTCTTATGTGGGGCATGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS CAA 72 bp | CCCCACATAAGAAGAGAACCTTTTCTTGATGATATCTaGCTGCAGGCGCTGCAGTTCTTTCTGAAGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PHIRREPFLDDI*LQALQFFLKLS Trigger: AGACAGCTTCAGAAAGAACTGCAGCGCCTGCAGCAAGATATCATCAAGAAAAGGTTCTCTTCTTATGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094348.4 |
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| CDS CAA 90 bp | CTGTCCTGTTGGTGGCAAGAATGTGACAACATCTTTCGATCTCTTTaGAATTTCATGCCCCACATAAGAAGAGAACCTTTTCTTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: LSCWWQECDNIFRSL*NFMPHIRREPFLDD Trigger: ATCATCAAGAAAAGGTTCTCTTCTTATGTGGGGCATGAAATTCAAAAGAGATCGAAAGATGTTGTCACATTCTTGCCACCAACAGGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094348.4 ENSMUST00000175731.3 |
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