Pregenerated sensors for CCDC189 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057176Ensembl transcript IDs: ENSMUST00000072155.5, ENSMUST00000205839.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGCAGCCAACCTTaGAACCTCACGCCTCGCCAGCGGTTCCGGGTAAGCCCGAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: ALQHPFFERCEGSQP*NLTPRQRFRVSPRV Trigger: TACTCTCGGGCTTACCCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTCAAAGAAGGGGTGCTGCAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR TCA 90 bp | TTCTCTAGATCTCCAAGCTGCTGCAGGTGGATCCTGAAGCGCGCCTaGCAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: FSRSPSCCRWILKRA*QLSKPCSTPSLSAV Trigger: CACAGCGCTCAAAGAAGGGGTGCTGCAGGGCTTGCTCAGCTGTCAGGCGCGCTTCAGGATCCACCTGCAGCAGCTTGGAGATCTAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR GCA 90 bp | AAGGGAGCCTCTTCGAGGGTTGTGCCTGGCCTAGCTATCGCCACCTaGGCTGCATCTGAAATAAAACCTGCCACAAGCCTGGGAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KGASSRVVPGLAIAT*AASEIKPATSLGEP Trigger: TGGCTCTCCCAGGCTTGTGGCAGGTTTTATTTCAGATGCAGCGCAGGTGGCGATAGCTAGGCCAGGCACAACCCTCGAAGAGGCTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR TCA 90 bp | TTCGAGGGTTGTGCCTGGCCTAGCTATCGCCACCTGCGCTGCATCTaGAATAAAACCTGCCACAAGCCTGGGAGAGCCAGTGCCATGTCT | + |
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Preference number: 1 (lower is better) Translates to: FEGCAWPSYRHLRCI*NKTCHKPGRASAMS Trigger: AGACATGGCACTGGCTCTCCCAGGCTTGTGGCAGGTTTTATTTCAGATGCAGCGCAGGTGGCGATAGCTAGGCCAGGCACAACCCTCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR TCA 90 bp | CCATGTCTGCTGTCTAGTTTCACAGGGAAACCCAGAAGGTGCTCGTaGAGGTGGGGGATGGGACACTGTGGCCCAGGTCTTTATTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: PCLLSSFTGKPRRCS*RWGMGHCGPGLYWG Trigger: TCCCCAATAAAGACCTGGGCCACAGTGTCCCATCCCCCACCTTCACGAGCACCTTCTGGGTTTCCCTGTGAAACTAGACAGCAGACATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR GCA 90 bp | GCTAATACTGTCCCTTTCCCAGGTGGCAGTGTGGACAATACTGGCTaGCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACTAAC | + |
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Preference number: 1 (lower is better) Translates to: ANTVPFPGGSVDNTG*RTSGLKQSPFTATN Trigger: GTTAGTGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGCCAGTATTGTCCACACTGCCACCTGGGAAAGGGACAGTATTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CCA 90 bp | CTGCTTGTCACAGAAACCAGCCCTTTACCCCTACTACTCTGGACTTaGAGATCAGGGCAGAGATGGAAGGGAGCCTCTTCGAGGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLVTETSPLPLLLWT*RSGQRWKGASSRVV Trigger: CACAACCCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAGGGGTAAAGGGCTGGTTTCTGTGACAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CCA 90 bp | AGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCCTACTACTCTaGACTTGGAGATCAGGGCAGAGATGGAAGGGAGCCTCTTCGAGG | + |
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Preference number: 1 (lower is better) Translates to: RMLLVTETSPLPLLL*TWRSGQRWKGASSR Trigger: CCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAGGGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGCGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGTGAAGGTGGGGGATaGGACACTGTGGCCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FERCEGSQPWNLTPRQRFREGGG*DTVAQV Trigger: GACCTGGGCCACAGTGTCCCATCCCCCACCTTCACG...GAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR GCA 90 bp | GCGGCCAGTACGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGCCTGGGAGAGCCAGTaGCATGTCTGCTGTCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: AASTAPHRQLCLPALWALAWESQ*HVCCLV Trigger: AACTAGACAGCAGACATGGCACTGGCTCTCCCAGGC...CAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGCCGTACTGGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | CGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGCCAGTGTGGACAATACTaGCTGCCGGACGAGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RLTAEQALQHPFFERCEGQCGQY*LPDEWP Trigger: AGGCCACTCGTCCGGCAGCCAGTATTGTCCACACTG...GCCTTCACAGCGCTCAAAGAAGGGGTGCTGCAGGGCTTGCTCAGCTGTCAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | CGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGCAGATCAGGGCAGAGATaGAAGGGAGCCTCTTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: RLTAEQALQHPFFERCEGRSGQR*KGASSR Trigger: CCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCT...GCCTTCACAGCGCTCAAAGAAGGGGTGCTGCAGGGCTTGCTCAGCTGTCAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCGCTGCATCTGAAATAAAACCTGCCACAAGCCTGGGAGAGCCAGTGCCACCCAGAAGGTGCTCGTaGAGGTGGGGGATGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TCAASEIKPATSLGEPVPPRRCS*RWGMGH Trigger: GTGTCCCATCCCCCACCTTCACGAGCACCTTCTGGG...TGGCACTGGCTCTCCCAGGCTTGTGGCAGGTTTTATTTCAGATGCAGCGCAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGCTAAGAATGCACTATTaGGAGACCCCTATGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: ERCEGSQPWNLTPRQRFRLRMHY*ETPMHC Trigger: GCAGTGCATAGGGGTCTCTCAATAGTGCATTCTTAG...CCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAGATCAGGGCAGAGATGGAAGGGAGCCTCTTCGAGGGTTGTGCCTGGCCTAGGGGATGGGACACTGTaGCCCAGGTCTTTATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: WRSGQRWKGASSRVVPGLGDGTL*PRSLLG Trigger: CCCCAATAAAGACCTGGGCCACAGTGTCCCATCCCC...TAGGCCAGGCACAACCCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR GCA 90 bp | GTTCCGGGTAAGCCCGAGAGTAGCAGGGTCTGTACCCAGGCCTTGTCCTCTTCCAGCCAGTGCCATGTCTaGTGTCTAGTTTCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VPGKPESSRVCTQALSSSSQCHV*CLVSQG Trigger: TCCCTGTGAAACTAGACAGCAGACATGGCACTGGCT...GGAAGAGGACAAGGCCTGGGTACAGACCCTGCTACTCTCGGGCTTACCCGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR GCA 90 bp | TGGACAATACTGGCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACCTCATCGACAACTGTaGCTTCCGGCTCTATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WTILAAGRVALSSHRLRPPHRQL*LPALWA Trigger: TGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGG...TGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGCCAGTATTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | TGGACAATACTGGCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACGGCTCTATGGGCACTaGGTAAAGAAGGGTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WTILAAGRVALSSHRLRPRLYGH*VKKGEQ Trigger: CTGCTCACCCTTCTTTACCCAGTGCCCATAGAGCCG...TGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGCCAGTATTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGCTACTACTCTGGACTTaGAGATCAGGGCAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: APHRQLCLPALWALGKEGLLLWT*RSGQRW Trigger: CCATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAG...CCCTTCTTTACCCAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCCAAGCCTACAACTGAGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCAACCTGCCACAAGCCTaGGAGAGCCAGTGCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: LPSLQLRMLLVTETSPLPNLPQA*ESQCHV Trigger: GACATGGCACTGGCTCTCCCAGGCTTGTGGCAGGTT...GGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCTCAGTTGTAGGCTTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CCA 72 bp | CACCCCTTCTTTGAGCGCTGTGAAGGCAGCCAACCTTaGAACCTCACGCCTCGCCAGCGGTTCCGGGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: HPFFERCEGSQP*NLTPRQRFRVS Trigger: GCTTACCCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTCAAAGAAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR TCA 72 bp | TCTCCAAGCTGCTGCAGGTGGATCCTGAAGCGCGCCTaGCAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SPSCCRWILKRA*QLSKPCSTPSL Trigger: CAAAGAAGGGGTGCTGCAGGGCTTGCTCAGCTGTCAGGCGCGCTTCAGGATCCACCTGCAGCAGCTTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR GCA 72 bp | TGCACTGCGGCCAGTACGGCGCCTCATCGACAACTGTaGCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: CTAASTAPHRQL*LPALWALGKEG Trigger: CCCTTCTTTACCCAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGCCGTACTGGCCGCAGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CCA 72 bp | CCCCTACTACTCTGGACTTGGAGATCAGGGCAGAGATaGAAGGGAGCCTCTTCGAGGGTTGTGCCTGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: PLLLWTWRSGQR*KGASSRVVPGL Trigger: TAGGCCAGGCACAACCCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR TCA 72 bp | TGTGCCTGGCCTAGCTATCGCCACCTGCGCTGCATCTaGAATAAAACCTGCCACAAGCCTGGGAGAGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: CAWPSYRHLRCI*NKTCHKPGRAS Trigger: ACTGGCTCTCCCAGGCTTGTGGCAGGTTTTATTTCAGATGCAGCGCAGGTGGCGATAGCTAGGCCAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR GCA 72 bp | AACCTGCCACAAGCCTGGGAGAGCCAGTGCCATGTCTaGTGTCTAGTTTCACAGGGAAACCCAGAAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: NLPQAWESQCHV*CLVSQGNPEGA Trigger: AGCACCTTCTGGGTTTCCCTGTGAAACTAGACAGCAGACATGGCACTGGCTCTCCCAGGCTTGTGGCAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CCA 72 bp | CTTGTCACAGAAACCAGCCCTTTACCCCTACTACTCTaGACTTGGAGATCAGGGCAGAGATGGAAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LVTETSPLPLLL*TWRSGQRWKGA Trigger: GGCTCCCTTCCATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAGGGGTAAAGGGCTGGTTTCTGTGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATCCTACTACTCTGGACTaGGAGATCAGGGCAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: AAGRVALSSHRLRPLTKNPTTLD*EIRAEM Trigger: CATCTCTGCCCTGATCTCCAAGTCCAGAGTAGTAGG...ATTCTTAGTTAGTGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR TCA 90 bp | CGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGGTATTTCCTCGCTCTCCTTaGGCCGCTCCTCCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RCEGSQPWNLTPRQRFRVFPRSP*AAPPPA Trigger: AGCTGGTGGAGGAGCGGCTCAAGGAGAGCGAGGAAA...TACCCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | GCGGCCAGTACGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGACCAGCTGCTGGAGCTaGCTCAGCTCCTTGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AASTAPHRQLCLPALWALTSCWS*LSSLLS Trigger: GCTGAGCAAGGAGCTGAGGCAGCTCCAGCAGCTGGT...CAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGCCGTACTGGCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CAA 72 bp | CCCTCTTCCAGCACCAGCCTCCTAGGCTGTTCCCCATaGCTGCCACTGAACTCGAAGGAGACTCCGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSSTSLLGCSP*LPLNSKETPVP Trigger: TGGCACCGGAGTCTCCTTCGAGTTCAGTGGCAGCAATGGGGAACAGCCTAGGAGGCTGGTGCTGGAAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | CCAGCGGTTCCGGGTAAGCCCGAGAGTAGCAGGGTCTGTACCCAGGCCTTGTCCGTTTTCTTTCTCCTCTaGCCAGAGCGTGAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PAVPGKPESSRVCTQALSVFFLL*PEREWL Trigger: CAGCCACTCACGCTCTGGCCAGAGGAGAAAGAAAAC...GGACAAGGCCTGGGTACAGACCCTGCTACTCTCGGGCTTACCCGGAACCGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | ACCTGCGCTGCATCTGAAATAAAACCTGCCACAAGCCTGGGAGAGCCAGTGCCAGCATCCCGCAGGCTCTaGTCAGGAAAGCCAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TCAASEIKPATSLGEPVPASRRL*SGKPSS Trigger: GGAGCTTGGCTTTCCTGAGCAGAGCCTGCGGGATGC...TGGCACTGGCTCTCCCAGGCTTGTGGCAGGTTTTATTTCAGATGCAGCGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | CGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGGTATCATCTTTTCCACAGTaGCTGCCTTCTCCAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RCEGSQPWNLTPRQRFRVSSFPQ*LPSPVC Trigger: ACAGACTGGAGAAGGCAGCCACTGTGGAAAAGATGA...TACCCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | TTTGAGCGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCTCTGGTGAAAAGCCCTaGTGGCGGCAGAAGATAAGT | + |
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Preference number: 4 (lower is better) Translates to: FERCEGSQPWNLTPRQRFSGEKP*WRQKIS Trigger: ACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGA...GAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | CCACTGAACTCGAAGGAGACTCCGGTGCCATCACAGAGGATGAGGCTACACTGGGTGCAGCCAGTTTGCTaGTCAGCCTTTCCTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLNSKETPVPSQRMRLHWVQPVC*SAFPRS Trigger: AGAGCGAGGAAAGGCTGAGCAGCAAACTGGCTGCAC...CCAGTGTAGCCTCATCCTCTGTGATGGCACCGGAGTCTCCTTCGAGTTCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | GAGCGCTGTGAAGGCAGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGAGTCTGTGCATAGAATaGATGTCCAGGTATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ERCEGSQPWNLTPRQRFRSLCIE*MSRYFH Trigger: GTGGAAATACCTGGACATCCATTCTATGCACAGACT...CCGGAACCGCTGGCGAGGCGTGAGGTTCCAAGGTTGGCTGCCTTCACAGCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | GTTCCGGGTAAGCCCGAGAGTAGCAGGGTCTGTACCCAGGCCTTGTCCTCTTCCGAAGATCTTGGAGCATaGCACAGGCTGCTGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: VPGKPESSRVCTQALSSSEDLGA*HRLLMS Trigger: AGACATCAGCAGCCTGTGCCATGCTCCAAGATCTTC...GGAAGAGGACAAGGCCTGGGTACAGACCCTGCTACTCTCGGGCTTACCCGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR TCA 90 bp | CGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGTCGCACCTGTGGGGTaGAGACATATTTGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RRLIDNCAFRLYGHWVKKVAPVG*RHICRA Trigger: AGCTCTACAAATATGTCTTCACCCCACAGGTGCGAC...CTTCTTTACCCAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | GCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATCCAGTGCAGCCAGTTTaGTGCTCAGCCTTTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: AAGRVALSSHRLRPLTKNPVQPV*CSAFPR Trigger: GCGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGG...ATTCTTAGTTAGTGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | CGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGACTTGGTCTTGGTCTTaGCTTTGCTGGGAGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RRLIDNCAFRLYGHWVKKTWSWS*LCWEVS Trigger: AGACACCTCCCAGCAAAGGCAAGACCAAGACCAAGT...CTTCTTTACCCAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | GAACTCGAAGGAGACTCCGGTGCCATCACAGAGGATGAGGCTACACTGGTACGGCTTTTCCACAGTGGCTaGCTTCTCCAGTCTGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ELEGDSGAITEDEATLVRLFHSG*LLQSVH Trigger: ATGCACAGACTGGAGAAGGCAGCCACTGTGGAAAAG...CCGTACCAGTGTAGCCTCATCCTCTGTGATGGCACCGGAGTCTCCTTCGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | GCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATCAGGCTGCTGATGTCTaGTCTGGTGAAAAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AAGRVALSSHRLRPLTKNQAADV*SGEKPC Trigger: GCAGGGCTTTTCACCAGAGCAGACATCAGCAGCCTG...ATTCTTAGTTAGTGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | GCTGCCGGACGAGTGGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATTGGTCTTGCCTTTGCTaGGAGGTGTCTGGAACGGCT | + |
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Preference number: 4 (lower is better) Translates to: AAGRVALSSHRLRPLTKNWSCLC*EVSGTA Trigger: AGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCA...ATTCTTAGTTAGTGGCCGTAAACGGTGACTGCTTAAGGCCACTCGTCCGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| 3UTR CAA 72 bp | AGTCACCGTTTACGGCCACTAACTAAGAATGCACTATaGAGAGACCCCTATGCACTGCGGCCAGTACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SHRLRPLTKNAL*RDPYALRPVRR Trigger: GCGCCGTACTGGCCGCAGTGCATAGGGGTCTCTCAATAGTGCATTCTTAGTTAGTGGCCGTAAACGGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | GCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGCAGAAGATAAGTGCGTaGGAGAAGAGGTCCAAGATA | + |
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Preference number: 4 (lower is better) Translates to: APHRQLCLPALWALGKEGQKISA*EKRSKI Trigger: TATCTTGGACCTCTTCTCCCACGCACTTATCTTCTG...CCCTTCTTTACCCAGTGCCCATAGAGCCGGAAGGCACAGTTGTCGATGAGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CCA 90 bp | GAACTCGAAGGAGACTCCGGTGCCATCACAGAGGATGAGGCTACACTGGTACGGGTCCAGTCGCACCTGTaGGGTGAAGACATATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: ELEGDSGAITEDEATLVRVQSHL*GEDIFV Trigger: TACAAATATGTCTTCACCCCACAGGTGCGACTGGAC...CCGTACCAGTGTAGCCTCATCCTCTGTGATGGCACCGGAGTCTCCTTCGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR TCA 90 bp | ACTGAGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCCTACTACTCTGGACTGCTCAGCTGGGACTTaGTGTAGGTCTGGAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: TENAACHRNQPFTPTTLDCSAGT*CRSGGC Trigger: GCATCCTCCAGACCTACATCAAGTCCCAGCTGAGCA...GTCCAGAGTAGTAGGGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAAGCCTACAACTGAGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCGCGGCAGAAGATAAGTaGGTGGGAGAAGAGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSLQLRMLLVTETSPLPAAEDK*VGEEVQ Trigger: TTGGACCTCTTCTCCCACGCACTTATCTTCTGCCGC...GGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCTCAGTTGTAGGCTTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR TCA 90 bp | CGGCCACTAACTAAGAATGCACTATTGAGAGACCCCTATGCACTGCGGCCAGTACATATTTGTAGAGCTTaGAGTGGCGGAAGTAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RPLTKNALLRDPYALRPVHICRA*SGGSRC Trigger: ACACCTACTTCCGCCACTTCAAGCTCTACAAATATG...TACTGGCCGCAGTGCATAGGGGTCTCTCAATAGTGCATTCTTAGTTAGTGGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAAGCCTACAACTGAGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCCTGTCCAGTTCCTCCTaGAATTTGGGAGATTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPSLQLRMLLVTETSPLPLSSSS*NLGDCS Trigger: GGAACAATCTCCCAAATTGCAGGAGGAACTGGACAG...GGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCTCAGTTGTAGGCTTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | CTTGGTCTTGCCTTTGCTGGGAGGTGTCTGGAACGGCTGCTCCAGTaGAGCCAGTTTGCTGCTCAGCCTTTCCTCGCTCTCCTTGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: LGLAFAGRCLERLLQ*SQFAAQPFLALLEP Trigger: CGGCTCAAGGAGAGCGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS-3UTR CAA 90 bp | GAACTCGAAGGAGACTCCGGTGCCATCACAGAGGATGAGGCTACACTGGTACGGCTTTCCTCGCTCTCCTaGAGCCGCTCCTCCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: ELEGDSGAITEDEATLVRLSSLS*SRSSTS Trigger: GCTGGTGGAGGAGCGGCTCAAGGAGAGCGAGGAAAG...CCGTACCAGTGTAGCCTCATCCTCTGTGATGGCACCGGAGTCTCCTTCGAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CAA 90 bp | CGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGCCACTTGGTCTTGGTCTaGCCTTTGCTGGGAGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RLTAEQALQHPFFERCEGHLVLV*PLLGGV Trigger: GACACCTCCCAGCAAAGGCAAGACCAAGACCAAGTG...GCCTTCACAGCGCTCAAAGAAGGGGTGCTGCAGGGCTTGCTCAGCTGTCAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | GGCTCCAGGATCTTCAGCCACTTCCACAGGGCTACTAGTGGCTTCTaGGGGCGACTCGGTCTGCATGTCTGTTCCGTTCCTTATGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: GSRIFSHFHRATSGF*GRLGLHVCSVPYGR Trigger: TCGGCCATAAGGAACGGAACAGACATGCAGACCGAGTCGCCCGCAGAAGCCACTAGTAGCCCTGTGGAAGTGGCTGAAGATCCTGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | CACTTGGTCTTGGTCTTGCCTTTGCTGGGAGGTGTCTGGAACGGCTaGTCCAGTGCAGCCAGTTTGCTGCTCAGCCTTTCCTCGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HLVLVLPLLGGVWNG*SSAASLLLSLSSLS Trigger: GGAGAGCGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCAAGACCAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS-3UTR CAA 90 bp | TGGAGATCAGGGCAGAGATGGAAGGGAGCCTCTTCGAGGGTTGTGCCTGGCCTATCCAGTGCAGCCAGTTaGCTGCTCAGCCTTTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: WRSGQRWKGASSRVVPGLSSAAS*LLSLSS Trigger: CGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGGA...TAGGCCAGGCACAACCCTCGAAGAGGCTCCCTTCCATCTCTGCCCTGATCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 90 bp | GCTCAGCTGGGACTTGATGTAGGTCTGGAGGATGCACACCTCACTTaGCTGTTGCTCTGGCTCCGTCACAGTTTCCGGCTCTTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AQLGLDVGLEDAHLT*LLLWLRHSFRLFLL Trigger: CAGGAGGAAGAGCCGGAAACTGTGACGGAGCCAGAGCAACAGCCAAGTGAGGTGTGCATCCTCCAGACCTACATCAAGTCCCAGCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS-3UTR CAA 90 bp | GAACTCGAAGGAGACTCCGGTGCCATCACAGAGGATGAGGCTACACTGGTACGGCACCTCACTTGGCTGTaGCTCTGGCTCCGTCACAGT | + |
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Preference number: 5 (lower is better) Translates to: ELEGDSGAITEDEATLVRHLTWL*LWLRHS Trigger: ACTGTGACGGAGCCAGAGCAACAGCCAAGTGAGGTG...CCGTACCAGTGTAGCCTCATCCTCTGTGATGGCACCGGAGTCTCCTTCGAGTTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 90 bp | AGCCGTCCACCGAGCTGGGACTCCTGTCCAGTTCCTCCTGCAATTTaGGAGATTGTTCCGACTCCATCTGCACCTTCATTCCCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRPPSWDSCPVPPAI*EIVPTPSAPSFPGS Trigger: AGAGCCTGGGAATGAAGGTGCAGATGGAGTCGGAACAATCTCCCAAATTGCAGGAGGAACTGGACAGGAGTCCCAGCTCGGTGGACGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 90 bp | GTCTGCTCTGGTGAAAAGCCCTGCTGGCGGCAGAAGATAAGTGCGTaGGAGAAGAGGTCCAAGATAATGGCATCCCGCAGGCTCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: VCSGEKPCWRQKISA*EKRSKIMASRRLCS Trigger: TGAGCAGAGCCTGCGGGATGCCATTATCTTGGACCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGAGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | AGTGCGTGGGAGAAGAGGTCCAAGATAATGGCATCCCGCAGGCTCTaGTCAGGAAAGCCAAGCTCCAAGAGCTCAGCAAGAACCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SAWEKRSKIMASRRL*SGKPSSKSSARTSL Trigger: GAGAGAGGTTCTTGCTGAGCTCTTGGAGCTTGGCTTTCCTGAGCAGAGCCTGCGGGATGCCATTATCTTGGACCTCTTCTCCCACGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | TGGAGCATGGCACAGGCTGCTGATGTCTGCTCTGGTGAAAAGCCCTaGTGGCGGCAGAAGATAAGTGCGTGGGAGAAGAGGTCCAAGATA | + |
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Preference number: 5 (lower is better) Translates to: WSMAQAADVCSGEKP*WRQKISAWEKRSKI Trigger: TATCTTGGACCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGAGCAGACATCAGCAGCCTGTGCCATGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 90 bp | TGCATAGAATGGATGTCCAGGTATTTCCACATACAGATCCGGGGCTaGGGTAGTGGTGGCGGGAACAAGTTGGCTCCAGGATCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: CIEWMSRYFHIQIRG*GSGGGNKLAPGSSA Trigger: GGCTGAAGATCCTGGAGCCAACTTGTTCCCGCCACCACTACCCCAGCCCCGGATCTGTATGTGGAAATACCTGGACATCCATTCTATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 90 bp | AGCATGGCACAGGCTGCTGATGTCTGCTCTGGTGAAAAGCCCTGCTaGCGGCAGAAGATAAGTGCGTGGGAGAAGAGGTCCAAGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: SMAQAADVCSGEKPC*RQKISAWEKRSKIM Trigger: CATTATCTTGGACCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGAGCAGACATCAGCAGCCTGTGCCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS-3UTR CAA 90 bp | ACTGAGAATGCTGCTTGTCACAGAAACCAGCCCTTTACCCCTACTACTCTGGACAGCTGCCTCAGCTCCTaGCTCAGCTGGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TENAACHRNQPFTPTTLDSCLSS*LSWDLM Trigger: CATCAAGTCCCAGCTGAGCAAGGAGCTGAGGCAGCT...GTCCAGAGTAGTAGGGGTAAAGGGCTGGTTTCTGTGACAAGCAGCATTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS TCA 90 bp | CTACCACCATCATCTCCTCGTTTTCTTTCTCCTCTGGCCAGAGCGTaGGTGGCTGTAACCCCGTGTAAGTCAAAGATAGGTCCAGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LPPSSPRFLSPLARA*VAVTPCKSKIGPVA Trigger: TGCGACTGGACCTATCTTTGACTTACACGGGGTTACAGCCACTCACGCTCTGGCCAGAGGAGAAAGAAAACGAGGAGATGATGGTGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 90 bp | AGAACCTCTCTCATCTTTTCCACAGTGGCTGCCTTCTCCAGTCTGTaGATAGAATGGATGTCCAGGTATTTCCACATACAGATCCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RTSLIFSTVAAFSSL*IEWMSRYFHIQIRG Trigger: GCCCCGGATCTGTATGTGGAAATACCTGGACATCCATTCTATGCACAGACTGGAGAAGGCAGCCACTGTGGAAAAGATGAGAGAGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 90 bp | TTTGTAGAGCTTGAAGTGGCGGAAGTAGGTGTTGACCACATAGTCTaGCAGTGCCAGCAGCTGTTCCTCTTTAAAGAGGTCAATGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FVELEVAEVGVDHIV*QCQQLFLFKEVNAE Trigger: TTCAGCATTGACCTCTTTAAAGAGGAACAGCTGCTGGCACTGGCAGACTATGTGGTCAACACCTACTTCCGCCACTTCAAGCTCTACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CAA 90 bp | CCTTTGCTGGGAGGTGTCTGGAACGGCTGCTCCAGTGCAGCCAGTTaGCTGCTCAGCCTTTCCTCGCTCTCCTTGAGCCGCTCCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PLLGGVWNGCSSAAS*LLSLSSLSLSRSST Trigger: GGTGGAGGAGCGGCTCAAGGAGAGCGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 72 bp | GCCTTTGCTGGGAGGTGTCTGGAACGGCTGCTCCAGTaGAGCCAGTTTGCTGCTCAGCCTTTCCTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AFAGRCLERLLQ*SQFAAQPFLAL Trigger: GAGAGCGAGGAAAGGCTGAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS CCA 72 bp | AGATCCGGGGCTGGGGTAGTGGTGGCGGGAACAAGTTaGCTCCAGGATCTTCAGCCACTTCCACAGGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: RSGAGVVVAGTS*LQDLQPLPQGY Trigger: GTAGCCCTGTGGAAGTGGCTGAAGATCCTGGAGCCAACTTGTTCCCGCCACCACTACCCCAGCCCCGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 72 bp | CTGTTCCGTTCCTTATGGCCGAGCCGTCCACCGAGCTaGGACTCCTGTCCAGTTCCTCCTGCAATTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFRSLWPSRPPS*DSCPVPPAIWE Trigger: CTCCCAAATTGCAGGAGGAACTGGACAGGAGTCCCAGCTCGGTGGACGGCTCGGCCATAAGGAACGGAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CAA 90 bp | TTCCACATACAGATCCGGGGCTGGGGTAGTGGTGGCGGGAACAAGTaGGCTCCAGGATCTTCAGCCACTTCCACAGGGCTACTAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FHIQIRGWGSGGGNK*APGSSATSTGLLVA Trigger: AGCCACTAGTAGCCCTGTGGAAGTGGCTGAAGATCCTGGAGCCAACTTGTTCCCGCCACCACTACCCCAGCCCCGGATCTGTATGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS TCA 72 bp | GCTGGAGCTGCCTCAGCTCCTTGCTCAGCTGGGACTTaGTGTAGGTCTGGAGGATGCACACCTCACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGAASAPCSAGT*CRSGGCTPHLA Trigger: AGCCAAGTGAGGTGTGCATCCTCCAGACCTACATCAAGTCCCAGCTGAGCAAGGAGCTGAGGCAGCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 72 bp | GCACAGGCTGCTGATGTCTGCTCTGGTGAAAAGCCCTaGTGGCGGCAGAAGATAAGTGCGTGGGAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQAADVCSGEKP*WRQKISAWEKR Trigger: CCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGAGCAGACATCAGCAGCCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 72 bp | TTGGTCTTGCCTTTGCTGGGAGGTGTCTGGAACGGCTaGTCCAGTGCAGCCAGTTTGCTGCTCAGCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLPLLGGVWNG*SSAASLLLSLS Trigger: GGAAAGGCTGAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS CCA 72 bp | CAGGCTGCTGATGTCTGCTCTGGTGAAAAGCCCTGCTaGCGGCAGAAGATAAGTGCGTGGGAGAAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QAADVCSGEKPC*RQKISAWEKRS Trigger: GGACCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACCAGAGCAGACATCAGCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 72 bp | CACTTGGTCTTGGTCTTGCCTTTGCTGGGAGGTGTCTaGAACGGCTGCTCCAGTGCAGCCAGTTTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLVLVLPLLGGV*NGCSSAASLLL Trigger: GAGCAGCAAACTGGCTGCACTGGAGCAGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCAAGACCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS CAA 90 bp | CACCGAGCTGGGACTCCTGTCCAGTTCCTCCTGCAATTTGGGAGATaGTTCCGACTCCATCTGCACCTTCATTCCCAGGCTCTGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HRAGTPVQFLLQFGR*FRLHLHLHSQALAG Trigger: TCCAGCCAGAGCCTGGGAATGAAGGTGCAGATGGAGTCGGAACAATCTCCCAAATTGCAGGAGGAACTGGACAGGAGTCCCAGCTCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS TCA 72 bp | TCCACGTTGCCCAGAGGGGTAGCAACACAGGCCTTGTaGAGATCTTGGAGCATGGCACAGGCTGCTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: STLPRGVATQAL*RSWSMAQAADV Trigger: GACATCAGCAGCCTGTGCCATGCTCCAAGATCTTCACAAGGCCTGTGTTGCTACCCCTCTGGGCAACGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS CCA 72 bp | GGTGAAAAGCCCTGCTGGCGGCAGAAGATAAGTGCGTaGGAGAAGAGGTCCAAGATAATGGCATCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GEKPCWRQKISA*EKRSKIMASRR Trigger: CCTGCGGGATGCCATTATCTTGGACCTCTTCTCCCACGCACTTATCTTCTGCCGCCAGCAGGGCTTTTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 72 bp | GGACTTGATGTAGGTCTGGAGGATGCACACCTCACTTaGCTGTTGCTCTGGCTCCGTCACAGTTTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLDVGLEDAHLT*LLLWLRHSFRL Trigger: GAGCCGGAAACTGTGACGGAGCCAGAGCAACAGCCAAGTGAGGTGTGCATCCTCCAGACCTACATCAAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS CAA 72 bp | GATGTAGGTCTGGAGGATGCACACCTCACTTGGCTGTaGCTCTGGCTCCGTCACAGTTTCCGGCTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DVGLEDAHLTWL*LWLRHSFRLFL Trigger: GAGGAAGAGCCGGAAACTGTGACGGAGCCAGAGCAACAGCCAAGTGAGGTGTGCATCCTCCAGACCTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 72 bp | TCCTCCTGCAATTTGGGAGATTGTTCCGACTCCATCTaGACCTTCATTCCCAGGCTCTGGCTGGAACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCNLGDCSDSI*TFIPRLWLELG Trigger: CCCCAGTTCCAGCCAGAGCCTGGGAATGAAGGTGCAGATGGAGTCGGAACAATCTCCCAAATTGCAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 72 bp | CTCTGGCTCCGTCACAGTTTCCGGCTCTTCCTCCTGTaGAGTAGCTACTTGCTCTACCACCATCATCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LWLRHSFRLFLL*SSYLLYHHHLL Trigger: GAGGAGATGATGGTGGTAGAGCAAGTAGCTACTCCACAGGAGGAAGAGCCGGAAACTGTGACGGAGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 72 bp | GAGAAGAGGTCCAAGATAATGGCATCCCGCAGGCTCTaGTCAGGAAAGCCAAGCTCCAAGAGCTCAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EKRSKIMASRRL*SGKPSSKSSAR Trigger: TCTTGCTGAGCTCTTGGAGCTTGGCTTTCCTGAGCAGAGCCTGCGGGATGCCATTATCTTGGACCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS CCA 72 bp | TCCACAGTGGCTGCCTTCTCCAGTCTGTGCATAGAATaGATGTCCAGGTATTTCCACATACAGATCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STVAAFSSLCIE*MSRYFHIQIRG Trigger: GCCCCGGATCTGTATGTGGAAATACCTGGACATCCATTCTATGCACAGACTGGAGAAGGCAGCCACTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS GCA 72 bp | CTTGAAGTGGCGGAAGTAGGTGTTGACCACATAGTCTaGCAGTGCCAGCAGCTGTTCCTCTTTAAAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LEVAEVGVDHIV*QCQQLFLFKEV Trigger: GACCTCTTTAAAGAGGAACAGCTGCTGGCACTGGCAGACTATGTGGTCAACACCTACTTCCGCCACTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072155.5 |
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| CDS TCA 72 bp | TCATCTCCTCGTTTTCTTTCTCCTCTGGCCAGAGCGTaGGTGGCTGTAACCCCGTGTAAGTCAAAGATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPRFLSPLARA*VAVTPCKSKIG Trigger: ACCTATCTTTGACTTACACGGGGTTACAGCCACTCACGCTCTGGCCAGAGGAGAAAGAAAACGAGGAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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| CDS GCA 72 bp | ACAGTTTCCGGCTCTTCCTCCTGTGGAGTAGCTACTTaGTCTACCACCATCATCTCCTCGTTTTCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSGSSSCGVAT*STTIISSFSFS Trigger: GGAGAAAGAAAACGAGGAGATGATGGTGGTAGAGCAAGTAGCTACTCCACAGGAGGAAGAGCCGGAAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072155.5 ENSMUST00000205839.2 |
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