Pregenerated sensors for CCDC188 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090777Ensembl transcript IDs: ENSMUST00000167061.2, ENSMUST00000231369.2, ENSMUST00000231860.2, ENSMUST00000231965.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGCCTTCTCCTTaGTGGGGCCACTGGGCTTCCGGTCTAGAAAGGCAGGAAGTCGTC | + |
|
Preference number: 1 (lower is better) Translates to: GPWVPGTEPATWPSP*WGHWASGLERQEVV Trigger: GACGACTTCCTGCCTTTCTAGACCGGAAGCCCAGTGGCCCCAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR TCA 90 bp | ATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTaGGTGCGGCAATGGGCCCTCTCCCTGGCTCAGCCCGGGGTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: ICGLPFSIICCCFLA*VRQWALSLAQPGVP Trigger: GGGGACCCCGGGCTGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR CCA 90 bp | CCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGCCTTCTCCTTGCTaGGGCCACTGGGCTTCCGGTCTAGAAAGGCAGGAAGTCGTCCAC | + |
|
Preference number: 1 (lower is better) Translates to: PWVPGTEPATWPSPC*GHWASGLERQEVVH Trigger: GTGGACGACTTCCTGCCTTTCTAGACCGGAAGCCCAGTGGCCCCAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGACCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTATACGTAGGCCGCTGTGCAAGCCAGCAGAGCACCCAGCAGCAGCCTCAAGGAATGGGCCCTCTCCCTaGCTCAGCCCGGGGTCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: RIRRPLCKPAEHPAAASRNGPSP*LSPGSP Trigger: CGGGGACCCCGGGCTGAGCCAGGGAGAGGGCCCATT...CCTTGAGGCTGCTGCTGGGTGCTCTGCTGGCTTGCACAGCGGCCTACGTATACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR CAA 90 bp | AGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGCCTTCTCCTaGCTGGGGCCACTGGGCTTCCGGTCTAGAAAGGCAGGAAGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: RPLGPWNRASHLAFS*LGPLGFRSRKAGSR Trigger: ACGACTTCCTGCCTTTCTAGACCGGAAGCCCAGTGGCCCCAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR CAA 90 bp | CTCGGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTaGCTTCCTGGCCTGAGTGCGGCAATGGGCCCTCTCCCTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGTSHLWPAFLHHLL*LPGLSAAMGPLPGS Trigger: TGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCATCCCATCTGTGGCCTaGCTTTCTCCATCATTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VMTVYPAAGPALRTSPSSIPSVA*LSPSFA Trigger: AGCAAATGATGGAGAAAGGCAGGCCACAGATGGGAT...GGAGGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCGGAACATCCCATCTGTaGCCTGCCTTTCTCCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: CVMTVYPAAGPALRTSPSGTSHL*PAFLHH Trigger: ATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR GCA 72 bp | GTCCCTGGAACAGAGCCAGCCACCTGGCCTTCTCCTTaGTGGGGCCACTGGGCTTCCGGTCTAGAAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPGTEPATWPSP*WGHWASGLERQ Trigger: CTGCCTTTCTAGACCGGAAGCCCAGTGGCCCCAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR GCA 72 bp | CTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTGAGTaGGGCAATGGGCCCTCTCCCTGGCTCAGCCCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSPSFAVASWPE*GNGPSPWLSPG Trigger: CCCCGGGCTGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR TCA 72 bp | CTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTaGGTGCGGCAATGGGCCCTCTCCCTGGCTCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPFSIICCCFLA*VRQWALSLAQP Trigger: GGGCTGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR CCA 72 bp | TGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTaGAACAGAGCCAGCCACCTGGCCTTCTCCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CCRQGPVRPLGP*NRASHLAFSLL Trigger: CAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| 3UTR-3UTR CAA 90 bp | TACGTAGGCCGCTGTGCAAGCCAGCAGAGCACCCAGCAGCAGCCTCAAGGCCAGGCCTTTCTCCATCATTaGCTGTTGCTTCCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YVGRCASQQSTQQQPQGQAFLHH*LLLPGL Trigger: CAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGC...CTGGCCTTGAGGCTGCTGCTGGGTGCTCTGCTGGCTTGCACAGCGGCCTACGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR GCA 72 bp | GGCCCTTTAGGCCCTCGGAACATCCCATCTGTGGCCTaGCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPLGPRNIPSVA*LSPSFAVASWP Trigger: AGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCCGAGGGCCTAAAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| 3UTR CCA 72 bp | CCCTTCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTaGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PFSAALGRDCVQ*CCRQGPVRPLG Trigger: ACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGCCTTCTCCTTGCTGGGGCCAGGCATGGGCAGGGCCTaGGTCCTGAGGTGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLGPWNRASHLAFSLLGPGMGRA*VLRWGI Trigger: GATCCCCCACCTCAGGACCCAGGCCCTGCCCATGCC...TGGCCCCAGCAAGGAGAAGGCCAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCAGGGGCCAGGTGGCTaGCTCGGGAGACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCCRQGPVRPLGPWNRASQGPGG*LGRPGQ Trigger: CTGGCCTGGTCTCCCGAGTCAGCCACCTGGCCCCTG...GCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCGGCATGGGCAGGGCCTaGGTCCTGAGGTGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QWCCRQGPVRPLGPWNRAGMGRA*VLRWGI Trigger: GATCCCCCACCTCAGGACCCAGGCCCTGCCCATGCC...GGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTCGAAGGGTGTGGGGTCCACCACGTATACGTAGGCCGCTGTGCAAGCCAGTCCTCCATGGCTGCTTaGAACTGGGGCCAGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PLEGCGVHHVYVGRCASQSSMAA*NWGQRT Trigger: CGTCCTCTGGCCCCAGTTTCAAGCAGCCATGGAGGA...CTGGCTTGCACAGCGGCCTACGTATACGTGGTGGACCCCACACCCTTCGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | GACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGGGCCCAGTAGGGCCCTaGGCTTCCAGACAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCVQWCCRQGPVRPLGPWGPVGP*ASRQQL Trigger: GAGCTGCTGTCTGGAAGCTCAGGGCCCTACTGGGCC...CCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTTCCAGGGGCCAGGTaGCTGACTCGGGAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRQGPVRPLGPWNRASHLPGAR*LTRETR Trigger: CCTGGTCTCCCGAGTCAGCCACCTGGCCCCTGGAAG...GTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGCCTCCGGCCCATCACTaGGCCACATCCACTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPVRPLGPWNRASHLPPAHH*ATSTGP Trigger: AGGGCCAGTGGATGTGGCCCAGTGATGGGCCGGAGG...CAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGCCTCCCCTTCTTGTCTaGCCCCTGCTGGCTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPVRPLGPWNRASHLPPLLV*PLLALE Trigger: CTCGAGAGCCAGCAGGGGCCAGACAAGAAGGGGAGG...CAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | CGTATACGTAGGCCGCTGTGCAAGCCAGCAGAGCACCCAGCAGCAGCCTCAAGGCCCACTCCCTGTCCCTaGAGCTGGGAAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIRRPLCKPAEHPAAASRPTPCP*SWERSG Trigger: TCCAGACCTTTCCCAGCTCCAGGGACAGGGAGTGGG...CCTTGAGGCTGCTGCTGGGTGCTCTGCTGGCTTGCACAGCGGCCTACGTATACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCGAGAGGCAGAGGAAGTaGAGCCAGTCCTCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVMTVYPAAGPALRTSPSERQRK*SQSSGP Trigger: TGGGCCGGAGGACTGGCTTCACTTCCTCTGCCTCTC...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACTTCTTGTCTGGCCCCTaGTGGCTCTCGAGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CCRQGPVRPLGPWNRASHFLSGP*WLSSSP Trigger: CGGAGAGCTCGAGAGCCAGCAGGGGCCAGACAAGAA...GTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGCAGACCCCAGTGTCCTaGCCTGAAGCTGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCVQWCCRQGPVRPLGPWQTPVS*PEAVWE Trigger: CTCCCACACAGCTTCAGGGCAGGACACTGGGGTCTG...CCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGCCCACTCCCTGTCCCTaGAGCTGGGAAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DCVQWCCRQGPVRPLGPWPTPCP*SWERSG Trigger: TCCAGACCTTTCCCAGCTCCAGGGACAGGGAGTGGG...CCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCGCCAGCAGCCAGAGGTaGCCCTTTAGGCCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVMTVYPAAGPALRTSPSASSQR*PFRPSE Trigger: TTCCGAGGGCCTAAAGGGCCACCTCTGGCTGCTGGC...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCGCCCCTCGAAGGGTGTaGGGTCCACCACGTATACGT | + |
|
Preference number: 4 (lower is better) Translates to: VMTVYPAAGPALRTSPSSAPRRV*GPPRIR Trigger: ACGTATACGTGGTGGACCCCACACCCTTCGAGGGGC...GGAGGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCTCCATGGCTGCTTaGAACTGGGGCCAGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: CVMTVYPAAGPALRTSPSSSMAA*NWGQRT Trigger: CGTCCTCTGGCCCCAGTTTCAAGCAGCCATGGAGGA...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCAGCAGCTGCACAGGTaGCCTGTCTTCCAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRDCVQWCCRQGPVRPLGQQLHR*PVFQGP Trigger: TGGCCCCTGGAAGACAGGGCACCTGTGCAGCTGCTG...ACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTTGCTTCCTGGCCTGAGTGCGGCAATGGGCCCTCTCCCTGGCTCAGCCTGCCTTTTCAGACTCTaGTTCTCCTGCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPGLSAAMGPLPGSACLFRL*FSCSSC Trigger: GCAGCTGGAGCAGGAGAACCAGAGTCTGAAAAGGCA...GGCTGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCCCTGTCCCTGGAGCTaGGAAAGGTCTGGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: WCCRQGPVRPLGPWNRASPCPWS*ERSGRL Trigger: GAGTCTTCCAGACCTTTCCCAGCTCCAGGGACAGGG...GCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCGATCTCTCCTTCGCTTaGCAGAAACATCCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWCCRQGPVRPLGPWNRADLSFA*QKHPRG Trigger: GCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATC...GGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCGGGAGCTGGTCTAGATaGAGCTGTGGCCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWCCRQGPVRPLGPWNRAGSWSR*SCGLSS Trigger: AGAGGAAAGGCCACAGCTTCATCTAGACCAGCTCCC...GGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGGGAGCTGGTCTAGATaGAGCTGTGGCCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPVRPLGPWNRASHLGSWSR*SCGLSS Trigger: AGAGGAAAGGCCACAGCTTCATCTAGACCAGCTCCC...CAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTTTCTTGTCTGGCCCCTaGTGGCTCTCGAGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRDCVQWCCRQGPVRPLGFLSGP*WLSSSP Trigger: CGGAGAGCTCGAGAGCCAGCAGGGGCCAGACAAGAA...ACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTTGCTTCCTGGCCTGAGTGCGGCAATGGGCCCTCTCCCTGGCTCAGCCCGAAGGTCCTGGTTCTaGCTTTTCAGACTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPGLSAAMGPLPGSARRSWF*LFRLWF Trigger: GAACCAGAGTCTGAAAAGGCAGAACCAGGACCTTCG...GGCTGAGCCAGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGCAGCAGCTGCACAGGTaGCCTGTCTTCCAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQLLVETVCSGAVGKDQQQLHR*PVFQGP Trigger: TGGCCCCTGGAAGACAGGGCACCTGTGCAGCTGCTG...CTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCAGACAGCAGCTCTaGTCAGCAGGGGTGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVMTVYPAAGPALRTSPSSRQQL*SAGVVP Trigger: TGGTACCACCCCTGCTGAGCAGAGCTGCTGTCTGGA...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGATCCTGTCTGCCTAGGTaGCCCCTGCTCATGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSAALGRDCVQWCCRQGSCLPR*PLLMPW Trigger: CCAGGGCATGAGCAGGGGCCACCTAGGCAGACAGGA...TCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | GGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTTCCAGGGGCCAGGTaGCTGACTCGGGAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHLWPAFLHHLLLLPGLPGAR*LTRETR Trigger: CCTGGTCTCCCGAGTCAGCCACCTGGCCCCTGGAAG...GCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | GAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCCCCGGATGTCCTTCTTaGGGTTCAGGAGCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHPICGLPFSIICCCFLAPGCPS*GSGARW Trigger: CCACCGGGCTCCTGAACCTCAAGAAGGACATCCGGG...GGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | CGTATACGTAGGCCGCTGTGCAAGCCAGCAGAGCACCCAGCAGCAGCCTCAAGGAGACTCTGGTTCTCCTaGTCCAGCTGCAGAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIRRPLCKPAEHPAAASRRLWFS*SSCRKD Trigger: ATCCTTTCTGCAGCTGGAGCAGGAGAACCAGAGTCT...CCTTGAGGCTGCTGCTGGGTGCTCTGCTGGCTTGCACAGCGGCCTACGTATACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | GTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCGACAATCGGATCTGTTaGAGCTCACTCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMTVYPAAGPALRTSPSSDNRIC*SSLWDC Trigger: GCAGTCCCAGAGTGAGCTGCAACAGATCCGATTGTC...GGAGGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGACAATCGGATCTGTTaGAGCTCACTCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPVRPLGPWNRASHLDNRIC*SSLWDC Trigger: GCAGTCCCAGAGTGAGCTGCAACAGATCCGATTGTC...CAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | GAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCCCTCCCCTTCTTGTCTaGCCCCTGCTGGCTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EHPICGLPFSIICCCFLAPPLLV*PLLALE Trigger: CTCGAGAGCCAGCAGGGGCCAGACAAGAAGGGGAGG...GGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCTGCCTTTTCAGACTCTaGTTCTCCTGCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWCCRQGPVRPLGPWNRACLFRL*FSCSSC Trigger: GCAGCTGGAGCAGGAGAACCAGAGTCTGAAAAGGCA...GGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | GGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCAGACCCCAGTGTCCTaGCCTGAAGCTGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHLWPAFLHHLLLLPGQTPVS*PEAVWE Trigger: CTCCCACACAGCTTCAGGGCAGGACACTGGGGTCTG...GCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCGAAGGTCCTGGTTCTaGCTTTTCAGACTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WCCRQGPVRPLGPWNRASRRSWF*LFRLWF Trigger: GAACCAGAGTCTGAAAAGGCAGAACCAGGACCTTCG...GCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTGAGTGCGGCAATGCCCTGTCCCTGGAGCTaGGAAAGGTCTGGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: WPAFLHHLLLLPGLSAAMPCPWS*ERSGRL Trigger: GAGTCTTCCAGACCTTTCCCAGCTCCAGGGACAGGG...CATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACCTGGGAACATCCCATCTGTaGCCTGCCTTTCTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPVRPLGPWNRASHLGTSHL*PAFLHH Trigger: ATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC...CAGGTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| 3UTR CAA 72 bp | GGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTaGCTGTTGCTTCCTGGCCTGAGTGCGGCAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSHLWPAFLHH*LLLPGLSAAMG Trigger: GCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGAGATCTCTCCTTCGCTTaGCAGAAACATCCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSAALGRDCVQWCCRQGDLSFA*QKHPRG Trigger: GCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATC...TCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCTTCTCCTGCTCCAGCTaGAGAAAGGATTGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWCCRQGPVRPLGPWNRAFSCSS*RKDCSA Trigger: TGCAGAACAATCCTTTCTGCAGCTGGAGCAGGAGAA...GGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCAGACTCTGGTTCTCCTaGTCCAGCTGCAGAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVMTVYPAAGPALRTSPSRLWFS*SSCRKD Trigger: ATCCTTTCTGCAGCTGGAGCAGGAGAACCAGAGTCT...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCACATCCCATCTGTGGCCTaGCTTTCTCCATCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCRQGPVRPLGPWNRASHIPSVA*LSPSFA Trigger: AGCAAATGATGGAGAAAGGCAGGCCACAGATGGGAT...GTGGCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGAAAAGTACTCTTTCCCTaGGCAGAGCTCCTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSAALGRDCVQWCCRQGKVLFP*AELLPQ Trigger: CTGCGGCAGGAGCTCTGCCCAGGGAAAGAGTACTTT...TCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCTGCAGCTCTTGGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGAATCCACTGGCCCTCATaGCCATCATCCCTACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSAALGRDCVQWCCRQGIHWPS*PSSLPW Trigger: CCATGGTAGGGATGATGGCCATGAGGGCCAGTGGAT...TCCTTGCCTACAGCACCACTGCACACAGTCTCTACCAAGAGCTGCAGAGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CCA 90 bp | GGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCAAAGTACTCTTTCCCTaGGCAGAGCTCCTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHLWPAFLHHLLLLPGKVLFP*AELLPQ Trigger: CTGCGGCAGGAGCTCTGCCCAGGGAAAGAGTACTTT...GCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS TCA 90 bp | CCCTGCTGGCTCTCGAGCTCTCCGTCGTGGGATCTCTCCTTCGCTTaGCAGAAACATCCCAGGGGCTTCTCCTCCCACTCTGGGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCWLSSSPSWDLSFA*QKHPRGFSSHSGSP Trigger: GGGAGACCCAGAGTGGGAGGAGAAGCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATCCCACGACGGAGAGCTCGAGAGCCAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||
| CDS CCA 90 bp | GTTCTGAGAGGCAGAGGAAGTGAAGCCAGTCCTCCGGCCCATCACTaGGCCACATCCACTGGCCCTCATGGCCATCATCCCTACCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLRGRGSEASPPAHH*ATSTGPHGHHPYHG Trigger: ACCATGGTAGGGATGATGGCCATGAGGGCCAGTGGATGTGGCCCAGTGATGGGCCGGAGGACTGGCTTCACTTCCTCTGCCTCTCAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTCCCTGGAACAGAGCCAGCCTCCATCATTTGCTGTaGCTTCCTGGCCTGAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: WCCRQGPVRPLGPWNRASLHHLL*LPGLSA Trigger: CGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAG...GCTGGCTCTGTTCCAGGGACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCGGACAATCGGATCTGTaGCAGCTCACTCTGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CVMTVYPAAGPALRTSPSGQSDL*QLTLGL Trigger: CAGTCCCAGAGTGAGCTGCAACAGATCCGATTGTCC...GGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTATCCTCCATGGCTGCTaGAAACTGGGGCCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRDCVQWCCRQGPVRPLGILHGC*KLGPED Trigger: GTCCTCTGGCCCCAGTTTCAAGCAGCCATGGAGGAT...ACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CAA 90 bp | CGGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCCCGGATGTCCTTCTaGAGGTTCAGGAGCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RNIPSVACLSPSFAVASWPRMSF*RFRSPV Trigger: CACCGGGCTCCTGAACCTCAAGAAGGACATCCGGGG...CCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGACTGTATATCCAGCTGCAGGCCCAGCCCTCAGGACTAGCCCCTCCTCCGCCTTTCTCCATCATTaGCTGTTGCTTCCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VMTVYPAAGPALRTSPSSAFLHH*LLLPGL Trigger: CAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGC...GGAGGAGGGGCTAGTCCTGAGGGCTGGGCCTGCAGCTGGATATACAGTCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGACTGTGTGCAGTGGTGCTGTAGGCAAGGACCAGTAAGGCCCTTGGGTGGACAATCGGATCTGTaGCAGCTCACTCTGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GRDCVQWCCRQGPVRPLGGQSDL*QLTLGL Trigger: CAGTCCCAGAGTGAGCTGCAACAGATCCGATTGTCC...ACCCAAGGGCCTTACTGGTCCTTGCCTACAGCACCACTGCACACAGTCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231369.2 ENSMUST00000231965.2 |
||
| CDS-3UTR CAA 90 bp | CGGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGATCCTCCATGGCTGCTaGAAACTGGGGCCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNIPSVACLSPSFAVASWILHGC*KLGPED Trigger: GTCCTCTGGCCCCAGTTTCAAGCAGCCATGGAGGAT...CCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231965.2 |
||
| CDS CCA 72 bp | GGCAGAGGAAGTGAAGCCAGTCCTCCGGCCCATCACTaGGCCACATCCACTGGCCCTCATGGCCATCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGSEASPPAHH*ATSTGPHGHHP Trigger: GGGATGATGGCCATGAGGGCCAGTGGATGTGGCCCAGTGATGGGCCGGAGGACTGGCTTCACTTCCTCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167061.2 ENSMUST00000231369.2 |
||
| CDS CAA 90 bp | CCCCTGCTGGCTCTCGAGCTCTCCGTCGTGGGATCTCTCCTTCGCTaGACAGAAACATCCCAGGGGCTTCTCCTCCCACTCTGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLLALELSVVGSLLR*TETSQGLLLPLWVS Trigger: GGAGACCCAGAGTGGGAGGAGAAGCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATCCCACGACGGAGAGCTCGAGAGCCAGCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||
| CDS TCA 72 bp | CCAGCAGCCTCCATCATTTGCTGTTGCTTCCTGGCCTaGGTGCGGCAATGGGCCCTCTCCCCCAGTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAASIICCCFLA*VRQWALSPSIS Trigger: GGAGATACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGGCTGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231860.2 |
||
| CDS CCA 72 bp | CACATCCACTGGCCCTCATGGCCATCATCCCTACCATaGTCCTCTGACGACCTACCAGGAGCCCGGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HIHWPSWPSSLP*SSDDLPGARWL Trigger: AAGCCACCGGGCTCCTGGTAGGTCGTCAGAGGACCATGGTAGGGATGATGGCCATGAGGGCCAGTGGATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167061.2 ENSMUST00000231369.2 |
||
| CDS CCA 72 bp | TCCGGCCCATCACTGGGCCACATCCACTGGCCCTCATaGCCATCATCCCTACCATGGTCCTCTGACGACCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGPSLGHIHWPS*PSSLPWSSDDL Trigger: TAGGTCGTCAGAGGACCATGGTAGGGATGATGGCCATGAGGGCCAGTGGATGTGGCCCAGTGATGGGCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167061.2 ENSMUST00000231369.2 |
||
| CDS CCA 72 bp | CAAGGCCAGCAGCCTCCATCATTTGCTGTTGCTTCCTaGCCTGAGTGCGGCAATGGGCCCTCTCCCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QGQQPPSFAVAS*PECGNGPSPPV Trigger: TACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGGCTGCTGGCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231860.2 |
||
| CDS GCA 72 bp | CAGCCTCCATCATTTGCTGTTGCTTCCTGGCCTGAGTaGGGCAATGGGCCCTCTCCCCCAGTATCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPSFAVASWPE*GNGPSPPVSPA Trigger: AGCTGGAGATACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231860.2 |
||
| CDS CAA 72 bp | GCTCTCGAGCTCTCCGTCGTGGGATCTCTCCTTCGCTaGACAGAAACATCCCAGGGGCTTCTCCTCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ALELSVVGSLLR*TETSQGLLLPL Trigger: GAGTGGGAGGAGAAGCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATCCCACGACGGAGAGCTCGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||
| CDS CAA 90 bp | CTCGGAACATCCCATCTGTGGCCTGCCTTTCTCCATCATTTGCTGTaGCTTCCTGGCCTGAGTGCGGCAATGGGCCCTCTCCCCCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LGTSHLWPAFLHHLL*LPGLSAAMGPLPQY Trigger: ATACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAGGCCACAGATGGGATGTTCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS TCA 72 bp | CTCTCGAGCTCTCCGTCGTGGGATCTCTCCTTCGCTTaGCAGAAACATCCCAGGGGCTTCTCCTCCCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSPSWDLSFA*QKHPRGFSSHS Trigger: AGAGTGGGAGGAGAAGCCCCTGGGATGTTTCTGTCAAGCGAAGGAGAGATCCCACGACGGAGAGCTCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||
| CDS TCA 72 bp | CTGCCTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTaGGTGCGGCAATGGGCCCTCTCCCCCAGTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPFSIICCCFLA*VRQWALSPSIS Trigger: GGAGATACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS GCA 72 bp | CTTTCTCCATCATTTGCTGTTGCTTCCTGGCCTGAGTaGGGCAATGGGCCCTCTCCCCCAGTATCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPSFAVASWPE*GNGPSPPVSPA Trigger: AGCTGGAGATACTGGGGGAGAGGGCCCATTGCCGCACTCAGGCCAGGAAGCAACAGCAAATGATGGAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231369.2 |
||
| CDS TCA 72 bp | AGAAAGGATTGTTCTGCAGACCCCAGTGTCCTGCCCTaGAGCTGTGTGGGAGCTGGTCTAGATGAAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKDCSADPSVLP*SCVGAGLDEAV Trigger: CACAGCTTCATCTAGACCAGCTCCCACACAGCTTCAGGGCAGGACACTGGGGTCTGCAGAACAATCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167061.2 ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||
| CDS CCA 72 bp | GAGCTGGGAAAGGTCTGGAAGACTCTAATGACTGAGTaGACTGAAGGGGGACCAGACAGGGACACCTTACAA | + |
|
Preference number: 6 (lower is better) Translates to: ELGKVWKTLMTE*TEGGPDRDTLQ Trigger: TTGTAAGGTGTCCCTGTCTGGTCCCCCTTCAGTCCACTCAGTCATTAGAGTCTTCCAGACCTTTCCCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000231369.2 ENSMUST00000231860.2 ENSMUST00000231965.2 |
||