Pregenerated sensors for CCDC186 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035173Ensembl transcript IDs: ENSMUST00000076085.4, ENSMUST00000118592.8, ENSMUST00000135666.8
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGGCTCGTCTGTAATACTCTCCTGCCGTCACCTCCTGAGGGCTaGGATGATGGGCATGAGCGGCCATGCCAGGCTAGAGCTCATACC | + |
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Preference number: 1 (lower is better) Translates to: SRLVCNTLLPSPPEG*DDGHERPCQARAHT Trigger: GGTATGAGCTCTAGCCTGGCATGGCCGCTCATGCCCATCATCCCAGCCCTCAGGAGGTGACGGCAGGAGAGTATTACAGACGAGCCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 90 bp | GCATCTGCATTTCACTGTGCTCAAGGCTCGTCTGTAATACTCTCCTaGCGTCACCTCCTGAGGGCTGGGATGATGGGCATGAGCGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: ASAFHCAQGSSVILS*RHLLRAGMMGMSGH Trigger: ATGGCCGCTCATGCCCATCATCCCAGCCCTCAGGAGGTGACGGCAGGAGAGTATTACAGACGAGCCTTGAGCACAGTGAAATGCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 90 bp | CACAGTGTAATCAACCCAGGGTTCCCTACACAACGCAGACAGCCCTaGACTCGGGAAGGGAAGAGAGCAGCAGGCATGAATGATAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: HSVINPGFPTQRRQP*TREGKRAAGMNDSH Trigger: ATGGCTATCATTCATGCCTGCTGCTCTCTTCCCTTCCCGAGTGCAGGGCTGTCTGCGTTGTGTAGGGAACCCTGGGTTGATTACACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR CCA 90 bp | ACCAACAGCCTGTACAAGGGACTTCAGAAGGCTGCCCGACTGGATTaGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTA | + |
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Preference number: 1 (lower is better) Translates to: TNSLYKGLQKAARLD*THFRSTEQAPVKRL Trigger: TAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAGTCGGGCAGCCTTCTGAAGTCCCTTGTACAGGCTGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 90 bp | GATCATACAGAAACAGCACTTGAGGAAACTGAGCATCTCCTGATGTaGTGGGCACACAGGAGCCTCCGCCCAAGCCCTTTACATTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: DHTETALEETEHLLM*WAHRSLRPSPLHSP Trigger: AGGGGAATGTAAAGGGCTTGGGCGGAGGCTCCTGTGTGCCCATCACATCAGGAGATGCTCAGTTTCCTCAAGTGCTGTTTCTGTATGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 90 bp | CGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCACAGGCTaGTGTCACTGCTGCTCTGTGGCTCGGCTGTCTACTAGGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: RLHDERLSLGRLFTG*CHCCSVARLSTRQE Trigger: TTCTTGCCTAGTAGACAGCCGAGCCACAGAGCAGCAGTGACATCAGCCTGTGAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135666.8 |
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| 3UTR GCA 90 bp | AAATTCTATGATAGTCCAGGCTTCCAAGGCATCTGCATTTCACTGTaGTCAAGGCTCGTCTGTAATACTCTCCTGCCGTCACCTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: KFYDSPGFQGICISL*SRLVCNTLLPSPPE Trigger: CTCAGGAGGTGACGGCAGGAGAGTATTACAGACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATCATAGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 90 bp | CACTCACTTTCAGATGAAAGCCAGGGAAGTGTGTGGACCCACACATaGACGCACACCAACTTCTTGCCCAAGGATACCAAAATATTACTA | + |
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Preference number: 1 (lower is better) Translates to: HSLSDESQGSVWTHT*THTNFLPKDTKILL Trigger: TAGTAATATTTTGGTATCCTTGGGCAAGAAGTTGGTGTGCGTGCATGTGTGGGTCCACACACTTCCCTGGCTTTCATCTGAAAGTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 90 bp | GGCGGCACAAGTGCTAACACAGTTTGTCCCATTCTATACCAAATGTaGATATATGTTACGAGTGCCCAGGTACAGAATACTGTGGACATG | + |
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Preference number: 1 (lower is better) Translates to: GGTSANTVCPILYQM*IYVTSAQVQNTVDM Trigger: CATGTCCACAGTATTCTGTACCTGGGCACTCGTAACATATATGCACATTTGGTATAGAATGGGACAAACTGTGTTAGCACTTGTGCCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 90 bp | CACAGTTTGTCCCATTCTATACCAAATGTGCATATATGTTACGAGTaGCCAGGTACAGAATACTGTGGACATGATCACTGGTTGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: HSLSHSIPNVHICYE*PGTEYCGHDHWLVS Trigger: GGAGACCAACCAGTGATCATGTCCACAGTATTCTGTACCTGGGCACTCGTAACATATATGCACATTTGGTATAGAATGGGACAAACTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 90 bp | CTCTTGGACATAAATGCATTTCTTACACATGCTTTTGCTCAGTCTTaGCCATATATGAAAGGACATAGGAGATGCCTAATGAAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLDINAFLTHAFAQS*PYMKGHRRCLMKKK Trigger: TTTCTTTTTCATTAGGCATCTCCTATGTCCTTTCATATATGGTCAAGACTGAGCAAAAGCATGTGTAAGAAATGCATTTATGTCCAAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR GCA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCCTGGACAGTGGCACCTaGTGCTCTGTGGCTCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTLDSGT*CSVARL Trigger: CAGCCGAGCCACAGAGCAGCAGGTGCCACTGTCCAG...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR CAA 90 bp | AACCAACAGCCTGTACAAGGGACTTCAGAAGGCTGCCCGACTGGATaGGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: NQQPVQGTSEGCPTG*DSFQEHGTGTSQAV Trigger: AACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAGTCGGGCAGCCTTCTGAAGTCCCTTGTACAGGCTGTTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR TCA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGAAAGCAGGGACTGTTTaGGGACACTGGACAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: HELKRSSLAFEVARPTGVKAGTV*GHWTVA Trigger: TGCCACTGTCCAGTGTCCTCAAACAGTCCCTGCTTT...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGAAATGCTAAAGAGGACACTGGACAGTaGCACCTGCTGCTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: THFRSTEQAPVKRLRNAKEDTGQ*HLLLCG Trigger: GCCACAGAGCAGCAGGTGCCACTGTCCAGTGTCCTC...TTTAGCATTTCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGAGACAGTGGCACCTGCTaGTCTGTGGCTCGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LCCENGERLHDERLSLGRDSGTC*SVARLS Trigger: AGACAGCCGAGCCACAGAGCAGCAGGTGCCACTGTC...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATTGGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGATGGCTCATCTACCTGTaGAAGCAGAACAGCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LDWTHFRSTEQAPVKRLRWLIYL*KQNSTL Trigger: AAGAGTGCTGTTCTGCTTGCACAGGTAGATGAGCCA...TCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGAGAAGAACCTCAGAAACAAATCTACCCCAGGAGCGCGCCCTAAGTCAGGAGTTAGTGACAAGGTaGCTGACTGCAGCACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: MRRRTSETNLPQERALSQELVTR*LTAAQR Trigger: TCTCTGTGCTGCAGTCAGCCACCTTGTCACTAACTC...CTGACTTAGGGCGCGCTCCTGGGGTAGATTTGTTTCTGAGGTTCTTCTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTGGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGACTGGCTTTGAACTCATaGGCTCAAGAGATCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LDWTHFRSTEQAPVKRLRLALNS*AQEILF Trigger: AAAGAGGATCTCTTGAGCTCATGAGTTCAAAGCCAG...TCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR TCA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGTGCAGCACAGAGAAATaGGAAATGATCTTTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HELKRSSLAFEVARPTGVCSTEK*EMIFAE Trigger: CTCAGCAAAGATCATTTCTCATTTCTCTGTGCTGCA...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGAGAAGAACCTCAGAAACAAATCTACCCCAGGAGCGCGCCCTAAGTCAGATCTGCATTTCACTGTaGTCAAGGCTCGTCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: MRRRTSETNLPQERALSQICISL*SRLVCN Trigger: ATTACAGACGAGCCTTGAGCACAGTGAAATGCAGAT...CTGACTTAGGGCGCGCTCCTGGGGTAGATTTGTTTCTGAGGTTCTTCTCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CCA 90 bp | TATGATAGTCCAGGCTTCCAAGGCATCTGCATTTCACTGTGCTCAAGGCTCGTCCTAAGGAAAGGACGGTaGTTACCTTGTTTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YDSPGFQGICISLCSRLVLRKGR*LPCLFV Trigger: AACAAACAAACAAGGTAACCACCGTCCTTTCCTTAG...GACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTAAATTATTACATTATTAAGTTCTCCAAGTCCATGGCGGCACAAGTGCTATCACCTCCTGAGGGCTaGGATGATGGGCATGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: LLNYYIIKFSKSMAAQVLSPPEG*DDGHER Trigger: CCGCTCATGCCCATCATCCCAGCCCTCAGGAGGTGA...TAGCACTTGTGCCGCCATGGACTTGGAGAACTTAATAATGTAATAATTTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATAGTCCCAAAGCATGAATGTCATTTTATATATATCCTTACCAGGGCAACAGAGCATCTCCTGATGTaGTGGGCACACAGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SIVPKHECHFIYILTRATEHLLM*WAHRSL Trigger: GAGGCTCCTGTGTGCCCATCACATCAGGAGATGCTC...TGTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR GCA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCATTCTATACCAAATGTaGATATATGTTACGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTILYQM*IYVTSA Trigger: GGCACTCGTAACATATATGCACATTTGGTATAGAAT...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATAGTCCCAAAGCATGAATGTCATTTTATATATATCCTTACCAGGGCAACAGCACTCACTTTCAGATaGAAGCCAGGGAAGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SIVPKHECHFIYILTRATALTFR*KPGKCV Trigger: CACACACTTCCCTGGCTTTCATCTGAAAGTGAGTGC...TGTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR CCA 72 bp | GTCTGTAATACTCTCCTGCCGTCACCTCCTGAGGGCTaGGATGATGGGCATGAGCGGCCATGCCAGGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: VCNTLLPSPPEG*DDGHERPCQAR Trigger: TCTAGCCTGGCATGGCCGCTCATGCCCATCATCCCAGCCCTCAGGAGGTGACGGCAGGAGAGTATTACAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | ATCAACCCAGGGTTCCCTACACAACGCAGACAGCCCTaGACTCGGGAAGGGAAGAGAGCAGCAGGCATGAAT | + |
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Preference number: 3 (lower is better) Translates to: INPGFPTQRRQP*TREGKRAAGMN Trigger: ATTCATGCCTGCTGCTCTCTTCCCTTCCCGAGTGCAGGGCTGTCTGCGTTGTGTAGGGAACCCTGGGTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | AGGGACTGTTTGAGGACACTGGACAGTGGCACCTGCTaGTCTGTGGCTCGGCTGTCTACTAGGCAAGAACTT | + |
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Preference number: 3 (lower is better) Translates to: RDCLRTLDSGTC*SVARLSTRQEL Trigger: AAGTTCTTGCCTAGTAGACAGCCGAGCCACAGAGCAGCAGGTGCCACTGTCCAGTGTCCTCAAACAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | TTTCACTGTGCTCAAGGCTCGTCTGTAATACTCTCCTaGCGTCACCTCCTGAGGGCTGGGATGATGGGCATG | + |
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Preference number: 3 (lower is better) Translates to: FHCAQGSSVILS*RHLLRAGMMGM Trigger: CATGCCCATCATCCCAGCCCTCAGGAGGTGACGGCAGGAGAGTATTACAGACGAGCCTTGAGCACAGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR CCA 72 bp | TCTAGTGTCTTCTTACAGTCTTTGGGCAGAGCACCATaGGAACAGCACTTTCCCCAGGCCCGAGCTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSVFLQSLGRAP*EQHFPQARAQA Trigger: AGCCTGAGCTCGGGCCTGGGGAAAGTGCTGTTCCCATGGTGCTCTGCCCAAAGACTGTAAGAAGACACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 72 bp | GAAACAGCACTTGAGGAAACTGAGCATCTCCTGATGTaGTGGGCACACAGGAGCCTCCGCCCAAGCCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: ETALEETEHLLM*WAHRSLRPSPL Trigger: TAAAGGGCTTGGGCGGAGGCTCCTGTGTGCCCATCACATCAGGAGATGCTCAGTTTCCTCAAGTGCTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 72 bp | ATACAGAAACAGCACTTGAGGAAACTGAGCATCTCCTaGTGTGATGGGCACACAGGAGCCTCCGCCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: IQKQHLRKLSIS*CDGHTGASAQA Trigger: GGCTTGGGCGGAGGCTCCTGTGTGCCCATCACATCAGGAGATGCTCAGTTTCCTCAAGTGCTGTTTCTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGATTGGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGAGTCTTCTTACAGTCTTaGGGCAGAGCACCATGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LDWTHFRSTEQAPVKRLRVFLQS*GRAPWE Trigger: TTCCCATGGTGCTCTGCCCAAAGACTGTAAGAAGAC...TCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | GATAGTCCAGGCTTCCAAGGCATCTGCATTTCACTGTaGTCAAGGCTCGTCTGTAATACTCTCCTGCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: DSPGFQGICISL*SRLVCNTLLPS Trigger: TGACGGCAGGAGAGTATTACAGACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | TCAGATGAAAGCCAGGGAAGTGTGTGGACCCACACATaGACGCACACCAACTTCTTGCCCAAGGATACCAAA | + |
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Preference number: 3 (lower is better) Translates to: SDESQGSVWTHT*THTNFLPKDTK Trigger: TTTGGTATCCTTGGGCAAGAAGTTGGTGTGCGTGCATGTGTGGGTCCACACACTTCCCTGGCTTTCATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | AATAACCAACAGCCTGTACAAGGGACTTCAGAAGGCTaGCCGACTGGATTGGACTCATTTCAGGAGCACGGA | + |
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Preference number: 3 (lower is better) Translates to: NNQQPVQGTSEG*PTGLDSFQEHG Trigger: TCCGTGCTCCTGAAATGAGTCCAATCCAGTCGGGCAGCCTTCTGAAGTCCCTTGTACAGGCTGTTGGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 72 bp | CACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATaGGGAGAAGAACCTCAGAAACAAATCTACCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HCRLRVSPPRIL*GEEPQKQIYPR Trigger: CCTGGGGTAGATTTGTTTCTGAGGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CAA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGCCTCTAGATTTCTCTTaGTGTTGCGAAAATGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: HELKRSSLAFEVARPTGVPLDFS*CCENGE Trigger: CTCACCATTTTCGCAACACAAAGAGAAATCTAGAGG...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR CCA 72 bp | CGAAATGCTAAAAGTCTAGTGTCTTCTTACAGTCTTTaGGCAGAGCACCATGGGAACAGCACTTTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RNAKSLVSSYSL*AEHHGNSTFPR Trigger: CCTGGGGAAAGTGCTGTTCCCATGGTGCTCTGCCCAAAGACTGTAAGAAGACACTAGACTTTTAGCATTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | ATATACCTATGTCATATAAGGAGACCTGACAAACAGTaGCCAGCCAGGGCTAATTCCCTACAGCCAGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: IYLCHIRRPDKQ*PARANSLQPAF Trigger: GAAAGCTGGCTGTAGGGAATTAGCCCTGGCTGGGCACTGTTTGTCAGGTCTCCTTATATGACATAGGTATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CAA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTAGCTTTCCTGTCTATTaGTCAGTAAACTCAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: YTMSVKPRHGRKHLSPRASFPVY*SVNSEL Trigger: CAGTTCTGAGTTTACTGACAAATAGACAGGAAAGCT...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CAA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCTCAGTGGAGGTTCTCTaGGACATAAATGCATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTSVEVL*DINAFL Trigger: AAGAAATGCATTTATGTCCAAGAGAACCTCCACTGA...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 72 bp | ATGTTACGAGTGCCCAGGTACAGAATACTGTGGACATaGTCACTGGTTGGTCTCCACTATGCATTTTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: MLRVPRYRILWT*SLVGLHYAFSC Trigger: ACACGAAAATGCATAGTGGAGACCAACCAGTGATCATGTCCACAGTATTCTGTACCTGGGCACTCGTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR TCA 72 bp | AAGGGCACCTCTACACAGGGAAGCAAAACCAATTTTTaGTTAGTTGACACAAAGCAGGGACTGTTTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: KGTSTQGSKTNF*LVDTKQGLFED Trigger: GTCCTCAAACAGTCCCTGCTTTGTGTCAACTAATCAAAAATTGGTTTTGCTTCCCTGTGTAGAGGTGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | GCAAAATTCTATGATAGTCCAGGCTTCCAAGGCATCTaGATTTCACTGTGCTCAAGGCTCGTCTGTAATACT | + |
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Preference number: 3 (lower is better) Translates to: AKFYDSPGFQGI*ISLCSRLVCNT Trigger: AGTATTACAGACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATCATAGAATTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | TCCCATTCTATACCAAATGTGCATATATGTTACGAGTaGCCAGGTACAGAATACTGTGGACATGATCACTGG | + |
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Preference number: 3 (lower is better) Translates to: SHSIPNVHICYE*PGTEYCGHDHW Trigger: CCAGTGATCATGTCCACAGTATTCTGTACCTGGGCACTCGTAACATATATGCACATTTGGTATAGAATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTATACAGAAACAGCACTaGAGGAAACTGAGCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: RLELIPFFKAMYPKAQVLIQKQH*RKLSIS Trigger: GGAGATGCTCAGTTTCCTCAAGTGCTGTTTCTGTAT...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
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| 3UTR GCA 72 bp | AGTGCTAACACAGTTTGTCCCATTCTATACCAAATGTaGATATATGTTACGAGTGCCCAGGTACAGAATACT | + |
|
Preference number: 3 (lower is better) Translates to: SANTVCPILYQM*IYVTSAQVQNT Trigger: AGTATTCTGTACCTGGGCACTCGTAACATATATGCACATTTGGTATAGAATGGGACAAACTGTGTTAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR TCA 72 bp | ACAAGATACACAATTCAGCTCCAAAGTCCCTTCGGCTaGAGACATAACTGTGTTAAAGATCATACAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: TRYTIQLQSPFG*RHNCVKDHTET Trigger: TGTTTCTGTATGATCTTTAACACAGTTATGTCTTCAGCCGAAGGGACTTTGGAGCTGAATTGTGTATCTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR CCA 72 bp | ACTTTTCACAGGCTGATGTCACTAAGGAAAGGACGGTaGTTACCTTGTTTGTTTGTTTGTTTGTTTTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TFHRLMSLRKGR*LPCLFVCLFLN Trigger: GTTTAAAAACAAACAAACAAACAAACAAGGTAACCACCGTCCTTTCCTTAGTGACATCAGCCTGTGAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR TCA 72 bp | GAAAAAGAGATCAGTAGAGTCAATAGTCCCAAAGCATaGATGTCATTTTATATATATCCTTACCAGGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: EKEISRVNSPKA*MSFYIYPYQGN Trigger: GTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGACTCTACTGATCTCTTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGCCATTTGGGACTTGGTaGCCCTCTGCAAACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HELKRSSLAFEVARPTGVPFGTW*PSANSA Trigger: TGCTGAGTTTGCAGAGGGCCACCAAGTCCCAAATGG...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTTGCTGGCACTGGCTTTaGAGCTGGCTCTCAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: YTMSVKPRHGRKHLSPRACWHWL*SWLSVQ Trigger: CTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCA...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAGAAGAACCTCAGAAACAAATCTACCCCAGGAGCGCGCCCTAAGTCAGCTTCACATTTCTTATTaGCCTGGTCCATCCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRRRTSETNLPQERALSQLHISY*PGPSAG Trigger: CCCAGCGGATGGACCAGGCCAATAAGAAATGTGAAG...CTGACTTAGGGCGCGCTCCTGGGGTAGATTTGTTTCTGAGGTTCTTCTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCTTAGCCTGTCCCATCTaGTGGCACTGGCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CENGERLHDERLSLGRLFLACPI*WHWLCS Trigger: GCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAA...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGCTCTGCTCCAGTTCATaGTGGTGTTTAATAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HELKRSSLAFEVARPTGVLCSSS*WCLIRR Trigger: ACGCCTTATTAAACACCAGCATGAACTGGAGCAGAG...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCCAGCCACCGAGGAGCTaGTATTCTCTGGAGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CENGERLHDERLSLGRLFQPPRS*YSLEIG Trigger: ACCGATCTCCAGAGAATACCAGCTCCTCGGTGGCTG...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCACAGTGAGCTCCTGCTaGAAGTACCTGCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CENGERLHDERLSLGRLFTVSSC*KYLLCT Trigger: TGTGCACAGCAGGTACTTGCAGCAGGAGCTCACTGT...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCACAGGCGCTTTCTTCGTCCTCTaGTCCAGTTCATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGERLHDERLSLGRLFTGAFFVL*SSSCWC Trigger: ACACCAGCATGAACTGGAGCAGAGGACGAAGAAAGC...GCCTGTGAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTACAGCCACCGAGGAGCTaGTATTCTCTGGAGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLQPPRS*YSLEIG Trigger: ACCGATCTCCAGAGAATACCAGCTCCTCGGTGGCTG...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR TCA 90 bp | ACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGAAATGCTAAACTGTCTCTGACATGCTaGCTGGCACCAATTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: THFRSTEQAPVKRLRNAKLSLTC*LAPIHF Trigger: AAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAG...TTTAGCATTTCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGCTGAGCTCACAAAGCTCACGGCACACACACCACACACCCATTCATAAAGAAGCTCTTCCTCTTTaGGCAACTTGCTCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSSQSSRHTHHTPIHKEALPL*ATCSPD Trigger: ATCTGGAGAGCAAGTTGCTCAAAGAGGAAGAGCTTC...TTTATGAATGGGTGTGTGGTGTGTGTGCCGTGAGCTTTGTGAGCTCAGCAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTGCGTGTTTGCGCCTCTaGGTCACTAACTCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCENGERLHDERLSLGRLACLRL*VTNSSF Trigger: GAAAGATGAGTTAGTGACGCAGAGGCGCAAACACGC...AAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGAGCTTTCTTCGTCCTCTaGTCCAGTTCATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCCENGERLHDERLSLGRAFFVL*SSSCWC Trigger: ACACCAGCATGAACTGGAGCAGAGGACGAAGAAAGC...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGCTTTGTCCACTTCTaGGAAGTTGTCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLGFVHF*EVVHSH Trigger: GTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCC...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR TCA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTTCCTGTGCGACTAGCTaGTCTTTGGAAGCTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: YTMSVKPRHGRKHLSPRASCATS*SLEALI Trigger: AATTAAAGCTTCCAAAGATCAGCTAGTCGCACAGGA...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | TATGATAGTCCAGGCTTCCAAGGCATCTGCATTTCACTGTGCTCAAGGCTCGTCAGCTGCTCATGTAACTaGTCTGTGATTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YDSPGFQGICISLCSRLVSCSCN*SVIFTL Trigger: CAAGGTGAAAATCACAGATCAGTTACATGAGCAGCT...GACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | ACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGAAATGCTAAAATACTTCATTACCATTaGCTCCTTTTCCTGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THFRSTEQAPVKRLRNAKILHYH*LLFLTG Trigger: GCCCGTCAGGAAAAGGAGGCAATGGTAATGAAGTAT...TTTAGCATTTCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCTTTCCATTCTCAGTCTaGTCTAACTTTCTCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTFPFSV*SNFLRA Trigger: AGCTCGGAGAAAGTTAGAGCAGACTGAGAATGGAAA...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATTGGACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGACCGCGTCTACTCAAATaGACTTTGTTAAAATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDWTHFRSTEQAPVKRLRPRLLK*TLLKSD Trigger: ATCTGATTTTAACAAAGTGCATTTGAGTAGACGCGG...TCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGTCCAATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTGCTTCCTCCTTTGCCTaGGTTAGTTTTGTAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTMSVKPRHGRKHLSPRAASSFA*VSFVVV Trigger: AACAACTACAAAACTAACCCAGGCAAAGGAGGAAGC...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | TATGATAGTCCAGGCTTCCAAGGCATCTGCATTTCACTGTGCTCAAGGCTCGTCCATGTAACTGATCTGTaGTTTTCACCTTGTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YDSPGFQGICISLCSRLVHVTDL*FSPCPV Trigger: TACTGGACAAGGTGAAAATCACAGATCAGTTACATG...GACGAGCCTTGAGCACAGTGAAATGCAGATGCCTTGGAAGCCTGGACTATCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | AATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCACAGGCCCTGTAATTTTCGGTTaGTTTCCAAAGAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGERLHDERLSLGRLFTGPVIFG*FPKRAP Trigger: TGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGG...GCCTGTGAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | TCAATAGTCCCAAAGCATGAATGTCATTTTATATATATCCTTACCAGGGCAACAGACAGGTTGTCCACCTaGGACTGCAGAGCGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIVPKHECHFIYILTRATDRLST*DCRALD Trigger: GTCCAGCGCTCTGCAGTCCCAGGTGGACAACCTGTC...TGTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTCCTGTTTCTAATCTaGTGCTTTCGTCACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCCENGERLHDERLSLGRLLFLI*CFRHQK Trigger: TTTCTGGTGACGAAAGCAGCAGATTAGAAACAGGAG...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTACTCTGCTCCAGTTCATaGTGGTGTTTAATAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLLCSSS*WCLIRR Trigger: ACGCCTTATTAAACACCAGCATGAACTGGAGCAGAG...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTGGCTTTGTCCACTTCTaGGAAGTTGTCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLELIPFFKAMYPKAQVLGFVHF*EVVHSH Trigger: GTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCC...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCTGCTCCAGTTCATGCTaGTGTTTAATAAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CENGERLHDERLSLGRLFCSSSC*CLIRRS Trigger: AGAACGCCTTATTAAACACCAGCATGAACTGGAGCA...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTTTAACAGTGAGCTCCTaGTGCAAGTACCTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLELIPFFKAMYPKAQVLLTVSS*CKYLLC Trigger: GCACAGCAGGTACTTGCAGCAGGAGCTCACTGTTAA...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTATGGATTTGCTGAATTaGATTTTTAGCTGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: YTMSVKPRHGRKHLSPRAMDLLN*IFSCDI Trigger: GATGTCACAGCTAAAAATGCAATTCAGCAAATCCAT...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTATCTGTTCTGGCTCCTTaGTTTTTGACACTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLSVLAP*FLTLVL Trigger: CAGAACAAGTGTCAAAAACCAAGGAGCCAGAACAGA...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTACTAGCTCCTTTATTTTaGCATGATGCATCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLLAPLF*HDASPA Trigger: AGCTGGAGATGCATCATGCCAAAATAAAGGAGCTAG...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTAATGTCTTTATCGTaGTTTCCATTCTCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCCENGERLHDERLSLGRLMSLS*FPFSVC Trigger: GCAGACTGAGAATGGAAACCACGATAAAGACATTAG...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGAACCAGCTGTTTGATGTaGTCCTCCATGAATTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LCCENGERLHDERLSLGRTSCLM*SSMNSI Trigger: AATAGAATTCATGGAGGACCACATCAAACAGCTGGT...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTATGCTCCAGTTCATGCTaGTGTTTAATAAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCCENGERLHDERLSLCSSSC*CLIRRS Trigger: AGAACGCCTTATTAAACACCAGCATGAACTGGAGCA...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| 3UTR CAA 72 bp | CTAGATTTCTCTTTGTGTTGCGAAAATGGTGAGCGGTaGCATGATGAACGCCTCTCTTTAGGAAGACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSLCCENGER*HDERLSLGRLF Trigger: GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAAATCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| 3UTR CAA 72 bp | ATGGAGAAACCAAACCAAACCACCACCAACTGTTCATaGTGTCCAAACGCACCATGTTCAAGCCTTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MEKPNQTTTNCS*CPNAPCSSLEN Trigger: ATTTTCAAGGCTTGAACATGGTGCGTTTGGACACAATGAACAGTTGGTGGTGGTTTGGTTTGGTTTCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACCGCGTCTACTCAAATaGACTTTGTTAAAATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCCENGERLHDERLSLGRPRLLK*TLLKSD Trigger: ATCTGATTTTAACAAAGTGCATTTGAGTAGACGCGG...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR TCA 90 bp | TCAATAGTCCCAAAGCATGAATGTCATTTTATATATATCCTTACCAGGGCAACAAGCCGCCCTTTCTCCTaGGACAGCTGCTTAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIVPKHECHFIYILTRATSRPFS*DSCLIL Trigger: CAAAATTAAGCAGCTGTCTCAGGAGAAAGGGCGGCT...TGTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTAAGAATTCTCACCACTaGCACAGTCTGGAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLELIPFFKAMYPKAQVLKNSHH*HSLEYG Trigger: GCCATATTCCAGACTGTGGCAGTGGTGAGAATTCTT...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCGCTTTTAACTTGTTTTaGGCCCACTTTACTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: CENGERLHDERLSLGRLFAFNLF*AHFTLM Trigger: CATTAAAGTAAAGTGGGCGCAAAACAAGTTAAAAGC...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTCCTGTAATTTTCGGTTaGTTTCCAAAGAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLELIPFFKAMYPKAQVLPVIFG*FPKRAP Trigger: TGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGG...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR GCA 90 bp | TTTATAATTCCTCTAGATTTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATCAGACTCCCTTTTCCTaGTGCCTTCAATGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIIPLDFSLCCENGERLHQTPFS*CLQCLS Trigger: AGAAAGACATTGAAGGCAGCAGGAAAAGGGAGTCTG...ATGCAACCGCTCACCATTTTCGCAACACAAAGAGAAATCTAGAGGAATTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR CAA 72 bp | CAGGCTGATGTCACTAAGGAAAGGACGGTGGTTACCTaGTTTGTTTGTTTGTTTGTTTTTAAACCCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QADVTKERTVVT*FVCLFVFKPLY Trigger: GTACAAGGGTTTAAAAACAAACAAACAAACAAACAAGGTAACCACCGTCCTTTCCTTAGTGACATCAGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR CAA 72 bp | ACTGTTCATTGTGTCCAAACGCACCATGTTCAAGCCTaGAAAATGAACAGACTCAAAAATCTCAAGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVHCVQTHHVQA*KMNRLKNLKWD Trigger: ATCCCACTTGAGATTTTTGAGTCTGTTCATTTTCAAGGCTTGAACATGGTGCGTTTGGACACAATGAACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR TCA 90 bp | TCAATAGTCCCAAAGCATGAATGTCATTTTATATATATCCTTACCAGGGCAACATCCTTTATTTTGGCATaGTGCATCTCCAGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIVPKHECHFIYILTRATSFILA*CISSWS Trigger: TGACCAGCTGGAGATGCATCATGCCAAAATAAAGGA...TGTTGCCCTGGTAAGGATATATATAAAATGACATTCATGCTTTGGGACTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| 3UTR CAA 72 bp | GAACCGAAAACCTTTATAATTCCTCTAGATTTCTCTTaGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPKTFIIPLDFS*CCENGERLHDE Trigger: TTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAAATCTAGAGGAATTATAAAGGTTTTCGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CCA 90 bp | TTTATAATTCCTCTAGATTTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATCTAATGTCTTTATCGTaGTTTCCATTCTCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIPLDFSLCCENGERLHLMSLS*FPFSVC Trigger: GCAGACTGAGAATGGAAACCACGATAAAGACATTAG...ATGCAACCGCTCACCATTTTCGCAACACAAAGAGAAATCTAGAGGAATTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTAAATTATTACATTATTAAGTTCTCCAAGTCCATGGCGGCACAAGTGCTATGTTTTCTCAGTAGTTaGATCAGAAGAAATGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNYYIIKFSKSMAAQVLCFLSS*IRRNGG Trigger: GCCTCCATTTCTTCTGATGCAACTACTGAGAAAACA...TAGCACTTGTGCCGCCATGGACTTGGAGAACTTAATAATGTAATAATTTAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | CACTGGCTTTGCAGCTGGCTCTCAGTACAGGACAGGTTGTCCACCTaGGACTGCAGAGCGCTGGACTCAGACTGCAGCTGCGCGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HWLCSWLSVQDRLST*DCRALDSDCSCAFL Trigger: TAAGAACGCGCAGCTGCAGTCTGAGTCCAGCGCTCTGCAGTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | CTCTCCAGATTACGGTTAGCCTGTCCCATCTGCTGGCACTGGCTTTaGAGCTGGCTCTCAGTACAGGACAGGTTGTCCACCTGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRLRLACPICWHWL*SWLSVQDRLSTWDC Trigger: GCAGTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | AGATTACGGTTAGCCTGTCCCATCTGCTGGCACTGGCTTTGCAGCTaGCTCTCAGTACAGGACAGGTTGTCCACCTGGGACTGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLRLACPICWHWLCS*LSVQDRLSTWDCRA Trigger: CGCTCTGCAGTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | TCCGGGCATGGGCTTTCTGTAGCCTCACTATCCTCTCAATCAGCATaGCTTTGTCCACTTCTGGGAAGTTGTCCACAGCCACCGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGHGLSVASLSSQSA*LCPLLGSCPQPPRS Trigger: GCTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTGAGGCTACAGAAAGCCCATGCCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS CCA 90 bp | TTGAGCAACTTGCTCTCCAGATTACGGTTAGCCTGTCCCATCTGCTaGCACTGGCTTTGCAGCTGGCTCTCAGTACAGGACAGGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSNLLSRLRLACPIC*HWLCSWLSVQDRLS Trigger: GGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAAGTTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | AGCTGCTTGCTGAGGTCCTTGACGTTAGAGGCGTGTTTGCGCCTCTaGGTCACTAACTCATCTTTCAGCTCTTCCACCTGGGTACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLLRSLTLEACLRL*VTNSSFSSSTWVLK Trigger: CTTGAGTACCCAGGTGGAAGAGCTGAAAGATGAGTTAGTGACGCAGAGGCGCAAACACGCCTCTAACGTCAAGGACCTCAGCAAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | TTGATTTCCAAAGAGAGCTCCAGTGTTAGCCCGCTGTCAGCGGGATaGGATGTGTACAAGGACGCCATGATGCCACCGCGTCTACTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LISKESSSVSPLSAG*DVYKDAMMPPRLLK Trigger: TTTGAGTAGACGCGGTGGCATCATGGCGTCCTTGTACACATCCCATCCCGCTGACAGCGGGCTAACACTGGAGCTCTCTTTGGAAATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAGAAGAACCTCAGAAACAAATCTACCCCAGGAGCGCGCCCTAAGTCAGCTGTGTCGTAGAGGCTaGCTGAGGCCGTCTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRRRTSETNLPQERALSQLCRRG*LRPSLD Trigger: ATCCAAAGACGGCCTCAGCAAGCCTCTACGACACAG...CTGACTTAGGGCGCGCTCCTGGGGTAGATTTGTTTCTGAGGTTCTTCTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCTCCACTTCTGGGAAGTaGTCCACAGCCACCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTSTSGK*STATEE Trigger: CTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGA...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS TCA 90 bp | CTCCCAACAAATCGTCTGAGGCTGAAACAGTCTTCATCTCGGAAATaGGTTTCCTGGTGCAGTCTGTGTCGTAGAGGCTTGCTGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPTNRLRLKQSSSRK*VSWCSLCRRGLLRP Trigger: CGGCCTCAGCAAGCCTCTACGACACAGACTGCACCAGGAAACTCATTTCCGAGATGAAGACTGTTTCAGCCTCAGACGATTTGTTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | TGTTTGCGCCTCTGCGTCACTAACTCATCTTTCAGCTCTTCCACCTaGGTACTCAAGGCTTTGACTTCGGTCTGCGCAGCAGAAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRLCVTNSSFSSST*VLKALTSVCAAESS Trigger: TGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGAGCTGAAAGATGAGTTAGTGACGCAGAGGCGCAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGCTCAAGAGATCCTCTTTAGCCTTCGAAGTAGCTAGGCCCACAGGGGTGTCTTCACATTTCTTATaGGCCTGGTCCATCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HELKRSSLAFEVARPTGVSSHFL*AWSIRW Trigger: CCAGCGGATGGACCAGGCCAATAAGAAATGTGAAGA...CACCCCTGTGGGCCTAGCTACTTCGAAGGCTAAAGAGGATCTCTTGAGCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCCTTCGATTCATAGAGTaGCTGCAGCCGCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTLRFIE*LQPPFL Trigger: GAGAAAGGGCGGCTGCAGCAACTCTATGAATCGAAG...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TACACACTGTCGTCTCAGGGTCTCTCCTCCACGTATTCTATGAGGAGAAGAACCACAGTTCTGCCGGATTaGCTCAGCTTCCTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLSSQGLSSTYSMRRRTTVLPD*LSFLLC Trigger: GCAAAGGAGGAAGCTGAGCAAATCCGGCAGAACTGT...GGTTCTTCTCCTCATAGAATACGTGGAGGAGAGACCCTGAGACGACAGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | TCTTTCAGCTCTTCCACCTGGGTACTCAAGGCTTTGACTTCGGTCTaGGCAGCAGAAAGCTCAGCTTGCAGAGTCTGTACTTCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSSSTWVLKALTSV*AAESSACRVCTSSF Trigger: AAAAGAGGAAGTACAGACTCTGCAAGCTGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGAGCTGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTATCCACTTCTGGGAAGTaGTCCACAGCCACCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLCCENGERLHDERLSLSTSGK*STATEE Trigger: CTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGA...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS CCA 90 bp | AGGGCTAAGGCCTGTTCTCCTTTATTCAGTCCATTTGGGACTTGGTaGCCCTCTGCAAACTCAGCAGATAAGAGCTCAGATTCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAKACSPLFSPFGTW*PSANSADKSSDSIS Trigger: AGAAATCGAATCTGAGCTCTTATCTGCTGAGTTTGCAGAGGGCCACCAAGTCCCAAATGGACTGAATAAAGGAGAACAGGCCTTAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTATTCAGTCCATTaGGGACTTGGTGGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCCENGERLHDERLSLGRLYSVH*GLGGPL Trigger: CAGAGGGCCACCAAGTCCCAAATGGACTGAATAAAG...TCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | TGGGATGTGTACAAGGACGCCATGATGCCACCGCGTCTACTCAAATaGACTTTGTTAAAATCAGATGCTTCTGAGGAAAGTGTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WDVYKDAMMPPRLLK*TLLKSDASEESVPD Trigger: ATCAGGCACACTTTCCTCAGAAGCATCTGATTTTAACAAAGTGCATTTGAGTAGACGCGGTGGCATCATGGCGTCCTTGTACACATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CAA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCCATACTTCATTACCATaGCCTCCTTTTCCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: CENGERLHDERLSLGRLFHTSLP*PPFPDG Trigger: CCCGTCAGGAAAAGGAGGCAATGGTAATGAAGTATG...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | ACTCATTTCAGGAGCACGGAACAGGCACCAGTCAAGCGGTTACGAAATGCTAAAGCCTGTAATTTTCGGTaGATTTCCAAAGAGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: THFRSTEQAPVKRLRNAKACNFR*ISKESS Trigger: GGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGC...TTTAGCATTTCGTAACCGCTTGACTGGTGCCTGTTCCGTGCTCCTGAAATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | TGTCAGAGTCCAATGACAATAGTTCAGCTCCTGTTTCTAATCTGCTaGTTTCGTCACCAGAAACTGAGATGCACGAGTCATCCCTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: CQSPMTIVQLLFLIC*FRHQKLRCTSHPST Trigger: AGTTGAGGGATGACTCGTGCATCTCAGTTTCTGGTGACGAAAGCAGCAGATTAGAAACAGGAGCTGAACTATTGTCATTGGACTCTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS GCA 90 bp | TTCTGTCAGAGTCCAATGACAATAGTTCAGCTCCTGTTTCTAATCTaGTGCTTTCGTCACCAGAAACTGAGATGCACGAGTCATCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCQSPMTIVQLLFLI*CFRHQKLRCTSHPS Trigger: TGAGGGATGACTCGTGCATCTCAGTTTCTGGTGACGAAAGCAGCAGATTAGAAACAGGAGCTGAACTATTGTCATTGGACTCTGACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 90 bp | TTGATGTGGTCCTCCATGAATTCTATTTTCTCATTCTTCCGGGCATaGGCTTTCTGTAGCCTCACTATCCTCTCAATCAGCATGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LMWSSMNSIFSFFRA*AFCSLTILSISMAL Trigger: CAAAGCCATGCTGATTGAGAGGATAGTGAGGCTACAGAAAGCCCATGCCCGGAAGAATGAGAAAATAGAATTCATGGAGGACCACATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTCTTCAACCAGCTGTTaGATGTGGTCCTCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CCENGERLHDERLSLGRLSSTSC*MWSSMN Trigger: ATTCATGGAGGACCACATCAAACAGCTGGTTGAAGA...AAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS-3UTR CAA 90 bp | TGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTAGGAAGACTTTTCGCCTGTAATTTTCGGTaGATTTCCAAAGAGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CENGERLHDERLSLGRLFACNFR*ISKESS Trigger: GGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGC...GAAAAGTCTTCCTAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118592.8 ENSMUST00000135666.8 |
||
| CDS CCA 90 bp | TGTAAAGTCTCCACCAGGAAAGTCATCTATTTGTCCAGAATCTTCTaGGCATGTGTCTGTGTTAGCACAAGAATTCTCACCACTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CKVSTRKVIYLSRIF*ACVCVSTRILTTAT Trigger: TGTGGCAGTGGTGAGAATTCTTGTGCTAACACAGACACATGCCCAGAAGATTCTGGACAAATAGATGACTTTCCTGGTGGAGACTTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TACACAATGTCAGTAAAACCAAGGCATGGCAGAAAGCACCTCAGCCCCAGAGCTATTTCAGCTTTTAACTaGTTTTGCGCCCACTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: YTMSVKPRHGRKHLSPRAISAFN*FCAHFT Trigger: AGTAAAGTGGGCGCAAAACAAGTTAAAAGCTGAAAT...AGCTCTGGGGCTGAGGTGCTTTCTGCCATGCCTTGGTTTTACTGACATTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCTGAGCTCACAAAGCTCACGGCACACACACCACACACCCATTCATAAATTATCTTTGGTTTCCTaGTGTGAGTCCATTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSQSSRHTHHTPIHKLSLVS*CESISA Trigger: AGCTGAAATGGACTCACACAAGGAAACCAAAGATAA...TTTATGAATGGGTGTGTGGTGTGTGTGCCGTGAGCTTTGTGAGCTCAGCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS TCA 90 bp | CTCAGTAGTTGCATCAGAAGAAATGGAGGCTATGTGTTCTGTCTCTaGCATGCTGACTGGCACCAATTCACTTTGCATTTCTTCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSCIRRNGGYVFCL*HADWHQFTLHFFKS Trigger: AGATTTGAAGAAATGCAAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAGAACACATAGCCTCCATTTCTTCTGATGCAACTACTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATGATGAACGCCTCTCTTTATCTTTCTGGAGGTCATaGATCAAAGAATTAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSLCCENGERLHDERLSLSFWRS*IKELRL Trigger: AAGCCTTAATTCTTTGATCAATGACCTCCAGAAAGA...TAAAGAGAGGCGTTCATCATGCAACCGCTCACCATTTTCGCAACACAAAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGAGCTCATACCATTCTTTAAAGCTATGTATCCTAAAGCCCAAGTTCTTTCTTCAACCAGCTGTTaGATGTGGTCCTCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLELIPFFKAMYPKAQVLSSTSC*MWSSMN Trigger: ATTCATGGAGGACCACATCAAACAGCTGGTTGAAGA...AAGAACTTGGGCTTTAGGATACATAGCTTTAAAGAATGGTATGAGCTCTAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS-3UTR CAA 90 bp | TTTATAATTCCTCTAGATTTCTCTTTGTGTTGCGAAAATGGTGAGCGGTTGCATTCTTTGAGTTTATCTTaGGTTTCCTTGTGTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIIPLDFSLCCENGERLHSLSLS*VSLCES Trigger: GGACTCACACAAGGAAACCAAAGATAAACTCAAAGA...ATGCAACCGCTCACCATTTTCGCAACACAAAGAGAAATCTAGAGGAATTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118592.8 |
||
| CDS GCA 72 bp | TGGCTCTCAGTACAGGACAGGTTGTCCACCTGGGACTaGAGAGCGCTGGACTCAGACTGCAGCTGCGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WLSVQDRLSTWD*RALDSDCSCAF Trigger: GAACGCGCAGCTGCAGTCTGAGTCCAGCGCTCTGCAGTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CAA 90 bp | ATCTGCTGGCACTGGCTTTGCAGCTGGCTCTCAGTACAGGACAGGTaGTCCACCTGGGACTGCAGAGCGCTGGACTCAGACTGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICWHWLCSWLSVQDR*STWDCRALDSDCSC Trigger: GCAGCTGCAGTCTGAGTCCAGCGCTCTGCAGTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS TCA 72 bp | GAGTTTCCTGGTGCAGTCTGTGTCGTAGAGGCTTGCTaGGGCCGTCTTTGGATTAGCGGCTTCTGCGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: EFPGAVCVVEAC*GRLWISGFCGC Trigger: GCACCCGCAGAAGCCGCTAATCCAAAGACGGCCTCAGCAAGCCTCTACGACACAGACTGCACCAGGAAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 72 bp | TTAGCCTGTCCCATCTGCTGGCACTGGCTTTGCAGCTaGCTCTCAGTACAGGACAGGTTGTCCACCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LACPICWHWLCS*LSVQDRLSTWD Trigger: GTCCCAGGTGGACAACCTGTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
||
| CDS CCA 72 bp | AAAGAGAGCTCCAGTGTTAGCCCGCTGTCAGCGGGATaGGATGTGTACAAGGACGCCATGATGCCACCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: KESSSVSPLSAG*DVYKDAMMPPR Trigger: ACGCGGTGGCATCATGGCGTCCTTGTACACATCCCATCCCGCTGACAGCGGGCTAACACTGGAGCTCTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CCA 72 bp | TTGCTCTCCAGATTACGGTTAGCCTGTCCCATCTGCTaGCACTGGCTTTGCAGCTGGCTCTCAGTACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSRLRLACPIC*HWLCSWLSVQD Trigger: GTCCTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | AACTTGCTCTCCAGATTACGGTTAGCCTGTCCCATCTaGTGGCACTGGCTTTGCAGCTGGCTCTCAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: NLLSRLRLACPI*WHWLCSWLSVQ Trigger: CTGTACTGAGAGCCAGCTGCAAAGCCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | CTGAGGTCCTTGACGTTAGAGGCGTGTTTGCGCCTCTaGGTCACTAACTCATCTTTCAGCTCTTCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LRSLTLEACLRL*VTNSSFSSSTW Trigger: CCAGGTGGAAGAGCTGAAAGATGAGTTAGTGACGCAGAGGCGCAAACACGCCTCTAACGTCAAGGACCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 90 bp | GCATGGGCTTTCTGTAGCCTCACTATCCTCTCAATCAGCATGGCTTaGTCCACTTCTGGGAAGTTGTCCACAGCCACCGAGGAGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: AWAFCSLTILSISMA*STSGKLSTATEELV Trigger: TACCAGCTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTGAGGCTACAGAAAGCCCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS GCA 72 bp | TCTTCCACCTGGGTACTCAAGGCTTTGACTTCGGTCTaGGCAGCAGAAAGCTCAGCTTGCAGAGTCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: SSTWVLKALTSV*AAESSACRVCT Trigger: AGTACAGACTCTGCAAGCTGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CCA 72 bp | CTCTGCGTCACTAACTCATCTTTCAGCTCTTCCACCTaGGTACTCAAGGCTTTGACTTCGGTCTGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LCVTNSSFSSST*VLKALTSVCAA Trigger: TGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGAGCTGAAAGATGAGTTAGTGACGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | TCATCTTTCAGCTCTTCCACCTGGGTACTCAAGGCTTaGACTTCGGTCTGCGCAGCAGAAAGCTCAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSFSSSTWVLKA*TSVCAAESSAC Trigger: GCAAGCTGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGAGCTGAAAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | AGCTGCTTGCTGAGGTCCTTGACGTTAGAGGCGTGTTaGCGCCTCTGCGTCACTAACTCATCTTTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SCLLRSLTLEAC*RLCVTNSSFSS Trigger: AGAGCTGAAAGATGAGTTAGTGACGCAGAGGCGCAAACACGCCTCTAACGTCAAGGACCTCAGCAAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | CTCTCAATCAGCATGGCTTTGTCCACTTCTGGGAAGTaGTCCACAGCCACCGAGGAGCTGGTATTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSISMALSTSGK*STATEELVFSG Trigger: TCCAGAGAATACCAGCTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CAA 90 bp | CTCACTATCCTCTCAATCAGCATGGCTTTGTCCACTTCTGGGAAGTaGTCCACAGCCACCGAGGAGCTGGTATTCTCTGGAGATCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LTILSISMALSTSGK*STATEELVFSGDRS Trigger: AGACCGATCTCCAGAGAATACCAGCTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CAA 90 bp | GTCACTAACTCATCTTTCAGCTCTTCCACCTGGGTACTCAAGGCTTaGACTTCGGTCTGCGCAGCAGAAAGCTCAGCTTGCAGAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VTNSSFSSSTWVLKA*TSVCAAESSACRVC Trigger: ACAGACTCTGCAAGCTGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACCCAGGTGGAAGAGCTGAAAGATGAGTTAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CCA 72 bp | CACTATCCTCTCAATCAGCATGGCTTTGTCCACTTCTaGGAAGTTGTCCACAGCCACCGAGGAGCTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: HYPLNQHGFVHF*EVVHSHRGAGI Trigger: AATACCAGCTCCTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CCA 72 bp | GGGCTTTCTGTAGCCTCACTATCCTCTCAATCAGCATaGCTTTGTCCACTTCTGGGAAGTTGTCCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GLSVASLSSQSA*LCPLLGSCPQP Trigger: TGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTGAGGCTACAGAAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CAA 72 bp | TTCTGTAGCCTCACTATCCTCTCAATCAGCATGGCTTaGTCCACTTCTGGGAAGTTGTCCACAGCCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: FCSLTILSISMA*STSGKLSTATE Trigger: CTCGGTGGCTGTGGACAACTTCCCAGAAGTGGACAAAGCCATGCTGATTGAGAGGATAGTGAGGCTACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS CAA 90 bp | GCAGGTCTAGAGCCTCCTTCTCGCCTCTCACATACTTCATTACCATaGCCTCCTTTTCCTGACGGGCCTCTTCACATTTCTTATTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AGLEPPSRLSHTSLP*PPFPDGPLHISYWP Trigger: AGGCCAATAAGAAATGTGAAGAGGCCCGTCAGGAAAAGGAGGCAATGGTAATGAAGTATGTGAGAGGCGAGAAGGAGGCTCTAGACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 90 bp | AGAGTCTGTACTTCCTCTTTTCGAAGCTCTTCCTCTTTGAGCAACTaGCTCTCCAGATTACGGTTAGCCTGTCCCATCTGCTGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: RVCTSSFRSSSSLSN*LSRLRLACPICWHW Trigger: CCAGTGCCAGCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAAGTTGCTCAAAGAGGAAGAGCTTCGAAAAGAGGAAGTACAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 90 bp | GGTACTCAAGGCTTTGACTTCGGTCTGCGCAGCAGAAAGCTCAGCTaGCAGAGTCTGTACTTCCTCTTTTCGAAGCTCTTCCTCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GTQGFDFGLRSRKLS*QSLYFLFSKLFLFE Trigger: CTCAAAGAGGAAGAGCTTCGAAAAGAGGAAGTACAGACTCTGCAAGCTGAGCTTTCTGCTGCGCAGACCGAAGTCAAAGCCTTGAGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | TGTTTAACAGTGAGCTCCTGCTGCAAGTACCTGCTGTaGACACACTTCTCAAACAGGGCTAAGGCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: CLTVSSCCKYLL*THFSNRAKACS Trigger: AGAACAGGCCTTAGCCCTGTTTGAGAAGTGTGTGCACAGCAGGTACTTGCAGCAGGAGCTCACTGTTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | ACAGGGCTAAGGCCTGTTCTCCTTTATTCAGTCCATTaGGGACTTGGTGGCCCTCTGCAAACTCAGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: TGLRPVLLYSVH*GLGGPLQTQQI Trigger: TATCTGCTGAGTTTGCAGAGGGCCACCAAGTCCCAAATGGACTGAATAAAGGAGAACAGGCCTTAGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | GGCCTGGTCCATCCGCTGGGCCATCTCTTTATGGATTaGCTGAATTGCATTTTTAGCTGTGACATCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GLVHPLGHLFMD*LNCIFSCDILC Trigger: GCACAGGATGTCACAGCTAAAAATGCAATTCAGCAAATCCATAAAGAGATGGCCCAGCGGATGGACCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | GAGCCTCCTTCTCGCCTCTCACATACTTCATTACCATaGCCTCCTTTTCCTGACGGGCCTCTTCACATTTCT | + |
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Preference number: 6 (lower is better) Translates to: EPPSRLSHTSLP*PPFPDGPLHIS Trigger: AGAAATGTGAAGAGGCCCGTCAGGAAAAGGAGGCAATGGTAATGAAGTATGTGAGAGGCGAGAAGGAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | GAGTCTAGTTGTTTCACCTTCCTTCGATTCATAGAGTaGCTGCAGCCGCCCTTTCTCCTGAGACAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ESSCFTFLRFIE*LQPPFLLRQLL Trigger: AAGCAGCTGTCTCAGGAGAAAGGGCGGCTGCAGCAACTCTATGAATCGAAGGAAGGTGAAACAACTAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 90 bp | TCAGCTTGCAGAGTCTGTACTTCCTCTTTTCGAAGCTCTTCCTCTTaGAGCAACTTGCTCTCCAGATTACGGTTAGCCTGTCCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SACRVCTSSFRSSSS*SNLLSRLRLACPIC Trigger: GCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAAGTTGCTCAAAGAGGAAGAGCTTCGAAAAGAGGAAGTACAGACTCTGCAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS TCA 72 bp | AATCGTCTGAGGCTGAAACAGTCTTCATCTCGGAAATaGGTTTCCTGGTGCAGTCTGTGTCGTAGAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: NRLRLKQSSSRK*VSWCSLCRRGL Trigger: CAAGCCTCTACGACACAGACTGCACCAGGAAACTCATTTCCGAGATGAAGACTGTTTCAGCCTCAGACGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | AGCCTCCTTCTCGCCTCTCACATACTTCATTACCATTaGCTCCTTTTCCTGACGGGCCTCTTCACATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLLLASHILHYH*LLFLTGLFTFL Trigger: AAGAAATGTGAAGAGGCCCGTCAGGAAAAGGAGGCAATGGTAATGAAGTATGTGAGAGGCGAGAAGGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CCA 72 bp | GCCTGTTCTCCTTTATTCAGTCCATTTGGGACTTGGTaGCCCTCTGCAAACTCAGCAGATAAGAGCTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ACSPLFSPFGTW*PSANSADKSSD Trigger: ATCTGAGCTCTTATCTGCTGAGTTTGCAGAGGGCCACCAAGTCCCAAATGGACTGAATAAAGGAGAACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | ACTTCCTCTTTTCGAAGCTCTTCCTCTTTGAGCAACTaGCTCTCCAGATTACGGTTAGCCTGTCCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSSFRSSSSLSN*LSRLRLACPIC Trigger: GCAGATGGGACAGGCTAACCGTAATCTGGAGAGCAAGTTGCTCAAAGAGGAAGAGCTTCGAAAAGAGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS TCA 72 bp | TGGTCCATCCGCTGGGCCATCTCTTTATGGATTTGCTaGATTGCATTTTTAGCTGTGACATCCTGTGCGACT | + |
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Preference number: 6 (lower is better) Translates to: WSIRWAISLWIC*IAFLAVTSCAT Trigger: AGTCGCACAGGATGTCACAGCTAAAAATGCAATTCAGCAAATCCATAAAGAGATGGCCCAGCGGATGGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | CGAGTCATCCCTCAACTCCGATGTTTTCTCAGTAGTTaGATCAGAAGAAATGGAGGCTATGTGTTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RVIPQLRCFLSS*IRRNGGYVFCL Trigger: GAGACAGAACACATAGCCTCCATTTCTTCTGATGCAACTACTGAGAAAACATCGGAGTTGAGGGATGACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CCA 72 bp | CTCGAGCGACTTCCCATACTGCTAATGTCTTTATCGTaGTTTCCATTCTCAGTCTGCTCTAACTTTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: LERLPILLMSLS*FPFSVCSNFLR Trigger: TCGGAGAAAGTTAGAGCAGACTGAGAATGGAAACCACGATAAAGACATTAGCAGTATGGGAAGTCGCTCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | AGAGTCTGTACTTCCTCTTTTCGAAGCTCTTCCTCTTaGAGCAACTTGCTCTCCAGATTACGGTTAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RVCTSSFRSSSS*SNLLSRLRLAC Trigger: ACAGGCTAACCGTAATCTGGAGAGCAAGTTGCTCAAAGAGGAAGAGCTTCGAAAAGAGGAAGTACAGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS TCA 72 bp | TGCATCAGAAGAAATGGAGGCTATGTGTTCTGTCTCTaGCATGCTGACTGGCACCAATTCACTTTGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: CIRRNGGYVFCL*HADWHQFTLHF Trigger: GAAATGCAAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAGAACACATAGCCTCCATTTCTTCTGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS TCA 72 bp | GCAATGTATCTTCCAAAACAGCCTGTAATTTTCGGTTaGTTTCCAAAGAGAGCTCCAGTGTTAGCCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AMYLPKQPVIFG*FPKRAPVLARC Trigger: ACAGCGGGCTAACACTGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGCTGTTTTGGAAGATACATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 ENSMUST00000135666.8 |
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| CDS GCA 72 bp | CCAATGACAATAGTTCAGCTCCTGTTTCTAATCTGCTaGTTTCGTCACCAGAAACTGAGATGCACGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PMTIVQLLFLIC*FRHQKLRCTSH Trigger: ATGACTCGTGCATCTCAGTTTCTGGTGACGAAAGCAGCAGATTAGAAACAGGAGCTGAACTATTGTCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS GCA 72 bp | AGTCCAATGACAATAGTTCAGCTCCTGTTTCTAATCTaGTGCTTTCGTCACCAGAAACTGAGATGCACGAGT | + |
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Preference number: 6 (lower is better) Translates to: SPMTIVQLLFLI*CFRHQKLRCTS Trigger: ACTCGTGCATCTCAGTTTCTGGTGACGAAAGCAGCAGATTAGAAACAGGAGCTGAACTATTGTCATTGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | TCTGCCAGTATCTGTGTTACTGTCTGTTCTGGCTCCTaGGTTTTTGACACTTGTTCTGTAAAGTCTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: SASICVTVCSGS*VFDTCSVKSPP Trigger: TGGTGGAGACTTTACAGAACAAGTGTCAAAAACCAAGGAGCCAGAACAGACAGTAACACAGATACTGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 90 bp | GACTTTAACTCTGCCAGTATCTGTGTTACTGTCTGTTCTGGCTCCTaGGTTTTTGACACTTGTTCTGTAAAGTCTCCACCAGGAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: DFNSASICVTVCSGS*VFDTCSVKSPPGKS Trigger: TGACTTTCCTGGTGGAGACTTTACAGAACAAGTGTCAAAAACCAAGGAGCCAGAACAGACAGTAACACAGATACTGGCAGAGTTAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CCA 72 bp | CAGTTCTGCCGGATTTGCTCAGCTTCCTCCTTTGCCTaGGTTAGTTTTGTAGTTGTTTCTTTGAGTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: QFCRICSASSFA*VSFVVVSLSLS Trigger: AGATAAACTCAAAGAAACAACTACAAAACTAACCCAGGCAAAGGAGGAAGCTGAGCAAATCCGGCAGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS CAA 72 bp | TTGTTCTGTAAAGTCTCCACCAGGAAAGTCATCTATTaGTCCAGAATCTTCTGGGCATGTGTCTGTGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LFCKVSTRKVIY*SRIFWACVCVS Trigger: GCTAACACAGACACATGCCCAGAAGATTCTGGACAAATAGATGACTTTCCTGGTGGAGACTTTACAGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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| CDS TCA 72 bp | AAGAAATGGAGGCTATGTGTTCTGTCTCTGACATGCTaGCTGGCACCAATTCACTTTGCATTTCTTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: KKWRLCVLSLTC*LAPIHFAFLQI Trigger: GATTTGAAGAAATGCAAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAGAACACATAGCCTCCATTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076085.4 ENSMUST00000118592.8 |
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